Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67432.t1 | XP_003600969.1 | 99.4 | 340 | 2 | 0 | 1 | 340 | 1 | 340 | 1.10E-175 | 625.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67432.t1 | Q9SIZ2 | 82.0 | 339 | 60 | 1 | 3 | 340 | 6 | 344 | 2.1e-148 | 526.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67432.t1 | G7J2B5 | 99.4 | 340 | 2 | 0 | 1 | 340 | 1 | 340 | 7.7e-176 | 625.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene67432 | MS.gene018560 | PPI |
| MS.gene67432 | MS.gene63721 | PPI |
| MS.gene67432 | MS.gene43604 | PPI |
| MS.gene066163 | MS.gene67432 | PPI |
| MS.gene67432 | MS.gene09852 | PPI |
| MS.gene040581 | MS.gene67432 | PPI |
| MS.gene67432 | MS.gene002676 | PPI |
| MS.gene67432 | MS.gene05792 | PPI |
| MS.gene070896 | MS.gene67432 | PPI |
| MS.gene67432 | MS.gene64519 | PPI |
| MS.gene67432 | MS.gene004357 | PPI |
| MS.gene67432 | MS.gene069130 | PPI |
| MS.gene67432 | MS.gene027802 | PPI |
| MS.gene67432 | MS.gene068593 | PPI |
| MS.gene67432 | MS.gene061898 | PPI |
| MS.gene67432 | MS.gene063366 | PPI |
| MS.gene67432 | MS.gene060216 | PPI |
| MS.gene67432 | MS.gene43614 | PPI |
| MS.gene67432 | MS.gene002675 | PPI |
| MS.gene05791 | MS.gene67432 | PPI |
| MS.gene67432 | MS.gene039110 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67432.t1 | MTR_3g071560 | 99.412 | 340 | 2 | 0 | 1 | 340 | 1 | 340 | 0.0 | 693 |
| MS.gene67432.t1 | MTR_3g071550 | 90.294 | 340 | 33 | 0 | 1 | 340 | 1 | 340 | 0.0 | 577 |
| MS.gene67432.t1 | MTR_3g071540 | 81.471 | 340 | 61 | 1 | 1 | 340 | 1 | 338 | 0.0 | 544 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67432.t1 | AT2G40290 | 82.059 | 340 | 60 | 1 | 2 | 340 | 5 | 344 | 0.0 | 536 |
| MS.gene67432.t1 | AT5G05470 | 77.059 | 340 | 77 | 1 | 2 | 340 | 5 | 344 | 0.0 | 504 |
| MS.gene67432.t1 | AT2G40290 | 89.593 | 221 | 23 | 0 | 2 | 222 | 5 | 225 | 9.67e-140 | 396 |
| MS.gene67432.t1 | AT2G40290 | 89.593 | 221 | 23 | 0 | 2 | 222 | 5 | 225 | 9.67e-140 | 396 |
Find 85 sgRNAs with CRISPR-Local
Find 280 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTGCAATGGCTCCGAATT+TGG | 0.156697 | 3.1:-58504911 | None:intergenic |
| AACCTTGAACCTTGATTTAG+AGG | 0.251703 | 3.1:-58504551 | MS.gene67432:intron |
| TGATGGAGTTCTCCACATTA+AGG | 0.318361 | 3.1:-58503494 | MS.gene67432:intron |
| GCAGGCATTCAAAAGGGTTT+TGG | 0.328498 | 3.1:-58503710 | MS.gene67432:intron |
| TTGACAGGAGCAAGGAATAT+TGG | 0.344432 | 3.1:-58501576 | MS.gene67432:intron |
| TGGCCTTTGTATCGCAAATA+TGG | 0.347714 | 3.1:-58504421 | MS.gene67432:CDS |
| ATCACCGCCATGTCCACTTC+TGG | 0.348867 | 3.1:+58504862 | None:intergenic |
| ATGGCGACACTCACCACTTT+GGG | 0.382991 | 3.1:+58501479 | None:intergenic |
| TGGAATGGGCGAGGTTGATC+TGG | 0.384088 | 3.1:-58500905 | MS.gene67432:CDS |
| CGCCCTGAGTTTCAATGGCT+GGG | 0.393775 | 3.1:+58503543 | None:intergenic |
| TTAGTCACTTCTTGCCCATC+AGG | 0.406251 | 3.1:+58503634 | None:intergenic |
| ATCTTTATGTTCACATTGGA+TGG | 0.414003 | 3.1:-58504441 | MS.gene67432:CDS |
| ATGCGGAAGGCTGAAGCTGC+TGG | 0.416771 | 3.1:-58503361 | MS.gene67432:CDS |
| TACATGCGACATTCCAAATT+CGG | 0.416982 | 3.1:+58504898 | None:intergenic |
| TACCTCTAAATCAAGGTTCA+AGG | 0.430422 | 3.1:+58504549 | None:intergenic |
| ATCAAGGAAGTTGGTCCTGA+TGG | 0.437985 | 3.1:-58503649 | MS.gene67432:CDS |
| AGTGAAGAGGAAGAAGATAC+TGG | 0.441245 | 3.1:-58500925 | MS.gene67432:CDS |
| TCTTCGTGTTGATAAGGAAA+AGG | 0.441941 | 3.1:-58504683 | MS.gene67432:CDS |
| CGCACTCACGCGTGAAATCA+AGG | 0.444977 | 3.1:-58503665 | MS.gene67432:CDS |
| CCGCCCTGAGTTTCAATGGC+TGG | 0.445753 | 3.1:+58503542 | None:intergenic |
| CCTCGATGTTGTTGTATTCG+AGG | 0.449456 | 3.1:+58504794 | None:intergenic |
| TCACCGCCATGTCCACTTCT+GGG | 0.452930 | 3.1:+58504863 | None:intergenic |
| ATTGTGTGCAGGCATTCAAA+AGG | 0.457555 | 3.1:-58503717 | MS.gene67432:intron |
| CTTCGTGTTGATAAGGAAAA+GGG | 0.460731 | 3.1:-58504682 | MS.gene67432:CDS |
| GCAACAAGTTTAATATTCAC+AGG | 0.469029 | 3.1:+58503325 | None:intergenic |
| AGTGCGCTCAAAACAGCATC+AGG | 0.471750 | 3.1:+58503682 | None:intergenic |
| ATATCCGCCCTGAGTTTCAA+TGG | 0.472868 | 3.1:+58503538 | None:intergenic |
| GATGGCGACACTCACCACTT+TGG | 0.486619 | 3.1:+58501478 | None:intergenic |
| TCAGGGTTACCTCTAAATCA+AGG | 0.493568 | 3.1:+58504542 | None:intergenic |
| GGACATGGCGGTGATGATAC+AGG | 0.494042 | 3.1:-58504854 | MS.gene67432:CDS |
| CTCCCCAGCCATTGAAACTC+AGG | 0.497646 | 3.1:-58503546 | MS.gene67432:CDS |
| GATGGTTCTTCGTGTTGATA+AGG | 0.504546 | 3.1:-58504689 | MS.gene67432:CDS |
