Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67548.t1 | XP_003612312.1 | 93.8 | 835 | 51 | 1 | 1 | 834 | 1 | 835 | 0.00E+00 | 1555 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67548.t1 | C0SQ89 | 56.0 | 775 | 308 | 10 | 57 | 815 | 122 | 879 | 7.1e-246 | 851.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67548.t1 | G7K003 | 93.8 | 835 | 51 | 1 | 1 | 834 | 1 | 835 | 0.0e+00 | 1555.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049622 | MS.gene67548 | 0.807592 | 4.69E-50 | -1.69E-46 |
| MS.gene049989 | MS.gene67548 | 0.835165 | 1.97E-56 | -1.69E-46 |
| MS.gene050297 | MS.gene67548 | 0.806115 | 9.62E-50 | -1.69E-46 |
| MS.gene051263 | MS.gene67548 | 0.809063 | 2.28E-50 | -1.69E-46 |
| MS.gene051629 | MS.gene67548 | 0.807913 | 4.01E-50 | -1.69E-46 |
| MS.gene051816 | MS.gene67548 | 0.822954 | 1.80E-53 | -1.69E-46 |
| MS.gene052367 | MS.gene67548 | 0.816032 | 6.81E-52 | -1.69E-46 |
| MS.gene053416 | MS.gene67548 | 0.823475 | 1.36E-53 | -1.69E-46 |
| MS.gene053417 | MS.gene67548 | 0.825298 | 5.06E-54 | -1.69E-46 |
| MS.gene055308 | MS.gene67548 | 0.810175 | 1.31E-50 | -1.69E-46 |
| MS.gene055957 | MS.gene67548 | 0.846974 | 1.55E-59 | -1.69E-46 |
| MS.gene056041 | MS.gene67548 | 0.842822 | 2.04E-58 | -1.69E-46 |
| MS.gene056042 | MS.gene67548 | 0.809005 | 2.34E-50 | -1.69E-46 |
| MS.gene056335 | MS.gene67548 | 0.800636 | 1.31E-48 | -1.69E-46 |
| MS.gene05640 | MS.gene67548 | 0.824498 | 7.81E-54 | -1.69E-46 |
| MS.gene057458 | MS.gene67548 | 0.829504 | 4.96E-55 | -1.69E-46 |
| MS.gene059300 | MS.gene67548 | 0.815801 | 7.68E-52 | -1.69E-46 |
| MS.gene059553 | MS.gene67548 | 0.825957 | 3.53E-54 | -1.69E-46 |
| MS.gene060473 | MS.gene67548 | 0.824164 | 9.36E-54 | -1.69E-46 |
| MS.gene060565 | MS.gene67548 | 0.827827 | 1.26E-54 | -1.69E-46 |
| MS.gene06093 | MS.gene67548 | 0.829136 | 6.09E-55 | -1.69E-46 |
| MS.gene061099 | MS.gene67548 | 0.811574 | 6.54E-51 | -1.69E-46 |
| MS.gene061260 | MS.gene67548 | 0.818527 | 1.87E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67548.t1 | MTR_5g023660 | 96.168 | 835 | 31 | 1 | 1 | 834 | 1 | 835 | 0.0 | 1655 |
| MS.gene67548.t1 | MTR_5g023660 | 95.808 | 835 | 29 | 2 | 1 | 834 | 1 | 830 | 0.0 | 1643 |
| MS.gene67548.t1 | MTR_6g084890 | 95.449 | 835 | 38 | 0 | 1 | 835 | 1 | 835 | 0.0 | 1624 |
| MS.gene67548.t1 | MTR_7g007090 | 90.180 | 835 | 74 | 2 | 1 | 835 | 1 | 827 | 0.0 | 1513 |
| MS.gene67548.t1 | MTR_4g017850 | 79.787 | 846 | 157 | 5 | 1 | 835 | 1 | 843 | 0.0 | 1374 |
| MS.gene67548.t1 | MTR_6g037900 | 71.727 | 863 | 196 | 8 | 1 | 835 | 1 | 843 | 0.0 | 1230 |
| MS.gene67548.t1 | MTR_6g088715 | 53.357 | 834 | 362 | 10 | 9 | 819 | 88 | 917 | 0.0 | 884 |
| MS.gene67548.t1 | MTR_8g071100 | 50.644 | 776 | 356 | 10 | 60 | 818 | 194 | 959 | 0.0 | 790 |
| MS.gene67548.t1 | MTR_5g066780 | 47.607 | 773 | 278 | 13 | 60 | 819 | 123 | 781 | 0.0 | 663 |
| MS.gene67548.t1 | MTR_5g066830 | 64.740 | 173 | 61 | 0 | 647 | 819 | 1 | 173 | 4.57e-71 | 232 |
| MS.gene67548.t1 | MTR_8g062550 | 37.745 | 408 | 183 | 13 | 121 | 524 | 42 | 382 | 8.65e-65 | 223 |
| MS.gene67548.t1 | MTR_2g046020 | 34.316 | 373 | 207 | 8 | 437 | 802 | 1232 | 1573 | 7.79e-57 | 213 |
| MS.gene67548.t1 | MTR_6g065580 | 34.316 | 373 | 207 | 8 | 437 | 802 | 1206 | 1547 | 1.21e-55 | 209 |
| MS.gene67548.t1 | MTR_0331s0010 | 81.818 | 66 | 11 | 1 | 569 | 633 | 28 | 93 | 2.93e-26 | 104 |
| MS.gene67548.t1 | MTR_7g047650 | 39.048 | 105 | 49 | 3 | 262 | 366 | 40 | 129 | 1.77e-13 | 68.9 |
| MS.gene67548.t1 | MTR_2g054840 | 36.364 | 88 | 56 | 0 | 552 | 639 | 15 | 102 | 5.05e-13 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67548.t1 | AT1G69770 | 52.801 | 839 | 357 | 12 | 1 | 815 | 1 | 824 | 0.0 | 834 |
| MS.gene67548.t1 | AT1G80740 | 51.553 | 805 | 340 | 9 | 45 | 822 | 4 | 785 | 0.0 | 825 |
| MS.gene67548.t1 | AT4G19020 | 49.631 | 814 | 370 | 7 | 17 | 818 | 496 | 1281 | 0.0 | 806 |
| MS.gene67548.t1 | AT4G19020 | 49.631 | 814 | 370 | 7 | 17 | 818 | 448 | 1233 | 0.0 | 805 |
| MS.gene67548.t1 | AT4G14140 | 36.022 | 372 | 196 | 10 | 433 | 795 | 1164 | 1502 | 5.51e-58 | 216 |
| MS.gene67548.t1 | AT4G14140 | 36.022 | 372 | 196 | 10 | 433 | 795 | 1164 | 1502 | 5.51e-58 | 216 |
| MS.gene67548.t1 | AT4G14140 | 36.022 | 372 | 196 | 10 | 433 | 795 | 1190 | 1528 | 9.37e-58 | 216 |
| MS.gene67548.t1 | AT4G08990 | 35.753 | 372 | 197 | 10 | 433 | 795 | 1157 | 1495 | 2.19e-56 | 211 |
| MS.gene67548.t1 | AT4G13610 | 33.952 | 377 | 201 | 8 | 433 | 803 | 1066 | 1400 | 3.27e-54 | 204 |
| MS.gene67548.t1 | AT5G49160 | 33.509 | 379 | 212 | 11 | 433 | 803 | 1091 | 1437 | 2.77e-52 | 199 |
| MS.gene67548.t1 | AT5G49160 | 33.509 | 379 | 212 | 11 | 433 | 803 | 1179 | 1525 | 2.99e-52 | 199 |
Find 184 sgRNAs with CRISPR-Local
Find 383 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAATTTGCTGGTGGCTTTC+TGG | -0.003628 | 5.4:-15180709 | MS.gene67548:CDS |
| TGCTTTGGAGCGTCTATTTC+TGG | 0.092776 | 5.4:-15181915 | MS.gene67548:CDS |
| ACTTTACTGGATTTGTATTC+TGG | 0.102309 | 5.4:-15181963 | MS.gene67548:CDS |
| CCAAAACATACGTGTGTTTC+TGG | 0.107116 | 5.4:+15181720 | None:intergenic |
| GAAGCTTGAGTGGACTTTAC+TGG | 0.259994 | 5.4:-15181976 | MS.gene67548:CDS |
| AGATATGATACCTTCTTCTT+TGG | 0.269464 | 5.4:+15179529 | None:intergenic |
| AAATTTGCTGGTGGCTTTCT+GGG | 0.282458 | 5.4:-15180708 | MS.gene67548:CDS |
| TAGACAACTTGGGTACTTAA+AGG | 0.288833 | 5.4:+15178068 | None:intergenic |
| CATTCGAGCTTGATAATTCA+TGG | 0.289914 | 5.4:+15180659 | None:intergenic |
| TCTTCTTCAACGGGATTAAC+AGG | 0.302292 | 5.4:+15183867 | None:intergenic |
| ATAGAAAACTCACTCGTTCT+TGG | 0.312461 | 5.4:+15183716 | None:intergenic |
| AGGAACGACGTCGTCTTGTT+TGG | 0.324105 | 5.4:+15183923 | None:intergenic |
| CCAGACTGCTATAAGCTTTG+TGG | 0.329709 | 5.4:-15178713 | MS.gene67548:CDS |
| TTCAATATTTACAGTGTCTT+CGG | 0.334695 | 5.4:+15182597 | None:intergenic |
| ATCCTTTAGATTGTTTAGTT+AGG | 0.347736 | 5.4:-15182431 | MS.gene67548:CDS |
| CTAAGAACTCTGTCTTGTTC+TGG | 0.348365 | 5.4:+15178767 | None:intergenic |
| CATATGGCCTTCCTCAATTT+CGG | 0.349601 | 5.4:-15180617 | MS.gene67548:CDS |
| CCACCTTGTCAAGGTGTTAG+TGG | 0.350266 | 5.4:-15180861 | MS.gene67548:CDS |
| TGAGCTTCATCGACCGGAAT+AGG | 0.351563 | 5.4:+15183762 | None:intergenic |
| ATGTCCACTGGCCTTTGCTT+TGG | 0.354478 | 5.4:-15181930 | MS.gene67548:CDS |
| ACAAATGTCATTGCATAATC+TGG | 0.361080 | 5.4:+15179246 | None:intergenic |
| TGAAGTCTCGCTTTCCATTA+TGG | 0.361861 | 5.4:+15182085 | None:intergenic |
| CTTTACTGGATTTGTATTCT+GGG | 0.362248 | 5.4:-15181962 | MS.gene67548:CDS |
| TTAGTGGTTTCAATCGCTTC+AGG | 0.364770 | 5.4:-15180845 | MS.gene67548:CDS |
| ATCCTCAAGGTTTAATGCCT+TGG | 0.368420 | 5.4:+15180229 | None:intergenic |
| GTTCCTGTGGCCCTTGCCCT+TGG | 0.369274 | 5.4:-15178150 | MS.gene67548:CDS |
| GGGCTCCCATGTATCATAAC+TGG | 0.370498 | 5.4:+15181240 | None:intergenic |
| TAATACAGCACCTGCCATAA+TGG | 0.377170 | 5.4:-15182099 | MS.gene67548:intron |
| TTCGCTTTCTTTCTTCTAGA+AGG | 0.383626 | 5.4:+15183828 | None:intergenic |
| TTCCTAACTAAACAATCTAA+AGG | 0.391710 | 5.4:+15182429 | None:intergenic |
| AACACATACCTCTGTTTGAC+AGG | 0.396020 | 5.4:+15178689 | None:intergenic |
| GAAAGAGTGCATCTAAAATC+TGG | 0.397497 | 5.4:-15179361 | MS.gene67548:CDS |
| AGACAACTTGGGTACTTAAA+GGG | 0.412259 | 5.4:+15178069 | None:intergenic |
