Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66728.t1 | XP_013455801.1 | 100 | 220 | 0 | 0 | 1 | 220 | 1 | 220 | 2.90E-105 | 391.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66728.t1 | Q9FMR5 | 82.4 | 221 | 38 | 1 | 1 | 220 | 1 | 221 | 1.4e-95 | 350.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66728.t1 | B7FI29 | 100.0 | 220 | 0 | 0 | 1 | 220 | 1 | 220 | 2.1e-105 | 391.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene66728 | MS.gene00315 | PPI |
| MS.gene66728 | MS.gene029336 | PPI |
| MS.gene66728 | MS.gene70862 | PPI |
| MS.gene073364 | MS.gene66728 | PPI |
| MS.gene66728 | MS.gene004575 | PPI |
| MS.gene66728 | MS.gene016966 | PPI |
| MS.gene65117 | MS.gene66728 | PPI |
| MS.gene47655 | MS.gene66728 | PPI |
| MS.gene66728 | MS.gene78212 | PPI |
| MS.gene66057 | MS.gene66728 | PPI |
| MS.gene66728 | MS.gene77217 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66728.t1 | MTR_4g052550 | 100.000 | 220 | 0 | 0 | 1 | 220 | 1 | 220 | 2.92e-165 | 454 |
| MS.gene66728.t1 | MTR_5g089370 | 56.422 | 218 | 95 | 0 | 1 | 218 | 1 | 218 | 5.90e-95 | 276 |
| MS.gene66728.t1 | MTR_4g115390 | 50.450 | 222 | 106 | 1 | 1 | 218 | 1 | 222 | 1.89e-84 | 250 |
| MS.gene66728.t1 | MTR_7g058900 | 37.037 | 216 | 133 | 3 | 1 | 214 | 4 | 218 | 6.57e-48 | 157 |
| MS.gene66728.t1 | MTR_1g047720 | 33.645 | 214 | 139 | 3 | 3 | 214 | 6 | 218 | 7.65e-48 | 157 |
| MS.gene66728.t1 | MTR_1g111890 | 33.621 | 232 | 132 | 4 | 2 | 212 | 5 | 235 | 6.71e-46 | 152 |
| MS.gene66728.t1 | MTR_4g022570 | 38.542 | 192 | 115 | 3 | 1 | 190 | 4 | 194 | 1.39e-45 | 151 |
| MS.gene66728.t1 | MTR_2g028790 | 35.789 | 190 | 119 | 3 | 3 | 190 | 10 | 198 | 6.09e-45 | 149 |
| MS.gene66728.t1 | MTR_2g436870 | 32.864 | 213 | 140 | 3 | 2 | 212 | 5 | 216 | 1.21e-43 | 146 |
| MS.gene66728.t1 | MTR_4g083490 | 34.375 | 192 | 121 | 4 | 2 | 190 | 7 | 196 | 4.69e-43 | 144 |
| MS.gene66728.t1 | MTR_7g058640 | 31.937 | 191 | 127 | 3 | 2 | 190 | 5 | 194 | 3.67e-35 | 124 |
| MS.gene66728.t1 | MTR_7g058640 | 30.159 | 189 | 128 | 4 | 2 | 188 | 5 | 191 | 4.56e-28 | 105 |
| MS.gene66728.t1 | MTR_1g047710 | 34.677 | 124 | 79 | 2 | 62 | 183 | 12 | 135 | 4.40e-24 | 93.6 |
| MS.gene66728.t1 | MTR_4g022470 | 34.579 | 107 | 68 | 2 | 62 | 166 | 10 | 116 | 2.25e-17 | 75.5 |
| MS.gene66728.t1 | MTR_7g058640 | 31.034 | 116 | 78 | 2 | 77 | 190 | 1 | 116 | 5.94e-16 | 72.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66728.t1 | AT5G22360 | 87.330 | 221 | 27 | 1 | 1 | 220 | 1 | 221 | 7.74e-145 | 403 |
| MS.gene66728.t1 | AT5G11150 | 54.338 | 219 | 99 | 1 | 1 | 218 | 1 | 219 | 4.00e-93 | 272 |
| MS.gene66728.t1 | AT5G11150 | 54.338 | 219 | 99 | 1 | 1 | 218 | 1 | 219 | 1.20e-92 | 271 |
| MS.gene66728.t1 | AT4G32150 | 55.046 | 218 | 98 | 0 | 1 | 218 | 1 | 218 | 6.46e-91 | 266 |
| MS.gene66728.t1 | AT2G25340 | 54.128 | 218 | 100 | 0 | 1 | 218 | 1 | 218 | 1.29e-89 | 263 |
| MS.gene66728.t1 | AT3G54300 | 32.489 | 237 | 138 | 4 | 2 | 217 | 5 | 240 | 3.13e-46 | 153 |
| MS.gene66728.t1 | AT3G54300 | 32.489 | 237 | 138 | 4 | 2 | 217 | 5 | 240 | 3.13e-46 | 153 |
| MS.gene66728.t1 | AT3G54300 | 32.489 | 237 | 138 | 4 | 2 | 217 | 5 | 240 | 3.13e-46 | 153 |
| MS.gene66728.t1 | AT1G04760 | 36.649 | 191 | 118 | 3 | 2 | 190 | 5 | 194 | 4.09e-45 | 150 |
| MS.gene66728.t1 | AT1G04760 | 36.649 | 191 | 118 | 3 | 2 | 190 | 5 | 194 | 4.09e-45 | 150 |
| MS.gene66728.t1 | AT1G04750 | 37.696 | 191 | 116 | 3 | 2 | 190 | 5 | 194 | 4.34e-45 | 150 |
| MS.gene66728.t1 | AT2G33120 | 35.814 | 215 | 135 | 3 | 2 | 214 | 5 | 218 | 5.52e-45 | 149 |
| MS.gene66728.t1 | AT2G32670 | 36.321 | 212 | 132 | 3 | 3 | 212 | 71 | 281 | 3.68e-44 | 149 |
| MS.gene66728.t1 | AT2G33120 | 34.081 | 223 | 136 | 4 | 2 | 214 | 5 | 226 | 9.25e-42 | 141 |
| MS.gene66728.t1 | AT4G15780 | 32.000 | 175 | 117 | 2 | 2 | 174 | 5 | 179 | 1.64e-34 | 121 |
| MS.gene66728.t1 | AT2G33110 | 31.163 | 215 | 141 | 5 | 2 | 214 | 5 | 214 | 1.61e-32 | 117 |
| MS.gene66728.t1 | AT2G33110 | 34.591 | 159 | 101 | 3 | 2 | 158 | 5 | 162 | 2.09e-28 | 106 |
| MS.gene66728.t1 | AT1G04750 | 36.207 | 116 | 72 | 2 | 77 | 190 | 1 | 116 | 1.21e-21 | 87.0 |
| MS.gene66728.t1 | AT1G04750 | 36.207 | 116 | 72 | 2 | 77 | 190 | 1 | 116 | 1.21e-21 | 87.0 |
| MS.gene66728.t1 | AT1G04750 | 36.207 | 116 | 72 | 2 | 77 | 190 | 1 | 116 | 1.21e-21 | 87.0 |
