Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60979.t1 | XP_003628813.1 | 91.8 | 110 | 8 | 1 | 12 | 121 | 301 | 409 | 4.50E-28 | 134 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60979.t1 | Q9FIQ0 | 75.9 | 112 | 25 | 2 | 12 | 121 | 291 | 402 | 6.2e-18 | 91.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60979.t1 | G7LHQ5 | 91.8 | 110 | 8 | 1 | 12 | 121 | 301 | 409 | 3.3e-28 | 134.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene60979 | -0.801949 | 7.07E-49 | -1.69E-46 |
| MS.gene049222 | MS.gene60979 | -0.815832 | 7.55E-52 | -1.69E-46 |
| MS.gene049633 | MS.gene60979 | -0.809774 | 1.60E-50 | -1.69E-46 |
| MS.gene050165 | MS.gene60979 | -0.813175 | 2.92E-51 | -1.69E-46 |
| MS.gene050504 | MS.gene60979 | -0.818392 | 2.01E-52 | -1.69E-46 |
| MS.gene050518 | MS.gene60979 | -0.80145 | 8.95E-49 | -1.69E-46 |
| MS.gene050577 | MS.gene60979 | -0.836675 | 8.14E-57 | -1.69E-46 |
| MS.gene050612 | MS.gene60979 | -0.806525 | 7.89E-50 | -1.69E-46 |
| MS.gene050904 | MS.gene60979 | -0.874043 | 9.19E-68 | -1.69E-46 |
| MS.gene051317 | MS.gene60979 | -0.841995 | 3.39E-58 | -1.69E-46 |
| MS.gene052164 | MS.gene60979 | -0.815828 | 7.57E-52 | -1.69E-46 |
| MS.gene052482 | MS.gene60979 | -0.816354 | 5.78E-52 | -1.69E-46 |
| MS.gene052486 | MS.gene60979 | -0.81869 | 1.72E-52 | -1.69E-46 |
| MS.gene05470 | MS.gene60979 | -0.829879 | 4.02E-55 | -1.69E-46 |
| MS.gene055748 | MS.gene60979 | -0.835466 | 1.65E-56 | -1.69E-46 |
| MS.gene055751 | MS.gene60979 | -0.833121 | 6.40E-56 | -1.69E-46 |
| MS.gene05589 | MS.gene60979 | -0.826156 | 3.17E-54 | -1.69E-46 |
| MS.gene056504 | MS.gene60979 | -0.80271 | 4.93E-49 | -1.69E-46 |
| MS.gene056583 | MS.gene60979 | 0.80351 | 3.37E-49 | -1.69E-46 |
| MS.gene056618 | MS.gene60979 | 0.823937 | 1.06E-53 | -1.69E-46 |
| MS.gene057831 | MS.gene60979 | -0.804411 | 2.19E-49 | -1.69E-46 |
| MS.gene059526 | MS.gene60979 | 0.826389 | 2.79E-54 | -1.69E-46 |
| MS.gene06000 | MS.gene60979 | -0.807271 | 5.48E-50 | -1.69E-46 |
| MS.gene060762 | MS.gene60979 | -0.827607 | 1.43E-54 | -1.69E-46 |
| MS.gene06077 | MS.gene60979 | -0.800064 | 1.72E-48 | -1.69E-46 |
| MS.gene060823 | MS.gene60979 | 0.805456 | 1.32E-49 | -1.69E-46 |
| MS.gene060982 | MS.gene60979 | -0.820681 | 6.03E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60979.t1 | MTR_8g067080 | 98.182 | 110 | 1 | 1 | 12 | 121 | 299 | 407 | 1.10e-66 | 206 |
| MS.gene60979.t1 | MTR_8g067080 | 98.182 | 110 | 1 | 1 | 12 | 121 | 301 | 409 | 3.43e-66 | 205 |