| GGACAATGGTAATGCGATAA+CGG | 0.523163 | 3.1:-58500884 | MS.gene67432:CDS |
| TTCACTTCTTCAGATACAGC+AGG | 0.523729 | 3.1:+58503604 | None:intergenic |
| TGCTGTATCTGAAGAAGTGA+AGG | 0.526949 | 3.1:-58503602 | MS.gene67432:CDS |
| TAGGATCTTTATGTTCACAT+TGG | 0.529676 | 3.1:-58504445 | MS.gene67432:CDS |
| TTGTGTGCAGGCATTCAAAA+GGG | 0.530778 | 3.1:-58503716 | MS.gene67432:intron |
| GAGGAAGAAGATACTGGAAT+GGG | 0.536370 | 3.1:-58500919 | MS.gene67432:CDS |
| GGTTCAAGGTTTCAGCAACA+TGG | 0.539313 | 3.1:+58504563 | None:intergenic |
| TTTGCAGGAGGCAATGCGGA+AGG | 0.543430 | 3.1:-58503374 | MS.gene67432:intron |
| TCAAGGAAGTTGGTCCTGAT+GGG | 0.550624 | 3.1:-58503648 | MS.gene67432:CDS |
| GAGTGGTAAGCACATAAAGC+GGG | 0.550723 | 3.1:+58503299 | None:intergenic |
| TAGTGTTAGCAGTCTCATCA+AGG | 0.550744 | 3.1:-58504731 | MS.gene67432:CDS |
| TGATGGGCAAGAAGTGACTA+AGG | 0.551186 | 3.1:-58503632 | MS.gene67432:CDS |
| GGTCAAGAACATCGCAGACA+TGG | 0.553038 | 3.1:-58504833 | MS.gene67432:CDS |
| TGGTCGAATCGAACCTGTGA+TGG | 0.553630 | 3.1:-58504707 | MS.gene67432:CDS |
| GAATGCCATCGCTTGTTGCA+TGG | 0.556324 | 3.1:-58501546 | MS.gene67432:CDS |
| ATATTCAAGCTTGTGAAGAA+AGG | 0.557728 | 3.1:-58504621 | MS.gene67432:CDS |
| AGAGGAAGAAGATACTGGAA+TGG | 0.562073 | 3.1:-58500920 | MS.gene67432:CDS |
| CGAAGCAAAATACCCAGAAG+TGG | 0.565713 | 3.1:-58504875 | MS.gene67432:CDS |
| GCCCTGAGTTTCAATGGCTG+GGG | 0.567805 | 3.1:+58503544 | None:intergenic |
| ACGCGTGAAATCAAGGAAGT+TGG | 0.578985 | 3.1:-58503658 | MS.gene67432:CDS |
| TACCACTCACACCCTTGACA+AGG | 0.587049 | 3.1:-58503284 | MS.gene67432:intron |
| TGATTCCATGCAACAAGCGA+TGG | 0.587557 | 3.1:+58501541 | None:intergenic |
| AACCTTGTCAAGGGTGTGAG+TGG | 0.591977 | 3.1:+58503282 | None:intergenic |
| AGAAGATACTGGAATGGGCG+AGG | 0.594274 | 3.1:-58500914 | MS.gene67432:CDS |
| GTTAGCAGTCTCATCAAGGT+TGG | 0.595645 | 3.1:-58504727 | MS.gene67432:CDS |
| TTACGATCTTGACAGGAGCA+AGG | 0.602205 | 3.1:-58501584 | MS.gene67432:intron |
| TGACCATATTTGCGATACAA+AGG | 0.605989 | 3.1:+58504418 | None:intergenic |
| ATATTGCACCAACCTTGTCA+AGG | 0.608525 | 3.1:+58503272 | None:intergenic |
| AAAATACCCAGAAGTGGACA+TGG | 0.611506 | 3.1:-58504869 | MS.gene67432:CDS |
| CAAGGGTAAACTTACTGTGA+AGG | 0.611828 | 3.1:-58501507 | MS.gene67432:CDS |
| TATTGCACCAACCTTGTCAA+GGG | 0.612175 | 3.1:+58503273 | None:intergenic |
| CAACAAGATAATGAAGAGGT+CGG | 0.615161 | 3.1:-58500961 | MS.gene67432:CDS |
| TCCCCAGCCATTGAAACTCA+GGG | 0.617631 | 3.1:-58503545 | MS.gene67432:CDS |
| TCAACACGAAGAACCATCAC+AGG | 0.622594 | 3.1:+58504694 | None:intergenic |
| GATACAACAAGATAATGAAG+AGG | 0.622833 | 3.1:-58500965 | MS.gene67432:CDS |
| CTCGAATACAACAACATCGA+GGG | 0.623019 | 3.1:-58504793 | MS.gene67432:CDS |
| GTCAAGAACATCGCAGACAT+GGG | 0.624793 | 3.1:-58504832 | MS.gene67432:CDS |
| AGGCGATGATGACAGTGAAG+AGG | 0.628516 | 3.1:-58500938 | MS.gene67432:CDS |
| AACGGTAAAAGACCTTAATG+TGG | 0.631187 | 3.1:+58503482 | None:intergenic |
| CAACAAGTTTAATATTCACA+GGG | 0.641956 | 3.1:+58503326 | None:intergenic |
| TGTGAAGGAGCAACCCAAAG+TGG | 0.645392 | 3.1:-58501492 | MS.gene67432:intron |
| GGCGAGGTTGATCTGGACAA+TGG | 0.654514 | 3.1:-58500898 | MS.gene67432:CDS |
| TGAGTGGTAAGCACATAAAG+CGG | 0.655160 | 3.1:+58503298 | None:intergenic |
| AGTGGTAAGCACATAAAGCG+GGG | 0.659710 | 3.1:+58503300 | None:intergenic |
| GGAATCAATAGAAAAGCACA+AGG | 0.675937 | 3.1:-58501525 | MS.gene67432:CDS |
| GTGGTAAGCACATAAAGCGG+GGG | 0.702146 | 3.1:+58503301 | None:intergenic |
| CAAGATAATGAAGAGGTCGG+AGG | 0.711850 | 3.1:-58500958 | MS.gene67432:CDS |
| TGGGCAAGAAGTGACTAAGG+TGG | 0.716625 | 3.1:-58503629 | MS.gene67432:CDS |
| CCTCGAATACAACAACATCG+AGG | 0.734873 | 3.1:-58504794 | MS.gene67432:CDS |
| TGGCTTTGCAGGAGGCAATG+CGG | 0.745308 | 3.1:-58503378 | MS.gene67432:intron |
| ATACCCAGAAGTGGACATGG+CGG | 0.753226 | 3.1:-58504866 | MS.gene67432:CDS |
| GAATCAATAGAAAAGCACAA+GGG | 0.753274 | 3.1:-58501524 | MS.gene67432:CDS |
| CCAGCCATTGAAACTCAGGG+CGG | 0.783148 | 3.1:-58503542 | MS.gene67432:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAAATATTAAAATTTATGTT+AGG | + | chr3.1:58502909-58502928 | None:intergenic | 10.0% |
| !!! | AACAATTTTTATTTGTAATT+AGG | - | chr3.1:58501401-58501420 | MS.gene67432:intron | 10.0% |
| !!! | GTAGTTTTAATTTATTTTTT+TGG | + | chr3.1:58502702-58502721 | None:intergenic | 10.0% |
| !! | AAACATAGACAAATAAAAAA+AGG | + | chr3.1:58504384-58504403 | None:intergenic | 15.0% |