| MS.gene66728.t1 | AT2G33120 | 39.759 | 83 | 50 | 0 | 130 | 212 | 52 | 134 | 4.76e-15 | 69.7 |
Find 50 sgRNAs with CRISPR-Local
Find 272 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCATAAGCCGGTGCATAAT+TGG | 0.238690 | 4.3:-47388034 | None:intergenic |
| AGTTCTTCATAAACCTCATT+TGG | 0.304983 | 4.3:-47387999 | None:intergenic |
| AGCGCCTTCGAAGAGCTCTT+TGG | 0.310654 | 4.3:+47389080 | MS.gene66728:CDS |
| CATTCAGATACGCACTATAA+TGG | 0.367054 | 4.3:+47388952 | MS.gene66728:intron |
| GGATAATATTGAGAAAATAT+TGG | 0.390916 | 4.3:+47388976 | MS.gene66728:CDS |
| GAGAATCCCTTTCTCATACT+TGG | 0.399339 | 4.3:+47387969 | MS.gene66728:CDS |
| TGGCCTTACCTTCCTCTGTA+TGG | 0.442208 | 4.3:+47384920 | MS.gene66728:CDS |
| ACGATTGAGGGCATCAACAC+TGG | 0.464911 | 4.3:-47388115 | None:intergenic |
| TTAATCGCTGCTTGCTGTGG+TGG | 0.509810 | 4.3:+47389323 | MS.gene66728:CDS |
| GATGGCGATTCTCTACGCTT+TGG | 0.510771 | 4.3:+47384743 | None:intergenic |
| GGCGCCTGTGTTGCCCGTGA+CGG | 0.519027 | 4.3:-47384802 | None:intergenic |
| TTCACCCCTCACACGATTGA+GGG | 0.519416 | 4.3:-47388127 | None:intergenic |
| GAGTGACAATTAAGATCTGC+AGG | 0.523051 | 4.3:-47389360 | None:intergenic |
| CGAGAAGCTTCCAACCGAAT+CGG | 0.523485 | 4.3:+47384842 | MS.gene66728:CDS |
| ATATCTTCCAAGTATGAGAA+AGG | 0.529612 | 4.3:-47387976 | None:intergenic |
| CTTCACCCCTCACACGATTG+AGG | 0.532308 | 4.3:-47388128 | None:intergenic |
| GCAAAGTCTCGAATCCGATT+CGG | 0.534256 | 4.3:-47384856 | None:intergenic |
| CTCGAGTAAGCGACGAGCGA+CGG | 0.539512 | 4.3:-47384823 | None:intergenic |
| TGTATGGCTAACGATACCTT+TGG | 0.540329 | 4.3:+47384936 | MS.gene66728:CDS |
| GCAGAATTCAGCGCCGTCAC+GGG | 0.541403 | 4.3:+47384789 | MS.gene66728:CDS |
| TTTCATATTCTCCGATCCGA+TGG | 0.547527 | 4.3:+47384900 | MS.gene66728:CDS |
| AGCAGAATTCAGCGCCGTCA+CGG | 0.547906 | 4.3:+47384788 | MS.gene66728:CDS |
| AATCGTGTGAGGGGTGAAGT+TGG | 0.553527 | 4.3:+47388132 | MS.gene66728:CDS |
| AAATATTGGAGAGAGGTGAC+CGG | 0.553580 | 4.3:+47388990 | MS.gene66728:CDS |
| CAGAGTTGCCAATTATGCAC+CGG | 0.562492 | 4.3:+47388026 | MS.gene66728:CDS |
| TCATCATTCATTGCATAAGC+CGG | 0.569093 | 4.3:-47388045 | None:intergenic |
| ATCGTTAGCCATACAGAGGA+AGG | 0.570414 | 4.3:-47384928 | None:intergenic |
| CGATTGAGGGCATCAACACT+GGG | 0.572459 | 4.3:-47388114 | None:intergenic |
| TATCTTCCAAGTATGAGAAA+GGG | 0.572737 | 4.3:-47387975 | None:intergenic |
| TCATCCAAAGAGCTCTTCGA+AGG | 0.573274 | 4.3:-47389084 | None:intergenic |
| AGCGCCGTCACGGGCAACAC+AGG | 0.576183 | 4.3:+47384798 | MS.gene66728:CDS |
| TAGCCATACAGAGGAAGGTA+AGG | 0.576404 | 4.3:-47384923 | None:intergenic |
| ATTGAGAAAATATTGGAGAG+AGG | 0.585205 | 4.3:+47388983 | MS.gene66728:CDS |
| ACTTGGAAGATATCCAAATG+AGG | 0.594614 | 4.3:+47387986 | MS.gene66728:CDS |
| TATCAACTAGAAGTTCAATC+CGG | 0.596064 | 4.3:-47389009 | None:intergenic |
| CGCTTTGGTAGCAAGAGGCA+CGG | 0.596487 | 4.3:+47384758 | MS.gene66728:CDS |
| AACAAACTACTCACTTCCAA+AGG | 0.603566 | 4.3:-47384952 | None:intergenic |
| TGATGCCCTCAATCGTGTGA+GGG | 0.603648 | 4.3:+47388122 | MS.gene66728:CDS |
| GGAAGGTAAGGCCATCGGAT+CGG | 0.607636 | 4.3:-47384911 | None:intergenic |
| GACAATTAAGATCTGCAGGA+CGG | 0.609210 | 4.3:-47389356 | None:intergenic |
| CTCTACGCTTTGGTAGCAAG+AGG | 0.612445 | 4.3:+47384753 | MS.gene66728:CDS |
| ACAGAGGAAGGTAAGGCCAT+CGG | 0.613254 | 4.3:-47384916 | None:intergenic |
| AGTCTCGAATCCGATTCGGT+TGG | 0.614059 | 4.3:-47384852 | None:intergenic |
| TTGATGCCCTCAATCGTGTG+AGG | 0.617274 | 4.3:+47388121 | MS.gene66728:CDS |
| TCAGATACGCACTATAATGG+TGG | 0.623080 | 4.3:+47388955 | MS.gene66728:intron |
| TGTGAGGGGTGAAGTTGGCG+AGG | 0.651695 | 4.3:+47388137 | MS.gene66728:CDS |
| GATGCCCTCAATCGTGTGAG+GGG | 0.678720 | 4.3:+47388123 | MS.gene66728:CDS |
| AGGTATCGTTAGCCATACAG+AGG | 0.710910 | 4.3:-47384932 | None:intergenic |
| AAAGCGTAGAGAATCGCCAT+CGG | 0.713765 | 4.3:-47384741 | None:intergenic |
| TTTGGTAGCAAGAGGCACGG+TGG | 0.741152 | 4.3:+47384761 | MS.gene66728:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATGATTTAAACTAATTTTTT+TGG | + | chr4.3:47386940-47386959 | MS.gene66728:intron | 10.0% |
| !!! | TGATTTAAACTAATTTTTTT+GGG | + | chr4.3:47386941-47386960 | MS.gene66728:intron | 10.0% |
| !!! | TTTTAAAATAAGAATATATG+AGG | + | chr4.3:47387365-47387384 | MS.gene66728:intron | 10.0% |
