Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61101.t1 | XP_003606657.1 | 98 | 358 | 7 | 0 | 1 | 358 | 1 | 358 | 3.50E-201 | 710.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61101.t1 | G7JUS4 | 98.0 | 358 | 7 | 0 | 1 | 358 | 1 | 358 | 2.5e-201 | 710.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049254 | MS.gene61101 | -0.841675 | 4.12E-58 | -1.69E-46 |
| MS.gene049343 | MS.gene61101 | -0.826332 | 2.87E-54 | -1.69E-46 |
| MS.gene050287 | MS.gene61101 | 0.81707 | 3.99E-52 | -1.69E-46 |
| MS.gene052519 | MS.gene61101 | -0.802551 | 5.32E-49 | -1.69E-46 |
| MS.gene052582 | MS.gene61101 | -0.808551 | 2.93E-50 | -1.69E-46 |
| MS.gene052584 | MS.gene61101 | -0.810776 | 9.74E-51 | -1.69E-46 |
| MS.gene053226 | MS.gene61101 | -0.805105 | 1.57E-49 | -1.69E-46 |
| MS.gene054291 | MS.gene61101 | 0.805995 | 1.02E-49 | -1.69E-46 |
| MS.gene054467 | MS.gene61101 | -0.80058 | 1.35E-48 | -1.69E-46 |
| MS.gene054468 | MS.gene61101 | -0.808112 | 3.63E-50 | -1.69E-46 |
| MS.gene054651 | MS.gene61101 | -0.823962 | 1.04E-53 | -1.69E-46 |
| MS.gene055818 | MS.gene61101 | -0.817749 | 2.81E-52 | -1.69E-46 |
| MS.gene05604 | MS.gene61101 | -0.801976 | 6.98E-49 | -1.69E-46 |
| MS.gene056050 | MS.gene61101 | -0.825344 | 4.94E-54 | -1.69E-46 |
| MS.gene056366 | MS.gene61101 | -0.804056 | 2.59E-49 | -1.69E-46 |
| MS.gene056595 | MS.gene61101 | -0.801057 | 1.08E-48 | -1.69E-46 |
| MS.gene058625 | MS.gene61101 | -0.84663 | 1.92E-59 | -1.69E-46 |
| MS.gene060373 | MS.gene61101 | -0.810662 | 1.03E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61101.t1 | MTR_4g063570 | 98.045 | 358 | 7 | 0 | 1 | 358 | 1 | 358 | 0.0 | 726 |
| MS.gene61101.t1 | MTR_4g063570 | 96.617 | 266 | 4 | 1 | 1 | 266 | 1 | 261 | 0.0 | 519 |
| MS.gene61101.t1 | MTR_4g063570 | 96.617 | 266 | 4 | 1 | 1 | 266 | 1 | 261 | 0.0 | 518 |
| MS.gene61101.t1 | MTR_4g063570 | 96.209 | 211 | 3 | 1 | 56 | 266 | 3 | 208 | 1.40e-145 | 410 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61101.t1 | AT5G59960 | 77.059 | 340 | 78 | 0 | 12 | 351 | 16 | 355 | 0.0 | 555 |
| MS.gene61101.t1 | AT5G59960 | 76.712 | 292 | 68 | 0 | 12 | 303 | 16 | 307 | 1.06e-167 | 470 |
| MS.gene61101.t1 | AT5G59960 | 81.275 | 251 | 47 | 0 | 101 | 351 | 1 | 251 | 2.69e-154 | 434 |
Find 74 sgRNAs with CRISPR-Local
Find 264 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCATTATCTTTCAGAAATTA+AGG | 0.220788 | 4.4:+42517615 | MS.gene61101:CDS |
| TTCAGAAATTAAGGTCCTTC+AGG | 0.292111 | 4.4:+42517624 | MS.gene61101:CDS |
| GAATACCGAAGGAGCACTTC+TGG | 0.300314 | 4.4:-42516383 | None:intergenic |
| GGTATTGGCCATCCTCTTGC+TGG | 0.327491 | 4.4:+42518382 | MS.gene61101:CDS |
| CCATCCATGGCGTAAATTAC+AGG | 0.342020 | 4.4:-42515432 | None:intergenic |
| TTCCAAACTGCTTTCTTAGT+TGG | 0.343184 | 4.4:+42517417 | MS.gene61101:CDS |
| AAGAAAGCAGTTTGGAAAAC+AGG | 0.345106 | 4.4:-42517411 | None:intergenic |
| ATCTCATTAGTTTGTTCTTC+AGG | 0.350126 | 4.4:+42518346 | MS.gene61101:CDS |
| TACATACCCATTTGTGAAAC+AGG | 0.360149 | 4.4:-42515578 | None:intergenic |
| AATTCGCCGCCGAGAAATTC+CGG | 0.371340 | 4.4:+42514306 | MS.gene61101:CDS |
| GGTTGCTTTATCCATGGTAT+TGG | 0.378782 | 4.4:+42518367 | MS.gene61101:CDS |
| CCCTCAAATTCAGTACCTCT+TGG | 0.387643 | 4.4:+42517053 | MS.gene61101:intron |
| CATTTGTAGCACCTTGAACT+AGG | 0.392303 | 4.4:-42516412 | None:intergenic |
| GCAGAGGCGTAATTTGTTGC+AGG | 0.395535 | 4.4:+42514490 | MS.gene61101:CDS |
| TTAGCCTCCTGTTTCACAAA+TGG | 0.406813 | 4.4:+42515571 | MS.gene61101:CDS |
| GAGCTGTTCGTCATGCTGCC+TGG | 0.412460 | 4.4:+42517828 | MS.gene61101:CDS |
| TAGCCTCCTGTTTCACAAAT+GGG | 0.426157 | 4.4:+42515572 | MS.gene61101:CDS |
| AGAGAGAGCATCGAGATAAC+CGG | 0.433517 | 4.4:-42514325 | None:intergenic |
| AAGAAAATCCAGTGCTTCCC+AGG | 0.438344 | 4.4:-42517846 | None:intergenic |
| TCAGAAATTAAGGTCCTTCA+GGG | 0.439567 | 4.4:+42517625 | MS.gene61101:CDS |
| TATTCATCTGCCCTAGTTCA+AGG | 0.439663 | 4.4:+42516401 | MS.gene61101:CDS |
| ACTTTGTGATTTCCTGCATT+CGG | 0.440801 | 4.4:+42518406 | MS.gene61101:CDS |
| TCGAGATAACCGGAATTTCT+CGG | 0.441952 | 4.4:-42514315 | None:intergenic |
| TTACCAGCTTCAAAAGCTAA+AGG | 0.450026 | 4.4:+42517576 | MS.gene61101:intron |
| TGTGAATGAACTTACTGATC+AGG | 0.450938 | 4.4:+42517458 | MS.gene61101:CDS |
| AGCTGTTCGTCATGCTGCCT+GGG | 0.455494 | 4.4:+42517829 | MS.gene61101:CDS |