| TACTGTGAAGCTAAGGTTGA+TGG | 0.414096 | 5.4:-15183572 | MS.gene67548:CDS |
| TCTAAAATCTGGAAAGCCTT+TGG | 0.417831 | 5.4:-15179350 | MS.gene67548:intron |
| TCAACACTTTCAAGTGAATC+CGG | 0.418845 | 5.4:-15182065 | MS.gene67548:CDS |
| AAGGGCCGAGCCTCATAATC+AGG | 0.420289 | 5.4:-15179066 | MS.gene67548:intron |
| TTAGATTCTTTAATTTGAGT+TGG | 0.421419 | 5.4:+15181999 | None:intergenic |
| ATGTTAGCAAAAGTTAAATA+TGG | 0.423411 | 5.4:+15182222 | None:intergenic |
| CATCAACTACATCTAAAGAA+TGG | 0.427040 | 5.4:+15178043 | None:intergenic |
| ATCCGACTCTGAGGTATTTG+AGG | 0.427400 | 5.4:-15181437 | MS.gene67548:CDS |
| ATGATGGCTGCAGGGTCATA+TGG | 0.428980 | 5.4:-15180633 | MS.gene67548:CDS |
| CTTGCCCTTGGATACACATT+CGG | 0.430430 | 5.4:-15178138 | MS.gene67548:CDS |
| GTAAAATATTGTTCTTCCTC+AGG | 0.432366 | 5.4:+15182640 | None:intergenic |
| TTCTTATCTTTCAGGTGCAT+TGG | 0.437517 | 5.4:-15181276 | MS.gene67548:intron |
| TATCTTTCAGGTGCATTGGA+AGG | 0.438453 | 5.4:-15181272 | MS.gene67548:intron |
| TAATCCCGTTGAAGAAGAAC+TGG | 0.438728 | 5.4:-15183862 | MS.gene67548:CDS |
| GAAACCAGTTCTTCTTCAAC+GGG | 0.439261 | 5.4:+15183858 | None:intergenic |
| GCTGAACACAACAGGCCATT+TGG | 0.441659 | 5.4:-15179128 | MS.gene67548:intron |
| TATCCAAGGGCAAGGGCCAC+AGG | 0.450914 | 5.4:+15178147 | None:intergenic |
| AAAGAATGGGCTAGACAACT+TGG | 0.454064 | 5.4:+15178057 | None:intergenic |
| ATCAACTACATCTAAAGAAT+GGG | 0.455075 | 5.4:+15178044 | None:intergenic |
| CTGGATTTGTATTCTGGGTG+TGG | 0.458568 | 5.4:-15181957 | MS.gene67548:CDS |
| ACAGATTCTGATTTGAATGC+TGG | 0.467576 | 5.4:-15181505 | MS.gene67548:CDS |
| TAAAGAAAACAAAGTGGAAT+GGG | 0.470053 | 5.4:-15179395 | MS.gene67548:CDS |
| ACAGGCCATTTGGTCGACTT+TGG | 0.470283 | 5.4:-15179118 | MS.gene67548:intron |
| AATGTGTGTGCAGGTGATTA+AGG | 0.470442 | 5.4:-15182511 | MS.gene67548:intron |
| CGAATGGGAATGATGGCTGC+AGG | 0.476134 | 5.4:-15180642 | MS.gene67548:CDS |
| CAAACAATAACCTGATTATG+AGG | 0.477324 | 5.4:+15179056 | None:intergenic |
| CAAAACATACGTGTGTTTCT+GGG | 0.479283 | 5.4:+15181721 | None:intergenic |
| CTTCGTCGGAGAACCTATTC+CGG | 0.481206 | 5.4:-15183775 | MS.gene67548:CDS |
| CCACAAAGCTTATAGCAGTC+TGG | 0.481850 | 5.4:+15178713 | None:intergenic |
| ACGATTCCAGTTATGATACA+TGG | 0.482110 | 5.4:-15181246 | MS.gene67548:CDS |
| CGAGAGAATGCAAGGCTACA+AGG | 0.483765 | 5.4:-15178740 | MS.gene67548:CDS |
| CTTATCAGTTGCACGGACAT+TGG | 0.484986 | 5.4:+15182040 | None:intergenic |
| TCGATGAAGCTCAAAAGAAA+TGG | 0.486033 | 5.4:-15183752 | MS.gene67548:CDS |
| CTCACTCGTTCTTGGTGTAT+CGG | 0.487063 | 5.4:+15183724 | None:intergenic |
| GCCATTTGGTCGACTTTGGT+GGG | 0.487889 | 5.4:-15179114 | MS.gene67548:CDS |
| AGCGATGATGAAAGGAGCTA+TGG | 0.490074 | 5.4:-15180070 | MS.gene67548:CDS |
| TTTCTGGGGCGTTATGCTGT+GGG | 0.490661 | 5.4:-15180693 | MS.gene67548:CDS |
| TCCGTGCAACTGATAAGAAA+GGG | 0.491671 | 5.4:-15182034 | MS.gene67548:CDS |
| TTGCCACATTCCAAAGAAGA+AGG | 0.494632 | 5.4:-15179539 | MS.gene67548:intron |
| GTCTCGCTTTCCATTATGGC+AGG | 0.499382 | 5.4:+15182089 | None:intergenic |
| TTAGATGTAGTTGATGATGA+TGG | 0.499460 | 5.4:-15178036 | MS.gene67548:CDS |
| CTTTCTGGGGCGTTATGCTG+TGG | 0.501004 | 5.4:-15180694 | MS.gene67548:CDS |
| GGCCATTTGGTCGACTTTGG+TGG | 0.503320 | 5.4:-15179115 | MS.gene67548:CDS |
| ATGAATTATCAAGCTCGAAT+GGG | 0.503860 | 5.4:-15180657 | MS.gene67548:CDS |
| CTTACTTTAAAATAAAGTCC+TGG | 0.505726 | 5.4:+15181364 | None:intergenic |
| GGGTGTGGAGCTATGTCCAC+TGG | 0.507514 | 5.4:-15181942 | MS.gene67548:CDS |
| ACAACCTCATGAGTTGGTAA+TGG | 0.511864 | 5.4:+15180433 | None:intergenic |
| TTATGCTGTGGGCCGTCTAG+TGG | 0.511914 | 5.4:-15180682 | MS.gene67548:CDS |
| CATGAATTATCAAGCTCGAA+TGG | 0.511989 | 5.4:-15180658 | MS.gene67548:CDS |
| GTCCGTGCAACTGATAAGAA+AGG | 0.513074 | 5.4:-15182035 | MS.gene67548:CDS |
| CCCCTTTCTTATCAGTTGCA+CGG | 0.513311 | 5.4:+15182033 | None:intergenic |
| CACTAATGAAAATTGTCAGC+TGG | 0.514015 | 5.4:-15180252 | MS.gene67548:CDS |
| CACCACAAATAAAATCAGCT+TGG | 0.514779 | 5.4:+15180886 | None:intergenic |
| ACATTCGGTTTAGCAATTCA+AGG | 0.515197 | 5.4:-15178123 | MS.gene67548:CDS |
| GTTCTTACTTCAAACTCAGT+GGG | 0.517126 | 5.4:+15180394 | None:intergenic |
| ATCTTTCAGGTGCATTGGAA+GGG | 0.520919 | 5.4:-15181271 | MS.gene67548:intron |
| AAAACACGCATCCGAAATTG+AGG | 0.524141 | 5.4:+15180606 | None:intergenic |
| TCATCGGTATTTAATTTCAA+AGG | 0.524186 | 5.4:+15179574 | None:intergenic |
| TTCTCCATCAGAACATACTT+AGG | 0.525692 | 5.4:+15180747 | None:intergenic |
| TCCCACCAAAGTCGACCAAA+TGG | 0.528934 | 5.4:+15179113 | None:intergenic |
| TAATGCAGGTACATGCAAGT+TGG | 0.531949 | 5.4:-15178186 | MS.gene67548:intron |
| GATCATTAATTGCATCCTCA+AGG | 0.533889 | 5.4:+15180216 | None:intergenic |
| GAACTCTGTCTTGTTCTGGA+TGG | 0.534548 | 5.4:+15178771 | None:intergenic |
| TTCTGGCATTAAGCTTGTGA+CGG | 0.535368 | 5.4:-15181898 | MS.gene67548:intron |
| TGAAAATTGTCAGCTGGCCA+AGG | 0.535950 | 5.4:-15180246 | MS.gene67548:CDS |
| ATACCTTCTTCTTTGGAATG+TGG | 0.536325 | 5.4:+15179536 | None:intergenic |
| GAGTGAGGATGAAAGTTTGA+AGG | 0.536508 | 5.4:-15183606 | MS.gene67548:CDS |
| TTTAAGTCTCCTAAAAGAGT+GGG | 0.536611 | 5.4:-15181569 | MS.gene67548:CDS |
| GAAGCCTAAGTATGTTCTGA+TGG | 0.538220 | 5.4:-15180751 | MS.gene67548:CDS |
| TTAAAGAAAACAAAGTGGAA+TGG | 0.538234 | 5.4:-15179396 | MS.gene67548:CDS |
| GGATTACATTGCTACGATTG+TGG | 0.539195 | 5.4:-15182677 | MS.gene67548:CDS |
| GGCAAACTTCAGGGACCTCA+AGG | 0.539453 | 5.4:-15179428 | MS.gene67548:CDS |
| CTCGATACAACCTCATGAGT+TGG | 0.540046 | 5.4:+15180427 | None:intergenic |
| AAACTACTCTCTATCTGCTA+TGG | 0.541405 | 5.4:-15181409 | MS.gene67548:CDS |
| AGAAACCAGTTCTTCTTCAA+CGG | 0.541839 | 5.4:+15183857 | None:intergenic |
| TATATCAGATTAAAGAGAAG+TGG | 0.544554 | 5.4:-15180019 | MS.gene67548:intron |
| TGACTTGAAGAAATGGGCTG+TGG | 0.544856 | 5.4:-15181784 | MS.gene67548:intron |
| ATGCAATGACATTTGTTCGT+GGG | 0.548444 | 5.4:-15179239 | MS.gene67548:CDS |
| AGTTGCACGGACATTGGACC+CGG | 0.551087 | 5.4:+15182046 | None:intergenic |
| AACATACCTCAAGCCCTCGA+TGG | 0.552579 | 5.4:+15181219 | None:intergenic |
| GTTTCACTACTGTGAAGCTA+AGG | 0.552998 | 5.4:-15183579 | MS.gene67548:CDS |
| TCAAGCTCGAATGGGAATGA+TGG | 0.553083 | 5.4:-15180649 | MS.gene67548:CDS |
| AGATGCACTCTTTCAACAGA+GGG | 0.553687 | 5.4:+15179370 | None:intergenic |
| CTAAACCGAATGTGTATCCA+AGG | 0.555284 | 5.4:+15178133 | None:intergenic |
| TTGTGTCTACTGTTGTAACA+AGG | 0.557248 | 5.4:-15179085 | MS.gene67548:CDS |
| GCAATTCAAGGACTCTCTGA+TGG | 0.560406 | 5.4:-15178111 | MS.gene67548:CDS |
| TCCGACGATGCATGCTTCGT+CGG | 0.562198 | 5.4:-15183789 | MS.gene67548:CDS |
| GGGAGCCCATCGAGGGCTTG+AGG | 0.565566 | 5.4:-15181225 | MS.gene67548:intron |
| CGAATGTGTATCCAAGGGCA+AGG | 0.566219 | 5.4:+15178139 | None:intergenic |
| ACATACCTCAAGCCCTCGAT+GGG | 0.566713 | 5.4:+15181220 | None:intergenic |
| TCGTTCCTCGTTCTTCTCAA+CGG | 0.569879 | 5.4:-15183908 | MS.gene67548:CDS |
| TGTGGTGGGCCACCTTGTCA+AGG | 0.574035 | 5.4:-15180870 | MS.gene67548:CDS |
| AAGAATCTAAGAAGCTTGAG+TGG | 0.574067 | 5.4:-15181986 | MS.gene67548:CDS |
| GTGGTGAGACTTACAGGAAG+AGG | 0.574419 | 5.4:+15181013 | None:intergenic |
| ATGATGATAGCGATGATGAA+AGG | 0.575051 | 5.4:-15180078 | MS.gene67548:CDS |
| GTGGTATGCTGTATGATCAC+AGG | 0.577358 | 5.4:-15179597 | MS.gene67548:CDS |