| MS.gene60979.t1 | MTR_8g471110 | 98.182 | 110 | 1 | 1 | 12 | 121 | 301 | 409 | 3.43e-66 | 205 |
| MS.gene60979.t1 | MTR_8g067090 | 87.387 | 111 | 13 | 1 | 12 | 121 | 291 | 401 | 4.10e-51 | 166 |
| MS.gene60979.t1 | MTR_8g471120 | 87.387 | 111 | 13 | 1 | 12 | 121 | 291 | 401 | 4.10e-51 | 166 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60979.t1 | AT4G17890 | 66.071 | 112 | 36 | 2 | 12 | 121 | 302 | 413 | 8.08e-44 | 147 |
| MS.gene60979.t1 | AT5G46750 | 66.964 | 112 | 35 | 2 | 12 | 121 | 291 | 402 | 2.59e-43 | 146 |
| MS.gene60979.t1 | AT2G35210 | 69.231 | 104 | 30 | 2 | 12 | 113 | 291 | 394 | 4.87e-38 | 132 |
| MS.gene60979.t1 | AT4G17890 | 63.291 | 79 | 27 | 2 | 12 | 88 | 302 | 380 | 1.42e-26 | 101 |
| MS.gene60979.t1 | AT2G35210 | 64.444 | 45 | 15 | 1 | 12 | 55 | 291 | 335 | 8.50e-11 | 58.2 |
Find 17 sgRNAs with CRISPR-Local
Find 128 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTGTGTCTGTATAAGATTC+AGG | 0.288486 | 8.1:+37459511 | MS.gene60979:CDS |
| CATCCGCATTGGCCTTGTTC+TGG | 0.300754 | 8.1:-37459601 | None:intergenic |
| CTCCTTGATGACAGATCTTC+AGG | 0.326640 | 8.1:+37461142 | MS.gene60979:CDS |
| TATCAATAGAATATCTTTCC+AGG | 0.348903 | 8.1:+37460925 | MS.gene60979:CDS |
| AAGAACATTGCTGGAGAGAC+TGG | 0.349107 | 8.1:+37461095 | MS.gene60979:CDS |
| TCTCTCCAGCAATGTTCTTA+AGG | 0.357125 | 8.1:-37461091 | None:intergenic |
| TCTTCCCTTAAGAACATTGC+TGG | 0.364267 | 8.1:+37461086 | MS.gene60979:CDS |
| CTCTCCAGCAATGTTCTTAA+GGG | 0.388884 | 8.1:-37461090 | None:intergenic |
| GGAAAGATATTCTATTGATA+AGG | 0.495577 | 8.1:-37460922 | None:intergenic |
| AGAACATTGCTGGAGAGACT+GGG | 0.589784 | 8.1:+37461096 | MS.gene60979:CDS |
| AGTTGCTTGAGCATCCGCAT+TGG | 0.602475 | 8.1:-37459612 | None:intergenic |
| TGTCATCAAGGAGGATGCCA+AGG | 0.607478 | 8.1:-37461132 | None:intergenic |
| GTCCTGAAGATCTGTCATCA+AGG | 0.612922 | 8.1:-37461144 | None:intergenic |
| GTCACTAGCAGCAAGATCAA+CGG | 0.616043 | 8.1:-37460900 | None:intergenic |
| CATCAAGGAGGATGCCAAGG+AGG | 0.643523 | 8.1:-37461129 | None:intergenic |
| AGACCAGAACAAGGCCAATG+CGG | 0.704868 | 8.1:+37459598 | MS.gene60979:CDS |
| CTGAAGATCTGTCATCAAGG+AGG | 0.709942 | 8.1:-37461141 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATTACTTGATTAAATT+TGG | - | chr8.1:37460580-37460599 | None:intergenic | 10.0% |
| !!! | AAATTTAATCAAGTAATTTT+TGG | + | chr8.1:37460579-37460598 | MS.gene60979:intron | 10.0% |
| !! | GACTAATATTATTTACATTT+GGG | + | chr8.1:37459934-37459953 | MS.gene60979:intron | 15.0% |