| !! | AAAGAGAATATCTTATTAAA+TGG | - | chr4.3:47386366-47386385 | None:intergenic | 15.0% |
| !! | AAGAAAATATAAACAAAAAC+AGG | - | chr4.3:47387141-47387160 | None:intergenic | 15.0% |
| !! | AATCATCAAAAATAAATAGA+TGG | - | chr4.3:47386405-47386424 | None:intergenic | 15.0% |
| !! | AGTAATATTATGCTTATATT+TGG | + | chr4.3:47387715-47387734 | MS.gene66728:intron | 15.0% |
| !! | ATAATATATATTTGGAAGTA+TGG | + | chr4.3:47389147-47389166 | MS.gene66728:intron | 15.0% |
| !! | TCCAAATATATATTATACTA+AGG | - | chr4.3:47389143-47389162 | None:intergenic | 15.0% |
| !! | TCCTTAGTATAATATATATT+TGG | + | chr4.3:47389139-47389158 | MS.gene66728:intron | 15.0% |
| !! | TTATAAAAAGTTACCATTTA+AGG | + | chr4.3:47388319-47388338 | MS.gene66728:intron | 15.0% |
| !!! | AAAATAATCAAATGATTTTC+AGG | - | chr4.3:47388789-47388808 | None:intergenic | 15.0% |
| !!! | AATAATTTTATAGTAGTTTC+AGG | - | chr4.3:47387277-47387296 | None:intergenic | 15.0% |
| !!! | ATTTATTTTTGATGATTATG+AGG | + | chr4.3:47386408-47386427 | MS.gene66728:intron | 15.0% |
| !!! | GATTGATTTTTGTATATAAT+TGG | + | chr4.3:47388705-47388724 | MS.gene66728:intron | 15.0% |
| !! | AAGAAATTCAAAATTCGAAT+TGG | - | chr4.3:47385017-47385036 | None:intergenic | 20.0% |
| !! | ATATTATAGACCAAATACAT+TGG | - | chr4.3:47386528-47386547 | None:intergenic | 20.0% |
| !! | GGATAATATTGAGAAAATAT+TGG | + | chr4.3:47388976-47388995 | MS.gene66728:CDS | 20.0% |
| !! | TAAAACAAGTAGAAAATCAT+CGG | + | chr4.3:47387438-47387457 | MS.gene66728:intron | 20.0% |
| !! | TAACGTTAAAACTAATGTAT+AGG | + | chr4.3:47387803-47387822 | MS.gene66728:intron | 20.0% |
| !! | TAGATATTCTCATATAGAAT+TGG | - | chr4.3:47385619-47385638 | None:intergenic | 20.0% |
| !! | TATTATAGACCAAATACATT+GGG | - | chr4.3:47386527-47386546 | None:intergenic | 20.0% |
| !!! | AAAGTTCTTTTGATTTATTC+TGG | + | chr4.3:47389190-47389209 | MS.gene66728:intron | 20.0% |
| !!! | GAATAAATCAAAAGAACTTT+TGG | - | chr4.3:47389190-47389209 | None:intergenic | 20.0% |
| !!! | TATTGCTTTTCACAAAAAAA+TGG | - | chr4.3:47387785-47387804 | None:intergenic | 20.0% |
| !!! | TATTGTTATTTTCCTTTCTA+GGG | + | chr4.3:47387401-47387420 | MS.gene66728:intron | 20.0% |
| !!! | TTATCACATGTGTTTTTTTA+CGG | - | chr4.3:47388609-47388628 | None:intergenic | 20.0% |
| !!! | TTATTGTTATTTTCCTTTCT+AGG | + | chr4.3:47387400-47387419 | MS.gene66728:intron | 20.0% |
| !!! | TTTTTGCTTATAAATGTAAC+CGG | + | chr4.3:47386589-47386608 | MS.gene66728:intron | 20.0% |
| ! | AATATTATGCACTTAATAGG+AGG | - | chr4.3:47387557-47387576 | None:intergenic | 25.0% |
| ! | ACGTTGTGCTAAATAATAAA+AGG | - | chr4.3:47388378-47388397 | None:intergenic | 25.0% |
| ! | CATTGAGTACTTAATGTATT+TGG | - | chr4.3:47386554-47386573 | None:intergenic | 25.0% |
| ! | CGTTGTGCTAAATAATAAAA+GGG | - | chr4.3:47388377-47388396 | None:intergenic | 25.0% |
| ! | GCAAATATTATGCACTTAAT+AGG | - | chr4.3:47387560-47387579 | None:intergenic | 25.0% |
| ! | GCATATTTATGACATTTATG+AGG | + | chr4.3:47386430-47386449 | MS.gene66728:intron | 25.0% |
| ! | TAACAAGACCCATAATAAAA+TGG | - | chr4.3:47388207-47388226 | None:intergenic | 25.0% |
| ! | TATAGCAGACATCAATATAT+GGG | + | chr4.3:47388575-47388594 | MS.gene66728:intron | 25.0% |
| ! | TATATTGTATCAACAGAGTA+AGG | - | chr4.3:47387109-47387128 | None:intergenic | 25.0% |
| ! | TATGCTTATATTTGGTAGAT+AGG | + | chr4.3:47387723-47387742 | MS.gene66728:intron | 25.0% |
| ! | TGTCAATTGAATGAAATTGA+TGG | - | chr4.3:47385827-47385846 | None:intergenic | 25.0% |
| ! | TTTAGTCAAACAGTAATGTT+TGG | - | chr4.3:47385460-47385479 | None:intergenic | 25.0% |
| !! | AATGAATGATGAGTTTTCAA+GGG | + | chr4.3:47388056-47388075 | MS.gene66728:CDS | 25.0% |
| !! | ACGTTTAGTCAAACAATTTT+GGG | - | chr4.3:47386991-47387010 | None:intergenic | 25.0% |
| !! | AGTATTACTTCTTTGAAGAA+AGG | + | chr4.3:47385164-47385183 | MS.gene66728:intron | 25.0% |
| !! | ATTTATTCTGGAAAGCAAAA+TGG | + | chr4.3:47389202-47389221 | MS.gene66728:intron | 25.0% |
| !! | ATTTTGAATTTCTTGTGAGA+TGG | + | chr4.3:47385023-47385042 | MS.gene66728:intron | 25.0% |
| !! | GTGATGATGAGTTATTATAT+AGG | + | chr4.3:47388683-47388702 | MS.gene66728:intron | 25.0% |
| !! | TCTGAAATTAATAGTAGAAG+AGG | + | chr4.3:47387056-47387075 | MS.gene66728:intron | 25.0% |