| CAACACTTTCAAGTGAATCC+GGG | 0.580699 | 5.4:-15182064 | MS.gene67548:CDS |
| TTAGTATTCGAGAGAATGCA+AGG | 0.585626 | 5.4:-15178748 | MS.gene67548:CDS |
| CGCTCCAAAGCAAAGGCCAG+TGG | 0.588179 | 5.4:+15181926 | None:intergenic |
| GACAACTTGGGTACTTAAAG+GGG | 0.589664 | 5.4:+15178070 | None:intergenic |
| AATTTGCTGGTGGCTTTCTG+GGG | 0.589706 | 5.4:-15180707 | MS.gene67548:CDS |
| TCCGACGAAGCATGCATCGT+CGG | 0.591598 | 5.4:+15183788 | None:intergenic |
| CTTTAACAAGCACTCCCTTG+AGG | 0.595401 | 5.4:+15179413 | None:intergenic |
| GCAAACTCTCTCATAGTCAT+CGG | 0.597622 | 5.4:+15179558 | None:intergenic |
| CGATTCCAGTTATGATACAT+GGG | 0.597731 | 5.4:-15181245 | MS.gene67548:CDS |
| AAATAGACGCTCCAAAGCAA+AGG | 0.600764 | 5.4:+15181919 | None:intergenic |
| CATATATACATACTTAGAAG+AGG | 0.600894 | 5.4:+15179215 | None:intergenic |
| GCGATGATGAAAGGAGCTAT+GGG | 0.602155 | 5.4:-15180069 | MS.gene67548:CDS |
| AAGCAATGGCCTTACTTCAG+TGG | 0.602447 | 5.4:+15180566 | None:intergenic |
| AAATGCAGTTGCTGTTCCTG+TGG | 0.603453 | 5.4:-15178163 | MS.gene67548:CDS |
| AACCTCAAATACCTCAGAGT+CGG | 0.604058 | 5.4:+15181435 | None:intergenic |
| GGAGGATAATGCTTATGTCA+AGG | 0.604274 | 5.4:-15183534 | MS.gene67548:intron |
| TGAGTTGGTAATGGATATGA+CGG | 0.605209 | 5.4:+15180442 | None:intergenic |
| TGTGACGAGTTTGTACTGAA+TGG | 0.605238 | 5.4:-15181538 | MS.gene67548:CDS |
| AGAAGCTGATGATGAAGCGA+TGG | 0.605443 | 5.4:-15181467 | MS.gene67548:CDS |
| TGCAGGTGATTAAGGACCAT+GGG | 0.609611 | 5.4:-15182503 | MS.gene67548:intron |
| GATAATTCATGGCCACTAGA+CGG | 0.613254 | 5.4:+15180670 | None:intergenic |
| GATACATGGGAGCCCATCGA+GGG | 0.613692 | 5.4:-15181232 | MS.gene67548:CDS |
| AATAACCTGATTATGAGGCT+CGG | 0.618623 | 5.4:+15179061 | None:intergenic |
| TATGCAATGACATTTGTTCG+TGG | 0.619188 | 5.4:-15179240 | MS.gene67548:CDS |
| TGATCATACAGCATACCACT+TGG | 0.622966 | 5.4:+15179601 | None:intergenic |
| GAATGCTGGCAAAGAAGCTG+AGG | 0.624902 | 5.4:-15181491 | MS.gene67548:CDS |
| AAGAATGGGCTAGACAACTT+GGG | 0.629534 | 5.4:+15178058 | None:intergenic |
| CACGCATCCGAAATTGAGGA+AGG | 0.629581 | 5.4:+15180610 | None:intergenic |
| AGTTCTTACTTCAAACTCAG+TGG | 0.631096 | 5.4:+15180393 | None:intergenic |
| TAGATGCACTCTTTCAACAG+AGG | 0.633772 | 5.4:+15179369 | None:intergenic |
| GAATGGGAATGATGGCTGCA+GGG | 0.641368 | 5.4:-15180641 | MS.gene67548:CDS |
| GCTTGTTAAAGAAAACAAAG+TGG | 0.643700 | 5.4:-15179401 | MS.gene67548:CDS |
| GGATAATTCATCCGACTCTG+AGG | 0.644647 | 5.4:-15181446 | MS.gene67548:CDS |
| GCAAACTTCAGGGACCTCAA+GGG | 0.650920 | 5.4:-15179427 | MS.gene67548:CDS |
| GAATGTGTATCCAAGGGCAA+GGG | 0.651696 | 5.4:+15178140 | None:intergenic |
| GGCCAAGGCATTAAACCTTG+AGG | 0.652857 | 5.4:-15180231 | MS.gene67548:CDS |
| TGTGTCTACTGTTGTAACAA+GGG | 0.655093 | 5.4:-15179084 | MS.gene67548:CDS |
| TTAAAGGGGAGAGTTGTCAA+AGG | 0.658649 | 5.4:+15178084 | None:intergenic |
| GACTCTCAAAGTGCACCAAG+TGG | 0.659799 | 5.4:-15179616 | MS.gene67548:CDS |
| TTCTTACTTCAAACTCAGTG+GGG | 0.660921 | 5.4:+15180395 | None:intergenic |
| ATATCCATTACCAACTCATG+AGG | 0.662188 | 5.4:-15180437 | MS.gene67548:CDS |
| CCGTGCAACTGATAAGAAAG+GGG | 0.670667 | 5.4:-15182033 | MS.gene67548:CDS |
| TCGTTCTTGGTGTATCGGTG+AGG | 0.672316 | 5.4:+15183729 | None:intergenic |
| GTGCAGGTGATTAAGGACCA+TGG | 0.674534 | 5.4:-15182504 | MS.gene67548:intron |
| ATATCAAAATAGAAGTCACA+AGG | 0.681018 | 5.4:+15182258 | None:intergenic |
| GATGCACTCTTTCAACAGAG+GGG | 0.682334 | 5.4:+15179371 | None:intergenic |
| CCACTAACACCTTGACAAGG+TGG | 0.683957 | 5.4:+15180861 | None:intergenic |
| TAAACCGAATGTGTATCCAA+GGG | 0.685117 | 5.4:+15178134 | None:intergenic |
| TGATACATGGGAGCCCATCG+AGG | 0.686118 | 5.4:-15181233 | MS.gene67548:CDS |
| TTTGTGGCCCTGTCAAACAG+AGG | 0.688111 | 5.4:-15178697 | MS.gene67548:intron |
| ACACATACCTCTGTTTGACA+GGG | 0.690367 | 5.4:+15178690 | None:intergenic |
| TTCTTCCGTTGAGAAGAACG+AGG | 0.699637 | 5.4:+15183903 | None:intergenic |
| TCAAAATAGAAGTCACAAGG+AGG | 0.707483 | 5.4:+15182261 | None:intergenic |
| GGAGATGTTTGAAACTCCTG+AGG | 0.713389 | 5.4:-15182656 | MS.gene67548:CDS |
| AAACCACTAACACCTTGACA+AGG | 0.729461 | 5.4:+15180858 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTAATTTTTTTTA+TGG | - | chr5.4:15178768-15178787 | MS.gene67548:CDS | 0.0% |
| !!! | ACTATCTAAATATTTTTAAA+TGG | - | chr5.4:15181472-15181491 | MS.gene67548:CDS | 10.0% |
| !! | AATCATAGATATTAGAAAAT+TGG | + | chr5.4:15183398-15183417 | None:intergenic | 15.0% |
| !! | TAATAATTAACTACACAATA+AGG | + | chr5.4:15180647-15180666 | None:intergenic | 15.0% |
| !! | TCAACATTAAATCAAATAAA+AGG | + | chr5.4:15179136-15179155 | None:intergenic | 15.0% |
| !! | TTTATTTCATGTTGAAAATT+TGG | - | chr5.4:15179101-15179120 | MS.gene67548:CDS | 15.0% |
| !!! | ATGAAAGATTTTGTTATAAA+TGG | - | chr5.4:15180922-15180941 | MS.gene67548:intron | 15.0% |
| !!! | TAATTTTTTTTATGGTTCAT+TGG | - | chr5.4:15178776-15178795 | MS.gene67548:CDS | 15.0% |
| !!! | TATATATGTACATCTATTTT+AGG | - | chr5.4:15182777-15182796 | MS.gene67548:intron | 15.0% |
| !!! | TCTAAATATTTTTAAATGGA+AGG | - | chr5.4:15181476-15181495 | MS.gene67548:CDS | 15.0% |
| !!! | TTTTGTTATAAATGGATATA+AGG | - | chr5.4:15180930-15180949 | MS.gene67548:intron | 15.0% |
| !! | AAACTATATTCACAATGTAT+TGG | + | chr5.4:15181813-15181832 | None:intergenic | 20.0% |
| !! | ATAATAGGTTAATCAATTGT+TGG | + | chr5.4:15183532-15183551 | None:intergenic | 20.0% |
| !! | ATATGGAAGTTAGTTATAAT+AGG | + | chr5.4:15183547-15183566 | None:intergenic | 20.0% |
| !! | ATGTTAGCAAAAGTTAAATA+TGG | + | chr5.4:15179758-15179777 | None:intergenic | 20.0% |
| !! | CACAATCAACATAAAAAATT+TGG | + | chr5.4:15179846-15179865 | None:intergenic | 20.0% |
| !! | CTATAAATTTCTTATCTTTC+AGG | - | chr5.4:15180693-15180712 | MS.gene67548:CDS | 20.0% |
| !! | GTGCAATTTAGTAATAAATA+TGG | + | chr5.4:15183564-15183583 | None:intergenic | 20.0% |
| !! | TCAACATGATATCAAATAAA+AGG | + | chr5.4:15179022-15179041 | None:intergenic | 20.0% |
| !! | TCAACATTAAATCAAAAGAA+AGG | + | chr5.4:15178908-15178927 | None:intergenic | 20.0% |
| !! | TTAGGTGTAATATTTCTTAT+TGG | - | chr5.4:15183624-15183643 | MS.gene67548:intron | 20.0% |
| !!! | AATGTTGAAAATTGTGTTTT+AGG | - | chr5.4:15178920-15178939 | MS.gene67548:intron | 20.0% |
| !!! | AATGTTGAAAATTGTGTTTT+TGG | - | chr5.4:15178920-15178939 | MS.gene67548:intron | 20.0% |
| !!! | AATTTTAACTCTTGTGTTTT+GGG | - | chr5.4:15179401-15179420 | MS.gene67548:CDS | 20.0% |
| !!! | ATAGTCAATATCTTGATAAT+TGG | + | chr5.4:15180784-15180803 | None:intergenic | 20.0% |
| !!! | ATTTTGATTTTTTTGCATGT+TGG | - | chr5.4:15178708-15178727 | MS.gene67548:CDS | 20.0% |
| !!! | CAAATTTTTTATGTTGATTG+TGG | - | chr5.4:15179844-15179863 | MS.gene67548:intron | 20.0% |
| !!! | GTTGAAAATTTGATGTTTTA+GGG | - | chr5.4:15178516-15178535 | MS.gene67548:intron | 20.0% |
| !!! | TAATTTGCATAATGTTTCTT+TGG | - | chr5.4:15180111-15180130 | MS.gene67548:intron | 20.0% |
| !!! | TATACAACATTGTTTTAAAG+AGG | + | chr5.4:15183008-15183027 | None:intergenic | 20.0% |
| !!! | TGTTGAAAATTTGATGTTTT+AGG | - | chr5.4:15178515-15178534 | MS.gene67548:intron | 20.0% |
| !!! | TTAGATTCTTTAATTTGAGT+TGG | + | chr5.4:15179981-15180000 | None:intergenic | 20.0% |
| !!! | TTCTACTGATTTTATAATCT+TGG | - | chr5.4:15180163-15180182 | MS.gene67548:intron | 20.0% |