| !! | TCAATTATGTATGATATAAA+TGG | - | chr8.1:37460270-37460289 | None:intergenic | 15.0% |
| !! | TTAAATATTGATACTTAACT+TGG | + | chr8.1:37460804-37460823 | MS.gene60979:intron | 15.0% |
| !! | TTCTATTCGTTATAATTTAT+CGG | + | chr8.1:37460507-37460526 | MS.gene60979:intron | 15.0% |
| !! | TTTATATCATACATAATTGA+AGG | + | chr8.1:37460270-37460289 | MS.gene60979:intron | 15.0% |
| !! | AAATAATATTAGTCCTTGTA+AGG | - | chr8.1:37459928-37459947 | None:intergenic | 20.0% |
| !! | CAAAATAATCTATACTTACA+CGG | + | chr8.1:37460043-37460062 | MS.gene60979:intron | 20.0% |
| !! | GGACTAATATTATTTACATT+TGG | + | chr8.1:37459933-37459952 | MS.gene60979:intron | 20.0% |
| !! | TATAGATATAGATATGTTGA+GGG | + | chr8.1:37460647-37460666 | MS.gene60979:intron | 20.0% |
| !! | TTATAGATATAGATATGTTG+AGG | + | chr8.1:37460646-37460665 | MS.gene60979:intron | 20.0% |
| ! | AGGTAATCCTTATATTATAC+TGG | + | chr8.1:37460945-37460964 | MS.gene60979:intron | 25.0% |
| ! | AGTATAATATAAGGATTACC+TGG | - | chr8.1:37460946-37460965 | None:intergenic | 25.0% |
| ! | ATACTTACACGGAAATTTAA+GGG | + | chr8.1:37460054-37460073 | MS.gene60979:intron | 25.0% |
| ! | GGAAAGATATTCTATTGATA+AGG | - | chr8.1:37460925-37460944 | None:intergenic | 25.0% |
| ! | GTTTGACATCAAATTTATCA+GGG | - | chr8.1:37459824-37459843 | None:intergenic | 25.0% |
| ! | TACATACTAACACTTTGTTA+CGG | - | chr8.1:37459680-37459699 | None:intergenic | 25.0% |
| ! | TATACTTACACGGAAATTTA+AGG | + | chr8.1:37460053-37460072 | MS.gene60979:intron | 25.0% |
| ! | TATCAATAGAATATCTTTCC+AGG | + | chr8.1:37460925-37460944 | MS.gene60979:CDS | 25.0% |
| ! | TGTTTGACATCAAATTTATC+AGG | - | chr8.1:37459825-37459844 | None:intergenic | 25.0% |
| ! | TTGTGTTCAGAAATAATTTC+AGG | - | chr8.1:37460296-37460315 | None:intergenic | 25.0% |
| ! | TTTGTGTCCAGTATAATATA+AGG | - | chr8.1:37460955-37460974 | None:intergenic | 25.0% |
| !! | AATCTTCTCTTTTCTTTCTT+GGG | + | chr8.1:37460691-37460710 | MS.gene60979:intron | 25.0% |
| !! | ATGAATGATATTTTACTCAC+AGG | + | chr8.1:37460127-37460146 | MS.gene60979:intron | 25.0% |
| !! | CTATAATATCTGAAATTCCA+TGG | - | chr8.1:37460632-37460651 | None:intergenic | 25.0% |
| !! | TAATCTTCTCTTTTCTTTCT+TGG | + | chr8.1:37460690-37460709 | MS.gene60979:intron | 25.0% |
| !! | TCTATCCTTTTATATTTCCA+GGG | + | chr8.1:37460827-37460846 | MS.gene60979:intron | 25.0% |
| !! | TTAGCATTTTTGCATTATCA+AGG | + | chr8.1:37459980-37459999 | MS.gene60979:intron | 25.0% |
