Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029336.t1 | XP_013470256.1 | 99.6 | 238 | 1 | 0 | 1 | 238 | 1 | 238 | 1.50E-128 | 468.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029336.t1 | Q9M376 | 86.1 | 238 | 33 | 0 | 1 | 238 | 1 | 238 | 2.2e-115 | 416.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029336.t1 | G7ZYS4 | 99.6 | 238 | 1 | 0 | 1 | 238 | 1 | 238 | 1.1e-128 | 468.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene00315 | MS.gene029336 | PPI |
| MS.gene55353 | MS.gene029336 | PPI |
| MS.gene85927 | MS.gene029336 | PPI |
| MS.gene66728 | MS.gene029336 | PPI |
| MS.gene78212 | MS.gene029336 | PPI |
| MS.gene073364 | MS.gene029336 | PPI |
| MS.gene77217 | MS.gene029336 | PPI |
| MS.gene016966 | MS.gene029336 | PPI |
| MS.gene78610 | MS.gene029336 | PPI |
| MS.gene88213 | MS.gene029336 | PPI |
| MS.gene53154 | MS.gene029336 | PPI |
| MS.gene70862 | MS.gene029336 | PPI |
| MS.gene004575 | MS.gene029336 | PPI |
| MS.gene65117 | MS.gene029336 | PPI |
| MS.gene47655 | MS.gene029336 | PPI |
| MS.gene66057 | MS.gene029336 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029336.t1 | MTR_1g111890 | 99.580 | 238 | 1 | 0 | 1 | 238 | 1 | 238 | 1.05e-179 | 492 |
| MS.gene029336.t1 | MTR_1g047720 | 54.202 | 238 | 90 | 2 | 1 | 238 | 1 | 219 | 9.70e-98 | 284 |
| MS.gene029336.t1 | MTR_4g022570 | 56.303 | 238 | 85 | 1 | 1 | 238 | 1 | 219 | 1.19e-95 | 279 |
| MS.gene029336.t1 | MTR_7g058900 | 55.649 | 239 | 85 | 2 | 1 | 238 | 1 | 219 | 3.99e-92 | 270 |
| MS.gene029336.t1 | MTR_4g083490 | 57.277 | 213 | 72 | 2 | 2 | 214 | 4 | 197 | 6.31e-92 | 270 |
| MS.gene029336.t1 | MTR_2g436870 | 51.261 | 238 | 97 | 1 | 1 | 238 | 1 | 219 | 6.00e-91 | 267 |
| MS.gene029336.t1 | MTR_2g028790 | 57.746 | 213 | 71 | 2 | 2 | 214 | 6 | 199 | 2.71e-90 | 265 |
| MS.gene029336.t1 | MTR_7g058640 | 50.935 | 214 | 86 | 2 | 1 | 214 | 1 | 195 | 5.18e-78 | 234 |
| MS.gene029336.t1 | MTR_7g058640 | 49.479 | 192 | 78 | 2 | 1 | 192 | 1 | 173 | 1.48e-65 | 202 |
| MS.gene029336.t1 | MTR_1g047710 | 50.704 | 142 | 51 | 1 | 65 | 206 | 13 | 135 | 8.12e-47 | 152 |
| MS.gene029336.t1 | MTR_5g089370 | 33.621 | 232 | 132 | 3 | 5 | 235 | 2 | 212 | 3.71e-44 | 148 |
| MS.gene029336.t1 | MTR_4g052550 | 33.190 | 232 | 133 | 4 | 5 | 235 | 2 | 212 | 2.94e-42 | 143 |
| MS.gene029336.t1 | MTR_4g022470 | 51.200 | 125 | 42 | 1 | 65 | 189 | 11 | 116 | 6.33e-41 | 136 |
| MS.gene029336.t1 | MTR_4g115390 | 32.636 | 239 | 130 | 5 | 5 | 238 | 2 | 214 | 2.28e-40 | 138 |
| MS.gene029336.t1 | MTR_7g058640 | 47.059 | 136 | 53 | 2 | 79 | 214 | 1 | 117 | 1.69e-39 | 133 |
| MS.gene029336.t1 | MTR_3g010290 | 22.426 | 272 | 175 | 8 | 3 | 238 | 5 | 276 | 2.08e-15 | 73.9 |
| MS.gene029336.t1 | MTR_4g022550 | 56.452 | 62 | 27 | 0 | 177 | 238 | 10 | 71 | 2.69e-12 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029336.t1 | AT3G54300 | 86.134 | 238 | 33 | 0 | 1 | 238 | 1 | 238 | 3.84e-153 | 425 |
| MS.gene029336.t1 | AT3G54300 | 86.134 | 238 | 33 | 0 | 1 | 238 | 1 | 238 | 3.84e-153 | 425 |
| MS.gene029336.t1 | AT3G54300 | 86.134 | 238 | 33 | 0 | 1 | 238 | 1 | 238 | 3.84e-153 | 425 |
| MS.gene029336.t1 | AT1G04760 | 56.723 | 238 | 84 | 1 | 1 | 238 | 1 | 219 | 7.19e-97 | 282 |
| MS.gene029336.t1 | AT1G04760 | 56.723 | 238 | 84 | 1 | 1 | 238 | 1 | 219 | 7.19e-97 | 282 |
| MS.gene029336.t1 | AT2G32670 | 57.143 | 238 | 83 | 1 | 1 | 238 | 66 | 284 | 1.59e-94 | 278 |
| MS.gene029336.t1 | AT2G33120 | 57.143 | 238 | 83 | 2 | 1 | 238 | 1 | 219 | 3.55e-94 | 275 |
| MS.gene029336.t1 | AT1G04750 | 56.723 | 238 | 84 | 2 | 1 | 238 | 1 | 219 | 1.96e-92 | 271 |
| MS.gene029336.t1 | AT2G33120 | 55.285 | 246 | 83 | 3 | 1 | 238 | 1 | 227 | 3.95e-91 | 268 |
| MS.gene029336.t1 | AT2G33110 | 47.059 | 238 | 103 | 3 | 1 | 238 | 1 | 215 | 7.78e-70 | 213 |
| MS.gene029336.t1 | AT4G15780 | 48.485 | 198 | 82 | 2 | 1 | 197 | 1 | 179 | 6.66e-67 | 205 |
| MS.gene029336.t1 | AT2G33110 | 51.381 | 181 | 69 | 2 | 1 | 181 | 1 | 162 | 3.05e-62 | 193 |
| MS.gene029336.t1 | AT1G04750 | 55.696 | 158 | 51 | 2 | 81 | 238 | 3 | 141 | 2.31e-50 | 161 |
| MS.gene029336.t1 | AT1G04750 | 55.696 | 158 | 51 | 2 | 81 | 238 | 3 | 141 | 2.31e-50 | 161 |
| MS.gene029336.t1 | AT1G04750 | 55.696 | 158 | 51 | 2 | 81 | 238 | 3 | 141 | 2.31e-50 | 161 |
| MS.gene029336.t1 | AT5G11150 | 35.169 | 236 | 125 | 4 | 5 | 238 | 2 | 211 | 2.43e-45 | 151 |
| MS.gene029336.t1 | AT5G11150 | 35.169 | 236 | 125 | 4 | 5 | 238 | 2 | 211 | 4.70e-45 | 150 |
| MS.gene029336.t1 | AT5G22360 | 31.760 | 233 | 136 | 3 | 5 | 235 | 2 | 213 | 1.01e-42 | 144 |
| MS.gene029336.t1 | AT4G32150 | 35.407 | 209 | 113 | 3 | 5 | 212 | 2 | 189 | 5.78e-42 | 142 |
| MS.gene029336.t1 | AT2G25340 | 34.052 | 232 | 131 | 3 | 5 | 235 | 2 | 212 | 7.02e-39 | 134 |
| MS.gene029336.t1 | AT2G33120 | 63.953 | 86 | 31 | 0 | 153 | 238 | 52 | 137 | 8.41e-28 | 103 |
| MS.gene029336.t1 | AT3G24890 | 48.387 | 93 | 42 | 2 | 133 | 219 | 15 | 107 | 5.83e-21 | 85.5 |
| MS.gene029336.t1 | AT3G24890 | 67.442 | 43 | 14 | 0 | 141 | 183 | 23 | 65 | 4.35e-14 | 65.9 |
| MS.gene029336.t1 | AT3G24890 | 67.442 | 43 | 14 | 0 | 141 | 183 | 23 | 65 | 4.35e-14 | 65.9 |
| MS.gene029336.t1 | AT3G24890 | 67.442 | 43 | 14 | 0 | 141 | 183 | 23 | 65 | 4.35e-14 | 65.9 |
| MS.gene029336.t1 | AT3G24890 | 67.442 | 43 | 14 | 0 | 141 | 183 | 23 | 65 | 4.35e-14 | 65.9 |