| AGAAAATATCAACCCGAGTA+AGG | 0.461893 | 4.4:-42518442 | None:intergenic |
| CAAACTGCTTTCTTAGTTGG+CGG | 0.463190 | 4.4:+42517420 | MS.gene61101:CDS |
| TCATGCTGCCTGGGAAGCAC+TGG | 0.468375 | 4.4:+42517838 | MS.gene61101:CDS |
| CGCCAACTAAGAAAGCAGTT+TGG | 0.468480 | 4.4:-42517419 | None:intergenic |
| ATAATCCAGAAGTGCTCCTT+CGG | 0.475177 | 4.4:+42516378 | MS.gene61101:CDS |
| TTCTCCTGTAATTTACGCCA+TGG | 0.476208 | 4.4:+42515428 | MS.gene61101:CDS |
| ATTGAATAAGATTCCTCTCC+AGG | 0.480234 | 4.4:+42517101 | MS.gene61101:CDS |
| TCTTCAGGTTGCTTTATCCA+TGG | 0.482081 | 4.4:+42518361 | MS.gene61101:CDS |
| ATTTGTAGCACCTTGAACTA+GGG | 0.497394 | 4.4:-42516411 | None:intergenic |
| TTTGTACAAGTGCCTGAAAG+TGG | 0.498510 | 4.4:+42515489 | MS.gene61101:CDS |
| GAAAGATAATGCAGCAGCAC+AGG | 0.500851 | 4.4:-42517604 | None:intergenic |
| TTGACATGATTGTCCAACTC+TGG | 0.511635 | 4.4:+42515523 | MS.gene61101:CDS |
| TACAGGTTGGGCAGTACCCT+CGG | 0.514602 | 4.4:+42518322 | MS.gene61101:intron |
| CCTGTAATTTACGCCATGGA+TGG | 0.522859 | 4.4:+42515432 | MS.gene61101:CDS |
| CATGACGAACAGCTCTAGTC+GGG | 0.524027 | 4.4:-42517820 | None:intergenic |
| TTGGACAATCATGTCAAGGA+TGG | 0.533101 | 4.4:-42515517 | None:intergenic |
| GATTCATAAGAAGCTTCAAC+GGG | 0.542429 | 4.4:+42514353 | MS.gene61101:CDS |
| GTAAAAGATTGTCCGAATGC+AGG | 0.543724 | 4.4:-42518418 | None:intergenic |
| TCATTCACAAATATATCTGC+AGG | 0.545748 | 4.4:-42517444 | None:intergenic |
| CAAATGACTGACTCCAGAGT+TGG | 0.548174 | 4.4:-42515536 | None:intergenic |
| GAAACACAACGGACCATCCA+TGG | 0.553280 | 4.4:-42515445 | None:intergenic |
| TTCTTACACGAAATATAGAC+TGG | 0.556069 | 4.4:-42516929 | None:intergenic |
| ACAGCTCTAGTCGGGTACAT+TGG | 0.557826 | 4.4:-42517812 | None:intergenic |
| AACAAACTAATGAGATGCCG+AGG | 0.563733 | 4.4:-42518339 | None:intergenic |
| TGGACAATCATGTCAAGGAT+GGG | 0.572002 | 4.4:-42515516 | None:intergenic |
| GTCGGGTACATTGGACCACC+AGG | 0.572378 | 4.4:-42517803 | None:intergenic |
| GCATGACGAACAGCTCTAGT+CGG | 0.576852 | 4.4:-42517821 | None:intergenic |
| ACAAAGTTCCAGCAAGAGGA+TGG | 0.582995 | 4.4:-42518390 | None:intergenic |
| CGATTCATAAGAAGCTTCAA+CGG | 0.588835 | 4.4:+42514352 | MS.gene61101:CDS |
| GAGGTTGATGATCGAGCCAA+AGG | 0.590258 | 4.4:+42514536 | MS.gene61101:CDS |
| CTGATAGGGTATACCTGGAG+AGG | 0.599368 | 4.4:-42517114 | None:intergenic |
| CCAGCTTCAAAAGCTAAAGG+TGG | 0.599881 | 4.4:+42517579 | MS.gene61101:intron |
| CAAGAGGATGGCCAATACCA+TGG | 0.605415 | 4.4:-42518378 | None:intergenic |
| AATCACAAAGTTCCAGCAAG+AGG | 0.620726 | 4.4:-42518394 | None:intergenic |
| TCTCGGCGGCGAATTAGCGT+CGG | 0.631890 | 4.4:-42514298 | None:intergenic |
| AGAGTTGGACAATCATGTCA+AGG | 0.632220 | 4.4:-42515521 | None:intergenic |
| TTGACATTCAAACAAATACA+AGG | 0.632833 | 4.4:+42516901 | MS.gene61101:CDS |
| AGAAAGCAGTTTGGAAAACA+GGG | 0.635503 | 4.4:-42517410 | None:intergenic |
| CCTCTGCGACGAATTTGCCA+AGG | 0.637071 | 4.4:-42514474 | None:intergenic |
| CCTTGGCAAATTCGTCGCAG+AGG | 0.660365 | 4.4:+42514474 | MS.gene61101:CDS |
| GAATCTTATTCAATCGAGTG+TGG | 0.672963 | 4.4:-42517092 | None:intergenic |
| ATACCCATTTGTGAAACAGG+AGG | 0.674414 | 4.4:-42515575 | None:intergenic |
| CTAGGGCAGATGAATACCGA+AGG | 0.681129 | 4.4:-42516394 | None:intergenic |
| ACAAACTAATGAGATGCCGA+GGG | 0.696864 | 4.4:-42518338 | None:intergenic |
| AGCACATCATAGAAACACAA+CGG | 0.709751 | 4.4:-42515456 | None:intergenic |
| TGGTTGATGTAGTACCCTGA+AGG | 0.723094 | 4.4:-42517639 | None:intergenic |
| GTAATGCAACATCATCCAAG+AGG | 0.729405 | 4.4:-42517068 | None:intergenic |
| AGATAACCGGAATTTCTCGG+CGG | 0.785455 | 4.4:-42514312 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTATATATTTTTTAATTTT+GGG | + | chr4.4:42516068-42516087 | MS.gene61101:intron | 0.0% |
| !!! | TATTATATATTTTTTAATTT+TGG | + | chr4.4:42516067-42516086 | MS.gene61101:intron | 0.0% |
| !! | ACATAAGTTAAATTAAATAT+AGG | - | chr4.4:42516967-42516986 | None:intergenic | 10.0% |
| !!! | AAATTAAAATGTTACTTAAA+TGG | + | chr4.4:42516462-42516481 | MS.gene61101:intron | 10.0% |
| !! | GTATATTTGAATCTAAATAA+GGG | + | chr4.4:42515265-42515284 | MS.gene61101:intron | 15.0% |
| !! | TAAACAATAAAAATTCTAAC+CGG | - | chr4.4:42517875-42517894 | None:intergenic | 15.0% |
| !! | TATATTATTATATCCCATTT+AGG | - | chr4.4:42516617-42516636 | None:intergenic | 15.0% |
| !! | TATATTTGAATCTAAATAAG+GGG | + | chr4.4:42515266-42515285 | MS.gene61101:intron | 15.0% |
