AlfalfaGEDB | MS.gene78324

M. sativa cultivar XinJiangDaYe / MS.gene78324

KEGG: K11251
GO: GO:0000786 GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005515 GO:0005575 GO:0005634 GO:0032991 GO:0032993 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044815 GO:0046982 GO:0046983 GO:0097159 GO:0110165 GO:1901363
PFAM: PF00125.27 PF16211.8

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene78324.t1	RHN49328.1	100	139	0	0	1	139	57	195	4.40E-67	263.8

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene78324.t1	O65759	97.1	139	4	0	1	139	1	139	1.3e-67	256.9

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene78324.t1	A2Q3H4	100.0	139	0	0	1	139	1	139	3.1e-67	263.8

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene82426	MS.gene78324	PPI
MS.gene066535	MS.gene78324	PPI
MS.gene038612	MS.gene78324	PPI
MS.gene78324	MS.gene29300	PPI
MS.gene027907	MS.gene78324	PPI
MS.gene78324	MS.gene072432	PPI
MS.gene28303	MS.gene78324	PPI
MS.gene78322	MS.gene78324	PPI
MS.gene028153	MS.gene78324	PPI
MS.gene64164	MS.gene78324	PPI
MS.gene99744	MS.gene78324	PPI
MS.gene28304	MS.gene78324	PPI
MS.gene58116	MS.gene78324	PPI
MS.gene030661	MS.gene78324	PPI
MS.gene52173	MS.gene78324	PPI
MS.gene045235	MS.gene78324	PPI
MS.gene02591	MS.gene78324	PPI
MS.gene87262	MS.gene78324	PPI
MS.gene029242	MS.gene78324	PPI
MS.gene023799	MS.gene78324	PPI
MS.gene062778	MS.gene78324	PPI
MS.gene42236	MS.gene78324	PPI
MS.gene28432	MS.gene78324	PPI
MS.gene017431	MS.gene78324	PPI
MS.gene033382	MS.gene78324	PPI
MS.gene92710	MS.gene78324	PPI
MS.gene97703	MS.gene78324	PPI
MS.gene056617	MS.gene78324	PPI
MS.gene70258	MS.gene78324	PPI
MS.gene06859	MS.gene78324	PPI
MS.gene044021	MS.gene78324	PPI
MS.gene68979	MS.gene78324	PPI
MS.gene91631	MS.gene78324	PPI
MS.gene050290	MS.gene78324	PPI
MS.gene038800	MS.gene78324	PPI
MS.gene021887	MS.gene78324	PPI
MS.gene009155	MS.gene78324	PPI
MS.gene020313	MS.gene78324	PPI
MS.gene75575	MS.gene78324	PPI
MS.gene78323	MS.gene78324	PPI
MS.gene26084	MS.gene78324	PPI
MS.gene013822	MS.gene78324	PPI
MS.gene013534	MS.gene78324	PPI
MS.gene39538	MS.gene78324	PPI
MS.gene29299	MS.gene78324	PPI
MS.gene045232	MS.gene78324	PPI
MS.gene035097	MS.gene78324	PPI
MS.gene78922	MS.gene78324	PPI
MS.gene83444	MS.gene78324	PPI
MS.gene071851	MS.gene78324	PPI
MS.gene051008	MS.gene78324	PPI
MS.gene47573	MS.gene78324	PPI
MS.gene78224	MS.gene78324	PPI
MS.gene50129	MS.gene78324	PPI
MS.gene32513	MS.gene78324	PPI
MS.gene050252	MS.gene78324	PPI
MS.gene28434	MS.gene78324	PPI
MS.gene45448	MS.gene78324	PPI
MS.gene70261	MS.gene78324	PPI
MS.gene034846	MS.gene78324	PPI
MS.gene77911	MS.gene78324	PPI
MS.gene066536	MS.gene78324	PPI
MS.gene065496	MS.gene78324	PPI
MS.gene066537	MS.gene78324	PPI
MS.gene97701	MS.gene78324	PPI
MS.gene78112	MS.gene78324	PPI
MS.gene057458	MS.gene78324	PPI
MS.gene24706	MS.gene78324	PPI
MS.gene067033	MS.gene78324	PPI
MS.gene030664	MS.gene78324	PPI
MS.gene29298	MS.gene78324	PPI