Find 58 sgRNAs with CRISPR-Local
Find 337 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACAATCTTGATAGAGAATT+TGG | 0.088044 | 1.4:+86019028 | MS.gene029336:CDS |
| TTATCTTAGTTATAATATTA+TGG | 0.161768 | 1.4:+86021556 | MS.gene029336:CDS |
| TGGGGAGAAGATTGAACTTT+TGG | 0.275778 | 1.4:+86021328 | MS.gene029336:CDS |
| ATCACAAGAATAAGTGTATT+TGG | 0.280428 | 1.4:-86017242 | None:intergenic |
| TATCTTAGTTATAATATTAT+GGG | 0.315233 | 1.4:+86021557 | MS.gene029336:CDS |
| GATAGTTTACTCATTTCTTC+AGG | 0.318737 | 1.4:-86019173 | None:intergenic |
| CTCCCACCATCAGCTTCATT+TGG | 0.335673 | 1.4:-86021524 | None:intergenic |
| GTTATGCAGGCCAAGTCTTA+AGG | 0.350766 | 1.4:+86019124 | MS.gene029336:intron |
| AACGGAAAACTTGCAGTTCC+AGG | 0.368337 | 1.4:+86021358 | MS.gene029336:CDS |
| GCAGAACATACTCAATATAC+TGG | 0.382797 | 1.4:+86017166 | MS.gene029336:CDS |
| TTAGCTGCCTGCCCTGCCTC+TGG | 0.383925 | 1.4:-86021476 | None:intergenic |
| GGCTGACAGCTTCCAGAGGC+AGG | 0.400419 | 1.4:+86021464 | MS.gene029336:intron |
| ACAATCTTGATAGAGAATTT+GGG | 0.414431 | 1.4:+86019029 | MS.gene029336:CDS |
| TTCAATTTCCTCTTAGACAA+TGG | 0.420582 | 1.4:+86017274 | MS.gene029336:CDS |
| ATATATAGCTTTGTTGCTAA+AGG | 0.421256 | 1.4:+86017130 | MS.gene029336:CDS |
| TATTATGGGTTATTGCTTGT+GGG | 0.421870 | 1.4:+86021571 | MS.gene029336:CDS |
| ACAGCTTCCAGAGGCAGGGC+AGG | 0.424399 | 1.4:+86021469 | MS.gene029336:CDS |
| GATGACTTTAACCAGCGTTA+TGG | 0.433674 | 1.4:+86018920 | MS.gene029336:CDS |
| TTATGCAGGCCAAGTCTTAA+GGG | 0.435187 | 1.4:+86019125 | MS.gene029336:intron |
| GGCAGGGCAGGCAGCTAAGA+AGG | 0.436079 | 1.4:+86021481 | MS.gene029336:CDS |
| TACCGAATCCATTGTCTAAG+AGG | 0.440698 | 1.4:-86017282 | None:intergenic |
| TTCCTCTTAGACAATGGATT+CGG | 0.441125 | 1.4:+86017280 | MS.gene029336:CDS |
| GAGTAAACTATCAAAGTTGA+AGG | 0.456658 | 1.4:+86019184 | MS.gene029336:CDS |
| GTGTATTTGGTGCTATTTGA+AGG | 0.464053 | 1.4:-86017229 | None:intergenic |
| GTTGTTGCTGATGAATCAAT+TGG | 0.466016 | 1.4:+86018860 | MS.gene029336:CDS |
| ATTATGGGTTATTGCTTGTG+GGG | 0.475053 | 1.4:+86021572 | MS.gene029336:CDS |
| GTTTACTCATTTCTTCAGGA+TGG | 0.480252 | 1.4:-86019169 | None:intergenic |
| ATATTATGGGTTATTGCTTG+TGG | 0.493605 | 1.4:+86021570 | MS.gene029336:CDS |
| GGCTCAAATAACTGAGGTCA+AGG | 0.502250 | 1.4:+86019205 | MS.gene029336:CDS |
| TTTACTCATTTCTTCAGGAT+GGG | 0.513008 | 1.4:-86019168 | None:intergenic |
| TTATGGGTTATTGCTTGTGG+GGG | 0.536160 | 1.4:+86021573 | MS.gene029336:CDS |
| ATTGTCTAAGAGGAAATTGA+AGG | 0.538133 | 1.4:-86017272 | None:intergenic |
| AAATACACTTATTCTTGTGA+TGG | 0.544278 | 1.4:+86017244 | MS.gene029336:CDS |
| CTCAAATAACTGAGGTCAAG+GGG | 0.547294 | 1.4:+86019207 | MS.gene029336:CDS |
| TGCATATGCCCCTTAAGACT+TGG | 0.551661 | 1.4:-86019134 | None:intergenic |
| ATGAAGCTGATGGTGGGAGG+AGG | 0.554494 | 1.4:+86021528 | MS.gene029336:CDS |
| TGAGGTCAAGGGGATAATGA+TGG | 0.556128 | 1.4:+86019217 | MS.gene029336:CDS |
| ATTCAAACATTGAACAGCAA+TGG | 0.561900 | 1.4:-86017200 | None:intergenic |
| ATAATATTATAACTAAGATA+AGG | 0.566690 | 1.4:-86021554 | None:intergenic |
| CATCATCATCAGCAAGTGGA+TGG | 0.582788 | 1.4:-86018967 | None:intergenic |
| TCCTCATCATCATCAGCAAG+TGG | 0.587787 | 1.4:-86018971 | None:intergenic |
| GCTCAAATAACTGAGGTCAA+GGG | 0.590488 | 1.4:+86019206 | MS.gene029336:CDS |
| CTCCAAATGAAGCTGATGGT+GGG | 0.596961 | 1.4:+86021522 | MS.gene029336:CDS |
| AATGATGGATAATATTGAGA+AGG | 0.603558 | 1.4:+86019232 | MS.gene029336:CDS |
| TCTCCAAATGAAGCTGATGG+TGG | 0.603558 | 1.4:+86021521 | MS.gene029336:CDS |
| TAATACTAGCACCATAACGC+TGG | 0.607184 | 1.4:-86018931 | None:intergenic |
| GCTGACAGCTTCCAGAGGCA+GGG | 0.612920 | 1.4:+86021465 | MS.gene029336:CDS |
| TATGCAGGCCAAGTCTTAAG+GGG | 0.622221 | 1.4:+86019126 | MS.gene029336:intron |
| GGCAGCTAAGAAGGAAGATG+TGG | 0.627425 | 1.4:+86021490 | MS.gene029336:CDS |
| TTTGAAGGTGTTGGATCGTG+GGG | 0.629493 | 1.4:+86021310 | MS.gene029336:intron |
| TTGCTGATGAATCAATTGGA+AGG | 0.631302 | 1.4:+86018864 | MS.gene029336:CDS |
| TTGATTCATCAGCAACAACA+AGG | 0.631330 | 1.4:-86018856 | None:intergenic |
| TTTGTGAGAATGAGTCAAAG+GGG | 0.636577 | 1.4:+86017103 | None:intergenic |
| CAAATGAAGCTGATGGTGGG+AGG | 0.647708 | 1.4:+86021525 | MS.gene029336:CDS |
| GAATCTCCAAATGAAGCTGA+TGG | 0.655894 | 1.4:+86021518 | MS.gene029336:CDS |
| TCCACTTGCTGATGATGATG+AGG | 0.664896 | 1.4:+86018970 | MS.gene029336:CDS |
| TTTAGGCTGACAGCTTCCAG+AGG | 0.685949 | 1.4:+86021460 | MS.gene029336:intron |
| GTTGAAGGCTCAAATAACTG+AGG | 0.694430 | 1.4:+86019199 | MS.gene029336:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACTTGAAAAAAATATATATT+GGG | + | chr1.4:86017595-86017614 | MS.gene029336:intron | 10.0% |
| !! | ATAATATTATAACTAAGATA+AGG | - | chr1.4:86021557-86021576 | None:intergenic | 10.0% |
| !! | TATCTTAGTTATAATATTAT+GGG | + | chr1.4:86021557-86021576 | MS.gene029336:CDS | 10.0% |
| !! | TTATCTTAGTTATAATATTA+TGG | + | chr1.4:86021556-86021575 | MS.gene029336:CDS | 10.0% |
| !! | AACAAAATATAATCTTTCAA+CGG | - | chr1.4:86018493-86018512 | None:intergenic | 15.0% |
| !! | ATTTATTTGCGTTAAAATTT+AGG | + | chr1.4:86021443-86021462 | MS.gene029336:intron | 15.0% |
| !! | CACTTGAAAAAAATATATAT+TGG | + | chr1.4:86017594-86017613 | MS.gene029336:intron | 15.0% |