| !! | TGTATATTTGAATCTAAATA+AGG | + | chr4.4:42515264-42515283 | MS.gene61101:intron | 15.0% |
| !! | TTTAAGAAATGAGTTAAAAA+GGG | - | chr4.4:42518147-42518166 | None:intergenic | 15.0% |
| !!! | AAATATTGATGTTGTTTTTA+TGG | + | chr4.4:42518294-42518313 | MS.gene61101:intron | 15.0% |
| !!! | ATAATCTTTATTTTCTTGAT+AGG | + | chr4.4:42515292-42515311 | MS.gene61101:intron | 15.0% |
| !!! | TAATCTTTATTTTCTTGATA+GGG | + | chr4.4:42515293-42515312 | MS.gene61101:intron | 15.0% |
| !!! | TCTAGCAATTTATTTTAATT+TGG | - | chr4.4:42517914-42517933 | None:intergenic | 15.0% |
| !!! | TTATTTTCTTAAATTACTAC+AGG | - | chr4.4:42514649-42514668 | None:intergenic | 15.0% |
| !!! | TTTTTAACTCATTTCTTAAA+GGG | + | chr4.4:42518147-42518166 | MS.gene61101:intron | 15.0% |
| !! | ATATAATATGCATTAGTTCA+TGG | - | chr4.4:42516055-42516074 | None:intergenic | 20.0% |
| !! | ATGGGATATAATAATATATG+TGG | + | chr4.4:42516619-42516638 | MS.gene61101:intron | 20.0% |
| !! | ATTATGTTACCTTTAATCAT+TGG | + | chr4.4:42517539-42517558 | MS.gene61101:intron | 20.0% |
| !! | CCACTCTATAAATAATTATA+CGG | - | chr4.4:42515959-42515978 | None:intergenic | 20.0% |
| !! | CTATTCAAGATTAGAAAAAT+AGG | + | chr4.4:42515170-42515189 | MS.gene61101:intron | 20.0% |
| !! | TAGAAATGTCATATTTGTAT+TGG | + | chr4.4:42515118-42515137 | MS.gene61101:intron | 20.0% |
| !! | TGGGATATAATAATATATGT+GGG | + | chr4.4:42516620-42516639 | MS.gene61101:intron | 20.0% |
| !!! | AATCTTTATTTTCTTGATAG+GGG | + | chr4.4:42515294-42515313 | MS.gene61101:intron | 20.0% |
| !!! | ACATTTTAATTTATAACAGC+CGG | - | chr4.4:42516454-42516473 | None:intergenic | 20.0% |
| !!! | ATATTGGATTGTTATTGAAA+CGG | - | chr4.4:42516717-42516736 | None:intergenic | 20.0% |
| !!! | ATTTTTGAGGTCTTTTTTAT+GGG | + | chr4.4:42518021-42518040 | MS.gene61101:intron | 20.0% |
| !!! | CTTTAAGAAATGAGTTAAAA+AGG | - | chr4.4:42518148-42518167 | None:intergenic | 20.0% |
| !!! | CTTTTTAACTCATTTCTTAA+AGG | + | chr4.4:42518146-42518165 | MS.gene61101:intron | 20.0% |
| !!! | GATCAATTAAAAGATTTTTG+AGG | + | chr4.4:42518008-42518027 | MS.gene61101:intron | 20.0% |
| !!! | TAAAATGAGATTTTCATGTA+AGG | + | chr4.4:42514976-42514995 | MS.gene61101:intron | 20.0% |
| !!! | TATAATTTTGCAAAAAGACA+AGG | + | chr4.4:42516486-42516505 | MS.gene61101:intron | 20.0% |
| !!! | TTCATTCTATTTTACAATTC+AGG | + | chr4.4:42517279-42517298 | MS.gene61101:CDS | 20.0% |
| !!! | TTTTATTTAGTGTGATAGTA+TGG | + | chr4.4:42515643-42515662 | MS.gene61101:intron | 20.0% |
| ! | AAAAGAGTGAATGATTTGAA+TGG | + | chr4.4:42514854-42514873 | MS.gene61101:intron | 25.0% |
| ! | AAAGTCCTATAAACAATTGT+TGG | - | chr4.4:42517168-42517187 | None:intergenic | 25.0% |
| ! | AAGACAGTCTTAATAACATT+TGG | - | chr4.4:42516782-42516801 | None:intergenic | 25.0% |
| ! | AATATCATACAGTCAAATTG+AGG | - | chr4.4:42515765-42515784 | None:intergenic | 25.0% |
| ! | AATTCAAAACCAGCAATTAA+TGG | - | chr4.4:42515669-42515688 | None:intergenic | 25.0% |
| ! | AATTTGACTGTATGATATTC+TGG | + | chr4.4:42515766-42515785 | MS.gene61101:intron | 25.0% |
| ! | ATCCATTAAAAAACACAGTT+TGG | + | chr4.4:42516748-42516767 | MS.gene61101:intron | 25.0% |
| ! | CCGTATAATTATTTATAGAG+TGG | + | chr4.4:42515956-42515975 | MS.gene61101:intron | 25.0% |
| ! | GCATTATCTTTCAGAAATTA+AGG | + | chr4.4:42517615-42517634 | MS.gene61101:CDS | 25.0% |
| ! | TCAGAAAGCAAAAAACAATA+CGG | - | chr4.4:42515616-42515635 | None:intergenic | 25.0% |
| ! | TCTTTATGAACAACATGTAT+TGG | + | chr4.4:42515008-42515027 | MS.gene61101:intron | 25.0% |
| ! | TGAAATGAAATATACCCAAA+AGG | - | chr4.4:42516172-42516191 | None:intergenic | 25.0% |
| ! | TGATCTCAATAATGAAAGAT+GGG | - | chr4.4:42517993-42518012 | None:intergenic | 25.0% |
| ! | TGTTAGCATAAACAAAAGAA+TGG | - | chr4.4:42517720-42517739 | None:intergenic | 25.0% |
| ! | TTAAATTTCCAACTGATTAC+AGG | + | chr4.4:42518078-42518097 | MS.gene61101:intron | 25.0% |
| ! | TTATGTGTATCATCTGAATA+AGG | + | chr4.4:42516981-42517000 | MS.gene61101:intron | 25.0% |
| ! | TTGACATTCAAACAAATACA+AGG | + | chr4.4:42516901-42516920 | MS.gene61101:CDS | 25.0% |
| ! | TTGATCTCAATAATGAAAGA+TGG | - | chr4.4:42517994-42518013 | None:intergenic | 25.0% |
| ! | TTTATGCGGAGAAAAAAAAA+TGG | + | chr4.4:42514384-42514403 | MS.gene61101:intron | 25.0% |
| !! | ATAGGAACTTGTATTTCTTT+TGG | - | chr4.4:42516265-42516284 | None:intergenic | 25.0% |