| !!! | AAATTTATCAGGGTTGATTT+TGG | - | chr8.1:37459814-37459833 | None:intergenic | 25.0% |
| !!! | AAGAGACATATTTTTCAAGA+AGG | - | chr8.1:37460489-37460508 | None:intergenic | 25.0% |
| !!! | AGTAATTTTTGGCATCTATT+TGG | + | chr8.1:37460590-37460609 | MS.gene60979:intron | 25.0% |
| !!! | ATTTCTTCATCCCAATTTTT+TGG | + | chr8.1:37459575-37459594 | MS.gene60979:CDS | 25.0% |
| !!! | TATTAGTCAAATTAGTCTTC+AGG | + | chr8.1:37459895-37459914 | MS.gene60979:intron | 25.0% |
| !!! | TTATTCCAGACTTGTTTTAT+AGG | + | chr8.1:37460168-37460187 | MS.gene60979:intron | 25.0% |
| AAAGCATGTTCAAATGCATT+GGG | - | chr8.1:37460465-37460484 | None:intergenic | 30.0% | |
| ACGGTAAGTTACTAAAAGAA+AGG | - | chr8.1:37459661-37459680 | None:intergenic | 30.0% | |
| ATATAGATATGTTGAGGGAT+TGG | + | chr8.1:37460652-37460671 | MS.gene60979:intron | 30.0% | |
| ATGAACCCTGGAAATATAAA+AGG | - | chr8.1:37460835-37460854 | None:intergenic | 30.0% | |
| GAAAGAAAAGAGAAGATTAC+CGG | - | chr8.1:37460689-37460708 | None:intergenic | 30.0% | |
| TAGTTCCTTAGAGACTAATA+AGG | - | chr8.1:37459874-37459893 | None:intergenic | 30.0% | |
| TTCTTTGTATTTGTTCTGTG+TGG | + | chr8.1:37461003-37461022 | MS.gene60979:intron | 30.0% | |
| TTTACTAGTAAACACCATTG+TGG | + | chr8.1:37460240-37460259 | MS.gene60979:intron | 30.0% | |
| ! | AAAAGCATGTTCAAATGCAT+TGG | - | chr8.1:37460466-37460485 | None:intergenic | 30.0% |
| ! | ATATAAATGGTTTGCCACAA+TGG | - | chr8.1:37460257-37460276 | None:intergenic | 30.0% |
| ! | ATGTCACATACTCTTTTGAT+TGG | + | chr8.1:37459762-37459781 | MS.gene60979:intron | 30.0% |
| ! | ATTTGCCCAGAAAATTTTGA+TGG | - | chr8.1:37460019-37460038 | None:intergenic | 30.0% |
| ! | CAAAATTTTCTGGGCAAATT+AGG | + | chr8.1:37460020-37460039 | MS.gene60979:intron | 30.0% |
| ! | GTCTATCCTTTTATATTTCC+AGG | + | chr8.1:37460826-37460845 | MS.gene60979:intron | 30.0% |
| ! | GTTTTCTCTTCTGTCAAAAT+GGG | + | chr8.1:37460411-37460430 | MS.gene60979:intron | 30.0% |
| ! | TCGTTATAATTTATCGGCTA+GGG | + | chr8.1:37460513-37460532 | MS.gene60979:intron | 30.0% |
| ! | TTACGCCATCAAAATTTTCT+GGG | + | chr8.1:37460011-37460030 | MS.gene60979:intron | 30.0% |
| ! | TTCGTTATAATTTATCGGCT+AGG | + | chr8.1:37460512-37460531 | MS.gene60979:intron | 30.0% |
| ! | TTTACGCCATCAAAATTTTC+TGG | + | chr8.1:37460010-37460029 | MS.gene60979:intron | 30.0% |
| !! | GTTGATTTTGGAAATTTGGT+AGG | - | chr8.1:37459802-37459821 | None:intergenic | 30.0% |
| !!! | CATTTTTTGGTGCTTTAGTA+TGG | + | chr8.1:37460389-37460408 | MS.gene60979:intron | 30.0% |