| !! | TGTCTATGCTTGTTAAAAAT+AGG | - | chr4.3:47386921-47386940 | None:intergenic | 25.0% |
| !! | TGTGTTGAACAATTAATTTG+AGG | + | chr4.3:47385523-47385542 | MS.gene66728:intron | 25.0% |
| !! | TTTATTCTGGAAAGCAAAAT+GGG | + | chr4.3:47389203-47389222 | MS.gene66728:intron | 25.0% |
| !! | TTTTGAATTTCTTGTGAGAT+GGG | + | chr4.3:47385024-47385043 | MS.gene66728:intron | 25.0% |
| !! | TTTTTGCTTATAAATGTGAC+CGG | - | chr4.3:47386480-47386499 | None:intergenic | 25.0% |
| !!! | CAAATGATTTTCAGGAAAAA+AGG | - | chr4.3:47388781-47388800 | None:intergenic | 25.0% |
| !!! | TAAGCAAAAAACCACTTTTT+AGG | + | chr4.3:47386490-47386509 | MS.gene66728:intron | 25.0% |
| !!! | TAAGCAAAAAACCACTTTTT+AGG | - | chr4.3:47386509-47386490 | None:intergenic | 25.0% |
| !!! | TGATTTTCTACTTGTTTTAC+AGG | - | chr4.3:47387437-47387456 | None:intergenic | 25.0% |
| AAAAGGGAAATGTTAACTAG+TGG | - | chr4.3:47388361-47388380 | None:intergenic | 30.0% | |
| AAAGGGAAATGTTAACTAGT+GGG | - | chr4.3:47388360-47388379 | None:intergenic | 30.0% | |
| AACTTCAGAACACTAATAAC+AGG | - | chr4.3:47385281-47385300 | None:intergenic | 30.0% | |
| AAGACCCATAATAAAATGGT+GGG | - | chr4.3:47388203-47388222 | None:intergenic | 30.0% | |
| ACAGTCAATAACTATAGGAA+CGG | + | chr4.3:47385940-47385959 | MS.gene66728:intron | 30.0% | |
| AGTGATGCTTTCAGTAAAAA+TGG | + | chr4.3:47388658-47388677 | MS.gene66728:intron | 30.0% | |
| AGTTCTTCATAAACCTCATT+TGG | - | chr4.3:47388002-47388021 | None:intergenic | 30.0% | |
| ATATCTTCCAAGTATGAGAA+AGG | - | chr4.3:47387979-47387998 | None:intergenic | 30.0% | |
| ATATTGAACTAGCAAAAGCA+AGG | - | chr4.3:47388469-47388488 | None:intergenic | 30.0% | |
| ATTCATAGTTACACTATTGG+AGG | - | chr4.3:47385666-47385685 | None:intergenic | 30.0% | |
| ATTGAGAAAATATTGGAGAG+AGG | + | chr4.3:47388983-47389002 | MS.gene66728:CDS | 30.0% | |
| CAAGTGAGAGATAATATGAT+AGG | + | chr4.3:47388432-47388451 | MS.gene66728:intron | 30.0% | |
| CTATAGCAGACATCAATATA+TGG | + | chr4.3:47388574-47388593 | MS.gene66728:intron | 30.0% | |
| GAAAGCTTAAAATAAGCTGA+AGG | - | chr4.3:47385990-47386009 | None:intergenic | 30.0% | |
| TACTCAATGAACCTAAAAAG+TGG | + | chr4.3:47386565-47386584 | MS.gene66728:intron | 30.0% | |
| TAGGGCATAAACATATACAT+CGG | - | chr4.3:47388639-47388658 | None:intergenic | 30.0% | |
| TATCAACTAGAAGTTCAATC+CGG | - | chr4.3:47389012-47389031 | None:intergenic | 30.0% | |
| TATCTTCCAAGTATGAGAAA+GGG | - | chr4.3:47387978-47387997 | None:intergenic | 30.0% | |
| TATTCTCTACACTTTCAACA+AGG | + | chr4.3:47387636-47387655 | MS.gene66728:intron | 30.0% | |
| TATTGAACTAGCAAAAGCAA+GGG | - | chr4.3:47388468-47388487 | None:intergenic | 30.0% | |
| TCAAAATTCGAATTGGATCA+TGG | - | chr4.3:47385010-47385029 | None:intergenic | 30.0% | |
| TCATTCAATTGACATTGTTG+TGG | + | chr4.3:47385833-47385852 | MS.gene66728:intron | 30.0% | |
| TCCAATAGTGTAACTATGAA+TGG | + | chr4.3:47385665-47385684 | MS.gene66728:intron | 30.0% | |
| TCCCTGGATAAATAAAACAT+GGG | - | chr4.3:47387951-47387970 | None:intergenic | 30.0% | |
| TGTGAACAGTCAATAACTAT+AGG | + | chr4.3:47385935-47385954 | MS.gene66728:intron | 30.0% | |
| TGTTGAATGAACCTAAAAAG+TGG | - | chr4.3:47386504-47386523 | None:intergenic | 30.0% | |
| ! | ATTTTAAGCTTTCACGTTTC+AGG | + | chr4.3:47385997-47386016 | MS.gene66728:intron | 30.0% |
| ! | CAATGAATGATGAGTTTTCA+AGG | + | chr4.3:47388055-47388074 | MS.gene66728:CDS | 30.0% |
| ! | GAAGTATGGATTTTTGATCT+GGG | + | chr4.3:47389161-47389180 | MS.gene66728:intron | 30.0% |
| ! | GACGTTTAGTCAAACAATTT+TGG | - | chr4.3:47386992-47387011 | None:intergenic | 30.0% |
| ! | TGAGATTTTATCTTGGGTAT+TGG | + | chr4.3:47386772-47386791 | MS.gene66728:intron | 30.0% |
| ! | TTTACGTGTTTGATTGCTTT+TGG | + | chr4.3:47385248-47385267 | MS.gene66728:intron | 30.0% |
| !!! | ACGTAGCTTCTTTATTTTCA+TGG | + | chr4.3:47385391-47385410 | MS.gene66728:intron | 30.0% |
| !!! | ATGTATTTTGGTCTTTGACA+GGG | + | chr4.3:47389262-47389281 | MS.gene66728:intron | 30.0% |
| !!! | GATAGTGTGTTTTGATAATC+TGG | - | chr4.3:47386869-47386888 | None:intergenic | 30.0% |
| !!! | GATCTCTGAGATTTTATCTT+GGG | + | chr4.3:47386766-47386785 | MS.gene66728:intron | 30.0% |
| !!! | TATGTATTTTGGTCTTTGAC+AGG | + | chr4.3:47389261-47389280 | MS.gene66728:intron | 30.0% |
| !!! | TCCCATGTTTTATTTATCCA+GGG | + | chr4.3:47387947-47387966 | MS.gene66728:intron | 30.0% |