| !! | TTATGTTAATTGAATTATTG+TGG | - | chr3.1:58501308-58501327 | MS.gene67432:intron | 15.0% |
| !!! | ACTTGATTGTTATTTTATTT+TGG | - | chr3.1:58502330-58502349 | MS.gene67432:intron | 15.0% |
| !!! | ATCATGTTTTTATAATCATT+TGG | - | chr3.1:58502385-58502404 | MS.gene67432:intron | 15.0% |
| !!! | CTTGATTGTTATTTTATTTT+GGG | - | chr3.1:58502331-58502350 | MS.gene67432:intron | 15.0% |
| !!! | TCATTTTTAATACCATTTTA+AGG | - | chr3.1:58503599-58503618 | MS.gene67432:CDS | 15.0% |
| !! | AAAAAAATAGGACTTTAATC+AGG | + | chr3.1:58501262-58501281 | None:intergenic | 20.0% |
| !! | AAAAAATAGGACTTTAATCA+GGG | + | chr3.1:58501261-58501280 | None:intergenic | 20.0% |
| !! | AATAGTAATATCTATAAGGT+CGG | + | chr3.1:58504062-58504081 | None:intergenic | 20.0% |
| !! | AATTACTTTCAATAGAAGAA+TGG | + | chr3.1:58504168-58504187 | None:intergenic | 20.0% |
| !! | ACAATAAAGTCTATGATATA+GGG | + | chr3.1:58502051-58502070 | None:intergenic | 20.0% |
| !! | CAAAAACTAACTACTTATTT+CGG | + | chr3.1:58504532-58504551 | None:intergenic | 20.0% |
| !! | CAACAATAGTAATATCTATA+AGG | + | chr3.1:58504066-58504085 | None:intergenic | 20.0% |
| !! | CTTATAGATATTACTATTGT+TGG | - | chr3.1:58504064-58504083 | MS.gene67432:intron | 20.0% |
| !! | TTCTATAAGCTAGTAAAAAT+AGG | - | chr3.1:58501734-58501753 | MS.gene67432:intron | 20.0% |
| !! | TTTAAAAGTTAAGTACCTAA+AGG | - | chr3.1:58503815-58503834 | MS.gene67432:intron | 20.0% |
| !! | TTTCAATATAACACTTTACA+GGG | - | chr3.1:58504106-58504125 | MS.gene67432:intron | 20.0% |
| !!! | AAAACATGGATTTTTTTTAG+GGG | - | chr3.1:58502835-58502854 | MS.gene67432:intron | 20.0% |
| !!! | AAATAAGTAGTTAGTTTTTG+AGG | - | chr3.1:58504532-58504551 | MS.gene67432:intron | 20.0% |
| !!! | AAATCTAAAGCGTAATTATA+GGG | + | chr3.1:58504559-58504578 | None:intergenic | 20.0% |
| !!! | ACCATTTTAAGGTTTATATT+GGG | - | chr3.1:58503610-58503629 | MS.gene67432:CDS | 20.0% |
| !!! | ATGAAATGTTTTCAATTTGA+TGG | - | chr3.1:58502272-58502291 | MS.gene67432:intron | 20.0% |
| !!! | CAAAACATGGATTTTTTTTA+GGG | - | chr3.1:58502834-58502853 | MS.gene67432:intron | 20.0% |
| !!! | CTTTTCAATTAACTTTACAT+GGG | - | chr3.1:58501652-58501671 | MS.gene67432:intron | 20.0% |
| !!! | GTTATTTTATTTTGGGTTAT+TGG | - | chr3.1:58502338-58502357 | MS.gene67432:intron | 20.0% |
| !!! | TAAATCTAAAGCGTAATTAT+AGG | + | chr3.1:58504560-58504579 | None:intergenic | 20.0% |
| !!! | TAATTTTACAACACATGTTT+AGG | + | chr3.1:58503907-58503926 | None:intergenic | 20.0% |
| !!! | TACCATTTTAAGGTTTATAT+TGG | - | chr3.1:58503609-58503628 | MS.gene67432:CDS | 20.0% |
| !!! | TCAAAACATGGATTTTTTTT+AGG | - | chr3.1:58502833-58502852 | MS.gene67432:intron | 20.0% |
| !!! | TCTTTTCAATTAACTTTACA+TGG | - | chr3.1:58501651-58501670 | MS.gene67432:intron | 20.0% |
| !!! | TGTAAAAGAATTTAAAGTCA+AGG | - | chr3.1:58504584-58504603 | MS.gene67432:CDS | 20.0% |
| !!! | TTTATTTTTTTGGTGACAAA+CGG | + | chr3.1:58502692-58502711 | None:intergenic | 20.0% |
| !!! | TTTTCAATATAACACTTTAC+AGG | - | chr3.1:58504105-58504124 | MS.gene67432:intron | 20.0% |
| !!! | TTTTTTTGTTAATGGTGTTT+TGG | - | chr3.1:58501285-58501304 | MS.gene67432:intron | 20.0% |
| ! | AAAAATTATTTCCAGGAGAT+AGG | - | chr3.1:58503482-58503501 | MS.gene67432:intron | 25.0% |
| ! | AAATTTGAAAAGATTAACCC+TGG | - | chr3.1:58503636-58503655 | MS.gene67432:CDS | 25.0% |
| ! | AATTTGAAAAGATTAACCCT+GGG | - | chr3.1:58503637-58503656 | MS.gene67432:CDS | 25.0% |
| ! | CAACAAGTTTAATATTCACA+GGG | + | chr3.1:58502460-58502479 | None:intergenic | 25.0% |
| ! | CAATAAAGTCTATGATATAG+GGG | + | chr3.1:58502050-58502069 | None:intergenic | 25.0% |
| ! | CACAATAAAGTCTATGATAT+AGG | + | chr3.1:58502052-58502071 | None:intergenic | 25.0% |
| ! | CATAGACAAATAAAAAAAGG+CGG | + | chr3.1:58504381-58504400 | None:intergenic | 25.0% |
| ! | CTTACCAAAAAATTATTTCC+AGG | - | chr3.1:58503475-58503494 | MS.gene67432:intron | 25.0% |
| ! | GACACATCAACATAAAAATA+TGG | + | chr3.1:58504710-58504729 | None:intergenic | 25.0% |
| ! | GTAGTGTTTGGTAAAATTAA+CGG | - | chr3.1:58501569-58501588 | MS.gene67432:CDS | 25.0% |
| ! | GTCTTAACATAAATCCTATT+TGG | - | chr3.1:58503781-58503800 | MS.gene67432:intron | 25.0% |
| ! | TAAAAATGAGTGATTAAAGC+AGG | + | chr3.1:58503588-58503607 | None:intergenic | 25.0% |
| ! | TAACAATCAAGTAACAGAAA+CGG | + | chr3.1:58502322-58502341 | None:intergenic | 25.0% |
| ! | TTCAATATAACACTTTACAG+GGG | - | chr3.1:58504107-58504126 | MS.gene67432:intron | 25.0% |
| !! | ATAGGTTGTGTTATTATCAT+TGG | + | chr3.1:58503031-58503050 | None:intergenic | 25.0% |