| !! | CTGAAGAATATAATTATATA+AGG | - | chr1.4:86019996-86020015 | None:intergenic | 15.0% |
| !! | TGAAACATAAATCATATATA+CGG | - | chr1.4:86021186-86021205 | None:intergenic | 15.0% |
| !!! | AAAAATGATTTAGGTTTAAA+TGG | + | chr1.4:86019800-86019819 | MS.gene029336:intron | 15.0% |
| !!! | AATTTTTCTTTTGGTTAAAT+TGG | + | chr1.4:86021049-86021068 | MS.gene029336:intron | 15.0% |
| !!! | ATATTTTATGAGTAATCAAA+AGG | - | chr1.4:86020965-86020984 | None:intergenic | 15.0% |
| !!! | ATTTTTCTTTTGGTTAAATT+GGG | + | chr1.4:86021050-86021069 | MS.gene029336:intron | 15.0% |
| !!! | TCAAAAAAAAATTAGTTTCT+AGG | + | chr1.4:86018109-86018128 | MS.gene029336:intron | 15.0% |
| !!! | TTAAACCTAAATCATTTTTA+TGG | - | chr1.4:86019799-86019818 | None:intergenic | 15.0% |
| !!! | TTATAACGATTTGTTTTTTT+TGG | - | chr1.4:86018736-86018755 | None:intergenic | 15.0% |
| !! | AAAATAGTAGGATTCTTTAT+TGG | + | chr1.4:86018251-86018270 | MS.gene029336:intron | 20.0% |
| !! | AATAATGTAAATGTTTGATG+TGG | - | chr1.4:86018284-86018303 | None:intergenic | 20.0% |
| !! | ATAAAACCTTCCAAAAAAAT+TGG | - | chr1.4:86020521-86020540 | None:intergenic | 20.0% |
| !! | ATGTTGTTAAATATAAGAGA+AGG | - | chr1.4:86020825-86020844 | None:intergenic | 20.0% |
| !! | ATTGTCTTTATCTTTATAAC+AGG | + | chr1.4:86020798-86020817 | MS.gene029336:intron | 20.0% |
| !! | GATGAAATATAATCTTTCAA+CGG | - | chr1.4:86018446-86018465 | None:intergenic | 20.0% |
| !! | TAGCTAATAAAAATTGACAT+GGG | + | chr1.4:86020604-86020623 | MS.gene029336:intron | 20.0% |
| !!! | AACTGTGATAATTTTTCTTT+TGG | + | chr1.4:86021040-86021059 | MS.gene029336:intron | 20.0% |
| !!! | ATATACTATACTTTTTATGC+CGG | + | chr1.4:86021115-86021134 | MS.gene029336:intron | 20.0% |
| !!! | CTGCATAAATAATAGTTTTT+AGG | + | chr1.4:86018076-86018095 | MS.gene029336:intron | 20.0% |
| !!! | TATAGTAAGTTTTTGTTGTT+TGG | + | chr1.4:86017385-86017404 | MS.gene029336:intron | 20.0% |
| !!! | TTACTATTCTAGTTTTCTTT+AGG | + | chr1.4:86020038-86020057 | MS.gene029336:intron | 20.0% |
| !!! | TTTTTTTCAAGTGTGTTAAT+CGG | - | chr1.4:86017587-86017606 | None:intergenic | 20.0% |
| ! | AAATACACTTATTCTTGTGA+TGG | + | chr1.4:86017244-86017263 | MS.gene029336:CDS | 25.0% |
| ! | AAGAGAGATAATGAAAAAAC+AGG | + | chr1.4:86017642-86017661 | MS.gene029336:intron | 25.0% |
| ! | ACAAGAAAACATAAGATTGT+AGG | - | chr1.4:86017682-86017701 | None:intergenic | 25.0% |
| ! | ACAATCTTGATAGAGAATTT+GGG | + | chr1.4:86019029-86019048 | MS.gene029336:CDS | 25.0% |
| ! | ACATATTCAGTAGGTTATTT+GGG | - | chr1.4:86018368-86018387 | None:intergenic | 25.0% |
| ! | AGAGAGATAATGAAAAAACA+GGG | + | chr1.4:86017643-86017662 | MS.gene029336:intron | 25.0% |
| ! | AGATTGTCTTAATAATCATC+CGG | - | chr1.4:86021137-86021156 | None:intergenic | 25.0% |
| ! | ATCACAAGAATAAGTGTATT+TGG | - | chr1.4:86017245-86017264 | None:intergenic | 25.0% |
| ! | ATCCCTTGTATATCATTTAA+AGG | - | chr1.4:86019402-86019421 | None:intergenic | 25.0% |
| ! | ATTGTTGTGTATGCTAATAT+GGG | + | chr1.4:86017892-86017911 | MS.gene029336:intron | 25.0% |
| ! | CAAAAACAAAAGAAGATAGA+AGG | + | chr1.4:86017779-86017798 | MS.gene029336:intron | 25.0% |
| ! | CATAAGGAGAATATATTAGA+TGG | + | chr1.4:86019714-86019733 | MS.gene029336:intron | 25.0% |
| ! | CCAAACCATAAAAATGATTT+AGG | + | chr1.4:86019791-86019810 | MS.gene029336:intron | 25.0% |
| ! | CTAGCTAATAAAAATTGACA+TGG | + | chr1.4:86020603-86020622 | MS.gene029336:intron | 25.0% |
| ! | TAAAAAACGCTATAATTGCA+GGG | - | chr1.4:86017358-86017377 | None:intergenic | 25.0% |
| ! | TACAATCTTGATAGAGAATT+TGG | + | chr1.4:86019028-86019047 | MS.gene029336:CDS | 25.0% |
| ! | TACATATTCAGTAGGTTATT+TGG | - | chr1.4:86018369-86018388 | None:intergenic | 25.0% |
| ! | TGCCTTTAAATGATATACAA+GGG | + | chr1.4:86019397-86019416 | MS.gene029336:intron | 25.0% |
| ! | TTGCCTTTAAATGATATACA+AGG | + | chr1.4:86019396-86019415 | MS.gene029336:intron | 25.0% |
| ! | TTTGGATAATAGTTAATACC+TGG | - | chr1.4:86021379-86021398 | None:intergenic | 25.0% |
| !! | ACATAACATACTTTTGGATT+AGG | + | chr1.4:86017930-86017949 | MS.gene029336:intron | 25.0% |
| !! | ATCTCTAAAAATTTGACCAA+AGG | + | chr1.4:86018138-86018157 | MS.gene029336:intron | 25.0% |
| !! | CATAACATACTTTTGGATTA+GGG | + | chr1.4:86017931-86017950 | MS.gene029336:intron | 25.0% |
| !! | CATTTCAACTTTTGATGTTT+AGG | + | chr1.4:86020652-86020671 | MS.gene029336:intron | 25.0% |
| !! | GATTTTAAGCTAAAGTATAC+TGG | - | chr1.4:86019658-86019677 | None:intergenic | 25.0% |
| !! | GTATACTTTAGCTTAAAATC+AGG | + | chr1.4:86019658-86019677 | MS.gene029336:intron | 25.0% |
| !! | TAATCCAAAAGTATGTTATG+TGG | - | chr1.4:86017931-86017950 | None:intergenic | 25.0% |
| !! | TTATATGCATGCATTTTCTA+AGG | + | chr1.4:86020113-86020132 | MS.gene029336:intron | 25.0% |
| !! | TTTTGTGAACAAACCATATT+AGG | + | chr1.4:86017869-86017888 | MS.gene029336:intron | 25.0% |
| !!! | AATGATGGATAATATTGAGA+AGG | + | chr1.4:86019232-86019251 | MS.gene029336:CDS | 25.0% |
| !!! | ATAACATACTTTTGGATTAG+GGG | + | chr1.4:86017932-86017951 | MS.gene029336:intron | 25.0% |
| !!! | ATATATAGCTTTGTTGCTAA+AGG | + | chr1.4:86017130-86017149 | MS.gene029336:CDS | 25.0% |
| !!! | CCTAAATCATTTTTATGGTT+TGG | - | chr1.4:86019794-86019813 | None:intergenic | 25.0% |
| !!! | GAGAAATCTTTCACTTTTTT+TGG | + | chr1.4:86020199-86020218 | MS.gene029336:intron | 25.0% |