MS.gene27326	MS.gene78324	PPI
MS.gene27648	MS.gene78324	PPI
MS.gene059054	MS.gene78324	PPI
MS.gene29521	MS.gene78324	PPI
MS.gene06645	MS.gene78324	PPI
MS.gene70990	MS.gene78324	PPI
MS.gene018762	MS.gene78324	PPI
MS.gene05905	MS.gene78324	PPI
MS.gene056257	MS.gene78324	PPI
MS.gene068178	MS.gene78324	PPI
MS.gene32514	MS.gene78324	PPI
MS.gene72768	MS.gene78324	PPI
MS.gene044591	MS.gene78324	PPI
MS.gene81765	MS.gene78324	PPI
MS.gene66051	MS.gene78324	PPI
MS.gene027909	MS.gene78324	PPI
MS.gene78324	MS.gene066536	PPI
MS.gene054186	MS.gene78324	PPI
MS.gene04820	MS.gene78324	PPI
MS.gene038409	MS.gene78324	PPI
MS.gene072433	MS.gene78324	PPI
MS.gene08465	MS.gene78324	PPI
MS.gene81051	MS.gene78324	PPI
MS.gene017174	MS.gene78324	PPI
MS.gene26950	MS.gene78324	PPI
MS.gene001986	MS.gene78324	PPI
MS.gene030666	MS.gene78324	PPI
MS.gene23886	MS.gene78324	PPI
MS.gene46303	MS.gene78324	PPI
MS.gene045233	MS.gene78324	PPI
MS.gene045065	MS.gene78324	PPI
MS.gene059422	MS.gene78324	PPI
MS.gene67108	MS.gene78324	PPI
MS.gene049111	MS.gene78324	PPI
MS.gene027904	MS.gene78324	PPI
MS.gene056896	MS.gene78324	PPI
MS.gene75426	MS.gene78324	PPI
MS.gene00233	MS.gene78324	PPI
MS.gene70263	MS.gene78324	PPI
MS.gene037324	MS.gene78324	PPI
MS.gene03801	MS.gene78324	PPI
MS.gene072431	MS.gene78324	PPI
MS.gene29300	MS.gene78324	PPI
MS.gene28438	MS.gene78324	PPI
MS.gene72993	MS.gene78324	PPI
MS.gene62799	MS.gene78324	PPI
MS.gene04748	MS.gene78324	PPI
MS.gene79130	MS.gene78324	PPI
MS.gene033017	MS.gene78324	PPI
MS.gene062301	MS.gene78324	PPI
MS.gene65125	MS.gene78324	PPI
MS.gene044498	MS.gene78324	PPI
MS.gene031283	MS.gene78324	PPI
MS.gene41916	MS.gene78324	PPI
MS.gene072432	MS.gene78324	PPI
MS.gene95527	MS.gene78324	PPI
MS.gene29445	MS.gene78324	PPI
MS.gene26406	MS.gene78324	PPI
MS.gene007189	MS.gene78324	PPI
MS.gene58112	MS.gene78324	PPI
MS.gene89203	MS.gene78324	PPI
MS.gene056335	MS.gene78324	PPI
MS.gene068179	MS.gene78324	PPI
MS.gene92245	MS.gene78324	PPI
MS.gene24295	MS.gene78324	PPI
MS.gene015760	MS.gene78324	PPI
MS.gene58114	MS.gene78324	PPI
MS.gene78227	MS.gene78324	PPI
MS.gene057206	MS.gene78324	PPI
MS.gene003846	MS.gene78324	PPI
MS.gene78924	MS.gene78324	PPI
MS.gene58285	MS.gene78324	PPI
MS.gene07616	MS.gene78324	PPI
MS.gene24383	MS.gene78324	PPI
MS.gene46640	MS.gene78324	PPI
MS.gene60922	MS.gene78324	PPI
MS.gene011421	MS.gene78324	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene78324.t1	MTR_7g114060	100.000	139	0	0	1	139	1	139	3.00e-97	276
MS.gene78324.t1	MTR_7g114040	100.000	139	0	0	1	139	1	139	3.00e-97	276
MS.gene78324.t1	MTR_7g108320	95.775	142	3	1	1	139	1	142	4.40e-93	265
MS.gene78324.t1	MTR_7g093910	87.313	134	17	0	6	139	9	142	6.22e-82	237
MS.gene78324.t1	MTR_7g114050	87.023	131	6	2	9	139	11	130	3.86e-72	212
MS.gene78324.t1	MTR_2g082510	86.777	121	12	1	10	126	3	123	3.42e-69	204
MS.gene78324.t1	MTR_2g082220	84.921	126	11	2	10	129	3	126	4.30e-69	204