| !! | TTCTCATTTGAATCTGTTTT+AGG | + | chr3.1:58502795-58502814 | None:intergenic | 25.0% |
| !!! | ATCTCCTGGAAATAATTTTT+TGG | + | chr3.1:58503482-58503501 | None:intergenic | 25.0% |
| !!! | CCATTTTAAGGTTTATATTG+GGG | - | chr3.1:58503611-58503630 | MS.gene67432:CDS | 25.0% |
| !!! | TTATTTTGGGTTATTGGATA+TGG | - | chr3.1:58502344-58502363 | MS.gene67432:intron | 25.0% |
| !!! | TTATTTTTTTGGTGACAAAC+GGG | + | chr3.1:58502691-58502710 | None:intergenic | 25.0% |
| !!! | TTCTTGCCTTTTTTCTTTTT+AGG | + | chr3.1:58503179-58503198 | None:intergenic | 25.0% |
| AAGAAAAAATTCAAGCTGCA+AGG | - | chr3.1:58504480-58504499 | MS.gene67432:intron | 30.0% | |
| AAGAACTGAACTTATCCTTT+AGG | + | chr3.1:58503833-58503852 | None:intergenic | 30.0% | |
| AAGTATTCTGAATGCATACT+TGG | - | chr3.1:58503101-58503120 | MS.gene67432:intron | 30.0% | |
| AATCAGTCTCTGTTAACTAT+AGG | + | chr3.1:58503049-58503068 | None:intergenic | 30.0% | |
| AGAAAAAATTCAAGCTGCAA+GGG | - | chr3.1:58504481-58504500 | MS.gene67432:intron | 30.0% | |
| ATAAGCTAACTTATTGCTGA+TGG | - | chr3.1:58501522-58501541 | MS.gene67432:CDS | 30.0% | |
| ATATTCAAGCTTGTGAAGAA+AGG | - | chr3.1:58501162-58501181 | MS.gene67432:intron | 30.0% | |
| ATCTTTATGTTCACATTGGA+TGG | - | chr3.1:58501342-58501361 | MS.gene67432:intron | 30.0% | |
| ATGTTGATGTGTCTTTATTG+AGG | - | chr3.1:58504717-58504736 | MS.gene67432:CDS | 30.0% | |
| ATTTGCATTCAAAGTCCTAT+AGG | - | chr3.1:58504139-58504158 | MS.gene67432:intron | 30.0% | |
| CACACACCTAAAAAGAAAAA+AGG | - | chr3.1:58503170-58503189 | MS.gene67432:intron | 30.0% | |
| CATCTTATGTTGCAGAAATA+AGG | + | chr3.1:58501427-58501446 | None:intergenic | 30.0% | |
| CATTCAGAATACTTGTCAAT+CGG | + | chr3.1:58503095-58503114 | None:intergenic | 30.0% | |
| CCATTATATAAACAACTCCA+AGG | + | chr3.1:58504651-58504670 | None:intergenic | 30.0% | |
| CCCCAATATAAACCTTAAAA+TGG | + | chr3.1:58503614-58503633 | None:intergenic | 30.0% | |
| CCTTGGAGTTGTTTATATAA+TGG | - | chr3.1:58504648-58504667 | MS.gene67432:CDS | 30.0% | |
| CTCATTTAGTGCAAAAAGAA+CGG | + | chr3.1:58502980-58502999 | None:intergenic | 30.0% | |
| CTGATTGAATTTGTAGTGTT+TGG | - | chr3.1:58501557-58501576 | MS.gene67432:CDS | 30.0% | |
| GATACAACAAGATAATGAAG+AGG | - | chr3.1:58504818-58504837 | MS.gene67432:CDS | 30.0% | |
| GCAACAAGTTTAATATTCAC+AGG | + | chr3.1:58502461-58502480 | None:intergenic | 30.0% | |
| TAGGATCTTTATGTTCACAT+TGG | - | chr3.1:58501338-58501357 | MS.gene67432:intron | 30.0% | |
| TGCAACATAAGATGAAATGA+AGG | - | chr3.1:58501433-58501452 | MS.gene67432:intron | 30.0% | |
| TGTTATTATCATTGGCAACT+TGG | + | chr3.1:58503023-58503042 | None:intergenic | 30.0% | |
| TGTTGATGTGTCTTTATTGA+GGG | - | chr3.1:58504718-58504737 | MS.gene67432:CDS | 30.0% | |
| TTGTAAAAGATCTCTTGAAC+AGG | - | chr3.1:58501970-58501989 | MS.gene67432:intron | 30.0% | |
| ! | GAATCAATAGAAAAGCACAA+GGG | - | chr3.1:58504259-58504278 | MS.gene67432:intron | 30.0% |
| ! | TATTTTGTTACGATCTTGAC+AGG | - | chr3.1:58504192-58504211 | MS.gene67432:intron | 30.0% |
| !! | AAAGAACGGTTATTTTGTGA+AGG | + | chr3.1:58502966-58502985 | None:intergenic | 30.0% |
| !! | AATAAAAAAAGGCGGATTGA+CGG | + | chr3.1:58504373-58504392 | None:intergenic | 30.0% |
| !! | AGTTGATAAGCTAGCTTATA+GGG | - | chr3.1:58501483-58501502 | MS.gene67432:intron | 30.0% |
| !! | GCTGTTTTCATTAGTTATCT+TGG | - | chr3.1:58501897-58501916 | MS.gene67432:intron | 30.0% |
| !! | TAGTTGATAAGCTAGCTTAT+AGG | - | chr3.1:58501482-58501501 | MS.gene67432:intron | 30.0% |
| !! | TTATAATCATTTGGCTTTGC+AGG | - | chr3.1:58502394-58502413 | MS.gene67432:intron | 30.0% |
| !!! | TCAAAAGGTGAAGGTATTTT+CGG | - | chr3.1:58502874-58502893 | MS.gene67432:intron | 30.0% |
| AAAACAGCTCACTACCAAAT+AGG | + | chr3.1:58503798-58503817 | None:intergenic | 35.0% | |
| AAATTGTCCGACCAAAAAGT+CGG | - | chr3.1:58504622-58504641 | MS.gene67432:CDS | 35.0% | |
| AACCTTGAACCTTGATTTAG+AGG | - | chr3.1:58501232-58501251 | MS.gene67432:intron | 35.0% | |
| AACGGTAAAAGACCTTAATG+TGG | + | chr3.1:58502304-58502323 | None:intergenic | 35.0% | |
| AAGTATGAATGACTTACAGC+AGG | + | chr3.1:58503946-58503965 | None:intergenic | 35.0% | |
| AATATAACACTTTACAGGGG+TGG | - | chr3.1:58504110-58504129 | MS.gene67432:intron | 35.0% | |
| AGAAGATACAGGATATAGAG+AGG | + | chr3.1:58504330-58504349 | None:intergenic | 35.0% | |
| AGGCAAAATAGAAACCAAAC+AGG | - | chr3.1:58503283-58503302 | MS.gene67432:intron | 35.0% | |