| !!! | TGTATTTTGATTATGCTTTC+TGG | + | chr1.4:86019457-86019476 | MS.gene029336:intron | 25.0% |
| !!! | TTAATTGGAGCCAATTTTTT+TGG | + | chr1.4:86020508-86020527 | MS.gene029336:intron | 25.0% |
| !!! | TTATGTTTCAGTTTTAAACC+AGG | + | chr1.4:86021196-86021215 | MS.gene029336:intron | 25.0% |
| AAAAAGTAAAACACCACCTT+TGG | - | chr1.4:86018157-86018176 | None:intergenic | 30.0% | |
| AAGCAAATCTTATAAAGCCA+TGG | - | chr1.4:86020885-86020904 | None:intergenic | 30.0% | |
| AATTTGAAGGAACTCGTATA+GGG | - | chr1.4:86020332-86020351 | None:intergenic | 30.0% | |
| ACAATTTCAAACATAGCTAG+AGG | - | chr1.4:86020783-86020802 | None:intergenic | 30.0% | |
| ACCTAGTTTGGAAAAAACTT+TGG | + | chr1.4:86019574-86019593 | MS.gene029336:intron | 30.0% | |
| AGAGAATCCTTCTAATTTGA+AGG | - | chr1.4:86020345-86020364 | None:intergenic | 30.0% | |
| AGGAGAATATATTAGATGGA+AGG | + | chr1.4:86019718-86019737 | MS.gene029336:intron | 30.0% | |
| ATAGATGAATTCGAGTACTT+TGG | + | chr1.4:86017978-86017997 | MS.gene029336:intron | 30.0% | |
| ATTCAAACATTGAACAGCAA+TGG | - | chr1.4:86017203-86017222 | None:intergenic | 30.0% | |
| ATTGTCTAAGAGGAAATTGA+AGG | - | chr1.4:86017275-86017294 | None:intergenic | 30.0% | |
| CATACACAACAATCCTAATA+TGG | - | chr1.4:86017885-86017904 | None:intergenic | 30.0% | |
| CGATAAACAATGACATCATT+TGG | + | chr1.4:86019534-86019553 | MS.gene029336:intron | 30.0% | |
| CTAAAAAACGCTATAATTGC+AGG | - | chr1.4:86017359-86017378 | None:intergenic | 30.0% | |
| GAGAGATAATGAAAAAACAG+GGG | + | chr1.4:86017644-86017663 | MS.gene029336:intron | 30.0% | |
| GAGTAAACTATCAAAGTTGA+AGG | + | chr1.4:86019184-86019203 | MS.gene029336:CDS | 30.0% | |
| GATAGTTTACTCATTTCTTC+AGG | - | chr1.4:86019176-86019195 | None:intergenic | 30.0% | |
| GATTGTTGTGTATGCTAATA+TGG | + | chr1.4:86017891-86017910 | MS.gene029336:intron | 30.0% | |
| GTAAATGTTTGATGTGGATT+CGG | - | chr1.4:86018278-86018297 | None:intergenic | 30.0% | |
| TAATTTGAAGGAACTCGTAT+AGG | - | chr1.4:86020333-86020352 | None:intergenic | 30.0% | |
| TAGTTTGGAAAAAACTTTGG+TGG | + | chr1.4:86019577-86019596 | MS.gene029336:intron | 30.0% | |
| TCATTTCAAGAAGTTACGAA+AGG | + | chr1.4:86019960-86019979 | MS.gene029336:intron | 30.0% | |
| TCTAAAAATTTGACCAAAGG+TGG | + | chr1.4:86018141-86018160 | MS.gene029336:intron | 30.0% | |
| TGGTTATGATATTCTTACCT+GGG | + | chr1.4:86019597-86019616 | MS.gene029336:intron | 30.0% | |
| TTATGTCACATGTGAATTTG+CGG | + | chr1.4:86018604-86018623 | MS.gene029336:intron | 30.0% | |
| TTCAATTTCCTCTTAGACAA+TGG | + | chr1.4:86017274-86017293 | MS.gene029336:CDS | 30.0% | |
| TTTACTCATTTCTTCAGGAT+GGG | - | chr1.4:86019171-86019190 | None:intergenic | 30.0% | |
| ! | AAAAAGAGAAATAGAAGTGC+AGG | + | chr1.4:86017818-86017837 | MS.gene029336:intron | 30.0% |
| ! | AAAAATAGAGGACTTTGAGA+CGG | - | chr1.4:86020401-86020420 | None:intergenic | 30.0% |
| ! | AAATGCATGAGTGTGTTATT+AGG | - | chr1.4:86019264-86019283 | None:intergenic | 30.0% |
| ! | AAATGTTTTCTTCTGATTCC+TGG | - | chr1.4:86021217-86021236 | None:intergenic | 30.0% |
| ! | ATATAGAAGCTTTTCCCATT+AGG | - | chr1.4:86019885-86019904 | None:intergenic | 30.0% |
| ! | ATATTATGGGTTATTGCTTG+TGG | + | chr1.4:86021570-86021589 | MS.gene029336:CDS | 30.0% |
| ! | TATTATGGGTTATTGCTTGT+GGG | + | chr1.4:86021571-86021590 | MS.gene029336:CDS | 30.0% |
| !! | ATGGCTTTATAAGATTTGCT+TGG | + | chr1.4:86020884-86020903 | MS.gene029336:intron | 30.0% |
| !! | TAAGAGTGTTTAGATGTGTA+TGG | + | chr1.4:86019490-86019509 | MS.gene029336:intron | 30.0% |
| !! | TGAACTTTTGGTGGATAAAA+CGG | + | chr1.4:86021340-86021359 | MS.gene029336:CDS | 30.0% |
| !! | TGGCTTTATAAGATTTGCTT+GGG | + | chr1.4:86020885-86020904 | MS.gene029336:intron | 30.0% |
| !! | TTTTGATTATGCTTTCTGGT+TGG | + | chr1.4:86019461-86019480 | MS.gene029336:intron | 30.0% |
| !!! | AAAGTTTTTTCCAAACTAGG+TGG | - | chr1.4:86019575-86019594 | None:intergenic | 30.0% |
| !!! | ACCAAAGTTTTTTCCAAACT+AGG | - | chr1.4:86019578-86019597 | None:intergenic | 30.0% |
| !!! | CATTTTCTAAGGCATTGTTT+GGG | + | chr1.4:86020124-86020143 | MS.gene029336:intron | 30.0% |
| !!! | TTCCTTTTGTGTTTTTGGAA+CGG | + | chr1.4:86018891-86018910 | MS.gene029336:CDS | 30.0% |
| AAGATAGGCCAAGAATTTAC+AGG | + | chr1.4:86019760-86019779 | MS.gene029336:intron | 35.0% | |
| ACGAGTTCCTTCAAATTAGA+AGG | + | chr1.4:86020335-86020354 | MS.gene029336:intron | 35.0% | |
| AGACGGAACTTTCTGTTAAT+TGG | + | chr1.4:86020493-86020512 | MS.gene029336:intron | 35.0% | |
| AGATAATGAAAAAACAGGGG+AGG | + | chr1.4:86017647-86017666 | MS.gene029336:intron | 35.0% | |
| AGTTCGGAAATGTTTGGATT+TGG | - | chr1.4:86021397-86021416 | None:intergenic | 35.0% | |
| ATATCAAAGCCAACTCAATG+AGG | - | chr1.4:86018405-86018424 | None:intergenic | 35.0% | |
| ATATCACTGGATCAACATGT+AGG | + | chr1.4:86020702-86020721 | MS.gene029336:intron | 35.0% | |
| ATATTAGATGGAAGGTAGTC+TGG | + | chr1.4:86019726-86019745 | MS.gene029336:intron | 35.0% | |
| ATCACAGTTAAAACCTCTGT+TGG | - | chr1.4:86021029-86021048 | None:intergenic | 35.0% | |
| ATTTGAAGGAACTCGTATAG+GGG | - | chr1.4:86020331-86020350 | None:intergenic | 35.0% | |
| CAACAGTCTTCAAATTTGCA+GGG | - | chr1.4:86017418-86017437 | None:intergenic | 35.0% | |
| CAGTAGATTGTTTCAGAGTT+CGG | - | chr1.4:86021413-86021432 | None:intergenic | 35.0% | |