| !! | ATTGATAACCATGTTAAATG+AGG | + | chr4.4:42515207-42515226 | MS.gene61101:intron | 25.0% |
| !! | CTAAGGATTAAATCTAAAAC+CGG | - | chr4.4:42515883-42515902 | None:intergenic | 25.0% |
| !! | GGAAATGCAATAATTGTTTT+TGG | + | chr4.4:42516864-42516883 | MS.gene61101:intron | 25.0% |
| !! | TTGTATTTCTTTTGGCAATA+TGG | - | chr4.4:42516257-42516276 | None:intergenic | 25.0% |
| !!! | AACTGTGTTTTTTAATGGAT+AGG | - | chr4.4:42516748-42516767 | None:intergenic | 25.0% |
| !!! | AATTTTTGTTTTGATGCTAC+AGG | + | chr4.4:42514451-42514470 | MS.gene61101:intron | 25.0% |
| !!! | ATCTTTATTTTCTTGATAGG+GGG | + | chr4.4:42515295-42515314 | MS.gene61101:intron | 25.0% |
| !!! | ATGGTTTTTAGTTCATTGTT+TGG | + | chr4.4:42514933-42514952 | MS.gene61101:intron | 25.0% |
| !!! | ATTCTTTTGTTTATGCTAAC+AGG | + | chr4.4:42517719-42517738 | MS.gene61101:intron | 25.0% |
| !!! | ATTGTTTTTTGCTTTCTGAA+GGG | + | chr4.4:42515617-42515636 | MS.gene61101:intron | 25.0% |
| !!! | CTGATAGGAAATGTTTTTTT+GGG | - | chr4.4:42517953-42517972 | None:intergenic | 25.0% |
| !!! | GATTTTTGAGGTCTTTTTTA+TGG | + | chr4.4:42518020-42518039 | MS.gene61101:intron | 25.0% |
| !!! | GTTTTTTTAAAATGACCAGA+TGG | + | chr4.4:42518112-42518131 | MS.gene61101:intron | 25.0% |
| !!! | TAGAATTTGCTATGAGAATT+TGG | + | chr4.4:42516103-42516122 | MS.gene61101:intron | 25.0% |
| !!! | TATAATTTTGCTATGTCACT+TGG | + | chr4.4:42515088-42515107 | MS.gene61101:intron | 25.0% |
| !!! | TATTGTTTTTTGCTTTCTGA+AGG | + | chr4.4:42515616-42515635 | MS.gene61101:intron | 25.0% |
| !!! | TCTGATAGGAAATGTTTTTT+TGG | - | chr4.4:42517954-42517973 | None:intergenic | 25.0% |
| !!! | TTGTTTTTATGGTATCATAC+AGG | + | chr4.4:42518305-42518324 | MS.gene61101:intron | 25.0% |
| AAAGTCAATCAGAAACTGAT+AGG | - | chr4.4:42516283-42516302 | None:intergenic | 30.0% | |
| AAATAAAGAAAACCTCCACT+TGG | - | chr4.4:42515367-42515386 | None:intergenic | 30.0% | |
| AAGATCGTGCTTATGAATTA+CGG | - | chr4.4:42518243-42518262 | None:intergenic | 30.0% | |
| ACCATTGCATCATTATTCAT+AGG | - | chr4.4:42517328-42517347 | None:intergenic | 30.0% | |
| ATTTCGTGTAAGAATTCTAG+TGG | + | chr4.4:42516938-42516957 | MS.gene61101:intron | 30.0% | |
| CAAAGAACATGCAAAAGAAA+TGG | - | chr4.4:42517028-42517047 | None:intergenic | 30.0% | |
| CAATATTTCCTGTAATCAGT+TGG | - | chr4.4:42518089-42518108 | None:intergenic | 30.0% | |
| CAATTGACACCAATGATTAA+AGG | - | chr4.4:42517551-42517570 | None:intergenic | 30.0% | |
| CATGTTTGGAAAATCATTCA+GGG | + | chr4.4:42516843-42516862 | MS.gene61101:intron | 30.0% | |
| GCAAACTAATATGAACTTTG+TGG | - | chr4.4:42518189-42518208 | None:intergenic | 30.0% | |
| GTCTTGTATTGCTAAATGTA+AGG | + | chr4.4:42515036-42515055 | MS.gene61101:intron | 30.0% | |
| GTTATTAAGACTGTCTTCAT+GGG | + | chr4.4:42516785-42516804 | MS.gene61101:intron | 30.0% | |
| TATTATATCCCATTTAGGAG+TGG | - | chr4.4:42516612-42516631 | None:intergenic | 30.0% | |
| TCAAAAGCTACAATTACCTT+TGG | - | chr4.4:42514555-42514574 | None:intergenic | 30.0% | |
| TCATTCACAAATATATCTGC+AGG | - | chr4.4:42517447-42517466 | None:intergenic | 30.0% | |
| TGGATAGGATAAAGTCATAT+TGG | - | chr4.4:42516733-42516752 | None:intergenic | 30.0% | |
| TGTAAGTGTATTGAGAAGTT+AGG | - | chr4.4:42516338-42516357 | None:intergenic | 30.0% | |
| TGTAATGTAATTGACTGACA+CGG | + | chr4.4:42514669-42514688 | MS.gene61101:intron | 30.0% | |
| TGTATTCTCCTCATTTAACA+TGG | - | chr4.4:42515218-42515237 | None:intergenic | 30.0% | |
| TGTTATTAAGACTGTCTTCA+TGG | + | chr4.4:42516784-42516803 | MS.gene61101:intron | 30.0% | |
| TTCTTACACGAAATATAGAC+TGG | - | chr4.4:42516932-42516951 | None:intergenic | 30.0% | |
| TTTATGGTATCATACAGGTT+GGG | + | chr4.4:42518310-42518329 | MS.gene61101:intron | 30.0% | |
| TTTCGTGTAAGAATTCTAGT+GGG | + | chr4.4:42516939-42516958 | MS.gene61101:intron | 30.0% | |
| TTTGTTTATGCTAACAGGTA+TGG | + | chr4.4:42517724-42517743 | MS.gene61101:intron | 30.0% | |
| ! | AATTTTGCAAAAAGACAAGG+TGG | + | chr4.4:42516489-42516508 | MS.gene61101:intron | 30.0% |
| ! | ACAATCTTTTACTCCTTACT+CGG | + | chr4.4:42518429-42518448 | MS.gene61101:CDS | 30.0% |
| ! | GACAGATGTAATTTTCAACA+AGG | + | chr4.4:42515392-42515411 | MS.gene61101:intron | 30.0% |
| ! | GAGTTGGGATTTTATTAATG+CGG | + | chr4.4:42517142-42517161 | MS.gene61101:intron | 30.0% |
| ! | TTTTATGGTATCATACAGGT+TGG | + | chr4.4:42518309-42518328 | MS.gene61101:intron | 30.0% |