| AGGTTGTGGACATATCTTAA+AGG | - | chr3.1:58501946-58501965 | MS.gene67432:intron | 35.0% | |
| ATAGAAGAATGGTTGCCTAT+AGG | + | chr3.1:58504157-58504176 | None:intergenic | 35.0% | |
| ATCGTAAGCTTGTCAAAACA+TGG | - | chr3.1:58502821-58502840 | MS.gene67432:intron | 35.0% | |
| CAACAAGATAATGAAGAGGT+CGG | - | chr3.1:58504822-58504841 | MS.gene67432:CDS | 35.0% | |
| CGCAAAAAAGAAACCAAACA+AGG | + | chr3.1:58503146-58503165 | None:intergenic | 35.0% | |
| GAAATGCTAATGCTACAGTT+GGG | + | chr3.1:58503748-58503767 | None:intergenic | 35.0% | |
| GAATTATTGTGGCTATTCGT+AGG | - | chr3.1:58501319-58501338 | MS.gene67432:intron | 35.0% | |
| GAGAAAGTGACAGTTACAAA+CGG | - | chr3.1:58501769-58501788 | MS.gene67432:intron | 35.0% | |
| GCAATGGTATTTAAGTCTTG+TGG | - | chr3.1:58503549-58503568 | MS.gene67432:CDS | 35.0% | |
| GGCAAAATAGAAACCAAACA+GGG | - | chr3.1:58503284-58503303 | MS.gene67432:intron | 35.0% | |
| GTGATTAAAGCAGGACATTA+AGG | + | chr3.1:58503579-58503598 | None:intergenic | 35.0% | |
| GTTGATGTGTCTTTATTGAG+GGG | - | chr3.1:58504719-58504738 | MS.gene67432:CDS | 35.0% | |
| TAAATACCATTGCTAGCTAG+TGG | + | chr3.1:58503542-58503561 | None:intergenic | 35.0% | |
| TACATGCGACATTCCAAATT+CGG | + | chr3.1:58500888-58500907 | None:intergenic | 35.0% | |
| TACCTCTAAATCAAGGTTCA+AGG | + | chr3.1:58501237-58501256 | None:intergenic | 35.0% | |
| TATCCTGTATCTTCTACTAG+CGG | - | chr3.1:58504335-58504354 | MS.gene67432:intron | 35.0% | |
| TATGAAAACGAGCTAGAAAC+AGG | - | chr3.1:58501926-58501945 | MS.gene67432:intron | 35.0% | |
| TCATAGACTTTATTGTGTGC+AGG | - | chr3.1:58502055-58502074 | MS.gene67432:intron | 35.0% | |
| TGAAATGCTAATGCTACAGT+TGG | + | chr3.1:58503749-58503768 | None:intergenic | 35.0% | |
| TGACCATATTTGCGATACAA+AGG | + | chr3.1:58501368-58501387 | None:intergenic | 35.0% | |
| TTAAAGCAGGACATTAAGGT+TGG | + | chr3.1:58503575-58503594 | None:intergenic | 35.0% | |
| TTGACAATGCATTGTGATTC+AGG | - | chr3.1:58504752-58504771 | MS.gene67432:CDS | 35.0% | |
| TTGATGTGTCTTTATTGAGG+GGG | - | chr3.1:58504720-58504739 | MS.gene67432:CDS | 35.0% | |
| ! | ACTAAATGAGAAGACTTGCT+TGG | - | chr3.1:58502990-58503009 | MS.gene67432:intron | 35.0% |
| ! | CAAATATGGTCATGCTTTTG+AGG | - | chr3.1:58501376-58501395 | MS.gene67432:intron | 35.0% |
| ! | CTTCGTGTTGATAAGGAAAA+GGG | - | chr3.1:58501101-58501120 | MS.gene67432:intron | 35.0% |
| ! | GATTGTCTTTTGAGCTGAAT+TGG | - | chr3.1:58502555-58502574 | MS.gene67432:intron | 35.0% |
| ! | GGAATCAATAGAAAAGCACA+AGG | - | chr3.1:58504258-58504277 | MS.gene67432:intron | 35.0% |
| ! | GTTGATAAGCTAGCTTATAG+GGG | - | chr3.1:58501484-58501503 | MS.gene67432:intron | 35.0% |
| ! | TCTTCGTGTTGATAAGGAAA+AGG | - | chr3.1:58501100-58501119 | MS.gene67432:intron | 35.0% |
| !! | ATAAAAAAAGGCGGATTGAC+GGG | + | chr3.1:58504372-58504391 | None:intergenic | 35.0% |
| !! | GGTCGTTTTGTTGTATGATT+AGG | - | chr3.1:58502638-58502657 | MS.gene67432:intron | 35.0% |
| !! | TCGGATTTGTTCTAAAAGTG+CGG | + | chr3.1:58503076-58503095 | None:intergenic | 35.0% |
| !! | TGTTTGGTTTCTATTTTGCC+TGG | + | chr3.1:58503284-58503303 | None:intergenic | 35.0% |
| AAAATACCCAGAAGTGGACA+TGG | - | chr3.1:58500914-58500933 | MS.gene67432:CDS | 40.0% | |
| AAGATTAACCCTGGGAGAAA+TGG | - | chr3.1:58503645-58503664 | MS.gene67432:CDS | 40.0% | |
| AAGTACGTGTCAAAAGGTGA+AGG | - | chr3.1:58502865-58502884 | MS.gene67432:intron | 40.0% | |
| AATCATCTCCATTTCTCCCA+GGG | + | chr3.1:58503656-58503675 | None:intergenic | 40.0% | |
| AGATGAAATGAAGGCTCTCT+TGG | - | chr3.1:58501442-58501461 | MS.gene67432:intron | 40.0% | |
| AGCAAGTTTATACCCCTCAA+AGG | + | chr3.1:58502593-58502612 | None:intergenic | 40.0% | |
| AGGATCACTGGTGTTTATAC+TGG | - | chr3.1:58501990-58502009 | MS.gene67432:intron | 40.0% | |
| ATATTGCACCAACCTTGTCA+AGG | + | chr3.1:58502514-58502533 | None:intergenic | 40.0% | |
| ATGCACATTTCACCTTTGAG+GGG | - | chr3.1:58502578-58502597 | MS.gene67432:intron | 40.0% | |
| ATTGTGTGCAGGCATTCAAA+AGG | - | chr3.1:58502066-58502085 | MS.gene67432:intron | 40.0% | |
| CAAGGGTAAACTTACTGTGA+AGG | - | chr3.1:58504276-58504295 | MS.gene67432:intron | 40.0% | |
| CTATGATATAGGGGTCTGTT+TGG | + | chr3.1:58502041-58502060 | None:intergenic | 40.0% | |
| CTCGAATACAACAACATCGA+GGG | - | chr3.1:58500990-58501009 | MS.gene67432:CDS | 40.0% | |
| GATACAGGATATAGAGAGGA+TGG | + | chr3.1:58504326-58504345 | None:intergenic | 40.0% | |
| GATGCACATTTCACCTTTGA+GGG | - | chr3.1:58502577-58502596 | MS.gene67432:intron | 40.0% | |