| !!! | TTGATTTCATGTTGATAATT+TGG | - | chr5.4:15178987-15179006 | MS.gene67548:intron | 20.0% |
| ! | AAAACTAGTACTATAAGCAA+TGG | + | chr5.4:15181428-15181447 | None:intergenic | 25.0% |
| ! | AATAGTTACATCTTTAATGC+AGG | - | chr5.4:15183777-15183796 | MS.gene67548:CDS | 25.0% |
| ! | AGTTAATTATTATCAGCTAG+TGG | - | chr5.4:15180655-15180674 | MS.gene67548:CDS | 25.0% |
| ! | ATATCAAAATAGAAGTCACA+AGG | + | chr5.4:15179722-15179741 | None:intergenic | 25.0% |
| ! | ATCAACTACATCTAAAGAAT+GGG | + | chr5.4:15183936-15183955 | None:intergenic | 25.0% |
| ! | ATCCTTTAGATTGTTTAGTT+AGG | - | chr5.4:15179546-15179565 | MS.gene67548:CDS | 25.0% |
| ! | ATCTTAAGTAAAGCAAAGTT+AGG | + | chr5.4:15180813-15180832 | None:intergenic | 25.0% |
| ! | ATGATTTCGTGTTGAAAATT+GGG | - | chr5.4:15178630-15178649 | MS.gene67548:intron | 25.0% |
| ! | ATTTATCAGCTAAAATGTAC+TGG | - | chr5.4:15182154-15182173 | MS.gene67548:intron | 25.0% |
| ! | CATAGATATTAGAAAATTGG+TGG | + | chr5.4:15183395-15183414 | None:intergenic | 25.0% |
| ! | CATATATACATACTTAGAAG+AGG | + | chr5.4:15182765-15182784 | None:intergenic | 25.0% |
| ! | TAAAGAAAACAAAGTGGAAT+GGG | - | chr5.4:15182582-15182601 | MS.gene67548:intron | 25.0% |
| ! | TAGGATTCATTTCTTTGATT+TGG | - | chr5.4:15179053-15179072 | MS.gene67548:intron | 25.0% |
| ! | TATAACTAGAATTGTGTATG+TGG | - | chr5.4:15182220-15182239 | MS.gene67548:CDS | 25.0% |
| ! | TATATCAGATTAAAGAGAAG+TGG | - | chr5.4:15181958-15181977 | MS.gene67548:CDS | 25.0% |
| ! | TATGATTTCGTGTTGAAAAT+TGG | - | chr5.4:15178629-15178648 | MS.gene67548:intron | 25.0% |
| ! | TATGGTTCATTTCTTTGATT+TGG | - | chr5.4:15178827-15178846 | MS.gene67548:intron | 25.0% |
| ! | TCTTAAGTAAAGCAAAGTTA+GGG | + | chr5.4:15180812-15180831 | None:intergenic | 25.0% |
| ! | TTAAAGAAAACAAAGTGGAA+TGG | - | chr5.4:15182581-15182600 | MS.gene67548:intron | 25.0% |
| ! | TTCAATATTTACAGTGTCTT+CGG | + | chr5.4:15179383-15179402 | None:intergenic | 25.0% |
| ! | TTCCTAACTAAACAATCTAA+AGG | + | chr5.4:15179551-15179570 | None:intergenic | 25.0% |
| ! | TTGGATTCATTTCTTTGATT+TGG | - | chr5.4:15178939-15178958 | MS.gene67548:intron | 25.0% |
| !! | AACAATATTTTACTGCTCAA+TGG | - | chr5.4:15179347-15179366 | MS.gene67548:intron | 25.0% |
| !! | ATATGAAGTATTTAGAGACA+AGG | - | chr5.4:15183442-15183461 | MS.gene67548:intron | 25.0% |
| !! | ATGTTGAAAACTGTGTTTTA+TGG | - | chr5.4:15178809-15178828 | MS.gene67548:intron | 25.0% |
| !! | TCATCGGTATTTAATTTCAA+AGG | + | chr5.4:15182406-15182425 | None:intergenic | 25.0% |
| !! | TGATGGAATTTTATATAAGC+TGG | - | chr5.4:15178422-15178441 | MS.gene67548:intron | 25.0% |
| !! | TGTTTGTTGAATGTTGTTTA+GGG | - | chr5.4:15179262-15179281 | MS.gene67548:intron | 25.0% |
| !! | TTATTTCTTTGATTGCATGT+TGG | - | chr5.4:15178540-15178559 | MS.gene67548:intron | 25.0% |
| !! | TTCTTATTGGTCTAACAATA+TGG | - | chr5.4:15183637-15183656 | MS.gene67548:intron | 25.0% |
| !! | TTGTTTGTTGAATGTTGTTT+AGG | - | chr5.4:15179261-15179280 | MS.gene67548:intron | 25.0% |
| !! | TTTGAGTCATGTTGAAATTT+TGG | - | chr5.4:15178873-15178892 | MS.gene67548:intron | 25.0% |
| !!! | ATGTTGATTTTGTTTACTAC+AGG | - | chr5.4:15179673-15179692 | MS.gene67548:intron | 25.0% |
| !!! | CATGTTGAAAATTTGGTTTT+AGG | - | chr5.4:15179108-15179127 | MS.gene67548:CDS | 25.0% |
| !!! | CATGTTGAAATTTTGGTTTT+AGG | - | chr5.4:15178880-15178899 | MS.gene67548:intron | 25.0% |
| !!! | CATGTTGATAATTTGGTTTT+AGG | - | chr5.4:15178994-15179013 | MS.gene67548:intron | 25.0% |
| !!! | CTATTTTGATATGAAGTACA+CGG | - | chr5.4:15179730-15179749 | MS.gene67548:intron | 25.0% |
| !!! | CTTACTTTAAAATAAAGTCC+TGG | + | chr5.4:15180616-15180635 | None:intergenic | 25.0% |
| !!! | GAATTTTAACTCTTGTGTTT+TGG | - | chr5.4:15179400-15179419 | MS.gene67548:CDS | 25.0% |
| !!! | TATTTTTGAAAATCAGTACG+AGG | + | chr5.4:15181940-15181959 | None:intergenic | 25.0% |
| !!! | TGTTTTTGACTTGAAGAAAT+GGG | - | chr5.4:15180187-15180206 | MS.gene67548:intron | 25.0% |
| !!! | TTATTTTTTTCATCCTCCAA+TGG | + | chr5.4:15181170-15181189 | None:intergenic | 25.0% |
| !!! | TTGTTTTTGACTTGAAGAAA+TGG | - | chr5.4:15180186-15180205 | MS.gene67548:intron | 25.0% |
| !!! | TTTAGGGTTATTGTTGATTT+TGG | - | chr5.4:15179436-15179455 | MS.gene67548:intron | 25.0% |
| !!! | TTTTAAAGAGGTTTTGCAAT+GGG | + | chr5.4:15182996-15183015 | None:intergenic | 25.0% |
| AACAAAATCAACATACTGGA+GGG | + | chr5.4:15181788-15181807 | None:intergenic | 30.0% | |
| AACAGATTCCAATCTCAAAA+TGG | + | chr5.4:15183493-15183512 | None:intergenic | 30.0% | |
| ACAAATGTCATTGCATAATC+TGG | + | chr5.4:15182734-15182753 | None:intergenic | 30.0% | |
| ACTAATCTTGTCTTGTCTTA+GGG | - | chr5.4:15182651-15182670 | MS.gene67548:CDS | 30.0% | |
| ACTTTACTGGATTTGTATTC+TGG | - | chr5.4:15180014-15180033 | MS.gene67548:intron | 30.0% | |
| AGAACTTTACTATCACAACA+TGG | + | chr5.4:15181652-15181671 | None:intergenic | 30.0% | |
| AGACTTAAAAAGTCTTCTGT+GGG | + | chr5.4:15180397-15180416 | None:intergenic | 30.0% | |
| AGATATGATACCTTCTTCTT+TGG | + | chr5.4:15182451-15182470 | None:intergenic | 30.0% | |
| ATGAATTATCAAGCTCGAAT+GGG | - | chr5.4:15181320-15181339 | MS.gene67548:intron | 30.0% | |
| ATTCCAATCTCAAAATGGAA+GGG | + | chr5.4:15183488-15183507 | None:intergenic | 30.0% | |
| CAAACAATAACCTGATTATG+AGG | + | chr5.4:15182924-15182943 | None:intergenic | 30.0% | |
| CATCAACTACATCTAAAGAA+TGG | + | chr5.4:15183937-15183956 | None:intergenic | 30.0% | |
| CTCACCTGAATTTAACATTT+CGG | + | chr5.4:15180367-15180386 | None:intergenic | 30.0% | |
| CTTAAGTAAAGCAAAGTTAG+GGG | + | chr5.4:15180811-15180830 | None:intergenic | 30.0% | |
| CTTTACTGGATTTGTATTCT+GGG | - | chr5.4:15180015-15180034 | MS.gene67548:intron | 30.0% | |
| GAACTTTACTATCACAACAT+GGG | + | chr5.4:15181651-15181670 | None:intergenic | 30.0% | |
| GAGAATTGATAAACCATTAG+AGG | + | chr5.4:15181026-15181045 | None:intergenic | 30.0% | |
| GATTGTATGAATCTTACTCT+AGG | + | chr5.4:15182131-15182150 | None:intergenic | 30.0% | |
| GTAAAATATTGTTCTTCCTC+AGG | + | chr5.4:15179340-15179359 | None:intergenic | 30.0% | |
| TACTAATCTTGTCTTGTCTT+AGG | - | chr5.4:15182650-15182669 | MS.gene67548:CDS | 30.0% | |
| TAGCTATAAGCCTTAAGTAA+CGG | + | chr5.4:15180840-15180859 | None:intergenic | 30.0% | |
| TCACCTGAATTTAACATTTC+GGG | + | chr5.4:15180366-15180385 | None:intergenic | 30.0% | |
| TCCTTCATCATTAAACTGAA+CGG | - | chr5.4:15182290-15182309 | MS.gene67548:intron | 30.0% | |
| TTGAGTACAAGTCAATAATG+AGG | + | chr5.4:15180991-15181010 | None:intergenic | 30.0% | |
| TTTAAGTCTCCTAAAAGAGT+GGG | - | chr5.4:15180408-15180427 | MS.gene67548:CDS | 30.0% | |
| TTTGATTCCACTTCTTTACT+CGG | - | chr5.4:15181851-15181870 | MS.gene67548:intron | 30.0% | |
| ! | AAGTTCTAATCAATGTGATC+TGG | - | chr5.4:15181665-15181684 | MS.gene67548:intron | 30.0% |
| ! | ACTTTTGCTAACATTGACAA+TGG | - | chr5.4:15179764-15179783 | MS.gene67548:intron | 30.0% |
| ! | AGTTCTAATCAATGTGATCT+GGG | - | chr5.4:15181666-15181685 | MS.gene67548:intron | 30.0% |
| ! | CATGTTGAAAACTGTGTTTT+AGG | - | chr5.4:15178808-15178827 | MS.gene67548:intron | 30.0% |
| ! | GCTTGTTAAAGAAAACAAAG+TGG | - | chr5.4:15182576-15182595 | MS.gene67548:intron | 30.0% |
| ! | GGTTAATCAATTGTTGGTTA+AGG | + | chr5.4:15183526-15183545 | None:intergenic | 30.0% |
| ! | GTTGTGAATTTTCTGCTTTA+GGG | - | chr5.4:15178598-15178617 | MS.gene67548:intron | 30.0% |