| ACAAACTTAATGAGCAACGA+AGG | + | chr8.1:37460970-37460989 | MS.gene60979:intron | 35.0% | |
| AGTTTCCACTCGTAAACATT+GGG | - | chr8.1:37460369-37460388 | None:intergenic | 35.0% | |
| ATATTAGTCCTTGTAAGGTC+TGG | - | chr8.1:37459923-37459942 | None:intergenic | 35.0% | |
| ATTCCTAGTTGCAAAGACAT+GGG | - | chr8.1:37460752-37460771 | None:intergenic | 35.0% | |
| GTGTAAAGCAAATTAAGCCA+TGG | + | chr8.1:37460612-37460631 | MS.gene60979:intron | 35.0% | |
| GTTCTGGTCTCCAAAAAATT+GGG | - | chr8.1:37459588-37459607 | None:intergenic | 35.0% | |
| TAGGAATGGAAAAACGAAGA+GGG | + | chr8.1:37460765-37460784 | MS.gene60979:intron | 35.0% | |
| TCTGTGTCTGTATAAGATTC+AGG | + | chr8.1:37459511-37459530 | MS.gene60979:CDS | 35.0% | |
| TGTGACCTATAAAACAAGTC+TGG | - | chr8.1:37460176-37460195 | None:intergenic | 35.0% | |
| TGTTCTGGTCTCCAAAAAAT+TGG | - | chr8.1:37459589-37459608 | None:intergenic | 35.0% | |
| TTCCTTAGAGACTAATAAGG+CGG | - | chr8.1:37459871-37459890 | None:intergenic | 35.0% | |
| ! | ATCTTGTTGTGCCTGTAATA+AGG | - | chr8.1:37461063-37461082 | None:intergenic | 35.0% |
| ! | GGTTTTCTCTTCTGTCAAAA+TGG | + | chr8.1:37460410-37460429 | MS.gene60979:intron | 35.0% |
| ! | TATAATTTATCGGCTAGGGT+TGG | + | chr8.1:37460517-37460536 | MS.gene60979:intron | 35.0% |
| ! | TCTTGTTGTGCCTGTAATAA+GGG | - | chr8.1:37461062-37461081 | None:intergenic | 35.0% |
| !! | CAGGGTTGATTTTGGAAATT+TGG | - | chr8.1:37459806-37459825 | None:intergenic | 35.0% |
| !!! | ACGAGTGGAAACTCATTTTT+TGG | + | chr8.1:37460376-37460395 | MS.gene60979:intron | 35.0% |
| !!! | ATTTTTTGGAGACCAGAACA+AGG | + | chr8.1:37459589-37459608 | MS.gene60979:CDS | 35.0% |
| ATATTTAACTCCCTCTCTCC+CGG | - | chr8.1:37460792-37460811 | None:intergenic | 40.0% | |
| CATGTCTTTGCAACTAGGAA+TGG | + | chr8.1:37460751-37460770 | MS.gene60979:intron | 40.0% | |
| CATTCCTAGTTGCAAAGACA+TGG | - | chr8.1:37460753-37460772 | None:intergenic | 40.0% | |
| CTAGGAATGGAAAAACGAAG+AGG | + | chr8.1:37460764-37460783 | MS.gene60979:intron | 40.0% | |
| CTCTCCAGCAATGTTCTTAA+GGG | - | chr8.1:37461093-37461112 | None:intergenic | 40.0% | |
| GAGTTTCCACTCGTAAACAT+TGG | - | chr8.1:37460370-37460389 | None:intergenic | 40.0% | |
| TAATCCCTACAGAGTACAGT+CGG | - | chr8.1:37460216-37460235 | None:intergenic | 40.0% | |
| TCCTTAGAGACTAATAAGGC+GGG | - | chr8.1:37459870-37459889 | None:intergenic | 40.0% | |
| TCTCTCCAGCAATGTTCTTA+AGG | - | chr8.1:37461094-37461113 | None:intergenic | 40.0% | |