| CTTATGATACTCTATCGTCT+TGG | - | chr1.4:86019700-86019719 | None:intergenic | 35.0% | |
| CTTTGGACACTTTAGGTAAA+AGG | + | chr1.4:86017995-86018014 | MS.gene029336:intron | 35.0% | |
| GCAGAACATACTCAATATAC+TGG | + | chr1.4:86017166-86017185 | MS.gene029336:CDS | 35.0% | |
| GGTTAGTGACATGAATCAAA+TGG | - | chr1.4:86019859-86019878 | None:intergenic | 35.0% | |
| GGTTATGATATTCTTACCTG+GGG | + | chr1.4:86019598-86019617 | MS.gene029336:intron | 35.0% | |
| GTCACATGGCATGATTATAT+GGG | - | chr1.4:86017467-86017486 | None:intergenic | 35.0% | |
| GTGCTTTGTATTCAGAAACA+TGG | - | chr1.4:86021264-86021283 | None:intergenic | 35.0% | |
| GTGGTTATGATATTCTTACC+TGG | + | chr1.4:86019596-86019615 | MS.gene029336:intron | 35.0% | |
| GTTATGATATTCTTACCTGG+GGG | + | chr1.4:86019599-86019618 | MS.gene029336:intron | 35.0% | |
| GTTGTTGCTGATGAATCAAT+TGG | + | chr1.4:86018860-86018879 | MS.gene029336:CDS | 35.0% | |
| GTTTACTCATTTCTTCAGGA+TGG | - | chr1.4:86019172-86019191 | None:intergenic | 35.0% | |
| TCACATGGCATGATTATATG+GGG | - | chr1.4:86017466-86017485 | None:intergenic | 35.0% | |
| TCTTGATAGAGAATTTGGGT+TGG | + | chr1.4:86019033-86019052 | MS.gene029336:intron | 35.0% | |
| TTAAATTGGGATACTGCAGA+GGG | + | chr1.4:86021063-86021082 | MS.gene029336:intron | 35.0% | |
| TTATGATATTCTTACCTGGG+GGG | + | chr1.4:86019600-86019619 | MS.gene029336:intron | 35.0% | |
| TTGATTCATCAGCAACAACA+AGG | - | chr1.4:86018859-86018878 | None:intergenic | 35.0% | |
| TTGCTGATGAATCAATTGGA+AGG | + | chr1.4:86018864-86018883 | MS.gene029336:CDS | 35.0% | |
| TTTCAGAGTTCGGAAATGTT+TGG | - | chr1.4:86021403-86021422 | None:intergenic | 35.0% | |
| ! | AAGAAATTATCGATTGAGCC+CGG | - | chr1.4:86017543-86017562 | None:intergenic | 35.0% |
| ! | AGGTGCAACACTAATTTTTC+AGG | - | chr1.4:86017714-86017733 | None:intergenic | 35.0% |
| ! | ATTATGGGTTATTGCTTGTG+GGG | + | chr1.4:86021572-86021591 | MS.gene029336:CDS | 35.0% |
| ! | CAAGACGATAGAGTATCATA+AGG | + | chr1.4:86019698-86019717 | MS.gene029336:intron | 35.0% |
| ! | GAGTGTTCCTTTTGTGTTTT+TGG | + | chr1.4:86018886-86018905 | MS.gene029336:CDS | 35.0% |
| ! | GATGTTTAGGCATACTGATT+AGG | + | chr1.4:86020665-86020684 | MS.gene029336:intron | 35.0% |
| ! | GGTGCAACACTAATTTTTCA+GGG | - | chr1.4:86017713-86017732 | None:intergenic | 35.0% |
| ! | TAGGCATACTGATTAGGATT+TGG | + | chr1.4:86020671-86020690 | MS.gene029336:intron | 35.0% |
| ! | TTCCTCTTAGACAATGGATT+CGG | + | chr1.4:86017280-86017299 | MS.gene029336:CDS | 35.0% |
| ! | TTGGCCACATAACATACTTT+TGG | + | chr1.4:86017924-86017943 | MS.gene029336:intron | 35.0% |
| !! | AAAATAGAGGACTTTGAGAC+GGG | - | chr1.4:86020400-86020419 | None:intergenic | 35.0% |
| !! | GTGCAACACTAATTTTTCAG+GGG | - | chr1.4:86017712-86017731 | None:intergenic | 35.0% |
| !! | GTGTATTTGGTGCTATTTGA+AGG | - | chr1.4:86017232-86017251 | None:intergenic | 35.0% |
| !! | TGAGTTGGCTTTGATATTGT+CGG | + | chr1.4:86018408-86018427 | MS.gene029336:intron | 35.0% |
| !! | TTTAGTTCTGTCGTCATACA+CGG | + | chr1.4:86017440-86017459 | MS.gene029336:intron | 35.0% |
| !!! | ATTTGCACTCGTTGTTTTGA+AGG | + | chr1.4:86021295-86021314 | MS.gene029336:intron | 35.0% |
| !!! | GCATTTTCTAAGGCATTGTT+TGG | + | chr1.4:86020123-86020142 | MS.gene029336:intron | 35.0% |
| !!! | GTATTTTGATCTCGTTATGC+AGG | + | chr1.4:86019111-86019130 | MS.gene029336:intron | 35.0% |
| !!! | TCCTTTTGTGTTTTTGGAAC+GGG | + | chr1.4:86018892-86018911 | MS.gene029336:CDS | 35.0% |
| !!! | TGCAACACTAATTTTTCAGG+GGG | - | chr1.4:86017711-86017730 | None:intergenic | 35.0% |
| !!! | TTGGAGCCAATTTTTTTGGA+AGG | + | chr1.4:86020512-86020531 | MS.gene029336:intron | 35.0% |
| AATCTTATAAAGCCATGGCC+TGG | - | chr1.4:86020880-86020899 | None:intergenic | 40.0% | |
| AATCTTCATCTAGTCCCACT+CGG | - | chr1.4:86020081-86020100 | None:intergenic | 40.0% | |
| ACAGAAAGTTCCGTCTCTTT+AGG | - | chr1.4:86020489-86020508 | None:intergenic | 40.0% | |
| ACCCGTTCCAAAAACACAAA+AGG | - | chr1.4:86018896-86018915 | None:intergenic | 40.0% | |
| AGACCCTAAATCAGCTCATT+GGG | - | chr1.4:86018678-86018697 | None:intergenic | 40.0% | |
| ATTTACTAGATCTGCTGCCA+TGG | + | chr1.4:86018796-86018815 | MS.gene029336:intron | 40.0% | |
| CACATGTTATGTAACAGCCA+TGG | - | chr1.4:86018816-86018835 | None:intergenic | 40.0% | |
| CGCTTGATCCTGTAAATTCT+TGG | - | chr1.4:86019771-86019790 | None:intergenic | 40.0% | |
| CGTCACATGGCATGATTATA+TGG | - | chr1.4:86017468-86017487 | None:intergenic | 40.0% | |
| CTAATCAACTCCACCTAGTT+TGG | + | chr1.4:86019562-86019581 | MS.gene029336:intron | 40.0% | |
| CTCAAATAACTGAGGTCAAG+GGG | + | chr1.4:86019207-86019226 | MS.gene029336:CDS | 40.0% | |
| GAATCTCCAAATGAAGCTGA+TGG | + | chr1.4:86021518-86021537 | MS.gene029336:CDS | 40.0% | |
| GATGACTTTAACCAGCGTTA+TGG | + | chr1.4:86018920-86018939 | MS.gene029336:CDS | 40.0% | |
| GCAAACAAAGCCTAAAGAGA+CGG | + | chr1.4:86020476-86020495 | MS.gene029336:intron | 40.0% | |
| GCAACAGTCTTCAAATTTGC+AGG | - | chr1.4:86017419-86017438 | None:intergenic | 40.0% | |
| GCATGCATATAATGCTCAAC+TGG | - | chr1.4:86020105-86020124 | None:intergenic | 40.0% | |
| GCTCAAATAACTGAGGTCAA+GGG | + | chr1.4:86019206-86019225 | MS.gene029336:CDS | 40.0% | |
| GTGTATGCTAATATGGGCTT+GGG | + | chr1.4:86017898-86017917 | MS.gene029336:intron | 40.0% | |
| GTTAAATTGGGATACTGCAG+AGG | + | chr1.4:86021062-86021081 | MS.gene029336:intron | 40.0% | |