| GTTGGACAGCATGACATATA+TGG | - | chr3.1:58504082-58504101 | MS.gene67432:intron | 40.0% | |
| TAGTGTTAGCAGTCTCATCA+AGG | - | chr3.1:58501052-58501071 | MS.gene67432:intron | 40.0% | |
| TATTGCACCAACCTTGTCAA+GGG | + | chr3.1:58502513-58502532 | None:intergenic | 40.0% | |
| TATTTCCAGGAGATAGGAGT+AGG | - | chr3.1:58503488-58503507 | MS.gene67432:intron | 40.0% | |
| TCAGGGTTACCTCTAAATCA+AGG | + | chr3.1:58501244-58501263 | None:intergenic | 40.0% | |
| TCTTGTACTCACGTGTACTT+TGG | + | chr3.1:58503202-58503221 | None:intergenic | 40.0% | |
| TGAGTGGTAAGCACATAAAG+CGG | + | chr3.1:58502488-58502507 | None:intergenic | 40.0% | |
| TGATGGAGTTCTCCACATTA+AGG | - | chr3.1:58502289-58502308 | MS.gene67432:intron | 40.0% | |
| TGATGTGTCTTTATTGAGGG+GGG | - | chr3.1:58504721-58504740 | MS.gene67432:CDS | 40.0% | |
| TGCTGTATCTGAAGAAGTGA+AGG | - | chr3.1:58502181-58502200 | MS.gene67432:intron | 40.0% | |
| TGGCCTTTGTATCGCAAATA+TGG | - | chr3.1:58501362-58501381 | MS.gene67432:intron | 40.0% | |
| TTCACTTCTTCAGATACAGC+AGG | + | chr3.1:58502182-58502201 | None:intergenic | 40.0% | |
| TTGACAGGAGCAAGGAATAT+TGG | - | chr3.1:58504207-58504226 | MS.gene67432:intron | 40.0% | |
| TTGCTACTACTGTACGTTGT+TGG | - | chr3.1:58502608-58502627 | MS.gene67432:intron | 40.0% | |
| TTGTGTGCAGGCATTCAAAA+GGG | - | chr3.1:58502067-58502086 | MS.gene67432:intron | 40.0% | |
| ! | GAGAGAAAGTACGTGTCAAA+AGG | - | chr3.1:58502859-58502878 | MS.gene67432:intron | 40.0% |
| ! | GATGGTTCTTCGTGTTGATA+AGG | - | chr3.1:58501094-58501113 | MS.gene67432:intron | 40.0% |
| ! | GGACAATGGTAATGCGATAA+CGG | - | chr3.1:58504899-58504918 | MS.gene67432:CDS | 40.0% |
| ! | TGTGGGTCACTGTTATGTTT+TGG | + | chr3.1:58503371-58503390 | None:intergenic | 40.0% |
| !! | ATGACCAACTAGTCTTGTGT+TGG | + | chr3.1:58502940-58502959 | None:intergenic | 40.0% |
| !! | TAATCATTTGGCTTTGCAGG+AGG | - | chr3.1:58502397-58502416 | MS.gene67432:intron | 40.0% |
| !! | TGACCAACTAGTCTTGTGTT+GGG | + | chr3.1:58502939-58502958 | None:intergenic | 40.0% |
| !!! | AAGGTTACCGACTTTTTGGT+CGG | + | chr3.1:58504632-58504651 | None:intergenic | 40.0% |
| !!! | TCACTGTTATGTTTTGGCCT+GGG | + | chr3.1:58503365-58503384 | None:intergenic | 40.0% |
| AACGAGCTAGAAACAGGTTG+TGG | - | chr3.1:58501932-58501951 | MS.gene67432:intron | 45.0% | |
| ACGCGTGAAATCAAGGAAGT+TGG | - | chr3.1:58502125-58502144 | MS.gene67432:intron | 45.0% | |
| ACTGTACGTTGTTGGATCGT+TGG | - | chr3.1:58502616-58502635 | MS.gene67432:intron | 45.0% | |
| AGTGGTAAGCACATAAAGCG+GGG | + | chr3.1:58502486-58502505 | None:intergenic | 45.0% | |
| ATATCCGCCCTGAGTTTCAA+TGG | + | chr3.1:58502248-58502267 | None:intergenic | 45.0% | |
| ATTGTCCTACTCCTATCTCC+TGG | + | chr3.1:58503496-58503515 | None:intergenic | 45.0% | |
| CAAGATAATGAAGAGGTCGG+AGG | - | chr3.1:58504825-58504844 | MS.gene67432:CDS | 45.0% | |
| CAATCATCTCCATTTCTCCC+AGG | + | chr3.1:58503657-58503676 | None:intergenic | 45.0% | |
| CACTAGCTAGCAACCTTGTT+TGG | - | chr3.1:58503130-58503149 | MS.gene67432:intron | 45.0% | |
| CCAAAAAACAGCAACTCCGA+GGG | - | chr3.1:58503247-58503266 | MS.gene67432:intron | 45.0% | |
| CCTCGAATACAACAACATCG+AGG | - | chr3.1:58500989-58501008 | MS.gene67432:CDS | 45.0% | |
| CCTCGATGTTGTTGTATTCG+AGG | + | chr3.1:58500992-58501011 | None:intergenic | 45.0% | |
| CGAAGCAAAATACCCAGAAG+TGG | - | chr3.1:58500908-58500927 | MS.gene67432:CDS | 45.0% | |
| CTGTACGTTGTTGGATCGTT+GGG | - | chr3.1:58502617-58502636 | MS.gene67432:intron | 45.0% | |
| GACCAAAAAGTCGGTAACCT+TGG | - | chr3.1:58504631-58504650 | MS.gene67432:CDS | 45.0% | |
| GAGTGGTAAGCACATAAAGC+GGG | + | chr3.1:58502487-58502506 | None:intergenic | 45.0% | |
| GATCTCTTGAACAGGATCAC+TGG | - | chr3.1:58501978-58501997 | MS.gene67432:intron | 45.0% | |
| GCAAGCAGACAGATTGAGTT+TGG | - | chr3.1:58503715-58503734 | MS.gene67432:intron | 45.0% | |
| GGATGCACATTTCACCTTTG+AGG | - | chr3.1:58502576-58502595 | MS.gene67432:intron | 45.0% | |
| GGTTCAAGGTTTCAGCAACA+TGG | + | chr3.1:58501223-58501242 | None:intergenic | 45.0% | |
| GTCAAGAACATCGCAGACAT+GGG | - | chr3.1:58500951-58500970 | MS.gene67432:CDS | 45.0% | |
| GTTAGCAGTCTCATCAAGGT+TGG | - | chr3.1:58501056-58501075 | MS.gene67432:intron | 45.0% | |
| TCAACACGAAGAACCATCAC+AGG | + | chr3.1:58501092-58501111 | None:intergenic | 45.0% | |
| TCCTTGCACCCATTACAAGT+GGG | + | chr3.1:58503446-58503465 | None:intergenic | 45.0% | |
| TGATTCCATGCAACAAGCGA+TGG | + | chr3.1:58504245-58504264 | None:intergenic | 45.0% | |