| ! | GTTGTTTGGGTTTATTGATT+TGG | - | chr5.4:15179203-15179222 | MS.gene67548:intron | 30.0% |
| ! | GTTTGTTGAATGTTGTTTAG+GGG | - | chr5.4:15179263-15179282 | MS.gene67548:intron | 30.0% |
| ! | TCAATTGTTGGTTAAGGAAT+TGG | + | chr5.4:15183520-15183539 | None:intergenic | 30.0% |
| ! | TGGAATTTTATATAAGCTGG+AGG | - | chr5.4:15178425-15178444 | MS.gene67548:intron | 30.0% |
| ! | TGTTGTGAATTTTCTGCTTT+AGG | - | chr5.4:15178597-15178616 | MS.gene67548:intron | 30.0% |
| ! | TTTGTTGAATGTTGTTTAGG+GGG | - | chr5.4:15179264-15179283 | MS.gene67548:intron | 30.0% |
| !! | AAGCTGATTTTATTTGTGGT+GGG | - | chr5.4:15181093-15181112 | MS.gene67548:intron | 30.0% |
| !! | GATTCATTTCTTTGATTTGG+TGG | - | chr5.4:15178942-15178961 | MS.gene67548:intron | 30.0% |
| !! | TCATTTCTTTGATTTGGTGA+TGG | - | chr5.4:15178833-15178852 | MS.gene67548:intron | 30.0% |
| !! | TCATTTCTTTGATTTGGTGT+TGG | - | chr5.4:15178945-15178964 | MS.gene67548:intron | 30.0% |
| !! | TTAGATGTAGTTGATGATGA+TGG | - | chr5.4:15183941-15183960 | MS.gene67548:CDS | 30.0% |
| !! | TTTTAAGTCTCCTAAAAGAG+TGG | - | chr5.4:15180407-15180426 | MS.gene67548:CDS | 30.0% |
| !!! | GTAGACATTTTGAAATTTGC+TGG | - | chr5.4:15181257-15181276 | MS.gene67548:CDS | 30.0% |
| !!! | GTTTTAAAGAGGTTTTGCAA+TGG | + | chr5.4:15182997-15183016 | None:intergenic | 30.0% |
| !!! | TTGGTTCATTTTAACTTTGC+TGG | - | chr5.4:15180130-15180149 | MS.gene67548:intron | 30.0% |
| !!! | TTTGAGTTTTGAAGTAGTCT+TGG | - | chr5.4:15181998-15182017 | MS.gene67548:CDS | 30.0% |
| AAACCATTAGAGGTGAAAGA+AGG | + | chr5.4:15181016-15181035 | None:intergenic | 35.0% | |
| AAACTACTCTCTATCTGCTA+TGG | - | chr5.4:15180568-15180587 | MS.gene67548:intron | 35.0% | |
| AACCATTAGAGGTGAAAGAA+GGG | + | chr5.4:15181015-15181034 | None:intergenic | 35.0% | |
| AAGAATCTAAGAAGCTTGAG+TGG | - | chr5.4:15179991-15180010 | MS.gene67548:intron | 35.0% | |
| AAGTTCTTTACTGATCCCAT+AGG | + | chr5.4:15183604-15183623 | None:intergenic | 35.0% | |
| AATAACCTGATTATGAGGCT+CGG | + | chr5.4:15182919-15182938 | None:intergenic | 35.0% | |
| ACATTCGGTTTAGCAATTCA+AGG | - | chr5.4:15183854-15183873 | MS.gene67548:CDS | 35.0% | |
| ACGATTCCAGTTATGATACA+TGG | - | chr5.4:15180731-15180750 | MS.gene67548:CDS | 35.0% | |
| AGAAACCAGTTCTTCTTCAA+CGG | + | chr5.4:15178123-15178142 | None:intergenic | 35.0% | |
| AGACAACTTGGGTACTTAAA+GGG | + | chr5.4:15183911-15183930 | None:intergenic | 35.0% | |
| AGCTATAAGCCTTAAGTAAC+GGG | + | chr5.4:15180839-15180858 | None:intergenic | 35.0% | |
| AGTTCTTACTTCAAACTCAG+TGG | + | chr5.4:15181587-15181606 | None:intergenic | 35.0% | |
| ATAGAAAACTCACTCGTTCT+TGG | + | chr5.4:15178264-15178283 | None:intergenic | 35.0% | |
| ATATCCATTACCAACTCATG+AGG | - | chr5.4:15181540-15181559 | MS.gene67548:CDS | 35.0% | |
| ATCTGACCATGTTCTTTGTT+TGG | - | chr5.4:15183083-15183102 | MS.gene67548:intron | 35.0% | |
| ATGCAATGACATTTGTTCGT+GGG | - | chr5.4:15182738-15182757 | MS.gene67548:intron | 35.0% | |
| ATGCTAACATGATAATCCTG+AGG | + | chr5.4:15183047-15183066 | None:intergenic | 35.0% | |
| CAAAACATACGTGTGTTTCT+GGG | + | chr5.4:15180259-15180278 | None:intergenic | 35.0% | |
| CAAGACAAGATTAGTACCAA+AGG | + | chr5.4:15182646-15182665 | None:intergenic | 35.0% | |
| CACCACAAATAAAATCAGCT+TGG | + | chr5.4:15181094-15181113 | None:intergenic | 35.0% | |
| CACTAATGAAAATTGTCAGC+TGG | - | chr5.4:15181725-15181744 | MS.gene67548:intron | 35.0% | |
| CATGAATTATCAAGCTCGAA+TGG | - | chr5.4:15181319-15181338 | MS.gene67548:intron | 35.0% | |
| CCTTCATCATTAAACTGAAC+GGG | - | chr5.4:15182291-15182310 | MS.gene67548:intron | 35.0% | |
| CGAAATGTTAAATTCAGGTG+AGG | - | chr5.4:15180365-15180384 | MS.gene67548:intron | 35.0% | |
| CGATTCCAGTTATGATACAT+GGG | - | chr5.4:15180732-15180751 | MS.gene67548:CDS | 35.0% | |
| CTTCCCGAAATGTTAAATTC+AGG | - | chr5.4:15180360-15180379 | MS.gene67548:intron | 35.0% | |
| GAACAAAATCAACATACTGG+AGG | + | chr5.4:15181789-15181808 | None:intergenic | 35.0% | |
| GAGACTTAAAAAGTCTTCTG+TGG | + | chr5.4:15180398-15180417 | None:intergenic | 35.0% | |
| GATCATTAATTGCATCCTCA+AGG | + | chr5.4:15181764-15181783 | None:intergenic | 35.0% | |
| GATTCCAATCTCAAAATGGA+AGG | + | chr5.4:15183489-15183508 | None:intergenic | 35.0% | |
| GCCATGCTATACATAATGAT+GGG | + | chr5.4:15183753-15183772 | None:intergenic | 35.0% | |
| GGAATCTAGTTGACAAAAAG+AGG | - | chr5.4:15179495-15179514 | MS.gene67548:intron | 35.0% | |
| GGTGAACAAAATCAACATAC+TGG | + | chr5.4:15181792-15181811 | None:intergenic | 35.0% | |
| GTTCTTACTTCAAACTCAGT+GGG | + | chr5.4:15181586-15181605 | None:intergenic | 35.0% | |
| TAAACCGAATGTGTATCCAA+GGG | + | chr5.4:15183846-15183865 | None:intergenic | 35.0% | |
| TACAAGTCAATAATGAGGAG+TGG | + | chr5.4:15180986-15181005 | None:intergenic | 35.0% | |
| TACTACTTTATGCTCGTACA+GGG | - | chr5.4:15181068-15181087 | MS.gene67548:CDS | 35.0% | |
| TAGACAACTTGGGTACTTAA+AGG | + | chr5.4:15183912-15183931 | None:intergenic | 35.0% | |
| TATGCAATGACATTTGTTCG+TGG | - | chr5.4:15182737-15182756 | MS.gene67548:intron | 35.0% | |
| TCAAAATAGAAGTCACAAGG+AGG | + | chr5.4:15179719-15179738 | None:intergenic | 35.0% | |
| TCCCATCATTATGTATAGCA+TGG | - | chr5.4:15183749-15183768 | MS.gene67548:CDS | 35.0% | |
| TCGATGAAGCTCAAAAGAAA+TGG | - | chr5.4:15178225-15178244 | MS.gene67548:intron | 35.0% | |
| TGAGAAATGTTATTGACCTC+AGG | - | chr5.4:15183028-15183047 | MS.gene67548:intron | 35.0% | |
| TGCCATGCTATACATAATGA+TGG | + | chr5.4:15183754-15183773 | None:intergenic | 35.0% | |
| TGTGTCTACTGTTGTAACAA+GGG | - | chr5.4:15182893-15182912 | MS.gene67548:intron | 35.0% | |
| TTAGTATTCGAGAGAATGCA+AGG | - | chr5.4:15183229-15183248 | MS.gene67548:intron | 35.0% | |
| TTCGCTTTCTTTCTTCTAGA+AGG | + | chr5.4:15178152-15178171 | None:intergenic | 35.0% | |
| TTCTCCATCAGAACATACTT+AGG | + | chr5.4:15181233-15181252 | None:intergenic | 35.0% | |
| TTCTTACTTCAAACTCAGTG+GGG | + | chr5.4:15181585-15181604 | None:intergenic | 35.0% | |
| TTGATTCCACTTCTTTACTC+GGG | - | chr5.4:15181852-15181871 | MS.gene67548:intron | 35.0% | |
| TTGTGTCTACTGTTGTAACA+AGG | - | chr5.4:15182892-15182911 | MS.gene67548:intron | 35.0% | |
| ! | ACAGATTCTGATTTGAATGC+TGG | - | chr5.4:15180472-15180491 | MS.gene67548:intron | 35.0% |
| ! | ATGATGATAGCGATGATGAA+AGG | - | chr5.4:15181899-15181918 | MS.gene67548:CDS | 35.0% |
| ! | ATGCTGAATACTGTGTTGTT+TGG | - | chr5.4:15179189-15179208 | MS.gene67548:intron | 35.0% |
| ! | CAGCTGACAATTTTCATTAG+TGG | + | chr5.4:15181727-15181746 | None:intergenic | 35.0% |
| ! | CATTCGAGCTTGATAATTCA+TGG | + | chr5.4:15181321-15181340 | None:intergenic | 35.0% |
| ! | GAAAGAGTGCATCTAAAATC+TGG | - | chr5.4:15182616-15182635 | MS.gene67548:CDS | 35.0% |
| ! | GAAGTATTTAGAGACAAGGA+TGG | - | chr5.4:15183446-15183465 | MS.gene67548:intron | 35.0% |
| ! | GGGATCAGTAAAGAACTTTT+AGG | - | chr5.4:15183606-15183625 | MS.gene67548:CDS | 35.0% |
| ! | TCAACACTTTCAAGTGAATC+CGG | - | chr5.4:15179912-15179931 | MS.gene67548:intron | 35.0% |
| ! | TCGGGTTTCTTTTATCAAAC+AGG | - | chr5.4:15181870-15181889 | MS.gene67548:intron | 35.0% |
| ! | TCTAAAATCTGGAAAGCCTT+TGG | - | chr5.4:15182627-15182646 | MS.gene67548:CDS | 35.0% |
| ! | TCTGGGTACTTTTATAATGC+AGG | - | chr5.4:15181683-15181702 | MS.gene67548:intron | 35.0% |