| !! | ATAGGCTTTCATTTGTTGTA+AGG | + | chr4.4:42516222-42516241 | MS.gene61101:intron | 30.0% |
| !! | ATCTCATTAGTTTGTTCTTC+AGG | + | chr4.4:42518346-42518365 | MS.gene61101:CDS | 30.0% |
| !! | ATGTTTTCTGGTATGAATAC+CGG | + | chr4.4:42516432-42516451 | MS.gene61101:intron | 30.0% |
| !! | CTACTTTTCATTGAACTATC+AGG | + | chr4.4:42517224-42517243 | MS.gene61101:intron | 30.0% |
| !! | GTTATGTTTTTACAGAGTAC+TGG | + | chr4.4:42516125-42516144 | MS.gene61101:intron | 30.0% |
| !! | TTGTATAGTTTTACTTCTCC+TGG | + | chr4.4:42517785-42517804 | MS.gene61101:CDS | 30.0% |
| !!! | CGGTTTTAGATTTAATCCTT+AGG | + | chr4.4:42515881-42515900 | MS.gene61101:intron | 30.0% |
| !!! | TGCCAAACTGTGTTTTTTAA+TGG | - | chr4.4:42516753-42516772 | None:intergenic | 30.0% |
| AAACAAGAATTACCAAGTGG+AGG | + | chr4.4:42515352-42515371 | MS.gene61101:intron | 35.0% | |
| AAACCTCTACTATGATAGAG+TGG | + | chr4.4:42516811-42516830 | MS.gene61101:intron | 35.0% | |
| AAAGGGAAAAAGTAACCATC+TGG | - | chr4.4:42518130-42518149 | None:intergenic | 35.0% | |
| AACCATTCAGGTGCAATAAT+TGG | + | chr4.4:42517657-42517676 | MS.gene61101:intron | 35.0% | |
| AACCTCTACTATGATAGAGT+GGG | + | chr4.4:42516812-42516831 | MS.gene61101:intron | 35.0% | |
| AAGAAAGCAGTTTGGAAAAC+AGG | - | chr4.4:42517414-42517433 | None:intergenic | 35.0% | |
| AATTTCTTCATATGAGCCAG+AGG | - | chr4.4:42517522-42517541 | None:intergenic | 35.0% | |
| ACTTTGTGATTTCCTGCATT+CGG | + | chr4.4:42518406-42518425 | MS.gene61101:CDS | 35.0% | |
| AGAAAATATCAACCCGAGTA+AGG | - | chr4.4:42518445-42518464 | None:intergenic | 35.0% | |
| AGAAAGCAGTTTGGAAAACA+GGG | - | chr4.4:42517413-42517432 | None:intergenic | 35.0% | |
| AGCACATCATAGAAACACAA+CGG | - | chr4.4:42515459-42515478 | None:intergenic | 35.0% | |
| ATAGTATGGCCATTAATTGC+TGG | + | chr4.4:42515657-42515676 | MS.gene61101:intron | 35.0% | |
| ATTGAATAAGATTCCTCTCC+AGG | + | chr4.4:42517101-42517120 | MS.gene61101:CDS | 35.0% | |
| ATTTGTAGCACCTTGAACTA+GGG | - | chr4.4:42516414-42516433 | None:intergenic | 35.0% | |
| CCATGTTTGGAAAATCATTC+AGG | + | chr4.4:42516842-42516861 | MS.gene61101:intron | 35.0% | |
| CGATTCATAAGAAGCTTCAA+CGG | + | chr4.4:42514352-42514371 | MS.gene61101:CDS | 35.0% | |
| CTGGAAAATTGTACTCTGAT+AGG | - | chr4.4:42517968-42517987 | None:intergenic | 35.0% | |
| GAATCTTATTCAATCGAGTG+TGG | - | chr4.4:42517095-42517114 | None:intergenic | 35.0% | |
| GATTCAATAGCTATGAAGCA+GGG | + | chr4.4:42514598-42514617 | MS.gene61101:intron | 35.0% | |
| GATTCATAAGAAGCTTCAAC+GGG | + | chr4.4:42514353-42514372 | MS.gene61101:CDS | 35.0% | |
| GCAAAACAAGAATTACCAAG+TGG | + | chr4.4:42515349-42515368 | MS.gene61101:intron | 35.0% | |
| GCCTATGAATAATGATGCAA+TGG | + | chr4.4:42517324-42517343 | MS.gene61101:intron | 35.0% | |
| GTTTGTCAAATGCTTGAAAC+CGG | + | chr4.4:42515861-42515880 | MS.gene61101:intron | 35.0% | |
| TAAAACTGATAGGGTATACC+TGG | - | chr4.4:42517122-42517141 | None:intergenic | 35.0% | |
| TACATACCCATTTGTGAAAC+AGG | - | chr4.4:42515581-42515600 | None:intergenic | 35.0% | |
| TACTCCAAATGATCATAACC+AGG | - | chr4.4:42515814-42515833 | None:intergenic | 35.0% | |
| TATGGGTGGTATTATATGAC+TGG | + | chr4.4:42518038-42518057 | MS.gene61101:intron | 35.0% | |
| TCAGAAATTAAGGTCCTTCA+GGG | + | chr4.4:42517625-42517644 | MS.gene61101:CDS | 35.0% | |
| TGAACCTGGTTATGATCATT+TGG | + | chr4.4:42515807-42515826 | MS.gene61101:intron | 35.0% | |
| TGATTCAATAGCTATGAAGC+AGG | + | chr4.4:42514597-42514616 | MS.gene61101:intron | 35.0% | |
| TGTGAATGAACTTACTGATC+AGG | + | chr4.4:42517458-42517477 | MS.gene61101:CDS | 35.0% | |
| TGTGATGTAATTGCATGTGT+CGG | + | chr4.4:42514753-42514772 | MS.gene61101:intron | 35.0% | |
| TTACAATTCAGGTAGCCATT+TGG | + | chr4.4:42517290-42517309 | MS.gene61101:intron | 35.0% | |
| TTACCAGCTTCAAAAGCTAA+AGG | + | chr4.4:42517576-42517595 | MS.gene61101:intron | 35.0% | |
| TTCAGAAATTAAGGTCCTTC+AGG | + | chr4.4:42517624-42517643 | MS.gene61101:CDS | 35.0% | |
| TTCCAAACTGCTTTCTTAGT+TGG | + | chr4.4:42517417-42517436 | MS.gene61101:CDS | 35.0% | |
| ! | ATATGTATCTTTTGCTCTCG+AGG | + | chr4.4:42517256-42517275 | MS.gene61101:CDS | 35.0% |
| ! | CAATCTTTTACTCCTTACTC+GGG | + | chr4.4:42518430-42518449 | MS.gene61101:CDS | 35.0% |
| ! | CCTGAATGATTTTCCAAACA+TGG | - | chr4.4:42516845-42516864 | None:intergenic | 35.0% |