| !!! | TGATCTCTGAGATTTTATCT+TGG | + | chr4.3:47386765-47386784 | MS.gene66728:intron | 30.0% |
| !!! | TGTGTTTTGATAATCTGGTA+AGG | - | chr4.3:47386864-47386883 | None:intergenic | 30.0% |
| !!! | TTTTACTGAAAGCATCACTA+GGG | - | chr4.3:47388657-47388676 | None:intergenic | 30.0% |
| !!! | TTTTTACTGAAAGCATCACT+AGG | - | chr4.3:47388658-47388677 | None:intergenic | 30.0% |
| AACAAACTACTCACTTCCAA+AGG | - | chr4.3:47384955-47384974 | None:intergenic | 35.0% | |
| AAGGGAAATGTTAACTAGTG+GGG | - | chr4.3:47388359-47388378 | None:intergenic | 35.0% | |
| AAGTGTGGGTAAAGAATCTA+TGG | - | chr4.3:47387174-47387193 | None:intergenic | 35.0% | |
| AATGATACCTCAAATGGAAG+GGG | + | chr4.3:47387518-47387537 | MS.gene66728:intron | 35.0% | |
| AATGTCATCAACGATGTGAT+AGG | - | chr4.3:47388916-47388935 | None:intergenic | 35.0% | |
| ACTTGGAAGATATCCAAATG+AGG | + | chr4.3:47387986-47388005 | MS.gene66728:CDS | 35.0% | |
| AGATGTCAAACCCAAACAAT+CGG | - | chr4.3:47385780-47385799 | None:intergenic | 35.0% | |
| CAAGACCCATAATAAAATGG+TGG | - | chr4.3:47388204-47388223 | None:intergenic | 35.0% | |
| CAATGATACCTCAAATGGAA+GGG | + | chr4.3:47387517-47387536 | MS.gene66728:intron | 35.0% | |
| CATTCAACACCCAATGTATT+TGG | + | chr4.3:47386515-47386534 | MS.gene66728:intron | 35.0% | |
| CATTCAGATACGCACTATAA+TGG | + | chr4.3:47388952-47388971 | MS.gene66728:intron | 35.0% | |
| CTCCCTGGATAAATAAAACA+TGG | - | chr4.3:47387952-47387971 | None:intergenic | 35.0% | |
| CTTAAAATAAGCTGAAGGCT+CGG | - | chr4.3:47385985-47386004 | None:intergenic | 35.0% | |
| GACCAAAATACATACAGTCA+AGG | - | chr4.3:47389255-47389274 | None:intergenic | 35.0% | |
| GACTGTTTCCTTATGGAAAA+GGG | - | chr4.3:47385903-47385922 | None:intergenic | 35.0% | |
| GCACATGAAAACAGTAACAA+AGG | - | chr4.3:47387919-47387938 | None:intergenic | 35.0% | |
| GCCATTCATAGTTACACTAT+TGG | - | chr4.3:47385669-47385688 | None:intergenic | 35.0% | |
| GTGACTCATAGTACATACTT+AGG | - | chr4.3:47388527-47388546 | None:intergenic | 35.0% | |
| TCATCATTCATTGCATAAGC+CGG | - | chr4.3:47388048-47388067 | None:intergenic | 35.0% | |
| TGACTGTTTCCTTATGGAAA+AGG | - | chr4.3:47385904-47385923 | None:intergenic | 35.0% | |
| TGCTTATAAATGTAACCGGA+GGG | + | chr4.3:47386593-47386612 | MS.gene66728:intron | 35.0% | |
| TTGATGTCTGCTATAGAAAC+TGG | - | chr4.3:47388570-47388589 | None:intergenic | 35.0% | |
| TTGCTTATAAATGTAACCGG+AGG | + | chr4.3:47386592-47386611 | MS.gene66728:intron | 35.0% | |
| TTGTTCAACACACGTTTACA+TGG | - | chr4.3:47385515-47385534 | None:intergenic | 35.0% | |
| ! | ACAACACATTTCAAGTCAAG+AGG | - | chr4.3:47388755-47388774 | None:intergenic | 35.0% |
| ! | AGACATCAATATATGGGTTG+TGG | + | chr4.3:47388581-47388600 | MS.gene66728:intron | 35.0% |
| ! | CAACACATTTCAAGTCAAGA+GGG | - | chr4.3:47388754-47388773 | None:intergenic | 35.0% |
| ! | CAGTTGTCAAGTTTTCTTGA+GGG | + | chr4.3:47385738-47385757 | MS.gene66728:intron | 35.0% |
| ! | CATTTGAGGTATCATTGGTT+GGG | - | chr4.3:47387514-47387533 | None:intergenic | 35.0% |
| ! | CTTCTTTGAAGAAAGGTGAT+AGG | + | chr4.3:47385171-47385190 | MS.gene66728:intron | 35.0% |
| ! | GACATCAATATATGGGTTGT+GGG | + | chr4.3:47388582-47388601 | MS.gene66728:intron | 35.0% |
| ! | TAATTGACTGATTCCATGAC+TGG | - | chr4.3:47387673-47387692 | None:intergenic | 35.0% |
| ! | TCAGTTGTCAAGTTTTCTTG+AGG | + | chr4.3:47385737-47385756 | MS.gene66728:intron | 35.0% |
| ! | TGTGCCCACCATTTTATTAT+GGG | + | chr4.3:47388196-47388215 | MS.gene66728:intron | 35.0% |
| ! | TTGAAAGACCCTTTTCCATA+AGG | + | chr4.3:47385892-47385911 | MS.gene66728:intron | 35.0% |
| ! | TTTTCCATAAGGAAACAGTC+AGG | + | chr4.3:47385903-47385922 | MS.gene66728:intron | 35.0% |
| !! | GGAAGTATGGATTTTTGATC+TGG | + | chr4.3:47389160-47389179 | MS.gene66728:intron | 35.0% |
| !! | TCTTGGGTATTGGTCAAATT+TGG | + | chr4.3:47386782-47386801 | MS.gene66728:intron | 35.0% |
| !!! | GTCCCATGTTTTATTTATCC+AGG | + | chr4.3:47387946-47387965 | MS.gene66728:intron | 35.0% |
| AAACATGATCCAAACTCCTG+TGG | + | chr4.3:47386832-47386851 | MS.gene66728:intron | 40.0% | |
| AAATACATACAGTCAAGGCG+AGG | - | chr4.3:47389250-47389269 | None:intergenic | 40.0% | |
| AAATATTGGAGAGAGGTGAC+CGG | + | chr4.3:47388990-47389009 | MS.gene66728:CDS | 40.0% | |
| AACGAGTGCATTAGACATCA+TGG | - | chr4.3:47385868-47385887 | None:intergenic | 40.0% | |