| TCTTCCCTTAAGAACATTGC+TGG | + | chr8.1:37461086-37461105 | MS.gene60979:CDS | 40.0% | |
| TGTAACCCAATGTTTACGAG+TGG | + | chr8.1:37460361-37460380 | MS.gene60979:intron | 40.0% | |
| ! | AAAAAGATCAGCACTGGAGA+TGG | - | chr8.1:37460861-37460880 | None:intergenic | 40.0% |
| ! | TGTTCTGTGTGGATGTTTTG+TGG | + | chr8.1:37461014-37461033 | MS.gene60979:intron | 40.0% |
| !!! | ATCTCCAGTGCTGATCTTTT+TGG | + | chr8.1:37460860-37460879 | MS.gene60979:CDS | 40.0% |
| AAGAACATTGCTGGAGAGAC+TGG | + | chr8.1:37461095-37461114 | MS.gene60979:CDS | 45.0% | |
| AGAACATTGCTGGAGAGACT+GGG | + | chr8.1:37461096-37461115 | MS.gene60979:CDS | 45.0% | |
| AGATGTTCAATGCCCTGTAG+TGG | + | chr8.1:37459716-37459735 | MS.gene60979:intron | 45.0% | |
| CTGAAGATCTGTCATCAAGG+AGG | - | chr8.1:37461144-37461163 | None:intergenic | 45.0% | |
| GTCACCAAAAAGATCAGCAC+TGG | - | chr8.1:37460867-37460886 | None:intergenic | 45.0% | |
| GTCACTAGCAGCAAGATCAA+CGG | - | chr8.1:37460903-37460922 | None:intergenic | 45.0% | |
| GTCCTGAAGATCTGTCATCA+AGG | - | chr8.1:37461147-37461166 | None:intergenic | 45.0% | |
| GTTGTGCCTGTAATAAGGGA+GGG | - | chr8.1:37461058-37461077 | None:intergenic | 45.0% | |
| TATTTAACTCCCTCTCTCCC+GGG | - | chr8.1:37460791-37460810 | None:intergenic | 45.0% | |
| TCTCCCATGTCTTTGCAACT+AGG | + | chr8.1:37460746-37460765 | MS.gene60979:intron | 45.0% | |
| TGGGAAAAAACTCACCTCCT+TGG | + | chr8.1:37461115-37461134 | MS.gene60979:CDS | 45.0% | |
| TGTTGTGCCTGTAATAAGGG+AGG | - | chr8.1:37461059-37461078 | None:intergenic | 45.0% | |
| TTGTGCCTGTAATAAGGGAG+GGG | - | chr8.1:37461057-37461076 | None:intergenic | 45.0% | |
| ! | ATCCAATACAGTGCCACTAC+AGG | - | chr8.1:37459732-37459751 | None:intergenic | 45.0% |
| ! | CTCCTTGATGACAGATCTTC+AGG | + | chr8.1:37461142-37461161 | MS.gene60979:CDS | 45.0% |
| ! | GGGATTGGTAAGCTATGTTC+CGG | + | chr8.1:37460667-37460686 | MS.gene60979:intron | 45.0% |
| ! | TCCAATACAGTGCCACTACA+GGG | - | chr8.1:37459731-37459750 | None:intergenic | 45.0% |
| ! | TCCCGCCTTATTAGTCTCTA+AGG | + | chr8.1:37459866-37459885 | MS.gene60979:intron | 45.0% |
| ! | TGTAATAAGGGAGGGGTGTA+GGG | - | chr8.1:37461050-37461069 | None:intergenic | 45.0% |
| !! | TATACAATTAATTAATATTA+AGG | - | chr8.1:37460337-37460356 | None:intergenic | 5.0% |
| AAGGCGGGACTTCTGTATTC+AGG | - | chr8.1:37459855-37459874 | None:intergenic | 50.0% | |
| AGACCAGAACAAGGCCAATG+CGG | + | chr8.1:37459598-37459617 | MS.gene60979:CDS | 50.0% | |