| ! | CTATCAGAGTACAATTTTCC+AGG | + | chr4.4:42517966-42517985 | MS.gene61101:intron | 35.0% |
| ! | TTATCTTGTTTGCATGCTCA+TGG | + | chr4.4:42514914-42514933 | MS.gene61101:intron | 35.0% |
| !! | AAGGTGCTACAAATGTTTTC+TGG | + | chr4.4:42516420-42516439 | MS.gene61101:CDS | 35.0% |
| !! | AGCACTGGATTTTCTTTTTC+CGG | + | chr4.4:42517853-42517872 | MS.gene61101:CDS | 35.0% |
| !! | ATCCCAACTCTAAAACTGAT+AGG | - | chr4.4:42517132-42517151 | None:intergenic | 35.0% |
| !! | TATAGTTTTACTTCTCCTGG+TGG | + | chr4.4:42517788-42517807 | MS.gene61101:CDS | 35.0% |
| !! | TCCCAACTCTAAAACTGATA+GGG | - | chr4.4:42517131-42517150 | None:intergenic | 35.0% |
| !! | TTTATTTTCTTGATAGGGGG+TGG | + | chr4.4:42515298-42515317 | MS.gene61101:intron | 35.0% |
| !!! | AACGGGTGAGTTTTTTTATG+CGG | + | chr4.4:42514370-42514389 | MS.gene61101:intron | 35.0% |
| !!! | ACCCTATCAGTTTTAGAGTT+GGG | + | chr4.4:42517127-42517146 | MS.gene61101:intron | 35.0% |
| !!! | CGGGTTGATATTTTCTACAT+GGG | + | chr4.4:42518449-42518468 | MS.gene61101:CDS | 35.0% |
| !!! | TACCCTATCAGTTTTAGAGT+TGG | + | chr4.4:42517126-42517145 | MS.gene61101:intron | 35.0% |
| !!! | TAGGAAATGTTTTTTTGGGC+TGG | - | chr4.4:42517949-42517968 | None:intergenic | 35.0% |
| !!! | TATTCCCGTTCTGTTTTTGA+GGG | + | chr4.4:42516194-42516213 | MS.gene61101:intron | 35.0% |
| !!! | TCGGGTTGATATTTTCTACA+TGG | + | chr4.4:42518448-42518467 | MS.gene61101:CDS | 35.0% |
| !!! | TTATTCCCGTTCTGTTTTTG+AGG | + | chr4.4:42516193-42516212 | MS.gene61101:intron | 35.0% |
| !!! | TTGTTTTTGGTGACATGTAC+AGG | + | chr4.4:42516877-42516896 | MS.gene61101:intron | 35.0% |
| !!! | TTTGAGGTCTTTTTTATGGG+TGG | + | chr4.4:42518024-42518043 | MS.gene61101:intron | 35.0% |
| !!! | TTTTGCTGATGTAGCTTTAG+AGG | + | chr4.4:42514517-42514536 | MS.gene61101:CDS | 35.0% |
| AACAAACTAATGAGATGCCG+AGG | - | chr4.4:42518342-42518361 | None:intergenic | 40.0% | |
| AATATTATCCTCTCTGCAGC+TGG | + | chr4.4:42517360-42517379 | MS.gene61101:intron | 40.0% | |
| AATCACAAAGTTCCAGCAAG+AGG | - | chr4.4:42518397-42518416 | None:intergenic | 40.0% | |
| ACAAACTAATGAGATGCCGA+GGG | - | chr4.4:42518341-42518360 | None:intergenic | 40.0% | |
| AGAGTTGGACAATCATGTCA+AGG | - | chr4.4:42515524-42515543 | None:intergenic | 40.0% | |
| AGGCTAATGACATCTCCAAA+TGG | - | chr4.4:42517308-42517327 | None:intergenic | 40.0% | |
| AGTTTGCAACATAGCACTAG+TGG | + | chr4.4:42518202-42518221 | MS.gene61101:intron | 40.0% | |
| ATACCCATTTGTGAAACAGG+AGG | - | chr4.4:42515578-42515597 | None:intergenic | 40.0% | |
| CAAACTGCTTTCTTAGTTGG+CGG | + | chr4.4:42517420-42517439 | MS.gene61101:CDS | 40.0% | |
| CAATAATGAAAGATGGGACC+TGG | - | chr4.4:42517987-42518006 | None:intergenic | 40.0% | |
| CATTTGTAGCACCTTGAACT+AGG | - | chr4.4:42516415-42516434 | None:intergenic | 40.0% | |
| GCAATGACTCTTCAAATCGA+AGG | - | chr4.4:42514791-42514810 | None:intergenic | 40.0% | |
| GTAAAAGATTGTCCGAATGC+AGG | - | chr4.4:42518421-42518440 | None:intergenic | 40.0% | |
| GTAACCCCTCAAAAACAGAA+CGG | - | chr4.4:42516202-42516221 | None:intergenic | 40.0% | |
| GTAATGCAACATCATCCAAG+AGG | - | chr4.4:42517071-42517090 | None:intergenic | 40.0% | |
| GTCCAATTATTGCACCTGAA+TGG | - | chr4.4:42517662-42517681 | None:intergenic | 40.0% | |
| TAACCCCTCAAAAACAGAAC+GGG | - | chr4.4:42516201-42516220 | None:intergenic | 40.0% | |
| TAGCCTCCTGTTTCACAAAT+GGG | + | chr4.4:42515572-42515591 | MS.gene61101:CDS | 40.0% | |
| TAGTATGCACTGAGTTCCTA+AGG | - | chr4.4:42515900-42515919 | None:intergenic | 40.0% | |
| TATCCCATTTAGGAGTGGAT+TGG | - | chr4.4:42516607-42516626 | None:intergenic | 40.0% | |
| TATTCATCTGCCCTAGTTCA+AGG | + | chr4.4:42516401-42516420 | MS.gene61101:CDS | 40.0% | |
| TCAGGTGCAATAATTGGACA+TGG | + | chr4.4:42517663-42517682 | MS.gene61101:intron | 40.0% | |
| TCGAGATAACCGGAATTTCT+CGG | - | chr4.4:42514318-42514337 | None:intergenic | 40.0% | |
| TGCGGCCAACAATTGTTTAT+AGG | + | chr4.4:42517160-42517179 | MS.gene61101:intron | 40.0% | |
| TGGACAATCATGTCAAGGAT+GGG | - | chr4.4:42515519-42515538 | None:intergenic | 40.0% | |
| TTAGCCTCCTGTTTCACAAA+TGG | + | chr4.4:42515571-42515590 | MS.gene61101:CDS | 40.0% | |
| TTCATATGAGCCAGAGGATA+CGG | - | chr4.4:42517516-42517535 | None:intergenic | 40.0% | |
| TTCTCCTGTAATTTACGCCA+TGG | + | chr4.4:42515428-42515447 | MS.gene61101:CDS | 40.0% | |
| TTGACATGATTGTCCAACTC+TGG | + | chr4.4:42515523-42515542 | MS.gene61101:CDS | 40.0% | |