| TGTCCGCTAGTAGAAGATAC+AGG | + | chr3.1:58504341-58504360 | None:intergenic | 45.0% | |
| TTACGATCTTGACAGGAGCA+AGG | - | chr3.1:58504199-58504218 | MS.gene67432:intron | 45.0% | |
| TTAGTCACTTCTTGCCCATC+AGG | + | chr3.1:58502152-58502171 | None:intergenic | 45.0% | |
| TTGCGCTACCCACTTGTAAT+GGG | - | chr3.1:58503435-58503454 | MS.gene67432:intron | 45.0% | |
| ! | AGCGCAACCTGTTTTCTCAT+GGG | + | chr3.1:58503422-58503441 | None:intergenic | 45.0% |
| ! | ATCAAGGAAGTTGGTCCTGA+TGG | - | chr3.1:58502134-58502153 | MS.gene67432:intron | 45.0% |
| ! | CTATTTTGCCTGGTTGCTGA+CGG | + | chr3.1:58503274-58503293 | None:intergenic | 45.0% |
| ! | CTCTTGTTTGGTGGTTCTCT+CGG | + | chr3.1:58503335-58503354 | None:intergenic | 45.0% |
| ! | GCAGGCATTCAAAAGGGTTT+TGG | - | chr3.1:58502073-58502092 | MS.gene67432:intron | 45.0% |
| ! | TAGCGCAACCTGTTTTCTCA+TGG | + | chr3.1:58503423-58503442 | None:intergenic | 45.0% |
| ! | TCAAGGAAGTTGGTCCTGAT+GGG | - | chr3.1:58502135-58502154 | MS.gene67432:intron | 45.0% |
| ! | TGATGGGCAAGAAGTGACTA+AGG | - | chr3.1:58502151-58502170 | MS.gene67432:intron | 45.0% |
| !! | GACCAACTAGTCTTGTGTTG+GGG | + | chr3.1:58502938-58502957 | None:intergenic | 45.0% |
| !!! | CTCCAAGGTTACCGACTTTT+TGG | + | chr3.1:58504636-58504655 | None:intergenic | 45.0% |
| !!! | GTCACTGTTATGTTTTGGCC+TGG | + | chr3.1:58503366-58503385 | None:intergenic | 45.0% |
| !! | AAAAATAAATTAATTATTGA+AGG | + | chr3.1:58504437-58504456 | None:intergenic | 5.0% |
| !! | AAATATTAAAATTTATGTTA+GGG | + | chr3.1:58502908-58502927 | None:intergenic | 5.0% |
| !! | ACAAAAAAAAAAAAAAAAAT+AGG | + | chr3.1:58501274-58501293 | None:intergenic | 5.0% |
| !!! | TAATTAAATATATCTTTTTT+AGG | + | chr3.1:58501622-58501641 | None:intergenic | 5.0% |
| !!! | TATTTTTTTTAAATACAAAT+GGG | + | chr3.1:58502766-58502785 | None:intergenic | 5.0% |
| !!! | TTATTTTTTTTAAATACAAA+TGG | + | chr3.1:58502767-58502786 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTTTTTTTGTTAA+TGG | - | chr3.1:58501277-58501296 | MS.gene67432:intron | 5.0% |
| ACTCACACCCTTGACAAGGT+TGG | - | chr3.1:58502503-58502522 | MS.gene67432:intron | 50.0% | |
| AGGCGATGATGACAGTGAAG+AGG | - | chr3.1:58504845-58504864 | MS.gene67432:CDS | 50.0% | |
| AGTGCGCTCAAAACAGCATC+AGG | + | chr3.1:58502104-58502123 | None:intergenic | 50.0% | |
| ATACCCAGAAGTGGACATGG+CGG | - | chr3.1:58500917-58500936 | MS.gene67432:CDS | 50.0% | |
| ATCTGCGGAATTGGCATGTG+TGG | + | chr3.1:58503389-58503408 | None:intergenic | 50.0% | |
| ATGGCGACACTCACCACTTT+GGG | + | chr3.1:58504307-58504326 | None:intergenic | 50.0% | |
| CACCCCAACACAAGACTAGT+TGG | - | chr3.1:58502933-58502952 | MS.gene67432:intron | 50.0% | |
| CCAATTCCGCAGATCTCTAC+TGG | - | chr3.1:58503395-58503414 | MS.gene67432:intron | 50.0% | |
| CCACATCCACTAGCTAGCAA+TGG | - | chr3.1:58503533-58503552 | MS.gene67432:CDS | 50.0% | |
| CCAGTAGAGATCTGCGGAAT+TGG | + | chr3.1:58503398-58503417 | None:intergenic | 50.0% | |
| CGAGAGAACCACCAAACAAG+AGG | - | chr3.1:58503333-58503352 | MS.gene67432:CDS | 50.0% | |
| CTCCTTGCACCCATTACAAG+TGG | + | chr3.1:58503447-58503466 | None:intergenic | 50.0% | |
| GCCAAAAAACAGCAACTCCG+AGG | - | chr3.1:58503246-58503265 | MS.gene67432:intron | 50.0% | |
| GCTGTACTCTCAACCCTGTT+TGG | + | chr3.1:58503300-58503319 | None:intergenic | 50.0% | |
| GGTCAAGAACATCGCAGACA+TGG | - | chr3.1:58500950-58500969 | MS.gene67432:CDS | 50.0% | |
| GTGGTAAGCACATAAAGCGG+GGG | + | chr3.1:58502485-58502504 | None:intergenic | 50.0% | |
| GTTGCGCTACCCACTTGTAA+TGG | - | chr3.1:58503434-58503453 | MS.gene67432:intron | 50.0% | |
| TACCACTCACACCCTTGACA+AGG | - | chr3.1:58502499-58502518 | MS.gene67432:intron | 50.0% | |
| TACTGGCCCCATGAGAAAAC+AGG | - | chr3.1:58503412-58503431 | MS.gene67432:intron | 50.0% | |
| TCCCCAGCCATTGAAACTCA+GGG | - | chr3.1:58502238-58502257 | MS.gene67432:intron | 50.0% | |
| TCTGCGGAATTGGCATGTGT+GGG | + | chr3.1:58503388-58503407 | None:intergenic | 50.0% | |
| TGGGCAAGAAGTGACTAAGG+TGG | - | chr3.1:58502154-58502173 | MS.gene67432:intron | 50.0% | |
| TGGTCGAATCGAACCTGTGA+TGG | - | chr3.1:58501076-58501095 | MS.gene67432:intron | 50.0% | |
| TGTGAAGGAGCAACCCAAAG+TGG | - | chr3.1:58504291-58504310 | MS.gene67432:intron | 50.0% | |
| ! | AACCTTGTCAAGGGTGTGAG+TGG | + | chr3.1:58502504-58502523 | None:intergenic | 50.0% |
| ! | CCATTGCTAGCTAGTGGATG+TGG | + | chr3.1:58503536-58503555 | None:intergenic | 50.0% |
| ! | GAATGCCATCGCTTGTTGCA+TGG | - | chr3.1:58504237-58504256 | MS.gene67432:intron | 50.0% |