| GTTGAAGGCTCAAATAACTG+AGG | + | chr1.4:86019199-86019218 | MS.gene029336:CDS | 40.0% | |
| TAATACTAGCACCATAACGC+TGG | - | chr1.4:86018934-86018953 | None:intergenic | 40.0% | |
| TACCGAATCCATTGTCTAAG+AGG | - | chr1.4:86017285-86017304 | None:intergenic | 40.0% | |
| TAGACCCTAAATCAGCTCAT+TGG | - | chr1.4:86018679-86018698 | None:intergenic | 40.0% | |
| TCGAGTACTTTGGACACTTT+AGG | + | chr1.4:86017988-86018007 | MS.gene029336:intron | 40.0% | |
| TGTGTATGCTAATATGGGCT+TGG | + | chr1.4:86017897-86017916 | MS.gene029336:intron | 40.0% | |
| TGTTGATCCAGTGATATGAG+AGG | - | chr1.4:86020699-86020718 | None:intergenic | 40.0% | |
| TTATGCAGGCCAAGTCTTAA+GGG | + | chr1.4:86019125-86019144 | MS.gene029336:intron | 40.0% | |
| TTTGAAGGAACTCGTATAGG+GGG | - | chr1.4:86020330-86020349 | None:intergenic | 40.0% | |
| TTTGGATCCTCTCATATCAC+TGG | + | chr1.4:86020689-86020708 | MS.gene029336:intron | 40.0% | |
| ! | AAAGTATCCAGCCATGATGA+AGG | + | chr1.4:86020756-86020775 | MS.gene029336:intron | 40.0% |
| ! | ACTAGGTGGAGTTGATTAGA+TGG | - | chr1.4:86019561-86019580 | None:intergenic | 40.0% |
| ! | AGAAATTATCGATTGAGCCC+GGG | - | chr1.4:86017542-86017561 | None:intergenic | 40.0% |
| ! | AGAAGCTTTTCCCATTAGGT+CGG | - | chr1.4:86019881-86019900 | None:intergenic | 40.0% |
| ! | ATGTTTTCAGCGCTAATGCT+TGG | + | chr1.4:86019320-86019339 | MS.gene029336:intron | 40.0% |
| ! | CAAGTGTGTTAATCGGCTTT+GGG | - | chr1.4:86017580-86017599 | None:intergenic | 40.0% |
| ! | CCAACTCAATGAGGTTTGTT+GGG | - | chr1.4:86018396-86018415 | None:intergenic | 40.0% |
| ! | GGAGAAGATTGAACTTTTGG+TGG | + | chr1.4:86021331-86021350 | MS.gene029336:CDS | 40.0% |
| ! | TCAAGTGTGTTAATCGGCTT+TGG | - | chr1.4:86017581-86017600 | None:intergenic | 40.0% |
| ! | TGGGGAGAAGATTGAACTTT+TGG | + | chr1.4:86021328-86021347 | MS.gene029336:CDS | 40.0% |
| ! | TGGGGGTATACATATTCAGT+AGG | - | chr1.4:86018377-86018396 | None:intergenic | 40.0% |
| ! | TTATGGGTTATTGCTTGTGG+GGG | + | chr1.4:86021573-86021592 | MS.gene029336:CDS | 40.0% |
| !! | AACTCAATGAGGTTTGTTGG+GGG | - | chr1.4:86018394-86018413 | None:intergenic | 40.0% |
| !! | ATACTACCTAGTCTTGTGTC+TGG | + | chr1.4:86019348-86019367 | MS.gene029336:intron | 40.0% |
| !! | CAACTCAATGAGGTTTGTTG+GGG | - | chr1.4:86018395-86018414 | None:intergenic | 40.0% |
| !! | GTCTCTTTAGGCTTTGTTTG+CGG | - | chr1.4:86020477-86020496 | None:intergenic | 40.0% |
| !! | TAAGGCATTGTTTGGGAGTT+TGG | + | chr1.4:86020131-86020150 | MS.gene029336:intron | 40.0% |
| !! | TCTCTTTAGGCTTTGTTTGC+GGG | - | chr1.4:86020476-86020495 | None:intergenic | 40.0% |
| !!! | ACTCGTTGTTTTGAAGGTGT+TGG | + | chr1.4:86021301-86021320 | MS.gene029336:intron | 40.0% |
| !!! | TTTTGAAGGTGTTGGATCGT+GGG | + | chr1.4:86021309-86021328 | MS.gene029336:intron | 40.0% |
| AACGGAAAACTTGCAGTTCC+AGG | + | chr1.4:86021358-86021377 | MS.gene029336:CDS | 45.0% | |
| ATCTTCATCTAGTCCCACTC+GGG | - | chr1.4:86020080-86020099 | None:intergenic | 45.0% | |
| ATGTCACTAACCCGACCTAA+TGG | + | chr1.4:86019867-86019886 | MS.gene029336:intron | 45.0% | |
| CATCATCATCAGCAAGTGGA+TGG | - | chr1.4:86018970-86018989 | None:intergenic | 45.0% | |
| CATTGTTTGGGAGTTTGGAG+GGG | + | chr1.4:86020136-86020155 | MS.gene029336:intron | 45.0% | |
| CCCAACAAACCTCATTGAGT+TGG | + | chr1.4:86018393-86018412 | MS.gene029336:intron | 45.0% | |
| CTAATATGGGCTTGGGTCTT+TGG | + | chr1.4:86017905-86017924 | MS.gene029336:intron | 45.0% | |
| CTCCAAATGAAGCTGATGGT+GGG | + | chr1.4:86021522-86021541 | MS.gene029336:CDS | 45.0% | |
| CTGGAAGTTAGCGGTAAGAT+AGG | + | chr1.4:86019745-86019764 | MS.gene029336:intron | 45.0% | |
| GAAGGTAGTCTGGAAGTTAG+CGG | + | chr1.4:86019736-86019755 | MS.gene029336:intron | 45.0% | |
| GAGGGATTTGGGAAAAAGGA+AGG | - | chr1.4:86020434-86020453 | None:intergenic | 45.0% | |
| GCATTGTTTGGGAGTTTGGA+GGG | + | chr1.4:86020135-86020154 | MS.gene029336:intron | 45.0% | |
| GCCAACTCAATGAGGTTTGT+TGG | - | chr1.4:86018397-86018416 | None:intergenic | 45.0% | |
| GGACAAAGAAGAAGAAGGTG+TGG | + | chr1.4:86017839-86017858 | MS.gene029336:intron | 45.0% | |
| GGAGCGAGTGGAAAAAATAG+AGG | - | chr1.4:86020413-86020432 | None:intergenic | 45.0% | |
| GGCTCAAATAACTGAGGTCA+AGG | + | chr1.4:86019205-86019224 | MS.gene029336:CDS | 45.0% | |
| GTGCAGGACAAAGAAGAAGA+AGG | + | chr1.4:86017834-86017853 | MS.gene029336:intron | 45.0% | |
| GTGTGTGAGAGAGAAACTCA+AGG | - | chr1.4:86017734-86017753 | None:intergenic | 45.0% | |
| GTTATGCAGGCCAAGTCTTA+AGG | + | chr1.4:86019124-86019143 | MS.gene029336:intron | 45.0% | |
| TAGCTAGAGGACCTTCATCA+TGG | - | chr1.4:86020770-86020789 | None:intergenic | 45.0% | |
| TATGCAGGCCAAGTCTTAAG+GGG | + | chr1.4:86019126-86019145 | MS.gene029336:intron | 45.0% | |
| TCCTCATCATCATCAGCAAG+TGG | - | chr1.4:86018974-86018993 | None:intergenic | 45.0% | |
| TCGCGGTACATTCAATTCAG+TGG | - | chr1.4:86018344-86018363 | None:intergenic | 45.0% | |
| TCTCCAAATGAAGCTGATGG+TGG | + | chr1.4:86021521-86021540 | MS.gene029336:CDS | 45.0% | |
| TCTGACAGTTAGACCAACAG+AGG | + | chr1.4:86021013-86021032 | MS.gene029336:intron | 45.0% | |
| TGAGGTCAAGGGGATAATGA+TGG | + | chr1.4:86019217-86019236 | MS.gene029336:CDS | 45.0% | |
| TGCATATGCCCCTTAAGACT+TGG | - | chr1.4:86019137-86019156 | None:intergenic | 45.0% | |