| TTGGACAATCATGTCAAGGA+TGG | - | chr4.4:42515520-42515539 | None:intergenic | 40.0% | |
| TTTGTACAAGTGCCTGAAAG+TGG | + | chr4.4:42515489-42515508 | MS.gene61101:CDS | 40.0% | |
| ! | AAGAGTCACTCTTGATGACA+TGG | + | chr4.4:42515715-42515734 | MS.gene61101:intron | 40.0% |
| ! | AAGCATGATAGTGTTGTGCA+TGG | + | chr4.4:42514890-42514909 | MS.gene61101:intron | 40.0% |
| ! | GCAAAAAGACAAGGTGGATT+TGG | + | chr4.4:42516495-42516514 | MS.gene61101:intron | 40.0% |
| ! | GGTTGCTTTATCCATGGTAT+TGG | + | chr4.4:42518367-42518386 | MS.gene61101:CDS | 40.0% |
| !! | ACAGAGTACTGGTTTGAGAT+GGG | + | chr4.4:42516136-42516155 | MS.gene61101:intron | 40.0% |
| !! | ATAATCCAGAAGTGCTCCTT+CGG | + | chr4.4:42516378-42516397 | MS.gene61101:CDS | 40.0% |
| !! | CCAAGAGGTACTGAATTTGA+GGG | - | chr4.4:42517056-42517075 | None:intergenic | 40.0% |
| !! | TACAGAGTACTGGTTTGAGA+TGG | + | chr4.4:42516135-42516154 | MS.gene61101:intron | 40.0% |
| !! | TCCAAGAGGTACTGAATTTG+AGG | - | chr4.4:42517057-42517076 | None:intergenic | 40.0% |
| !! | TCTTCAGGTTGCTTTATCCA+TGG | + | chr4.4:42518361-42518380 | MS.gene61101:CDS | 40.0% |
| !!! | ATGGGATGGTTTTGTCCTTT+TGG | + | chr4.4:42516154-42516173 | MS.gene61101:intron | 40.0% |
| !!! | ATTCCCGTTCTGTTTTTGAG+GGG | + | chr4.4:42516195-42516214 | MS.gene61101:intron | 40.0% |
| !!! | CTGTTTTTGAGGGGTTACAT+AGG | + | chr4.4:42516204-42516223 | MS.gene61101:intron | 40.0% |
| !!! | TGGGATGGTTTTGTCCTTTT+GGG | + | chr4.4:42516155-42516174 | MS.gene61101:intron | 40.0% |
| AAGAAAATCCAGTGCTTCCC+AGG | - | chr4.4:42517849-42517868 | None:intergenic | 45.0% | |
| AAGAATGGCTTAGCTGAGTC+AGG | - | chr4.4:42517705-42517724 | None:intergenic | 45.0% | |
| ACAAAGTTCCAGCAAGAGGA+TGG | - | chr4.4:42518393-42518412 | None:intergenic | 45.0% | |
| ACGGCTCTCATTTGTGAACA+AGG | - | chr4.4:42517497-42517516 | None:intergenic | 45.0% | |
| AGATAACCGGAATTTCTCGG+CGG | - | chr4.4:42514315-42514334 | None:intergenic | 45.0% | |
| CCAGCTTCAAAAGCTAAAGG+TGG | + | chr4.4:42517579-42517598 | MS.gene61101:intron | 45.0% | |
| CCATCCATGGCGTAAATTAC+AGG | - | chr4.4:42515435-42515454 | None:intergenic | 45.0% | |
| CCCTCAAATTCAGTACCTCT+TGG | + | chr4.4:42517053-42517072 | MS.gene61101:intron | 45.0% | |
| CCTGTAATTTACGCCATGGA+TGG | + | chr4.4:42515432-42515451 | MS.gene61101:CDS | 45.0% | |
| CGCCAACTAAGAAAGCAGTT+TGG | - | chr4.4:42517422-42517441 | None:intergenic | 45.0% | |
| GAAAGATAATGCAGCAGCAC+AGG | - | chr4.4:42517607-42517626 | None:intergenic | 45.0% | |
| GCTCCAATCCACTCCTAAAT+GGG | + | chr4.4:42516601-42516620 | MS.gene61101:intron | 45.0% | |
| GGGTACTACATCAACCATTC+AGG | + | chr4.4:42517645-42517664 | MS.gene61101:intron | 45.0% | |
| TAATTGCATGTGTCGGACAG+CGG | + | chr4.4:42514760-42514779 | MS.gene61101:intron | 45.0% | |
| TGCCCACTCTATCATAGTAG+AGG | - | chr4.4:42516817-42516836 | None:intergenic | 45.0% | |
| ! | CAAATGACTGACTCCAGAGT+TGG | - | chr4.4:42515539-42515558 | None:intergenic | 45.0% |
| ! | CAAGGTGGATTTGGATTTGC+TGG | + | chr4.4:42516504-42516523 | MS.gene61101:intron | 45.0% |
| ! | TGGTTGATGTAGTACCCTGA+AGG | - | chr4.4:42517642-42517661 | None:intergenic | 45.0% |
| ! | TTAGCTAGTCTCGCAAGCAA+TGG | + | chr4.4:42517187-42517206 | MS.gene61101:intron | 45.0% |
| !! | AGAGAGAGCATCGAGATAAC+CGG | - | chr4.4:42514328-42514347 | None:intergenic | 45.0% |
| !! | AGGATGGGTTTTCCACTTTC+AGG | - | chr4.4:42515504-42515523 | None:intergenic | 45.0% |
| !! | AGTACTGGTTTGAGATGGGA+TGG | + | chr4.4:42516140-42516159 | MS.gene61101:intron | 45.0% |
| !!! | CCACCTTTAGCTTTTGAAGC+TGG | - | chr4.4:42517582-42517601 | None:intergenic | 45.0% |
| !!! | TGTTTTGATGCTACAGGCCT+TGG | + | chr4.4:42514457-42514476 | MS.gene61101:intron | 45.0% |
| AATTCGCCGCCGAGAAATTC+CGG | + | chr4.4:42514306-42514325 | MS.gene61101:CDS | 50.0% | |
| ACGATCTTCATGCAGACACC+AGG | + | chr4.4:42518255-42518274 | MS.gene61101:intron | 50.0% | |
| ATGCTCAGTGTCTCTGAACC+TGG | + | chr4.4:42515793-42515812 | MS.gene61101:intron | 50.0% | |
| CAAATGAGAGCCGTATCCTC+TGG | + | chr4.4:42517503-42517522 | MS.gene61101:intron | 50.0% | |
| CAAGAGGATGGCCAATACCA+TGG | - | chr4.4:42518381-42518400 | None:intergenic | 50.0% | |
| CGCTCCAATCCACTCCTAAA+TGG | + | chr4.4:42516600-42516619 | MS.gene61101:intron | 50.0% | |
| CTAGGGCAGATGAATACCGA+AGG | - | chr4.4:42516397-42516416 | None:intergenic | 50.0% | |