MS.gene78324.t1	MTR_2g096610	75.000	120	30	0	18	137	21	140	1.15e-59	181
MS.gene78324.t1	MTR_7g113160	76.068	117	28	0	9	125	16	132	3.78e-59	179
MS.gene78324.t1	MTR_4g063280	79.091	110	23	0	18	127	17	126	2.93e-58	177
MS.gene78324.t1	MTR_2g096570	81.132	106	20	0	19	124	23	128	5.36e-58	177
MS.gene78324.t1	MTR_4g063410	79.439	107	22	0	19	125	24	130	5.44e-58	177
MS.gene78324.t1	MTR_4g071150	80.374	107	21	0	19	125	24	130	6.46e-58	177
MS.gene78324.t1	MTR_4g064005	81.132	106	20	0	19	124	24	129	6.49e-58	177
MS.gene78324.t1	MTR_8g086640	81.132	106	20	0	19	124	24	129	7.30e-58	177
MS.gene78324.t1	MTR_4g064967	81.132	106	20	0	19	124	24	129	8.16e-58	176
MS.gene78324.t1	MTR_6g005150	61.345	119	37	2	19	136	26	136	5.87e-42	136
MS.gene78324.t1	MTR_1g011750	58.197	122	49	2	3	123	10	130	1.06e-39	130
MS.gene78324.t1	MTR_1g011850	58.197	122	49	2	3	123	10	130	1.06e-39	130
MS.gene78324.t1	MTR_1g114050	62.857	105	37	2	20	123	24	127	5.35e-38	125
MS.gene78324.t1	MTR_1g071040	63.462	104	36	2	21	123	28	130	1.15e-37	125
MS.gene78324.t1	MTR_4g063300	67.708	96	23	1	40	127	10	105	7.05e-36	120
MS.gene78324.t1	MTR_4g005910	88.889	45	5	0	82	126	4	48	6.44e-23	85.5
MS.gene78324.t1	MTR_7g010440	54.444	90	41	0	47	136	96	185	2.92e-22	89.7
MS.gene78324.t1	MTR_4g048490	44.860	107	30	2	19	125	26	103	2.83e-20	80.1
MS.gene78324.t1	MTR_1g069770	55.224	67	30	0	62	128	32	98	1.19e-18	75.9
MS.gene78324.t1	MTR_7g027610	41.818	110	32	3	18	123	13	94	8.02e-16	68.9
MS.gene78324.t1	MTR_0653s0030	52.830	53	25	0	50	102	43	95	4.63e-12	60.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene78324.t1	AT1G54690	92.958	142	7	1	1	139	1	142	2.22e-90	258
MS.gene78324.t1	AT1G08880	94.118	136	8	0	4	139	7	142	5.41e-90	258
MS.gene78324.t1	AT4G27230	86.290	124	13	1	10	129	3	126	4.66e-70	207
MS.gene78324.t1	AT4G27230	86.290	124	13	1	10	129	3	126	4.66e-70	207
MS.gene78324.t1	AT5G54640	82.946	129	19	1	1	129	1	126	1.59e-69	205
MS.gene78324.t1	AT1G51060	83.871	124	16	1	10	129	3	126	1.51e-68	203
MS.gene78324.t1	AT3G20670	84.677	124	15	1	10	129	3	126	4.76e-68	202
MS.gene78324.t1	AT5G59870	73.643	129	29	2	1	124	1	129	1.24e-60	184
MS.gene78324.t1	AT5G27670	73.438	128	29	1	2	124	3	130	4.78e-58	177
MS.gene78324.t1	AT5G02560	79.439	107	22	0	18	124	23	129	5.23e-57	174
MS.gene78324.t1	AT5G02560	64.885	131	22	1	18	124	23	153	1.37e-51	162
MS.gene78324.t1	AT2G38810	62.617	107	38	2	18	123	27	132	1.12e-38	127
MS.gene78324.t1	AT2G38810	62.617	107	38	2	18	123	27	132	1.12e-38	127
MS.gene78324.t1	AT2G38810	62.617	107	38	2	18	123	27	132	1.12e-38	127
MS.gene78324.t1	AT2G38810	62.617	107	38	2	18	123	27	132	1.12e-38	127
MS.gene78324.t1	AT1G52740	61.905	105	38	2	20	123	27	130	2.42e-38	127
MS.gene78324.t1	AT3G54560	60.952	105	39	2	20	123	29	132	4.94e-37	123
MS.gene78324.t1	AT3G54560	60.952	105	39	2	20	123	29	132	4.94e-37	123
MS.gene78324.t1	AT4G13570	43.220	118	65	2	1	117	2	118	3.98e-23	87.8
MS.gene78324.t1	AT4G13570	49.451	91	44	2	28	117	35	124	9.39e-22	84.3