| ACTACTAGCACACAGATTCT+TGG | - | chr4.3:47387698-47387717 | None:intergenic | 40.0% | |
| AGGCGAGGATAGAAGAAAAA+TGG | - | chr4.3:47389235-47389254 | None:intergenic | 40.0% | |
| AGGGAAATGTTAACTAGTGG+GGG | - | chr4.3:47388358-47388377 | None:intergenic | 40.0% | |
| ATGATACCTCAAATGGAAGG+GGG | + | chr4.3:47387519-47387538 | MS.gene66728:intron | 40.0% | |
| CCAACCAATGATACCTCAAA+TGG | + | chr4.3:47387512-47387531 | MS.gene66728:intron | 40.0% | |
| CCAATGATACCTCAAATGGA+AGG | + | chr4.3:47387516-47387535 | MS.gene66728:intron | 40.0% | |
| CTGTGTATTCTGCATTCTCA+TGG | - | chr4.3:47386735-47386754 | None:intergenic | 40.0% | |
| GACGCGTGTTCAAAATCAAT+AGG | - | chr4.3:47385354-47385373 | None:intergenic | 40.0% | |
| GAGAATCCCTTTCTCATACT+TGG | + | chr4.3:47387969-47387988 | MS.gene66728:CDS | 40.0% | |
| TAATCTTGTCGAAGCTGTTG+TGG | + | chr4.3:47387753-47387772 | MS.gene66728:intron | 40.0% | |
| TCAGATACGCACTATAATGG+TGG | + | chr4.3:47388955-47388974 | MS.gene66728:intron | 40.0% | |
| TCTACACTTTCAACAAGGTC+AGG | + | chr4.3:47387641-47387660 | MS.gene66728:intron | 40.0% | |
| TCTGCATTCTCATGGTTTCA+GGG | - | chr4.3:47386727-47386746 | None:intergenic | 40.0% | |
| TGATCAGACCAGCAGTTTAA+AGG | + | chr4.3:47386697-47386716 | MS.gene66728:intron | 40.0% | |
| TGCTTATAAATGTGACCGGA+GGG | - | chr4.3:47386476-47386495 | None:intergenic | 40.0% | |
| TGTATGGCTAACGATACCTT+TGG | + | chr4.3:47384936-47384955 | MS.gene66728:CDS | 40.0% | |
| TTCTGCATTCTCATGGTTTC+AGG | - | chr4.3:47386728-47386747 | None:intergenic | 40.0% | |
| TTGCTTATAAATGTGACCGG+AGG | - | chr4.3:47386477-47386496 | None:intergenic | 40.0% | |
| TTTCATATTCTCCGATCCGA+TGG | + | chr4.3:47384900-47384919 | MS.gene66728:CDS | 40.0% | |
| ! | AAGGGTTTTGCATCAGCAAA+TGG | + | chr4.3:47388074-47388093 | MS.gene66728:CDS | 40.0% |
| ! | ACTGCTGGTCTGATCAATAT+TGG | - | chr4.3:47386693-47386712 | None:intergenic | 40.0% |
| ! | AGTGGTCATGATTTGAAGTG+TGG | - | chr4.3:47387189-47387208 | None:intergenic | 40.0% |
| ! | ATGGTTTGAAACACGTGTCA+TGG | - | chr4.3:47386347-47386366 | None:intergenic | 40.0% |
| ! | CACTGGTTAAGGACCTTAAA+TGG | - | chr4.3:47388335-47388354 | None:intergenic | 40.0% |
| ! | CCATTTGAGGTATCATTGGT+TGG | - | chr4.3:47387515-47387534 | None:intergenic | 40.0% |
| ! | CCTTCCATTTGAGGTATCAT+TGG | - | chr4.3:47387519-47387538 | None:intergenic | 40.0% |
| ! | CGCCTTGACTGTATGTATTT+TGG | + | chr4.3:47389250-47389269 | MS.gene66728:intron | 40.0% |
| ! | GTGGTCATGATTTGAAGTGT+GGG | - | chr4.3:47387188-47387207 | None:intergenic | 40.0% |
| ! | GTGTGCCCACCATTTTATTA+TGG | + | chr4.3:47388195-47388214 | MS.gene66728:intron | 40.0% |
| ! | GTTTTCCACTGCTACTACAA+CGG | + | chr4.3:47387211-47387230 | MS.gene66728:intron | 40.0% |
| ! | TACCTTCTGGGAACATCATT+TGG | + | chr4.3:47386280-47386299 | MS.gene66728:intron | 40.0% |
| !! | ATGAGGAAGTATCTGATTGG+TGG | - | chr4.3:47386324-47386343 | None:intergenic | 40.0% |
| !! | ATGTTTGGGCAGTATTGATC+AGG | - | chr4.3:47386642-47386661 | None:intergenic | 40.0% |
| !! | GGACCTATTGGCTTATGTTT+GGG | - | chr4.3:47386656-47386675 | None:intergenic | 40.0% |
| !! | TGGATGAGGAAGTATCTGAT+TGG | - | chr4.3:47386327-47386346 | None:intergenic | 40.0% |
| !! | TGTTTGGGCAGTATTGATCA+GGG | - | chr4.3:47386641-47386660 | None:intergenic | 40.0% |
| !! | TTTTTAATCGCTGCTTGCTG+TGG | + | chr4.3:47389320-47389339 | MS.gene66728:CDS | 40.0% |
| !!! | AATTTTTTTGGGTGACCAGC+TGG | + | chr4.3:47386952-47386971 | MS.gene66728:intron | 40.0% |
| !!! | TCTACTTGTTTTACAGGTCC+AGG | - | chr4.3:47387431-47387450 | None:intergenic | 40.0% |
| AATATTGGAGACAAAGCGCG+AGG | - | chr4.3:47386678-47386697 | None:intergenic | 45.0% | |
| ACATTAAGGCATACTCCCTC+CGG | - | chr4.3:47386611-47386630 | None:intergenic | 45.0% | |
| ACGTGACATGCATACCTTCT+GGG | + | chr4.3:47386061-47386080 | MS.gene66728:intron | 45.0% | |
| AGGCAAAAACCACAGGAGTT+TGG | - | chr4.3:47386844-47386863 | None:intergenic | 45.0% | |
| AGGTATGCATGTCACGTGAT+TGG | - | chr4.3:47386058-47386077 | None:intergenic | 45.0% | |
| AGTAGCAGTGGAAAACACAG+TGG | - | chr4.3:47387207-47387226 | None:intergenic | 45.0% | |
| ATATTGGAGACAAAGCGCGA+GGG | - | chr4.3:47386677-47386696 | None:intergenic | 45.0% | |
| ATCAGGGAAGGCAGACATTA+AGG | - | chr4.3:47386625-47386644 | None:intergenic | 45.0% | |