| ! | TGGGTTTGTTTAGCTGTTTA+GGG | - | chr5.4:15179420-15179439 | MS.gene67548:CDS | 35.0% |
| ! | TGTGCTTGCTTGTCTTTTTA+GGG | - | chr5.4:15182526-15182545 | MS.gene67548:intron | 35.0% |
| ! | TTAGAAAATTGGTGGATGCA+AGG | + | chr5.4:15183387-15183406 | None:intergenic | 35.0% |
| ! | TTCTTATCTTTCAGGTGCAT+TGG | - | chr5.4:15180701-15180720 | MS.gene67548:CDS | 35.0% |
| ! | TTGGGTTTGTTTAGCTGTTT+AGG | - | chr5.4:15179419-15179438 | MS.gene67548:CDS | 35.0% |
| ! | TTGTGCTTGCTTGTCTTTTT+AGG | - | chr5.4:15182525-15182544 | MS.gene67548:intron | 35.0% |
| ! | TTGTTGGTTAAGGAATTGGA+AGG | + | chr5.4:15183516-15183535 | None:intergenic | 35.0% |
| ! | TTTGTGCCTTTTCTTAGACA+AGG | - | chr5.4:15181623-15181642 | MS.gene67548:intron | 35.0% |
| ! | TTTTGTCAACTAGATTCCCA+TGG | + | chr5.4:15179493-15179512 | None:intergenic | 35.0% |
| !! | ATACCTTCTTCTTTGGAATG+TGG | + | chr5.4:15182444-15182463 | None:intergenic | 35.0% |
| !! | CAAGCTGATTTTATTTGTGG+TGG | - | chr5.4:15181092-15181111 | MS.gene67548:intron | 35.0% |
| !! | CCTGGTTTTTCATCTTCATT+GGG | + | chr5.4:15180598-15180617 | None:intergenic | 35.0% |
| !! | TCATTTCTTTGATTTGGTGG+TGG | - | chr5.4:15179059-15179078 | MS.gene67548:intron | 35.0% |
| !! | TCCTGGTTTTTCATCTTCAT+TGG | + | chr5.4:15180599-15180618 | None:intergenic | 35.0% |
| !! | TGAGTTGGTAATGGATATGA+CGG | + | chr5.4:15181538-15181557 | None:intergenic | 35.0% |
| !! | TGCTGAATACTGTGTTGTTT+GGG | - | chr5.4:15179190-15179209 | MS.gene67548:intron | 35.0% |
| !!! | GACATTTTGAAATTTGCTGG+TGG | - | chr5.4:15181260-15181279 | MS.gene67548:CDS | 35.0% |
| !!! | GATTTACGAACGCGTTTTTT+AGG | + | chr5.4:15178032-15178051 | None:intergenic | 35.0% |
| !!! | GGGATTAACAGGAGATTTTT+TGG | + | chr5.4:15178102-15178121 | None:intergenic | 35.0% |
| AAAACACGCATCCGAAATTG+AGG | + | chr5.4:15181374-15181393 | None:intergenic | 40.0% | |
| AAACCACTAACACCTTGACA+AGG | + | chr5.4:15181122-15181141 | None:intergenic | 40.0% | |
| AAATAGACGCTCCAAAGCAA+AGG | + | chr5.4:15180061-15180080 | None:intergenic | 40.0% | |
| AACACATACCTCTGTTTGAC+AGG | + | chr5.4:15183291-15183310 | None:intergenic | 40.0% | |
| AACCTCAAATACCTCAGAGT+CGG | + | chr5.4:15180545-15180564 | None:intergenic | 40.0% | |
| AACCTGGAAATGGAATGACA+TGG | + | chr5.4:15183181-15183200 | None:intergenic | 40.0% | |
| AAGAAACCCGAGTAAAGAAG+TGG | + | chr5.4:15181861-15181880 | None:intergenic | 40.0% | |
| AATGTGTGTGCAGGTGATTA+AGG | - | chr5.4:15179466-15179485 | MS.gene67548:intron | 40.0% | |
| ACACATACCTCTGTTTGACA+GGG | + | chr5.4:15183290-15183309 | None:intergenic | 40.0% | |
| ACCATTAGAGGTGAAAGAAG+GGG | + | chr5.4:15181014-15181033 | None:intergenic | 40.0% | |
| ACCTGGAAATGGAATGACAT+GGG | + | chr5.4:15183180-15183199 | None:intergenic | 40.0% | |
| ACGAGTCCAAACAAAGAACA+TGG | + | chr5.4:15183092-15183111 | None:intergenic | 40.0% | |
| ACTGCTCAATAACTCTCCTA+TGG | - | chr5.4:15183585-15183604 | MS.gene67548:CDS | 40.0% | |
| AGATGCACTCTTTCAACAGA+GGG | + | chr5.4:15182610-15182629 | None:intergenic | 40.0% | |
| ATCCTCAAGGTTTAATGCCT+TGG | + | chr5.4:15181751-15181770 | None:intergenic | 40.0% | |
| ATGTATCTGCTGAACACAAC+AGG | - | chr5.4:15182841-15182860 | MS.gene67548:intron | 40.0% | |
| CATATGGCCTTCCTCAATTT+CGG | - | chr5.4:15181360-15181379 | MS.gene67548:intron | 40.0% | |
| CCAAAACATACGTGTGTTTC+TGG | + | chr5.4:15180260-15180279 | None:intergenic | 40.0% | |
| CCCAATGAAGATGAAAAACC+AGG | - | chr5.4:15180595-15180614 | MS.gene67548:CDS | 40.0% | |
| CCCGTTCAGTTTAATGATGA+AGG | + | chr5.4:15182294-15182313 | None:intergenic | 40.0% | |
| CCTGTGGAAAAAAAAGGTAG+TGG | + | chr5.4:15182709-15182728 | None:intergenic | 40.0% | |
| CTAAACCGAATGTGTATCCA+AGG | + | chr5.4:15183847-15183866 | None:intergenic | 40.0% | |
| CTGCTCAATAACTCTCCTAT+GGG | - | chr5.4:15183586-15183605 | MS.gene67548:CDS | 40.0% | |
| CTGGAACCTGTGGAAAAAAA+AGG | + | chr5.4:15182715-15182734 | None:intergenic | 40.0% | |
| GAAACCAGTTCTTCTTCAAC+GGG | + | chr5.4:15178122-15178141 | None:intergenic | 40.0% | |
| GAAGCCTAAGTATGTTCTGA+TGG | - | chr5.4:15181226-15181245 | MS.gene67548:CDS | 40.0% | |
| GACAACTTGGGTACTTAAAG+GGG | + | chr5.4:15183910-15183929 | None:intergenic | 40.0% | |
| GAGTGAGGATGAAAGTTTGA+AGG | - | chr5.4:15178371-15178390 | MS.gene67548:intron | 40.0% | |
| GATAATTCATGGCCACTAGA+CGG | + | chr5.4:15181310-15181329 | None:intergenic | 40.0% | |
| GCAAACTCTCTCATAGTCAT+CGG | + | chr5.4:15182422-15182441 | None:intergenic | 40.0% | |
| GCAGAATAATTCACCATCTC+TGG | + | chr5.4:15182340-15182359 | None:intergenic | 40.0% | |
| GCATGTTGTTACATGTCACA+TGG | - | chr5.4:15182248-15182267 | MS.gene67548:CDS | 40.0% | |
| GGAGGATAATGCTTATGTCA+AGG | - | chr5.4:15178443-15178462 | MS.gene67548:intron | 40.0% | |
| GGATTACATTGCTACGATTG+TGG | - | chr5.4:15179300-15179319 | MS.gene67548:intron | 40.0% | |
| GGTAATTTGAATGTGTGTGC+AGG | - | chr5.4:15179457-15179476 | MS.gene67548:intron | 40.0% | |
| GTACTACTTTATGCTCGTAC+AGG | - | chr5.4:15181067-15181086 | MS.gene67548:CDS | 40.0% | |
| GTTTCACTACTGTGAAGCTA+AGG | - | chr5.4:15178398-15178417 | MS.gene67548:intron | 40.0% | |
| TAAGATTCGCCCGTTACTTA+AGG | - | chr5.4:15180827-15180846 | MS.gene67548:CDS | 40.0% | |
| TAATACAGCACCTGCCATAA+TGG | - | chr5.4:15179878-15179897 | MS.gene67548:intron | 40.0% | |
| TAATCCCGTTGAAGAAGAAC+TGG | - | chr5.4:15178115-15178134 | MS.gene67548:CDS | 40.0% | |
| TAATGCAGGTACATGCAAGT+TGG | - | chr5.4:15183791-15183810 | MS.gene67548:CDS | 40.0% | |
| TACTGTGAAGCTAAGGTTGA+TGG | - | chr5.4:15178405-15178424 | MS.gene67548:intron | 40.0% | |
| TAGATGCACTCTTTCAACAG+AGG | + | chr5.4:15182611-15182630 | None:intergenic | 40.0% | |
| TCCGTGCAACTGATAAGAAA+GGG | - | chr5.4:15179943-15179962 | MS.gene67548:intron | 40.0% | |
| TCTTCTTCAACGGGATTAAC+AGG | + | chr5.4:15178113-15178132 | None:intergenic | 40.0% | |
| TGAAGTCTCGCTTTCCATTA+TGG | + | chr5.4:15179895-15179914 | None:intergenic | 40.0% | |
| TGATCATACAGCATACCACT+TGG | + | chr5.4:15182379-15182398 | None:intergenic | 40.0% | |
| TGGGTTCCTTGTCTAAGAAA+AGG | + | chr5.4:15181632-15181651 | None:intergenic | 40.0% | |
| TGTGACGAGTTTGTACTGAA+TGG | - | chr5.4:15180439-15180458 | MS.gene67548:CDS | 40.0% | |
| TTAAAGGGGAGAGTTGTCAA+AGG | + | chr5.4:15183896-15183915 | None:intergenic | 40.0% | |
| TTAGTGGTTTCAATCGCTTC+AGG | - | chr5.4:15181132-15181151 | MS.gene67548:intron | 40.0% | |
| TTCTGGCATTAAGCTTGTGA+CGG | - | chr5.4:15180079-15180098 | MS.gene67548:CDS | 40.0% | |
| TTGCCACATTCCAAAGAAGA+AGG | - | chr5.4:15182438-15182457 | MS.gene67548:CDS | 40.0% | |
| ! | AACTGCATTTTCTCTCACTC+TGG | - | chr5.4:15182190-15182209 | MS.gene67548:intron | 40.0% |
| ! | ACAGAGGTATGTGTTTGAAC+TGG | - | chr5.4:15183296-15183315 | MS.gene67548:intron | 40.0% |
| ! | ATAGCTTAGCCCACTCTTTT+AGG | + | chr5.4:15180420-15180439 | None:intergenic | 40.0% |
| ! | ATCTTTCAGGTGCATTGGAA+GGG | - | chr5.4:15180706-15180725 | MS.gene67548:CDS | 40.0% |
| ! | ATTGCATAATCTGGAACCTG+TGG | + | chr5.4:15182725-15182744 | None:intergenic | 40.0% |
| ! | CAACACTTTCAAGTGAATCC+GGG | - | chr5.4:15179913-15179932 | MS.gene67548:intron | 40.0% |
| ! | CCAGAAACACACGTATGTTT+TGG | - | chr5.4:15180257-15180276 | MS.gene67548:CDS | 40.0% |
| ! | CTAAGAACTCTGTCTTGTTC+TGG | + | chr5.4:15183213-15183232 | None:intergenic | 40.0% |