| CTGATAGGGTATACCTGGAG+AGG | - | chr4.4:42517117-42517136 | None:intergenic | 50.0% | |
| GAAACACAACGGACCATCCA+TGG | - | chr4.4:42515448-42515467 | None:intergenic | 50.0% | |
| ! | ACAGCTCTAGTCGGGTACAT+TGG | - | chr4.4:42517815-42517834 | None:intergenic | 50.0% |
| ! | AGTGGGCATTGTGCCATGTT+TGG | + | chr4.4:42516829-42516848 | MS.gene61101:intron | 50.0% |
| ! | CATGACGAACAGCTCTAGTC+GGG | - | chr4.4:42517823-42517842 | None:intergenic | 50.0% |
| ! | GCATGACGAACAGCTCTAGT+CGG | - | chr4.4:42517824-42517843 | None:intergenic | 50.0% |
| !! | GAATACCGAAGGAGCACTTC+TGG | - | chr4.4:42516386-42516405 | None:intergenic | 50.0% |
| !! | GAGGTTGATGATCGAGCCAA+AGG | + | chr4.4:42514536-42514555 | MS.gene61101:CDS | 50.0% |
| !! | GCAGAGGCGTAATTTGTTGC+AGG | + | chr4.4:42514490-42514509 | MS.gene61101:CDS | 50.0% |
| AGCTGTTCGTCATGCTGCCT+GGG | + | chr4.4:42517829-42517848 | MS.gene61101:CDS | 55.0% | |
| CCTCTGCGACGAATTTGCCA+AGG | - | chr4.4:42514477-42514496 | None:intergenic | 55.0% | |
| CCTTGGCAAATTCGTCGCAG+AGG | + | chr4.4:42514474-42514493 | MS.gene61101:CDS | 55.0% | |
| TGACACTGGCACATCGACAC+TGG | + | chr4.4:42514701-42514720 | MS.gene61101:intron | 55.0% | |
| ! | CGACTTTTCCAGCTGCAGAG+AGG | - | chr4.4:42517371-42517390 | None:intergenic | 55.0% |
| ! | TACAGGTTGGGCAGTACCCT+CGG | + | chr4.4:42518322-42518341 | MS.gene61101:intron | 55.0% |
| !! | GGTATTGGCCATCCTCTTGC+TGG | + | chr4.4:42518382-42518401 | MS.gene61101:CDS | 55.0% |
| CACGGACACGACACTGACAC+TGG | + | chr4.4:42514687-42514706 | MS.gene61101:intron | 60.0% | |
| GAGCTGTTCGTCATGCTGCC+TGG | + | chr4.4:42517828-42517847 | MS.gene61101:CDS | 60.0% | |
| GTCGGGTACATTGGACCACC+AGG | - | chr4.4:42517806-42517825 | None:intergenic | 60.0% | |
| TCTCGGCGGCGAATTAGCGT+CGG | - | chr4.4:42514301-42514320 | None:intergenic | 60.0% | |
| ! | TCATGCTGCCTGGGAAGCAC+TGG | + | chr4.4:42517838-42517857 | MS.gene61101:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 42514294 | 42518500 | 42514294 | ID=MS.gene61101 |
| chr4.4 | mRNA | 42514294 | 42518500 | 42514294 | ID=MS.gene61101.t1;Parent=MS.gene61101 |
| chr4.4 | exon | 42514294 | 42514374 | 42514294 | ID=MS.gene61101.t1.exon1;Parent=MS.gene61101.t1 |
| chr4.4 | CDS | 42514294 | 42514374 | 42514294 | ID=cds.MS.gene61101.t1;Parent=MS.gene61101.t1 |
| chr4.4 | exon | 42514473 | 42514557 | 42514473 | ID=MS.gene61101.t1.exon2;Parent=MS.gene61101.t1 |
| chr4.4 | CDS | 42514473 | 42514557 | 42514473 | ID=cds.MS.gene61101.t1;Parent=MS.gene61101.t1 |
| chr4.4 | exon | 42515397 | 42515593 | 42515397 | ID=MS.gene61101.t1.exon3;Parent=MS.gene61101.t1 |
| chr4.4 | CDS | 42515397 | 42515593 | 42515397 | ID=cds.MS.gene61101.t1;Parent=MS.gene61101.t1 |
| chr4.4 | exon | 42516359 | 42516441 | 42516359 | ID=MS.gene61101.t1.exon4;Parent=MS.gene61101.t1 |
| chr4.4 | CDS | 42516359 | 42516441 | 42516359 | ID=cds.MS.gene61101.t1;Parent=MS.gene61101.t1 |
| chr4.4 | exon | 42516899 | 42516944 | 42516899 | ID=MS.gene61101.t1.exon5;Parent=MS.gene61101.t1 |
| chr4.4 | CDS | 42516899 | 42516944 | 42516899 | ID=cds.MS.gene61101.t1;Parent=MS.gene61101.t1 |
| chr4.4 | exon | 42517066 | 42517122 | 42517066 | ID=MS.gene61101.t1.exon6;Parent=MS.gene61101.t1 |
| chr4.4 | CDS | 42517066 | 42517122 | 42517066 | ID=cds.MS.gene61101.t1;Parent=MS.gene61101.t1 |
| chr4.4 | exon | 42517246 | 42517300 | 42517246 | ID=MS.gene61101.t1.exon7;Parent=MS.gene61101.t1 |
| chr4.4 | CDS | 42517246 | 42517300 | 42517246 | ID=cds.MS.gene61101.t1;Parent=MS.gene61101.t1 |
| chr4.4 | exon | 42517379 | 42517479 | 42517379 | ID=MS.gene61101.t1.exon8;Parent=MS.gene61101.t1 |
| chr4.4 | CDS | 42517379 | 42517479 | 42517379 | ID=cds.MS.gene61101.t1;Parent=MS.gene61101.t1 |
| chr4.4 | exon | 42517583 | 42517646 | 42517583 | ID=MS.gene61101.t1.exon9;Parent=MS.gene61101.t1 |
| chr4.4 | CDS | 42517583 | 42517646 | 42517583 | ID=cds.MS.gene61101.t1;Parent=MS.gene61101.t1 |
| chr4.4 | exon | 42517741 | 42517874 | 42517741 | ID=MS.gene61101.t1.exon10;Parent=MS.gene61101.t1 |
| chr4.4 | CDS | 42517741 | 42517874 | 42517741 | ID=cds.MS.gene61101.t1;Parent=MS.gene61101.t1 |
| chr4.4 | exon | 42518327 | 42518500 | 42518327 | ID=MS.gene61101.t1.exon11;Parent=MS.gene61101.t1 |
| chr4.4 | CDS | 42518327 | 42518500 | 42518327 | ID=cds.MS.gene61101.t1;Parent=MS.gene61101.t1 |
| Gene Sequence |
| Protein sequence |