Find 49 sgRNAs with CRISPR-Local

Find 61 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTGCCCTTTCCAACCTTCTT+AGG	0.222545	7.4:-2864385	None:intergenic
ATCTGCTTCTCAAGAATTCT+AGG	0.264115	7.4:+2864420	MS.gene78324:CDS
TGAAGAACTCAGCAAGCTTT+TGG	0.286717	7.4:+2864306	MS.gene78324:CDS
GAAACTGATTTGGCAGCCTT+TGG	0.309618	7.4:-2863961	None:intergenic
TGAAGATCTTGAAACTGATT+TGG	0.311823	7.4:-2863971	None:intergenic
AACACGTTCGGCGTATTTAC+CGG	0.321195	7.4:-2864043	None:intergenic
GGAAAGGGCAAAGGAGAAAT+TGG	0.326882	7.4:+2864397	MS.gene78324:CDS
AGCAAAGTCTGATGAATATT+AGG	0.347792	7.4:-2864361	None:intergenic
TCAGACTTTGCTACCTAAGA+AGG	0.421667	7.4:+2864372	MS.gene78324:CDS
GGCACATTCAGCTTGCTGTT+AGG	0.440630	7.4:+2864278	MS.gene78324:CDS
GAGTTCCACTGGCACAACTA+AGG	0.456467	7.4:+2863924	MS.gene78324:CDS
AGGACGGCGGAGAGGTAGAC+AGG	0.463287	7.4:-2864078	None:intergenic
GGGACTGTGACCATTGCTAA+TGG	0.468303	7.4:+2864328	MS.gene78324:CDS
AGCACCGGCACCAACACGTT+CGG	0.480590	7.4:-2864055	None:intergenic
GTTTCAAGATCTTCAAAGGC+AGG	0.496108	7.4:+2863979	MS.gene78324:CDS
CTGGCACAACTAAGGGCGGA+AGG	0.502885	7.4:+2863932	MS.gene78324:CDS
ATCAGTTTCAAGATCTTCAA+AGG	0.503488	7.4:+2863975	MS.gene78324:CDS
CTACCTAAGAAGGTTGGAAA+GGG	0.510822	7.4:+2864382	MS.gene78324:CDS
TCTGCTTCTCAAGAATTCTA+GGG	0.519604	7.4:+2864421	MS.gene78324:CDS
GGCACAACTAAGGGCGGAAG+GGG	0.525782	7.4:+2863934	MS.gene78324:CDS
AATTGGCTGGGAACGCTGCA+AGG	0.533557	7.4:+2864227	MS.gene78324:CDS
ACTTTGCTACCTAAGAAGGT+TGG	0.535784	7.4:+2864376	MS.gene78324:CDS
TGGCACAACTAAGGGCGGAA+GGG	0.543224	7.4:+2863933	MS.gene78324:CDS
AGTTCCACTGGCACAACTAA+GGG	0.549244	7.4:+2863925	MS.gene78324:CDS
TACGCCGAACGTGTTGGTGC+CGG	0.556200	7.4:+2864051	MS.gene78324:CDS
GCTACCTAAGAAGGTTGGAA+AGG	0.557785	7.4:+2864381	MS.gene78324:CDS
ATTGGCTGGGAACGCTGCAA+GGG	0.562499	7.4:+2864228	MS.gene78324:CDS
ACAGCAAGCTGAATGTGCCT+TGG	0.570928	7.4:-2864274	None:intergenic
GAATGTGCCTTGGTACAATA+CGG	0.571461	7.4:-2864264	None:intergenic
GGGCGGAAGGGGTAAGCCAA+AGG	0.573881	7.4:+2863945	MS.gene78324:CDS
CGGCGTATTTACCGGCCTTG+AGG	0.577173	7.4:-2864035	None:intergenic
ATCGCGAGATTCCTCAAGGC+CGG	0.578871	7.4:+2864024	MS.gene78324:CDS
TCCGCCCTTAGTTGTGCCAG+TGG	0.580065	7.4:-2863929	None:intergenic
GAATCTCGCGATTCTTCCGA+CGG	0.592664	7.4:-2864013	None:intergenic
GGTAAATACGCCGAACGTGT+TGG	0.593895	7.4:+2864045	MS.gene78324:CDS
CCTTGAGTATCTCGCTGCTG+AGG	0.612329	7.4:+2864098	MS.gene78324:CDS
AAGAAGGTTGGAAAGGGCAA+AGG	0.621113	7.4:+2864388	MS.gene78324:CDS
AATCTCGCGATTCTTCCGAC+GGG	0.626786	7.4:-2864012	None:intergenic
TAAAACACCACCATTAGCAA+TGG	0.630364	7.4:-2864338	None:intergenic
CCTCAGCAGCGAGATACTCA+AGG	0.638807	7.4:-2864098	None:intergenic
GGAGAGGTAGACAGGAGCAC+CGG	0.644805	7.4:-2864070	None:intergenic
TCCACTGGCACAACTAAGGG+CGG	0.647888	7.4:+2863928	MS.gene78324:CDS