| ! | CTACACAAAGCACTTACATC+AGG | + | chr5.4:15179596-15179615 | None:intergenic | 40.0% |
| ! | GTGCTTGCTTGTCTTTTTAG+GGG | - | chr5.4:15182527-15182546 | MS.gene67548:intron | 40.0% |
| ! | GTTTTGTAGTGAATCGAGTG+AGG | - | chr5.4:15178356-15178375 | MS.gene67548:intron | 40.0% |
| ! | TAAAGAGGTTTTGCAATGGG+AGG | + | chr5.4:15182993-15183012 | None:intergenic | 40.0% |
| ! | TATCTTTCAGGTGCATTGGA+AGG | - | chr5.4:15180705-15180724 | MS.gene67548:CDS | 40.0% |
| ! | TCGGATGCGTGTTTTTCTTT+GGG | - | chr5.4:15181379-15181398 | MS.gene67548:CDS | 40.0% |
| ! | TTCGGATGCGTGTTTTTCTT+TGG | - | chr5.4:15181378-15181397 | MS.gene67548:CDS | 40.0% |
| ! | TTCTTTTGAGCTTCATCGAC+CGG | + | chr5.4:15178224-15178243 | None:intergenic | 40.0% |
| !! | AAAGAATGGGCTAGACAACT+TGG | + | chr5.4:15183923-15183942 | None:intergenic | 40.0% |
| !! | AAATTTGCTGGTGGCTTTCT+GGG | - | chr5.4:15181269-15181288 | MS.gene67548:intron | 40.0% |
| !! | AAGAATGGGCTAGACAACTT+GGG | + | chr5.4:15183922-15183941 | None:intergenic | 40.0% |
| !! | ACAACCTCATGAGTTGGTAA+TGG | + | chr5.4:15181547-15181566 | None:intergenic | 40.0% |
| !! | GGCCAAGCTGATTTTATTTG+TGG | - | chr5.4:15181089-15181108 | MS.gene67548:intron | 40.0% |
| !! | TGCTTGCTTGTCTTTTTAGG+GGG | - | chr5.4:15182528-15182547 | MS.gene67548:intron | 40.0% |
| !! | TTTTTAGGGGGCAAACTTCA+GGG | - | chr5.4:15182540-15182559 | MS.gene67548:intron | 40.0% |
| !!! | CCACTACCTTTTTTTTCCAC+AGG | - | chr5.4:15182706-15182725 | MS.gene67548:intron | 40.0% |
| !!! | CTTCCCTTCCATTTTGAGAT+TGG | - | chr5.4:15183482-15183501 | MS.gene67548:intron | 40.0% |
| ACCCCTTCTTTCACCTCTAA+TGG | - | chr5.4:15181010-15181029 | MS.gene67548:intron | 45.0% | |
| AGCGATGATGAAAGGAGCTA+TGG | - | chr5.4:15181907-15181926 | MS.gene67548:CDS | 45.0% | |
| CAATGGGAGGATAGCATAAG+TGG | + | chr5.4:15182980-15182999 | None:intergenic | 45.0% | |
| CAGGAACAAAAATGCGCCAT+TGG | - | chr5.4:15181151-15181170 | MS.gene67548:intron | 45.0% | |
| CCACAAAGCTTATAGCAGTC+TGG | + | chr5.4:15183267-15183286 | None:intergenic | 45.0% | |
| CCAGACTGCTATAAGCTTTG+TGG | - | chr5.4:15183264-15183283 | MS.gene67548:intron | 45.0% | |
| CCCCTTTCTTATCAGTTGCA+CGG | + | chr5.4:15179947-15179966 | None:intergenic | 45.0% | |
| CCGTGCAACTGATAAGAAAG+GGG | - | chr5.4:15179944-15179963 | MS.gene67548:intron | 45.0% | |
| CTCGATACAACCTCATGAGT+TGG | + | chr5.4:15181553-15181572 | None:intergenic | 45.0% | |
| CTGGATTTGTATTCTGGGTG+TGG | - | chr5.4:15180020-15180039 | MS.gene67548:CDS | 45.0% | |
| CTTATCAGTTGCACGGACAT+TGG | + | chr5.4:15179940-15179959 | None:intergenic | 45.0% | |
| CTTGCCCTTGGATACACATT+CGG | - | chr5.4:15183839-15183858 | MS.gene67548:CDS | 45.0% | |
| CTTTAACAAGCACTCCCTTG+AGG | + | chr5.4:15182567-15182586 | None:intergenic | 45.0% | |
| GAACAAAAATGCGCCATTGG+AGG | - | chr5.4:15181154-15181173 | MS.gene67548:intron | 45.0% | |
| GAATGTGTATCCAAGGGCAA+GGG | + | chr5.4:15183840-15183859 | None:intergenic | 45.0% | |
| GATGCACTCTTTCAACAGAG+GGG | + | chr5.4:15182609-15182628 | None:intergenic | 45.0% | |
| GATGGAGAAGAACCTGGAAA+TGG | + | chr5.4:15183191-15183210 | None:intergenic | 45.0% | |
| GCAATTCAAGGACTCTCTGA+TGG | - | chr5.4:15183866-15183885 | MS.gene67548:CDS | 45.0% | |
| GCGATGATGAAAGGAGCTAT+GGG | - | chr5.4:15181908-15181927 | MS.gene67548:CDS | 45.0% | |
| GGATAATTCATCCGACTCTG+AGG | - | chr5.4:15180531-15180550 | MS.gene67548:intron | 45.0% | |
| GTCCGTGCAACTGATAAGAA+AGG | - | chr5.4:15179942-15179961 | MS.gene67548:intron | 45.0% | |
| GTGGTATGCTGTATGATCAC+AGG | - | chr5.4:15182380-15182399 | MS.gene67548:intron | 45.0% | |
| TCAAGCTCGAATGGGAATGA+TGG | - | chr5.4:15181328-15181347 | MS.gene67548:intron | 45.0% | |
| TCCCATGTCATTCCATTTCC+AGG | - | chr5.4:15183176-15183195 | MS.gene67548:intron | 45.0% | |
| TCGTTCCTCGTTCTTCTCAA+CGG | - | chr5.4:15178069-15178088 | MS.gene67548:CDS | 45.0% | |
| TGAAAATTGTCAGCTGGCCA+AGG | - | chr5.4:15181731-15181750 | MS.gene67548:CDS | 45.0% | |
| TGCAGGTGATTAAGGACCAT+GGG | - | chr5.4:15179474-15179493 | MS.gene67548:intron | 45.0% | |
| TTCTTCCGTTGAGAAGAACG+AGG | + | chr5.4:15178077-15178096 | None:intergenic | 45.0% | |
| ! | AAATGCAGTTGCTGTTCCTG+TGG | - | chr5.4:15183814-15183833 | MS.gene67548:CDS | 45.0% |
| ! | AAGCAATGGCCTTACTTCAG+TGG | + | chr5.4:15181414-15181433 | None:intergenic | 45.0% |
| ! | AATGTTGTTTAGGGGGAGGA+AGG | - | chr5.4:15179271-15179290 | MS.gene67548:intron | 45.0% |
| ! | AGAAGCTGATGATGAAGCGA+TGG | - | chr5.4:15180510-15180529 | MS.gene67548:intron | 45.0% |
| ! | CGGATGCGTGTTTTTCTTTG+GGG | - | chr5.4:15181380-15181399 | MS.gene67548:CDS | 45.0% |
| ! | CTCACTCGTTCTTGGTGTAT+CGG | + | chr5.4:15178256-15178275 | None:intergenic | 45.0% |
| ! | GAACTCTGTCTTGTTCTGGA+TGG | + | chr5.4:15183209-15183228 | None:intergenic | 45.0% |
| ! | GAAGCTTGAGTGGACTTTAC+TGG | - | chr5.4:15180001-15180020 | MS.gene67548:intron | 45.0% |
| ! | GGAGATGTTTGAAACTCCTG+AGG | - | chr5.4:15179321-15179340 | MS.gene67548:intron | 45.0% |
| ! | GGCAGGTGCTGTATTAATCA+GGG | + | chr5.4:15179874-15179893 | None:intergenic | 45.0% |
| ! | GTTGAATGTTGTTTAGGGGG+AGG | - | chr5.4:15179267-15179286 | MS.gene67548:intron | 45.0% |
| ! | TGGCAGGTGCTGTATTAATC+AGG | + | chr5.4:15179875-15179894 | None:intergenic | 45.0% |
| !! | AATTTGCTGGTGGCTTTCTG+GGG | - | chr5.4:15181270-15181289 | MS.gene67548:intron | 45.0% |
| !! | ATCCGACTCTGAGGTATTTG+AGG | - | chr5.4:15180540-15180559 | MS.gene67548:intron | 45.0% |
| !! | CTTTTTAGGGGGCAAACTTC+AGG | - | chr5.4:15182539-15182558 | MS.gene67548:intron | 45.0% |
| !! | GAAATTTGCTGGTGGCTTTC+TGG | - | chr5.4:15181268-15181287 | MS.gene67548:intron | 45.0% |
| !! | TGACTTGAAGAAATGGGCTG+TGG | - | chr5.4:15180193-15180212 | MS.gene67548:intron | 45.0% |
| !! | TGCTTTGGAGCGTCTATTTC+TGG | - | chr5.4:15180062-15180081 | MS.gene67548:CDS | 45.0% |
| AACATACCTCAAGCCCTCGA+TGG | + | chr5.4:15180761-15180780 | None:intergenic | 50.0% | |
| ACATACCTCAAGCCCTCGAT+GGG | + | chr5.4:15180760-15180779 | None:intergenic | 50.0% | |
| ATGATGGCTGCAGGGTCATA+TGG | - | chr5.4:15181344-15181363 | MS.gene67548:intron | 50.0% | |
| CACGCATCCGAAATTGAGGA+AGG | + | chr5.4:15181370-15181389 | None:intergenic | 50.0% | |
| CCACTAACACCTTGACAAGG+TGG | + | chr5.4:15181119-15181138 | None:intergenic | 50.0% | |
| CGAATGTGTATCCAAGGGCA+AGG | + | chr5.4:15183841-15183860 | None:intergenic | 50.0% | |
| CGAGAGAATGCAAGGCTACA+AGG | - | chr5.4:15183237-15183256 | MS.gene67548:intron | 50.0% | |
| CTTCGTCGGAGAACCTATTC+CGG | - | chr5.4:15178202-15178221 | MS.gene67548:intron | 50.0% | |
| GAATGCTGGCAAAGAAGCTG+AGG | - | chr5.4:15180486-15180505 | MS.gene67548:intron | 50.0% | |
| GAATGGGAATGATGGCTGCA+GGG | - | chr5.4:15181336-15181355 | MS.gene67548:intron | 50.0% | |
| GACTCTCAAAGTGCACCAAG+TGG | - | chr5.4:15182361-15182380 | MS.gene67548:intron | 50.0% | |
| GAGCTCTTGCCACTGAAGTA+AGG | - | chr5.4:15181402-15181421 | MS.gene67548:CDS | 50.0% | |
| GCAAACTTCAGGGACCTCAA+GGG | - | chr5.4:15182550-15182569 | MS.gene67548:intron | 50.0% | |
| GCTGAACACAACAGGCCATT+TGG | - | chr5.4:15182849-15182868 | MS.gene67548:intron | 50.0% | |
| GGGCTCCCATGTATCATAAC+TGG | + | chr5.4:15180740-15180759 | None:intergenic | 50.0% | |
| GTCTCGCTTTCCATTATGGC+AGG | + | chr5.4:15179891-15179910 | None:intergenic | 50.0% | |