| TGTCACTAACCCGACCTAAT+GGG | + | chr1.4:86019868-86019887 | MS.gene029336:intron | 45.0% | |
| TGTGGGGGTGAAAACGTATA+GGG | + | chr1.4:86020169-86020188 | MS.gene029336:intron | 45.0% | |
| TTCAATTCAGTGGCGTATCC+AGG | - | chr1.4:86018334-86018353 | None:intergenic | 45.0% | |
| ! | CAGTAGGTTATTTGGGTTCG+CGG | - | chr1.4:86018361-86018380 | None:intergenic | 45.0% |
| ! | CCAGGATTTTCATAGAGCCT+GGG | - | chr1.4:86018641-86018660 | None:intergenic | 45.0% |
| ! | GAAGCTTTTCCCATTAGGTC+GGG | - | chr1.4:86019880-86019899 | None:intergenic | 45.0% |
| ! | TCCACTTGCTGATGATGATG+AGG | + | chr1.4:86018970-86018989 | MS.gene029336:CDS | 45.0% |
| ! | TGGCCCAATGAGCTGATTTA+GGG | + | chr1.4:86018672-86018691 | MS.gene029336:intron | 45.0% |
| !! | AATCAGGAAAGCACCTGTTG+TGG | + | chr1.4:86019674-86019693 | MS.gene029336:intron | 45.0% |
| !! | TTAGGCTTTGTTTGCGGGTT+TGG | - | chr1.4:86020471-86020490 | None:intergenic | 45.0% |
| !! | TTTGAAGGTGTTGGATCGTG+GGG | + | chr1.4:86021310-86021329 | MS.gene029336:intron | 45.0% |
| !!! | GTTTTGAAGGTGTTGGATCG+TGG | + | chr1.4:86021308-86021327 | MS.gene029336:intron | 45.0% |
| !!! | TGTGTTTTTGGAACGGGTGA+AGG | + | chr1.4:86018898-86018917 | MS.gene029336:CDS | 45.0% |
| !!! | TTGCGGTAATTTTTTCGCCC+AGG | + | chr1.4:86018621-86018640 | MS.gene029336:intron | 45.0% |
| !! | TTAAAATTATTAAAAATAGT+AGG | + | chr1.4:86018239-86018258 | MS.gene029336:intron | 5.0% |
| !! | TTTACAATAATAAAAATTAA+TGG | + | chr1.4:86018196-86018215 | MS.gene029336:intron | 5.0% |
| AAGGAACTCGTATAGGGGGA+GGG | - | chr1.4:86020326-86020345 | None:intergenic | 50.0% | |
| ACTCCATTGAATTGCCCGAG+TGG | + | chr1.4:86020063-86020082 | MS.gene029336:intron | 50.0% | |
| ACTCGGGCAATTCAATGGAG+TGG | - | chr1.4:86020064-86020083 | None:intergenic | 50.0% | |
| AGGGGAGGGATTTGGGAAAA+AGG | - | chr1.4:86020438-86020457 | None:intergenic | 50.0% | |
| CCCAGGCTCTATGAAAATCC+TGG | + | chr1.4:86018638-86018657 | MS.gene029336:intron | 50.0% | |
| CTCCATTGAATTGCCCGAGT+GGG | + | chr1.4:86020064-86020083 | MS.gene029336:intron | 50.0% | |
| CTCCCACCATCAGCTTCATT+TGG | - | chr1.4:86021527-86021546 | None:intergenic | 50.0% | |
| CTGTGGGGGTGAAAACGTAT+AGG | + | chr1.4:86020168-86020187 | MS.gene029336:intron | 50.0% | |
| GGCAGCTAAGAAGGAAGATG+TGG | + | chr1.4:86021490-86021509 | MS.gene029336:CDS | 50.0% | |
| GGCATTGTTTGGGAGTTTGG+AGG | + | chr1.4:86020134-86020153 | MS.gene029336:intron | 50.0% | |
| GTGCATCCAGACACAAGACT+AGG | - | chr1.4:86019357-86019376 | None:intergenic | 50.0% | |
| TAGAGGACCTTCATCATGGC+TGG | - | chr1.4:86020766-86020785 | None:intergenic | 50.0% | |
| TATTTCTCTACTGCACCCCC+TGG | + | chr1.4:86018300-86018319 | MS.gene029336:intron | 50.0% | |
| TCTATCGTCTTGGCCACAAC+AGG | - | chr1.4:86019690-86019709 | None:intergenic | 50.0% | |
| TTTAGGCTGACAGCTTCCAG+AGG | + | chr1.4:86021460-86021479 | MS.gene029336:intron | 50.0% | |
| TTTGCGGGTTTGGAAGGCAA+TGG | - | chr1.4:86020461-86020480 | None:intergenic | 50.0% | |
| ! | GCCAGGATTTTCATAGAGCC+TGG | - | chr1.4:86018642-86018661 | None:intergenic | 50.0% |
| ! | GTGGCCCAATGAGCTGATTT+AGG | + | chr1.4:86018671-86018690 | MS.gene029336:intron | 50.0% |
| !! | ATAGAGGACTTTGAGACGGG+AGG | - | chr1.4:86020397-86020416 | None:intergenic | 50.0% |
| !! | CAAATGAAGCTGATGGTGGG+AGG | + | chr1.4:86021525-86021544 | MS.gene029336:CDS | 50.0% |
| !! | GCTTTGTTTGCGGGTTTGGA+AGG | - | chr1.4:86020467-86020486 | None:intergenic | 50.0% |
| !! | TAGAGGACTTTGAGACGGGA+GGG | - | chr1.4:86020396-86020415 | None:intergenic | 50.0% |
| ATCAGCTCATTGGGCCACAG+TGG | - | chr1.4:86018669-86018688 | None:intergenic | 55.0% | |
| ATTCTTACCTGGGGGGACTC+AGG | + | chr1.4:86019607-86019626 | MS.gene029336:intron | 55.0% | |
| CATGTGCTAGCGTCTCTTCC+AGG | + | chr1.4:86020859-86020878 | MS.gene029336:intron | 55.0% | |
| CGGGTTTGGAAGGCAATGGA+GGG | - | chr1.4:86020457-86020476 | None:intergenic | 55.0% | |
| CTGGAAGAGACGCTAGCACA+TGG | - | chr1.4:86020861-86020880 | None:intergenic | 55.0% | |
| GAAGGAACTCGTATAGGGGG+AGG | - | chr1.4:86020327-86020346 | None:intergenic | 55.0% | |
| GAGACGCTAGCACATGGATC+TGG | - | chr1.4:86020855-86020874 | None:intergenic | 55.0% | |
| GCAATGGAGGGGAGGGATTT+GGG | - | chr1.4:86020445-86020464 | None:intergenic | 55.0% | |
| GGGAAAAAGGAAGGAGCGAG+TGG | - | chr1.4:86020425-86020444 | None:intergenic | 55.0% | |
| GGGTTTGGAAGGCAATGGAG+GGG | - | chr1.4:86020456-86020475 | None:intergenic | 55.0% | |
| GTCCCACTCGGGCAATTCAA+TGG | - | chr1.4:86020069-86020088 | None:intergenic | 55.0% | |
| TCATGCCATGTGACGCCACA+TGG | + | chr1.4:86017473-86017492 | MS.gene029336:intron | 55.0% | |
| TTGGAAGGCAATGGAGGGGA+GGG | - | chr1.4:86020452-86020471 | None:intergenic | 55.0% | |
| TTTGGAAGGCAATGGAGGGG+AGG | - | chr1.4:86020453-86020472 | None:intergenic | 55.0% | |
| TTTGGGAGTTTGGAGGGGAG+TGG | + | chr1.4:86020141-86020160 | MS.gene029336:intron | 55.0% | |
| ! | GAAGAAGAAGGTGTGGCGTC+TGG | + | chr1.4:86017846-86017865 | MS.gene029336:intron | 55.0% |
| ! | GCGGTAGATGTGCCACTGTT+GGG | - | chr1.4:86017499-86017518 | None:intergenic | 55.0% |
| !! | ACTTTGAGACGGGAGGGCTT+TGG | - | chr1.4:86020390-86020409 | None:intergenic | 55.0% |
| !! | ATGAAGCTGATGGTGGGAGG+AGG | + | chr1.4:86021528-86021547 | MS.gene029336:CDS | 55.0% |
| !! | CTTTGAGACGGGAGGGCTTT+GGG | - | chr1.4:86020389-86020408 | None:intergenic | 55.0% |