AAGAATCGCGAGATTCCTCA+AGG	0.651972	7.4:+2864020	MS.gene78324:CDS
ACTGTGACCATTGCTAATGG+TGG	0.653058	7.4:+2864331	MS.gene78324:CDS
GCAGGTCTTCAATTTCCCGT+CGG	0.653866	7.4:+2863997	MS.gene78324:CDS
GATACTCAAGGACGGCGGAG+AGG	0.669935	7.4:-2864086	None:intergenic
AGCAGCGAGATACTCAAGGA+CGG	0.684917	7.4:-2864094	None:intergenic
AGAAGAACCGTATTGTACCA+AGG	0.686303	7.4:+2864257	MS.gene78324:CDS
AGCGAGATACTCAAGGACGG+CGG	0.736224	7.4:-2864091	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAAATACAGTTTAATCAAAT+TGG	-	chr7.4:2864185-2864204	None:intergenic	15.0%
!!!	ATTAAACTGTATTTTCATTT+TGG	+	chr7.4:2864190-2864209	MS.gene78324:intron	15.0%
!!!	GTATTTTCATTTTGGTATTT+AGG	+	chr7.4:2864198-2864217	MS.gene78324:intron	20.0%
!!!	TCTCTTTTTTGTATAATGTA+GGG	+	chr7.4:2864151-2864170	MS.gene78324:intron	20.0%
!	ATACAAAAAAGAGAGTGAAA+GGG	-	chr7.4:2864145-2864164	None:intergenic	25.0%
!	TATACAAAAAAGAGAGTGAA+AGG	-	chr7.4:2864146-2864165	None:intergenic	25.0%
!!!	CTCTCTTTTTTGTATAATGT+AGG	+	chr7.4:2864150-2864169	MS.gene78324:intron	25.0%
!!!	TCATTTTGGTATTTAGGTTT+TGG	+	chr7.4:2864204-2864223	MS.gene78324:intron	25.0%
	AGCAAAGTCTGATGAATATT+AGG	-	chr7.4:2864364-2864383	None:intergenic	30.0%
	ATCAGTTTCAAGATCTTCAA+AGG	+	chr7.4:2863975-2863994	MS.gene78324:CDS	30.0%
	TGAAGATCTTGAAACTGATT+TGG	-	chr7.4:2863974-2863993	None:intergenic	30.0%
!!!	TGGTATTTAGGTTTTGGAAT+TGG	+	chr7.4:2864210-2864229	MS.gene78324:intron	30.0%
	GTGAAAGGGAAATTGAAGAA+AGG	-	chr7.4:2864131-2864150	None:intergenic	35.0%
	TAAAACACCACCATTAGCAA+TGG	-	chr7.4:2864341-2864360	None:intergenic	35.0%
!!!	ATTTAGGTTTTGGAATTGGC+TGG	+	chr7.4:2864214-2864233	MS.gene78324:intron	35.0%
!!!	TTTAGGTTTTGGAATTGGCT+GGG	+	chr7.4:2864215-2864234	MS.gene78324:intron	35.0%
	ACTTTGCTACCTAAGAAGGT+TGG	+	chr7.4:2864376-2864395	MS.gene78324:CDS	40.0%
	AGAAGAACCGTATTGTACCA+AGG	+	chr7.4:2864257-2864276	MS.gene78324:CDS	40.0%
	CTACCTAAGAAGGTTGGAAA+GGG	+	chr7.4:2864382-2864401	MS.gene78324:CDS	40.0%
	GAATGTGCCTTGGTACAATA+CGG	-	chr7.4:2864267-2864286	None:intergenic	40.0%
	GTTTCAAGATCTTCAAAGGC+AGG	+	chr7.4:2863979-2863998	MS.gene78324:CDS	40.0%
	TCAGACTTTGCTACCTAAGA+AGG	+	chr7.4:2864372-2864391	MS.gene78324:CDS	40.0%
!	AAGAACTCAGCAAGCTTTTG+GGG	+	chr7.4:2864308-2864327	MS.gene78324:CDS	40.0%
!	GAAGAACTCAGCAAGCTTTT+GGG	+	chr7.4:2864307-2864326	MS.gene78324:CDS	40.0%
!	TGAAGAACTCAGCAAGCTTT+TGG	+	chr7.4:2864306-2864325	MS.gene78324:CDS	40.0%
	AACACGTTCGGCGTATTTAC+CGG	-	chr7.4:2864046-2864065	None:intergenic	45.0%
	AAGAAGGTTGGAAAGGGCAA+AGG	+	chr7.4:2864388-2864407	MS.gene78324:CDS	45.0%
	AAGAATCGCGAGATTCCTCA+AGG	+	chr7.4:2864020-2864039	MS.gene78324:CDS	45.0%
	ACTGTGACCATTGCTAATGG+TGG	+	chr7.4:2864331-2864350	MS.gene78324:CDS	45.0%
	AGTTCCACTGGCACAACTAA+GGG	+	chr7.4:2863925-2863944	MS.gene78324:CDS	45.0%