| AGTTGCTTGAGCATCCGCAT+TGG | - | chr8.1:37459615-37459634 | None:intergenic | 50.0% | |
| ATGGAAAAACGAAGAGGGCC+CGG | + | chr8.1:37460770-37460789 | MS.gene60979:intron | 50.0% | |
| CTACACCCCTCCCTTATTAC+AGG | + | chr8.1:37461049-37461068 | MS.gene60979:intron | 50.0% | |
| CTGTCCGACTGTACTCTGTA+GGG | + | chr8.1:37460209-37460228 | MS.gene60979:intron | 50.0% | |
| TCTGTCCGACTGTACTCTGT+AGG | + | chr8.1:37460208-37460227 | MS.gene60979:intron | 50.0% | |
| TGTCATCAAGGAGGATGCCA+AGG | - | chr8.1:37461135-37461154 | None:intergenic | 50.0% | |
| TTCAGGCACCAGACCTTACA+AGG | + | chr8.1:37459912-37459931 | MS.gene60979:intron | 50.0% | |
| ! | CTGTAATAAGGGAGGGGTGT+AGG | - | chr8.1:37461051-37461070 | None:intergenic | 50.0% |
| CATCAAGGAGGATGCCAAGG+AGG | - | chr8.1:37461132-37461151 | None:intergenic | 55.0% | |
| GAGTGGGATGAGTGCGAGAA+AGG | + | chr8.1:37460542-37460561 | MS.gene60979:intron | 55.0% | |
| GCCCTGTAGTGGCACTGTAT+TGG | + | chr8.1:37459727-37459746 | MS.gene60979:intron | 55.0% | |
| TGGAAAAACGAAGAGGGCCC+GGG | + | chr8.1:37460771-37460790 | MS.gene60979:intron | 55.0% | |
| TGGAGATGGCAGATGAACCC+TGG | - | chr8.1:37460847-37460866 | None:intergenic | 55.0% | |
| !! | ATCGGCTAGGGTTGGTTGAG+TGG | + | chr8.1:37460525-37460544 | MS.gene60979:intron | 55.0% |
| !! | CATCCGCATTGGCCTTGTTC+TGG | - | chr8.1:37459604-37459623 | None:intergenic | 55.0% |
| !! | TCGGCTAGGGTTGGTTGAGT+GGG | + | chr8.1:37460526-37460545 | MS.gene60979:intron | 55.0% |
| ACGAAGAGGGCCCGGGAGAG+AGG | + | chr8.1:37460778-37460797 | MS.gene60979:intron | 70.0% | |
| CGAAGAGGGCCCGGGAGAGA+GGG | + | chr8.1:37460779-37460798 | MS.gene60979:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 37459491 | 37461178 | 37459491 | ID=MS.gene60979 |
| chr8.1 | mRNA | 37459491 | 37461178 | 37459491 | ID=MS.gene60979.t1;Parent=MS.gene60979 |
| chr8.1 | exon | 37459491 | 37459649 | 37459491 | ID=MS.gene60979.t1.exon1;Parent=MS.gene60979.t1 |
| chr8.1 | CDS | 37459491 | 37459649 | 37459491 | ID=cds.MS.gene60979.t1;Parent=MS.gene60979.t1 |
| chr8.1 | exon | 37460848 | 37460946 | 37460848 | ID=MS.gene60979.t1.exon2;Parent=MS.gene60979.t1 |
| chr8.1 | CDS | 37460848 | 37460946 | 37460848 | ID=cds.MS.gene60979.t1;Parent=MS.gene60979.t1 |
| chr8.1 | exon | 37461071 | 37461178 | 37461071 | ID=MS.gene60979.t1.exon3;Parent=MS.gene60979.t1 |
| chr8.1 | CDS | 37461071 | 37461178 | 37461071 | ID=cds.MS.gene60979.t1;Parent=MS.gene60979.t1 |
| Gene Sequence |
| Protein sequence |