| ! | GCGCAACCTGTTTTCTCATG+GGG | + | chr3.1:58503421-58503440 | None:intergenic | 50.0% |
| ! | TTGGTGGTTCTCTCGGTACA+GGG | + | chr3.1:58503328-58503347 | None:intergenic | 50.0% |
| ! | TTTGGTGGTTCTCTCGGTAC+AGG | + | chr3.1:58503329-58503348 | None:intergenic | 50.0% |
| !! | ACCCACTTGTAATGGGTGCA+AGG | - | chr3.1:58503442-58503461 | MS.gene67432:intron | 50.0% |
| !! | GGTAATGCGATAACGGAGTG+AGG | - | chr3.1:58504906-58504925 | MS.gene67432:CDS | 50.0% |
| !! | TGTAATGGGTGCAAGGAGAC+AGG | - | chr3.1:58503449-58503468 | MS.gene67432:intron | 50.0% |
| !! | TTTTGGTGACAAACGGGCTC+AGG | + | chr3.1:58502685-58502704 | None:intergenic | 50.0% |
| !!! | CCCTCGGAGTTGCTGTTTTT+TGG | + | chr3.1:58503250-58503269 | None:intergenic | 50.0% |
| !!! | CTGTTATGTTTTGGCCTGGG+TGG | + | chr3.1:58503362-58503381 | None:intergenic | 50.0% |
| AGTGGATGTGGAGTAGCTGG+TGG | + | chr3.1:58503524-58503543 | None:intergenic | 55.0% | |
| ATCACCGCCATGTCCACTTC+TGG | + | chr3.1:58500924-58500943 | None:intergenic | 55.0% | |
| ATGGGGCCAGTAGAGATCTG+CGG | + | chr3.1:58503404-58503423 | None:intergenic | 55.0% | |
| CAAACAAGAGGCAACCACCC+AGG | - | chr3.1:58503345-58503364 | MS.gene67432:CDS | 55.0% | |
| CCAGCCATTGAAACTCAGGG+CGG | - | chr3.1:58502241-58502260 | MS.gene67432:intron | 55.0% | |
| CGCACTCACGCGTGAAATCA+AGG | - | chr3.1:58502118-58502137 | MS.gene67432:intron | 55.0% | |
| CGCCCTGAGTTTCAATGGCT+GGG | + | chr3.1:58502243-58502262 | None:intergenic | 55.0% | |
| CTCCCCAGCCATTGAAACTC+AGG | - | chr3.1:58502237-58502256 | MS.gene67432:intron | 55.0% | |
| CTGGGTGGTTGCCTCTTGTT+TGG | + | chr3.1:58503347-58503366 | None:intergenic | 55.0% | |
| GATGGCGACACTCACCACTT+TGG | + | chr3.1:58504308-58504327 | None:intergenic | 55.0% | |
| GCCCTGAGTTTCAATGGCTG+GGG | + | chr3.1:58502242-58502261 | None:intergenic | 55.0% | |
| GGACATGGCGGTGATGATAC+AGG | - | chr3.1:58500929-58500948 | MS.gene67432:CDS | 55.0% | |
| TCACCGCCATGTCCACTTCT+GGG | + | chr3.1:58500923-58500942 | None:intergenic | 55.0% | |
| TTTGCAGGAGGCAATGCGGA+AGG | - | chr3.1:58502409-58502428 | MS.gene67432:intron | 55.0% | |
| ! | ATGTGGAGTAGCTGGTGGAC+AGG | + | chr3.1:58503519-58503538 | None:intergenic | 55.0% |
| ! | GCTAGTGGATGTGGAGTAGC+TGG | + | chr3.1:58503527-58503546 | None:intergenic | 55.0% |
| ! | GGCGAGGTTGATCTGGACAA+TGG | - | chr3.1:58504885-58504904 | MS.gene67432:CDS | 55.0% |
| ! | GGTGGTTGCCTCTTGTTTGG+TGG | + | chr3.1:58503344-58503363 | None:intergenic | 55.0% |
| ! | GTGACAAACGGGCTCAGGAT+AGG | + | chr3.1:58502680-58502699 | None:intergenic | 55.0% |
| ! | TGGCTTTGCAGGAGGCAATG+CGG | - | chr3.1:58502405-58502424 | MS.gene67432:intron | 55.0% |
| ATGCGGAAGGCTGAAGCTGC+TGG | - | chr3.1:58502422-58502441 | MS.gene67432:intron | 60.0% | |
| CCGCCCTGAGTTTCAATGGC+TGG | + | chr3.1:58502244-58502263 | None:intergenic | 60.0% | |
| CCTGGTTGCTGACGGTCCCT+CGG | + | chr3.1:58503266-58503285 | None:intergenic | 65.0% | |
| CCGAGGGACCGTCAGCAACC+AGG | - | chr3.1:58503263-58503282 | MS.gene67432:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 58500879 | 58504926 | 58500879 | ID=MS.gene67432 |
| chr3.1 | mRNA | 58500879 | 58504926 | 58500879 | ID=MS.gene67432.t1;Parent=MS.gene67432 |
| chr3.1 | exon | 58504552 | 58504926 | 58504552 | ID=MS.gene67432.t1.exon1;Parent=MS.gene67432.t1 |
| chr3.1 | CDS | 58504552 | 58504926 | 58504552 | ID=cds.MS.gene67432.t1;Parent=MS.gene67432.t1 |
| chr3.1 | exon | 58504408 | 58504464 | 58504408 | ID=MS.gene67432.t1.exon2;Parent=MS.gene67432.t1 |
| chr3.1 | CDS | 58504408 | 58504464 | 58504408 | ID=cds.MS.gene67432.t1;Parent=MS.gene67432.t1 |
| chr3.1 | exon | 58503495 | 58503728 | 58503495 | ID=MS.gene67432.t1.exon3;Parent=MS.gene67432.t1 |
| chr3.1 | CDS | 58503495 | 58503728 | 58503495 | ID=cds.MS.gene67432.t1;Parent=MS.gene67432.t1 |
| chr3.1 | exon | 58503285 | 58503389 | 58503285 | ID=MS.gene67432.t1.exon4;Parent=MS.gene67432.t1 |
| chr3.1 | CDS | 58503285 | 58503389 | 58503285 | ID=cds.MS.gene67432.t1;Parent=MS.gene67432.t1 |
| chr3.1 | exon | 58501493 | 58501591 | 58501493 | ID=MS.gene67432.t1.exon5;Parent=MS.gene67432.t1 |
| chr3.1 | CDS | 58501493 | 58501591 | 58501493 | ID=cds.MS.gene67432.t1;Parent=MS.gene67432.t1 |
| chr3.1 | exon | 58500879 | 58501031 | 58500879 | ID=MS.gene67432.t1.exon6;Parent=MS.gene67432.t1 |
| chr3.1 | CDS | 58500879 | 58501031 | 58500879 | ID=cds.MS.gene67432.t1;Parent=MS.gene67432.t1 |
| Gene Sequence |
| Protein sequence |