	GCTACCTAAGAAGGTTGGAA+AGG	+	chr7.4:2864381-2864400	MS.gene78324:CDS	45.0%
	GGAAAGGGCAAAGGAGAAAT+TGG	+	chr7.4:2864397-2864416	MS.gene78324:CDS	45.0%
	TTGCCCTTTCCAACCTTCTT+AGG	-	chr7.4:2864388-2864407	None:intergenic	45.0%
!!	GAAACTGATTTGGCAGCCTT+TGG	-	chr7.4:2863964-2863983	None:intergenic	45.0%
	AATCTCGCGATTCTTCCGAC+GGG	-	chr7.4:2864015-2864034	None:intergenic	50.0%
	ACAGCAAGCTGAATGTGCCT+TGG	-	chr7.4:2864277-2864296	None:intergenic	50.0%
	AGCAGCGAGATACTCAAGGA+CGG	-	chr7.4:2864097-2864116	None:intergenic	50.0%
	GAATCTCGCGATTCTTCCGA+CGG	-	chr7.4:2864016-2864035	None:intergenic	50.0%
	GAGTTCCACTGGCACAACTA+AGG	+	chr7.4:2863924-2863943	MS.gene78324:CDS	50.0%
	GCAGGTCTTCAATTTCCCGT+CGG	+	chr7.4:2863997-2864016	MS.gene78324:CDS	50.0%
	GGGACTGTGACCATTGCTAA+TGG	+	chr7.4:2864328-2864347	MS.gene78324:CDS	50.0%
	GGTAAATACGCCGAACGTGT+TGG	+	chr7.4:2864045-2864064	MS.gene78324:CDS	50.0%
!!	GGCACATTCAGCTTGCTGTT+AGG	+	chr7.4:2864278-2864297	MS.gene78324:CDS	50.0%
	AATTGGCTGGGAACGCTGCA+AGG	+	chr7.4:2864227-2864246	MS.gene78324:CDS	55.0%
	AGCGAGATACTCAAGGACGG+CGG	-	chr7.4:2864094-2864113	None:intergenic	55.0%
	ATCGCGAGATTCCTCAAGGC+CGG	+	chr7.4:2864024-2864043	MS.gene78324:CDS	55.0%
	ATTGGCTGGGAACGCTGCAA+GGG	+	chr7.4:2864228-2864247	MS.gene78324:CDS	55.0%
	CCTCAGCAGCGAGATACTCA+AGG	-	chr7.4:2864101-2864120	None:intergenic	55.0%
	CCTTGAGTATCTCGCTGCTG+AGG	+	chr7.4:2864098-2864117	MS.gene78324:CDS	55.0%
	TCCACTGGCACAACTAAGGG+CGG	+	chr7.4:2863928-2863947	MS.gene78324:CDS	55.0%
	TGGCACAACTAAGGGCGGAA+GGG	+	chr7.4:2863933-2863952	MS.gene78324:CDS	55.0%
	CGGCGTATTTACCGGCCTTG+AGG	-	chr7.4:2864038-2864057	None:intergenic	60.0%
	CTGGCACAACTAAGGGCGGA+AGG	+	chr7.4:2863932-2863951	MS.gene78324:CDS	60.0%
	GATACTCAAGGACGGCGGAG+AGG	-	chr7.4:2864089-2864108	None:intergenic	60.0%
	GGCACAACTAAGGGCGGAAG+GGG	+	chr7.4:2863934-2863953	MS.gene78324:CDS	60.0%
	TCCGCCCTTAGTTGTGCCAG+TGG	-	chr7.4:2863932-2863951	None:intergenic	60.0%
!	GGAGAGGTAGACAGGAGCAC+CGG	-	chr7.4:2864073-2864092	None:intergenic	60.0%
!	TACGCCGAACGTGTTGGTGC+CGG	+	chr7.4:2864051-2864070	MS.gene78324:CDS	60.0%
!!	AGCACCGGCACCAACACGTT+CGG	-	chr7.4:2864058-2864077	None:intergenic	60.0%
	AGGACGGCGGAGAGGTAGAC+AGG	-	chr7.4:2864081-2864100	None:intergenic	65.0%
	GGGCGGAAGGGGTAAGCCAA+AGG	+	chr7.4:2863945-2863964	MS.gene78324:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr7.4	gene	2863922	2864441	2863922	ID=MS.gene78324
chr7.4	mRNA	2863922	2864441	2863922	ID=MS.gene78324.t1;Parent=MS.gene78324
chr7.4	exon	2863922	2864119	2863922	ID=MS.gene78324.t1.exon1;Parent=MS.gene78324.t1
chr7.4	CDS	2863922	2864119	2863922	ID=cds.MS.gene78324.t1;Parent=MS.gene78324.t1
chr7.4	exon	2864220	2864441	2864220	ID=MS.gene78324.t1.exon2;Parent=MS.gene78324.t1
chr7.4	CDS	2864220	2864441	2864220	ID=cds.MS.gene78324.t1;Parent=MS.gene78324.t1