| ATCGTTAGCCATACAGAGGA+AGG | - | chr4.3:47384931-47384950 | None:intergenic | 45.0% | |
| CAGAGTTGCCAATTATGCAC+CGG | + | chr4.3:47388026-47388045 | MS.gene66728:CDS | 45.0% | |
| CTACAGCTTAATACTCCCTC+CGG | + | chr4.3:47386458-47386477 | MS.gene66728:intron | 45.0% | |
| CTGCCCAAACATAAGCCAAT+AGG | + | chr4.3:47386650-47386669 | MS.gene66728:intron | 45.0% | |
| CTTTCACGTTTCAGGCTTAG+AGG | + | chr4.3:47386005-47386024 | MS.gene66728:intron | 45.0% | |
| GACCAAATGATGTTCCCAGA+AGG | - | chr4.3:47386285-47386304 | None:intergenic | 45.0% | |
| GATGTGTGTGATGCATGCTA+AGG | + | chr4.3:47388880-47388899 | MS.gene66728:intron | 45.0% | |
| GCAAAGTCTCGAATCCGATT+CGG | - | chr4.3:47384859-47384878 | None:intergenic | 45.0% | |
| GGTCAGGTTTATTCCAGTCA+TGG | + | chr4.3:47387657-47387676 | MS.gene66728:intron | 45.0% | |
| TACCGTCCTGCAGATCTTAA+TGG | + | chr4.3:47389354-47389373 | MS.gene66728:CDS | 45.0% | |
| TAGCCATACAGAGGAAGGTA+AGG | - | chr4.3:47384926-47384945 | None:intergenic | 45.0% | |
| TATGAGAAAGGGATTCTCCC+TGG | - | chr4.3:47387967-47387986 | None:intergenic | 45.0% | |
| TCAGACCAGCAGTTTAAAGG+AGG | + | chr4.3:47386700-47386719 | MS.gene66728:intron | 45.0% | |
| TCATCCAAAGAGCTCTTCGA+AGG | - | chr4.3:47389087-47389106 | None:intergenic | 45.0% | |
| TCTGGTAAGGCAAAAACCAC+AGG | - | chr4.3:47386851-47386870 | None:intergenic | 45.0% | |
| TGAAACACGTGTCATGGATG+AGG | - | chr4.3:47386341-47386360 | None:intergenic | 45.0% | |
| TGCATAAGCCGGTGCATAAT+TGG | - | chr4.3:47388037-47388056 | None:intergenic | 45.0% | |
| TGCTCCTGACTGTTTCCTTA+TGG | - | chr4.3:47385910-47385929 | None:intergenic | 45.0% | |
| TTTCTTCCCCCTTCCATTTG+AGG | - | chr4.3:47387528-47387547 | None:intergenic | 45.0% | |
| ! | AGGTATCGTTAGCCATACAG+AGG | - | chr4.3:47384935-47384954 | None:intergenic | 45.0% |
| ! | ATATGCTTAAAGAGTGCGCC+GGG | - | chr4.3:47388239-47388258 | None:intergenic | 45.0% |
| ! | CATATGCTTAAAGAGTGCGC+CGG | - | chr4.3:47388240-47388259 | None:intergenic | 45.0% |
| ! | GTTTTCTTGAGGGCTCTTTC+CGG | + | chr4.3:47385748-47385767 | MS.gene66728:intron | 45.0% |
| ! | TGGTGGGCACACATCAAAAA+GGG | - | chr4.3:47388187-47388206 | None:intergenic | 45.0% |
| !! | ATGGTGGGCACACATCAAAA+AGG | - | chr4.3:47388188-47388207 | None:intergenic | 45.0% |
| !! | GGAAGTATCTGATTGGTGGA+AGG | - | chr4.3:47386320-47386339 | None:intergenic | 45.0% |
| !! | GGGACCTATTGGCTTATGTT+TGG | - | chr4.3:47386657-47386676 | None:intergenic | 45.0% |
| !! | TTTCCTTTCTAGGGTAGTCC+TGG | + | chr4.3:47387410-47387429 | MS.gene66728:intron | 45.0% |
| AATACCGACCGAGACATACG+TGG | + | chr4.3:47386032-47386051 | MS.gene66728:intron | 50.0% | |
| AATCGTGTGAGGGGTGAAGT+TGG | + | chr4.3:47388132-47388151 | MS.gene66728:CDS | 50.0% | |
| ACAGAGGAAGGTAAGGCCAT+CGG | - | chr4.3:47384919-47384938 | None:intergenic | 50.0% | |
| ACTGTTAACAACGCTGGTGG+TGG | - | chr4.3:47387252-47387271 | None:intergenic | 50.0% | |
| AGCAACGACTGTTTCCCAGA+AGG | - | chr4.3:47386078-47386097 | None:intergenic | 50.0% | |
| AGGGTCCTCCTTTAAACTGC+TGG | - | chr4.3:47386708-47386727 | None:intergenic | 50.0% | |
| CACGTGACATGCATACCTTC+TGG | + | chr4.3:47386060-47386079 | MS.gene66728:intron | 50.0% | |
| CAGGACACTGTTAACAACGC+TGG | - | chr4.3:47387258-47387277 | None:intergenic | 50.0% | |
| CGAGAAGCTTCCAACCGAAT+CGG | + | chr4.3:47384842-47384861 | MS.gene66728:CDS | 50.0% | |
| CTGTTAACAACGCTGGTGGT+GGG | - | chr4.3:47387251-47387270 | None:intergenic | 50.0% | |
| GACACTGTTAACAACGCTGG+TGG | - | chr4.3:47387255-47387274 | None:intergenic | 50.0% | |
| TACGTGTCGTAGCTTCAAGC+TGG | - | chr4.3:47385376-47385395 | None:intergenic | 50.0% | |
| TGATGCCCTCAATCGTGTGA+GGG | + | chr4.3:47388122-47388141 | MS.gene66728:CDS | 50.0% | |
| TTCACCCCTCACACGATTGA+GGG | - | chr4.3:47388130-47388149 | None:intergenic | 50.0% | |
| TTGATGCCCTCAATCGTGTG+AGG | + | chr4.3:47388121-47388140 | MS.gene66728:CDS | 50.0% | |
| TTTCATCTTTCTCGCGCTGC+AGG | - | chr4.3:47385426-47385445 | None:intergenic | 50.0% | |
| ! | ATGTTAACTAGTGGGGGCAC+TGG | - | chr4.3:47388352-47388371 | None:intergenic | 50.0% |
| ! | CTCTACGCTTTGGTAGCAAG+AGG | + | chr4.3:47384753-47384772 | MS.gene66728:CDS | 50.0% |
| ! | GTGATTGGCCACGTATGTCT+CGG | - | chr4.3:47386043-47386062 | None:intergenic | 50.0% |