| AAATCCTGGCTCCGCCACTG+TGG | + | chr1.4:86018652-86018671 | MS.gene029336:intron | 60.0% | |
| ACAGTGGCACATCTACCGCC+CGG | + | chr1.4:86017500-86017519 | MS.gene029336:intron | 60.0% | |
| AGCTCATTGGGCCACAGTGG+CGG | - | chr1.4:86018666-86018685 | None:intergenic | 60.0% | |
| CTAGCGTCTCTTCCAGGCCA+TGG | + | chr1.4:86020865-86020884 | MS.gene029336:intron | 60.0% | |
| GCGGGTTTGGAAGGCAATGG+AGG | - | chr1.4:86020458-86020477 | None:intergenic | 60.0% | |
| GCTGACAGCTTCCAGAGGCA+GGG | + | chr1.4:86021465-86021484 | MS.gene029336:CDS | 60.0% | |
| GGAGTTTGGAGGGGAGTGGA+GGG | + | chr1.4:86020145-86020164 | MS.gene029336:intron | 60.0% | |
| GGCAATGGAGGGGAGGGATT+TGG | - | chr1.4:86020446-86020465 | None:intergenic | 60.0% | |
| GTATCCAGGACCCTGGTCCA+GGG | - | chr1.4:86018320-86018339 | None:intergenic | 60.0% | |
| TATCCAGGACCCTGGTCCAG+GGG | - | chr1.4:86018319-86018338 | None:intergenic | 60.0% | |
| TTGGGCCATGTGGCGTCACA+TGG | - | chr1.4:86017481-86017500 | None:intergenic | 60.0% | |
| ! | GGCGGTAGATGTGCCACTGT+TGG | - | chr1.4:86017500-86017519 | None:intergenic | 60.0% |
| ! | TGTGCCACTGTTGGGCCATG+TGG | - | chr1.4:86017491-86017510 | None:intergenic | 60.0% |
| ACAGCTTCCAGAGGCAGGGC+AGG | + | chr1.4:86021469-86021488 | MS.gene029336:CDS | 65.0% | |
| AGTGCTTCCTGAGTCCCCCC+AGG | - | chr1.4:86019617-86019636 | None:intergenic | 65.0% | |
| ATCCAGGACCCTGGTCCAGG+GGG | - | chr1.4:86018318-86018337 | None:intergenic | 65.0% | |
| CAGTGGCGTATCCAGGACCC+TGG | - | chr1.4:86018327-86018346 | None:intergenic | 65.0% | |
| CGTATCCAGGACCCTGGTCC+AGG | - | chr1.4:86018321-86018340 | None:intergenic | 65.0% | |
| CTACTGCACCCCCTGGACCA+GGG | + | chr1.4:86018307-86018326 | MS.gene029336:intron | 65.0% | |
| GACGCCACATGGCCCAACAG+TGG | + | chr1.4:86017484-86017503 | MS.gene029336:intron | 65.0% | |
| GGCAGGGCAGGCAGCTAAGA+AGG | + | chr1.4:86021481-86021500 | MS.gene029336:CDS | 65.0% | |
| GGCTGACAGCTTCCAGAGGC+AGG | + | chr1.4:86021464-86021483 | MS.gene029336:intron | 65.0% | |
| GGGAGTTTGGAGGGGAGTGG+AGG | + | chr1.4:86020144-86020163 | MS.gene029336:intron | 65.0% | |
| TCTACTGCACCCCCTGGACC+AGG | + | chr1.4:86018306-86018325 | MS.gene029336:intron | 65.0% | |
| TTAGCTGCCTGCCCTGCCTC+TGG | - | chr1.4:86021479-86021498 | None:intergenic | 65.0% | |
| !! | TGAGACGGGAGGGCTTTGGG+CGG | - | chr1.4:86020386-86020405 | None:intergenic | 65.0% |
| AGGGGAGTGGAGGGCTGTGG+GGG | + | chr1.4:86020154-86020173 | MS.gene029336:intron | 70.0% | |
| ATTGAGCCCGGGCGAGTGCC+CGG | - | chr1.4:86017531-86017550 | None:intergenic | 70.0% | |
| GAGGGGAGTGGAGGGCTGTG+GGG | + | chr1.4:86020153-86020172 | MS.gene029336:intron | 70.0% | |
| GCAGAGGGTCTGAGTCCCGC+TGG | + | chr1.4:86021078-86021097 | MS.gene029336:intron | 70.0% | |
| GGAGGGGAGTGGAGGGCTGT+GGG | + | chr1.4:86020152-86020171 | MS.gene029336:intron | 70.0% | |
| TGGAGGGGAGTGGAGGGCTG+TGG | + | chr1.4:86020151-86020170 | MS.gene029336:intron | 70.0% | |
| !! | GAGACGGGAGGGCTTTGGGC+GGG | - | chr1.4:86020385-86020404 | None:intergenic | 70.0% |
| ATCTACCGCCCGGCGACCCC+GGG | + | chr1.4:86017510-86017529 | MS.gene029336:intron | 75.0% | |
| CACCCCCTGGACCAGGGTCC+TGG | + | chr1.4:86018313-86018332 | MS.gene029336:intron | 75.0% | |
| CATCTACCGCCCGGCGACCC+CGG | + | chr1.4:86017509-86017528 | MS.gene029336:intron | 75.0% | |
| TTGAGCCCGGGCGAGTGCCC+GGG | - | chr1.4:86017530-86017549 | None:intergenic | 75.0% | |
| ! | TGGGCCACAGTGGCGGAGCC+AGG | - | chr1.4:86018659-86018678 | None:intergenic | 75.0% |
| ! | TGAGCCCGGGCGAGTGCCCG+GGG | - | chr1.4:86017529-86017548 | None:intergenic | 80.0% |
| ! | GAGTGCCCGGGGTCGCCGGG+CGG | - | chr1.4:86017518-86017537 | None:intergenic | 85.0% |
| ! | GCGACCCCGGGCACTCGCCC+GGG | + | chr1.4:86017522-86017541 | MS.gene029336:intron | 85.0% |
| ! | GGCGACCCCGGGCACTCGCC+CGG | + | chr1.4:86017521-86017540 | MS.gene029336:intron | 85.0% |
| ! | GGCGAGTGCCCGGGGTCGCC+GGG | - | chr1.4:86017521-86017540 | None:intergenic | 85.0% |
| ! | GGGCGAGTGCCCGGGGTCGC+CGG | - | chr1.4:86017522-86017541 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 86017112 | 86021608 | 86017112 | ID=MS.gene029336 |
| chr1.4 | mRNA | 86017112 | 86021608 | 86017112 | ID=MS.gene029336.t1;Parent=MS.gene029336 |
| chr1.4 | exon | 86017112 | 86017301 | 86017112 | ID=MS.gene029336.t1.exon1;Parent=MS.gene029336.t1 |
| chr1.4 | CDS | 86017112 | 86017301 | 86017112 | ID=cds.MS.gene029336.t1;Parent=MS.gene029336.t1 |
| chr1.4 | exon | 86018852 | 86019050 | 86018852 | ID=MS.gene029336.t1.exon2;Parent=MS.gene029336.t1 |
| chr1.4 | CDS | 86018852 | 86019050 | 86018852 | ID=cds.MS.gene029336.t1;Parent=MS.gene029336.t1 |
| chr1.4 | exon | 86019133 | 86019253 | 86019133 | ID=MS.gene029336.t1.exon3;Parent=MS.gene029336.t1 |
| chr1.4 | CDS | 86019133 | 86019253 | 86019133 | ID=cds.MS.gene029336.t1;Parent=MS.gene029336.t1 |
| chr1.4 | exon | 86021317 | 86021379 | 86021317 | ID=MS.gene029336.t1.exon4;Parent=MS.gene029336.t1 |
| chr1.4 | CDS | 86021317 | 86021379 | 86021317 | ID=cds.MS.gene029336.t1;Parent=MS.gene029336.t1 |
| chr1.4 | exon | 86021465 | 86021608 | 86021465 | ID=MS.gene029336.t1.exon5;Parent=MS.gene029336.t1 |
| chr1.4 | CDS | 86021465 | 86021608 | 86021465 | ID=cds.MS.gene029336.t1;Parent=MS.gene029336.t1 |
| Gene Sequence |
| Protein sequence |