| GTGCAGGTGATTAAGGACCA+TGG | - | chr5.4:15179473-15179492 | MS.gene67548:intron | 50.0% | |
| GTGGTGAGACTTACAGGAAG+AGG | + | chr5.4:15180967-15180986 | None:intergenic | 50.0% | |
| TCCCACCAAAGTCGACCAAA+TGG | + | chr5.4:15182867-15182886 | None:intergenic | 50.0% | |
| TGAGCTTCATCGACCGGAAT+AGG | + | chr5.4:15178218-15178237 | None:intergenic | 50.0% | |
| TGAGGAGTGGTGAGACTTAC+AGG | + | chr5.4:15180973-15180992 | None:intergenic | 50.0% | |
| TTAGGGGGAGGAAGGAAAAG+AGG | - | chr5.4:15179279-15179298 | MS.gene67548:intron | 50.0% | |
| TTTGTGGCCCTGTCAAACAG+AGG | - | chr5.4:15183280-15183299 | MS.gene67548:intron | 50.0% | |
| ! | ACAGGCCATTTGGTCGACTT+TGG | - | chr5.4:15182859-15182878 | MS.gene67548:intron | 50.0% |
| ! | AGGAACGACGTCGTCTTGTT+TGG | + | chr5.4:15178057-15178076 | None:intergenic | 50.0% |
| ! | CCACCTTGTCAAGGTGTTAG+TGG | - | chr5.4:15181116-15181135 | MS.gene67548:intron | 50.0% |
| ! | GCCATTTGGTCGACTTTGGT+GGG | - | chr5.4:15182863-15182882 | MS.gene67548:intron | 50.0% |
| ! | GGCCAAGGCATTAAACCTTG+AGG | - | chr5.4:15181746-15181765 | MS.gene67548:CDS | 50.0% |
| ! | GTTCTGGATGGAGAAGAACC+TGG | + | chr5.4:15183197-15183216 | None:intergenic | 50.0% |
| ! | TCGTTCTTGGTGTATCGGTG+AGG | + | chr5.4:15178251-15178270 | None:intergenic | 50.0% |
| !! | ATGTCCACTGGCCTTTGCTT+TGG | - | chr5.4:15180047-15180066 | MS.gene67548:CDS | 50.0% |
| !! | TTTCTGGGGCGTTATGCTGT+GGG | - | chr5.4:15181284-15181303 | MS.gene67548:intron | 50.0% |
| AAGGGCCGAGCCTCATAATC+AGG | - | chr5.4:15182911-15182930 | MS.gene67548:intron | 55.0% | |
| AGTTGCACGGACATTGGACC+CGG | + | chr5.4:15179934-15179953 | None:intergenic | 55.0% | |
| CGAATGGGAATGATGGCTGC+AGG | - | chr5.4:15181335-15181354 | MS.gene67548:intron | 55.0% | |
| GATACATGGGAGCCCATCGA+GGG | - | chr5.4:15180745-15180764 | MS.gene67548:CDS | 55.0% | |
| GGCAAACTTCAGGGACCTCA+AGG | - | chr5.4:15182549-15182568 | MS.gene67548:intron | 55.0% | |
| TCCGACGAAGCATGCATCGT+CGG | + | chr5.4:15178192-15178211 | None:intergenic | 55.0% | |
| TCCGACGATGCATGCTTCGT+CGG | - | chr5.4:15178188-15178207 | MS.gene67548:intron | 55.0% | |
| TGATACATGGGAGCCCATCG+AGG | - | chr5.4:15180744-15180763 | MS.gene67548:CDS | 55.0% | |
| TTATGCTGTGGGCCGTCTAG+TGG | - | chr5.4:15181295-15181314 | MS.gene67548:intron | 55.0% | |
| ! | GGCCATTTGGTCGACTTTGG+TGG | - | chr5.4:15182862-15182881 | MS.gene67548:intron | 55.0% |
| !! | CTTTCTGGGGCGTTATGCTG+TGG | - | chr5.4:15181283-15181302 | MS.gene67548:intron | 55.0% |
| CGCTCCAAAGCAAAGGCCAG+TGG | + | chr5.4:15180054-15180073 | None:intergenic | 60.0% | |
| GGGTGTGGAGCTATGTCCAC+TGG | - | chr5.4:15180035-15180054 | MS.gene67548:CDS | 60.0% | |
| TATCCAAGGGCAAGGGCCAC+AGG | + | chr5.4:15183833-15183852 | None:intergenic | 60.0% | |
| !! | TGTGGTGGGCCACCTTGTCA+AGG | - | chr5.4:15181107-15181126 | MS.gene67548:intron | 60.0% |
| GTTCCTGTGGCCCTTGCCCT+TGG | - | chr5.4:15183827-15183846 | MS.gene67548:CDS | 65.0% | |
| GGGAGCCCATCGAGGGCTTG+AGG | - | chr5.4:15180752-15180771 | MS.gene67548:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 15178026 | 15183973 | 15178026 | ID=MS.gene67548 |
| chr5.4 | mRNA | 15178026 | 15183973 | 15178026 | ID=MS.gene67548.t1;Parent=MS.gene67548 |
| chr5.4 | exon | 15183729 | 15183973 | 15183729 | ID=MS.gene67548.t1.exon1;Parent=MS.gene67548.t1 |
| chr5.4 | CDS | 15183729 | 15183973 | 15183729 | ID=cds.MS.gene67548.t1;Parent=MS.gene67548.t1 |
| chr5.4 | exon | 15183535 | 15183634 | 15183535 | ID=MS.gene67548.t1.exon2;Parent=MS.gene67548.t1 |
| chr5.4 | CDS | 15183535 | 15183634 | 15183535 | ID=cds.MS.gene67548.t1;Parent=MS.gene67548.t1 |
| chr5.4 | exon | 15182609 | 15182716 | 15182609 | ID=MS.gene67548.t1.exon3;Parent=MS.gene67548.t1 |
| chr5.4 | CDS | 15182609 | 15182716 | 15182609 | ID=cds.MS.gene67548.t1;Parent=MS.gene67548.t1 |
| chr5.4 | exon | 15182401 | 15182520 | 15182401 | ID=MS.gene67548.t1.exon4;Parent=MS.gene67548.t1 |
| chr5.4 | CDS | 15182401 | 15182520 | 15182401 | ID=cds.MS.gene67548.t1;Parent=MS.gene67548.t1 |
| chr5.4 | exon | 15182214 | 15182304 | 15182214 | ID=MS.gene67548.t1.exon5;Parent=MS.gene67548.t1 |
| chr5.4 | CDS | 15182214 | 15182304 | 15182214 | ID=cds.MS.gene67548.t1;Parent=MS.gene67548.t1 |
| chr5.4 | exon | 15181899 | 15182113 | 15181899 | ID=MS.gene67548.t1.exon6;Parent=MS.gene67548.t1 |
| chr5.4 | CDS | 15181899 | 15182113 | 15181899 | ID=cds.MS.gene67548.t1;Parent=MS.gene67548.t1 |
| chr5.4 | exon | 15181731 | 15181796 | 15181731 | ID=MS.gene67548.t1.exon7;Parent=MS.gene67548.t1 |
| chr5.4 | CDS | 15181731 | 15181796 | 15181731 | ID=cds.MS.gene67548.t1;Parent=MS.gene67548.t1 |
| chr5.4 | exon | 15181369 | 15181617 | 15181369 | ID=MS.gene67548.t1.exon8;Parent=MS.gene67548.t1 |
| chr5.4 | CDS | 15181369 | 15181617 | 15181369 | ID=cds.MS.gene67548.t1;Parent=MS.gene67548.t1 |
| chr5.4 | exon | 15181226 | 15181284 | 15181226 | ID=MS.gene67548.t1.exon9;Parent=MS.gene67548.t1 |
| chr5.4 | CDS | 15181226 | 15181284 | 15181226 | ID=cds.MS.gene67548.t1;Parent=MS.gene67548.t1 |
| chr5.4 | exon | 15181027 | 15181093 | 15181027 | ID=MS.gene67548.t1.exon10;Parent=MS.gene67548.t1 |
| chr5.4 | CDS | 15181027 | 15181093 | 15181027 | ID=cds.MS.gene67548.t1;Parent=MS.gene67548.t1 |
| chr5.4 | exon | 15180581 | 15180910 | 15180581 | ID=MS.gene67548.t1.exon11;Parent=MS.gene67548.t1 |
| chr5.4 | CDS | 15180581 | 15180910 | 15180581 | ID=cds.MS.gene67548.t1;Parent=MS.gene67548.t1 |
| chr5.4 | exon | 15180402 | 15180470 | 15180402 | ID=MS.gene67548.t1.exon12;Parent=MS.gene67548.t1 |
| chr5.4 | CDS | 15180402 | 15180470 | 15180402 | ID=cds.MS.gene67548.t1;Parent=MS.gene67548.t1 |
| chr5.4 | exon | 15180208 | 15180294 | 15180208 | ID=MS.gene67548.t1.exon13;Parent=MS.gene67548.t1 |
| chr5.4 | CDS | 15180208 | 15180294 | 15180208 | ID=cds.MS.gene67548.t1;Parent=MS.gene67548.t1 |
| chr5.4 | exon | 15180020 | 15180107 | 15180020 | ID=MS.gene67548.t1.exon14;Parent=MS.gene67548.t1 |
| chr5.4 | CDS | 15180020 | 15180107 | 15180020 | ID=cds.MS.gene67548.t1;Parent=MS.gene67548.t1 |
| chr5.4 | exon | 15179540 | 15179658 | 15179540 | ID=MS.gene67548.t1.exon15;Parent=MS.gene67548.t1 |
| chr5.4 | CDS | 15179540 | 15179658 | 15179540 | ID=cds.MS.gene67548.t1;Parent=MS.gene67548.t1 |
| chr5.4 | exon | 15179351 | 15179452 | 15179351 | ID=MS.gene67548.t1.exon16;Parent=MS.gene67548.t1 |
| chr5.4 | CDS | 15179351 | 15179452 | 15179351 | ID=cds.MS.gene67548.t1;Parent=MS.gene67548.t1 |
| chr5.4 | exon | 15179228 | 15179271 | 15179228 | ID=MS.gene67548.t1.exon17;Parent=MS.gene67548.t1 |
| chr5.4 | CDS | 15179228 | 15179271 | 15179228 | ID=cds.MS.gene67548.t1;Parent=MS.gene67548.t1 |
| chr5.4 | exon | 15179067 | 15179136 | 15179067 | ID=MS.gene67548.t1.exon18;Parent=MS.gene67548.t1 |
| chr5.4 | CDS | 15179067 | 15179136 | 15179067 | ID=cds.MS.gene67548.t1;Parent=MS.gene67548.t1 |
| chr5.4 | exon | 15178698 | 15178801 | 15178698 | ID=MS.gene67548.t1.exon19;Parent=MS.gene67548.t1 |
| chr5.4 | CDS | 15178698 | 15178801 | 15178698 | ID=cds.MS.gene67548.t1;Parent=MS.gene67548.t1 |
| chr5.4 | exon | 15178026 | 15178200 | 15178026 | ID=MS.gene67548.t1.exon20;Parent=MS.gene67548.t1 |
| chr5.4 | CDS | 15178026 | 15178200 | 15178026 | ID=cds.MS.gene67548.t1;Parent=MS.gene67548.t1 |
| Gene Sequence |
| Protein sequence |