| ! | TATGCTTAAAGAGTGCGCCG+GGG | - | chr4.3:47388238-47388257 | None:intergenic | 50.0% |
| ! | TGGCCTTACCTTCCTCTGTA+TGG | + | chr4.3:47384920-47384939 | MS.gene66728:CDS | 50.0% |
| !! | ACGATTGAGGGCATCAACAC+TGG | - | chr4.3:47388118-47388137 | None:intergenic | 50.0% |
| !! | AGTCTCGAATCCGATTCGGT+TGG | - | chr4.3:47384855-47384874 | None:intergenic | 50.0% |
| !! | CGATTGAGGGCATCAACACT+GGG | - | chr4.3:47388117-47388136 | None:intergenic | 50.0% |
| !! | TGGGCAGTATTGATCAGGGA+AGG | - | chr4.3:47386637-47386656 | None:intergenic | 50.0% |
| !! | TGGTGGAAGGTGTCGTCTAT+GGG | - | chr4.3:47386307-47386326 | None:intergenic | 50.0% |
| !! | TTAATCGCTGCTTGCTGTGG+TGG | + | chr4.3:47389323-47389342 | MS.gene66728:CDS | 50.0% |
| !! | TTGGTGGAAGGTGTCGTCTA+TGG | - | chr4.3:47386308-47386327 | None:intergenic | 50.0% |
| ACAAAGCGCGAGGGACCTAT+TGG | - | chr4.3:47386668-47386687 | None:intergenic | 55.0% | |
| AGCAGAATTCAGCGCCGTCA+CGG | + | chr4.3:47384788-47384807 | MS.gene66728:CDS | 55.0% | |
| AGCGCCTTCGAAGAGCTCTT+TGG | + | chr4.3:47389080-47389099 | MS.gene66728:CDS | 55.0% | |
| CCCAAACAATCGGCCAAAGC+CGG | - | chr4.3:47385770-47385789 | None:intergenic | 55.0% | |
| CTTCACCCCTCACACGATTG+AGG | - | chr4.3:47388131-47388150 | None:intergenic | 55.0% | |
| GATGCCCTCAATCGTGTGAG+GGG | + | chr4.3:47388123-47388142 | MS.gene66728:CDS | 55.0% | |
| GGAAGGTAAGGCCATCGGAT+CGG | - | chr4.3:47384914-47384933 | None:intergenic | 55.0% | |
| GGACAGTCTTCTTCACCAGC+TGG | - | chr4.3:47386970-47386989 | None:intergenic | 55.0% | |
| GGTCCAGGACTACCCTAGAA+AGG | - | chr4.3:47387416-47387435 | None:intergenic | 55.0% | |
| TACTACAACGGCCGACACCA+TGG | + | chr4.3:47387223-47387242 | MS.gene66728:intron | 55.0% | |
| TTGAGGGCTCTTTCCGGCTT+TGG | + | chr4.3:47385754-47385773 | MS.gene66728:intron | 55.0% | |
| TTGGCCACGTATGTCTCGGT+CGG | - | chr4.3:47386039-47386058 | None:intergenic | 55.0% | |
| ! | ATGCTTAAAGAGTGCGCCGG+GGG | - | chr4.3:47388237-47388256 | None:intergenic | 55.0% |
| ! | CCGGCTTTGGCCGATTGTTT+GGG | + | chr4.3:47385767-47385786 | MS.gene66728:intron | 55.0% |
| ! | CGCTTTGGTAGCAAGAGGCA+CGG | + | chr4.3:47384758-47384777 | MS.gene66728:CDS | 55.0% |
| ! | GTCTTGTTAACGAGTGCCCC+CGG | + | chr4.3:47388218-47388237 | MS.gene66728:intron | 55.0% |
| ! | TCCGGCTTTGGCCGATTGTT+TGG | + | chr4.3:47385766-47385785 | MS.gene66728:intron | 55.0% |
| ! | TTTGGTAGCAAGAGGCACGG+TGG | + | chr4.3:47384761-47384780 | MS.gene66728:CDS | 55.0% |
| !! | ACTAGTGGGGGCACTGGTTA+AGG | - | chr4.3:47388346-47388365 | None:intergenic | 55.0% |
| CTCGAGTAAGCGACGAGCGA+CGG | - | chr4.3:47384826-47384845 | None:intergenic | 60.0% | |
| GCAGAATTCAGCGCCGTCAC+GGG | + | chr4.3:47384789-47384808 | MS.gene66728:CDS | 60.0% | |
| GTCGGCCGTTGTAGTAGCAG+TGG | - | chr4.3:47387219-47387238 | None:intergenic | 60.0% | |
| TGTGAGGGGTGAAGTTGGCG+AGG | + | chr4.3:47388137-47388156 | MS.gene66728:CDS | 60.0% | |
| !! | AACGCTGGTGGTGGGAACCA+TGG | - | chr4.3:47387243-47387262 | None:intergenic | 60.0% |
| !! | GGTGGTGGGAACCATGGTGT+CGG | - | chr4.3:47387237-47387256 | None:intergenic | 60.0% |
| AGCGCCGTCACGGGCAACAC+AGG | + | chr4.3:47384798-47384817 | MS.gene66728:CDS | 70.0% | |
| GGCGCCTGTGTTGCCCGTGA+CGG | - | chr4.3:47384805-47384824 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 47384744 | 47389373 | 47384744 | ID=MS.gene66728 |
| chr4.3 | mRNA | 47384744 | 47389373 | 47384744 | ID=MS.gene66728.t1;Parent=MS.gene66728 |
| chr4.3 | exon | 47384744 | 47384960 | 47384744 | ID=MS.gene66728.t1.exon1;Parent=MS.gene66728.t1 |
| chr4.3 | CDS | 47384744 | 47384960 | 47384744 | ID=cds.MS.gene66728.t1;Parent=MS.gene66728.t1 |
| chr4.3 | exon | 47387968 | 47388158 | 47387968 | ID=MS.gene66728.t1.exon2;Parent=MS.gene66728.t1 |
| chr4.3 | CDS | 47387968 | 47388158 | 47387968 | ID=cds.MS.gene66728.t1;Parent=MS.gene66728.t1 |
| chr4.3 | exon | 47388959 | 47389122 | 47388959 | ID=MS.gene66728.t1.exon3;Parent=MS.gene66728.t1 |
| chr4.3 | CDS | 47388959 | 47389122 | 47388959 | ID=cds.MS.gene66728.t1;Parent=MS.gene66728.t1 |
| chr4.3 | exon | 47389283 | 47389373 | 47389283 | ID=MS.gene66728.t1.exon4;Parent=MS.gene66728.t1 |
| chr4.3 | CDS | 47389283 | 47389373 | 47389283 | ID=cds.MS.gene66728.t1;Parent=MS.gene66728.t1 |
| Gene Sequence |
| Protein sequence |