Gene Sequence

>MS.gene78324

ATGAGTTCCACTGGCACAACTAAGGGCGGAAGGGGTAAGCCAAAGGCTGCCAAATCAGTTTCAAGATCTTCAAAGGCAGGTCTTCAATTTCCCGTCGGAAGAATCGCGAGATTCCTCAAGGCCGGTAAATACGCCGAACGTGTTGGTGCCGGTGCTCCTGTCTACCTCTCCGCCGTCCTTGAGTATCTCGCTGCTGAGGTTTGTTTCCTTTCTTCAATTTCCCTTTCACTCTCTTTTTTGTATAATGTAGGGTTCTAGATCCAATTTGATTAAACTGTATTTTCATTTTGGTATTTAGGTTTTGGAATTGGCTGGGAACGCTGCAAGGGACAACAAGAAGAACCGTATTGTACCAAGGCACATTCAGCTTGCTGTTAGGAACGATGAAGAACTCAGCAAGCTTTTGGGGACTGTGACCATTGCTAATGGTGGTGTTTTACCTAATATTCATCAGACTTTGCTACCTAAGAAGGTTGGAAAGGGCAAAGGAGAAATTGGATCTGCTTCTCAAGAATTCTAG

Protein sequence

>MS.gene78324.t1

MSSTGTTKGGRGKPKAAKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQTLLPKKVGKGKGEIGSASQEF