AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene67548


Find 184 sgRNAs with CRISPR-Local

Find 383 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-GE



Chromosome Type Strat End Strand Name
chr5.4 gene 15178026 15183973 15178026 ID=MS.gene67548
chr5.4 mRNA 15178026 15183973 15178026 ID=MS.gene67548.t1;Parent=MS.gene67548
chr5.4 exon 15183729 15183973 15183729 ID=MS.gene67548.t1.exon1;Parent=MS.gene67548.t1
chr5.4 CDS 15183729 15183973 15183729 ID=cds.MS.gene67548.t1;Parent=MS.gene67548.t1
chr5.4 exon 15183535 15183634 15183535 ID=MS.gene67548.t1.exon2;Parent=MS.gene67548.t1
chr5.4 CDS 15183535 15183634 15183535 ID=cds.MS.gene67548.t1;Parent=MS.gene67548.t1
chr5.4 exon 15182609 15182716 15182609 ID=MS.gene67548.t1.exon3;Parent=MS.gene67548.t1
chr5.4 CDS 15182609 15182716 15182609 ID=cds.MS.gene67548.t1;Parent=MS.gene67548.t1
chr5.4 exon 15182401 15182520 15182401 ID=MS.gene67548.t1.exon4;Parent=MS.gene67548.t1
chr5.4 CDS 15182401 15182520 15182401 ID=cds.MS.gene67548.t1;Parent=MS.gene67548.t1
chr5.4 exon 15182214 15182304 15182214 ID=MS.gene67548.t1.exon5;Parent=MS.gene67548.t1
chr5.4 CDS 15182214 15182304 15182214 ID=cds.MS.gene67548.t1;Parent=MS.gene67548.t1
chr5.4 exon 15181899 15182113 15181899 ID=MS.gene67548.t1.exon6;Parent=MS.gene67548.t1
chr5.4 CDS 15181899 15182113 15181899 ID=cds.MS.gene67548.t1;Parent=MS.gene67548.t1
chr5.4 exon 15181731 15181796 15181731 ID=MS.gene67548.t1.exon7;Parent=MS.gene67548.t1
chr5.4 CDS 15181731 15181796 15181731 ID=cds.MS.gene67548.t1;Parent=MS.gene67548.t1
chr5.4 exon 15181369 15181617 15181369 ID=MS.gene67548.t1.exon8;Parent=MS.gene67548.t1
chr5.4 CDS 15181369 15181617 15181369 ID=cds.MS.gene67548.t1;Parent=MS.gene67548.t1
chr5.4 exon 15181226 15181284 15181226 ID=MS.gene67548.t1.exon9;Parent=MS.gene67548.t1
chr5.4 CDS 15181226 15181284 15181226 ID=cds.MS.gene67548.t1;Parent=MS.gene67548.t1
chr5.4 exon 15181027 15181093 15181027 ID=MS.gene67548.t1.exon10;Parent=MS.gene67548.t1
chr5.4 CDS 15181027 15181093 15181027 ID=cds.MS.gene67548.t1;Parent=MS.gene67548.t1
chr5.4 exon 15180581 15180910 15180581 ID=MS.gene67548.t1.exon11;Parent=MS.gene67548.t1
chr5.4 CDS 15180581 15180910 15180581 ID=cds.MS.gene67548.t1;Parent=MS.gene67548.t1
chr5.4 exon 15180402 15180470 15180402 ID=MS.gene67548.t1.exon12;Parent=MS.gene67548.t1
chr5.4 CDS 15180402 15180470 15180402 ID=cds.MS.gene67548.t1;Parent=MS.gene67548.t1
chr5.4 exon 15180208 15180294 15180208 ID=MS.gene67548.t1.exon13;Parent=MS.gene67548.t1
chr5.4 CDS 15180208 15180294 15180208 ID=cds.MS.gene67548.t1;Parent=MS.gene67548.t1
chr5.4 exon 15180020 15180107 15180020 ID=MS.gene67548.t1.exon14;Parent=MS.gene67548.t1
chr5.4 CDS 15180020 15180107 15180020 ID=cds.MS.gene67548.t1;Parent=MS.gene67548.t1
chr5.4 exon 15179540 15179658 15179540 ID=MS.gene67548.t1.exon15;Parent=MS.gene67548.t1
chr5.4 CDS 15179540 15179658 15179540 ID=cds.MS.gene67548.t1;Parent=MS.gene67548.t1
chr5.4 exon 15179351 15179452 15179351 ID=MS.gene67548.t1.exon16;Parent=MS.gene67548.t1
chr5.4 CDS 15179351 15179452 15179351 ID=cds.MS.gene67548.t1;Parent=MS.gene67548.t1
chr5.4 exon 15179228 15179271 15179228 ID=MS.gene67548.t1.exon17;Parent=MS.gene67548.t1
chr5.4 CDS 15179228 15179271 15179228 ID=cds.MS.gene67548.t1;Parent=MS.gene67548.t1
chr5.4 exon 15179067 15179136 15179067 ID=MS.gene67548.t1.exon18;Parent=MS.gene67548.t1
chr5.4 CDS 15179067 15179136 15179067 ID=cds.MS.gene67548.t1;Parent=MS.gene67548.t1
chr5.4 exon 15178698 15178801 15178698 ID=MS.gene67548.t1.exon19;Parent=MS.gene67548.t1
chr5.4 CDS 15178698 15178801 15178698 ID=cds.MS.gene67548.t1;Parent=MS.gene67548.t1
chr5.4 exon 15178026 15178200 15178026 ID=MS.gene67548.t1.exon20;Parent=MS.gene67548.t1
chr5.4 CDS 15178026 15178200 15178026 ID=cds.MS.gene67548.t1;Parent=MS.gene67548.t1
Gene Sequence

>MS.gene67548

ATGCCTAAAAAACGCGTTCGTAAATCTTCCAAACAAGACGACGTCGTTCCTCGTTCTTCTCAACGGAAGAAATCCAAAAAATCTCCTGTTAATCCCGTTGAAGAAGAACTGGTTTCTCTTCTTCCTTCTAGAAGAAAGAAAGCGAAGCAATCTTCTGTTAACTCCGACGATGCATGCTTCGTCGGAGAACCTATTCCGGTCGATGAAGCTCAAAAGAAATGGCCTCACCGATACACCAAGAACGAGTGAGTTTTCTATTTTTAATTTTTATTTTTTAATTTTTTTTTGTTGTTTTACTGCAAGATTTAACATTCACTGCTATGTGATTGTGTTTTGTAGTGAATCGAGTGAGGATGAAAGTTTGAAGGCGAAGTTTCACTACTGTGAAGCTAAGGTTGATGGAATTTTATATAAGCTGGAGGATAATGCTTATGTCAAGGTTTCTATTCTATTTCATATGATGTTCATAAATTTCTGTTTTTGATTTCTTGTTGAAAATTTGATGTTTTAGGGTTTATTTCTTTGATTGCATGTTGGCAACTGTGTTTTTATGTTATTTTGTTTGATTTTATGTTGTGAATTTTCTGCTTTAGGGTTTATTCATATGATTTCGTGTTGAAAATTGGGTTTTAGTGTTTATTTCTTTTATTCTGTTTCTATTTTATTTATGTTGAAAATTTTGATTTTGATTTTTTTGCATGTTGGAAATTCTGTTTCTATTTTATTTATGTTGAAAATTGAGTTTTTTTTTAATTTTTTTTATGGTTCATTGGTTTGAATTTCATGTTGAAAACTGTGTTTTATGGTTCATTTCTTTGATTTGGTGATGGAAATTATGTTTTTTATTTTTGAGTCATGTTGAAATTTTGGTTTTAGGTTCCTTTCTTTTGATTTAATGTTGAAAATTGTGTTTTTGGATTCATTTCTTTGATTTGGTGTTGGAAATTATGTTTTGTATTCTTTGATTTCATGTTGATAATTTGGTTTTAGGTTCCTTTTATTTGATATCATGTTGAAAACTGTGTTTTAGGATTCATTTCTTTGATTTGGTGGTGGAGATTATGTTTTGTGCTTTTTTATTTCATGTTGAAAATTTGGTTTTAGGCTCCTTTTATTTGATTTAATGTTGAAAATTGTGTTTTAGGATTCATTTCTTTGATTTCATGCTGAATACTGTGTTGTTTGGGTTTATTGATTTGGTGCTACTTTTTACTAGAGTTTTGATTTTACTGTGTTTGTTTGTTGAATGTTGTTTAGGGGGAGGAAGGAAAAGAGGATTACATTGCTACGATTGTGGAGATGTTTGAAACTCCTGAGGAAGAACAATATTTTACTGCTCAATGGTTTTACAGAGCCGAAGACACTGTAAATATTGAATTTTAACTCTTGTGTTTTGGGTTTGTTTAGCTGTTTAGGGTTATTGTTGATTTTGGTAATTTGAATGTGTGTGCAGGTGATTAAGGACCATGGGAATCTAGTTGACAAAAAGAGGATTTTCAAATCTGATGTAAAAGATGAAAATCCTTTAGATTGTTTAGTTAGGAAAATAAACATTGTACAAATTTCTCCTGATGTAAGTGCTTTGTGTAGTTCTTCTTTTGTTGTATAACTTATAATTTTGCATCATAATGTTCAGAGTTTTGAAATATGTTGATTTTGTTTACTACAGGCTGCAAAAAAGAAGAAAATTCCTCCTTGTGACTTCTATTTTGATATGAAGTACACGGTGCCATATTTAACTTTTGCTAACATTGACAATGGTATGATTTCATAAATTAATTATGATGATTTGCTTTAGTTTCTTGCATGTAGCTTTACCAAATTTTTTATGTTGATTGTGGTTTGCCCTGATTAATACAGCACCTGCCATAATGGAAAGCGAGACTTCAACACTTTCAAGTGAATCCGGGTCCAATGTCCGTGCAACTGATAAGAAAGGGGTTAAAGAAAAACCAACTCAAATTAAAGAATCTAAGAAGCTTGAGTGGACTTTACTGGATTTGTATTCTGGGTGTGGAGCTATGTCCACTGGCCTTTGCTTTGGAGCGTCTATTTCTGGCATTAAGCTTGTGACGGTATTTAGACTAATTTGCATAATGTTTCTTTGGTTCATTTTAACTTTGCTGGTAAATAATATTTCTACTGATTTTATAATCTTGGTTGTTTTTGACTTGAAGAAATGGGCTGTGGATATAAATGAATATGCTTGCGAGAGTCTAAAGCTGAATCACCCAGAAACACACGTATGTTTTGGTGTTATTCTGTAGTTGATGTCTGTCATTGTAACTTTTTTCATAGTTCTTCATTATTATTCTTATTAACATGCATGTATTGCTTCCCGAAATGTTAAATTCAGGTGAGGAATGAACCCACAGAAGACTTTTTAAGTCTCCTAAAAGAGTGGGCTAAGCTATGTGACGAGTTTGTACTGAATGGAGCAGAAAGTACAGATTCTGATTTGAATGCTGGCAAAGAAGCTGAGGAAGAAGCTGATGATGAAGCGATGGATAATTCATCCGACTCTGAGGTATTTGAGGTTGAAAAACTACTCTCTATCTGCTATGGTGATCCCAATGAAGATGAAAAACCAGGACTTTATTTTAAAGTAAGTTTTCTTGCCTTATTGTGTAGTTAATTATTATCAGCTAGTGGTCATTAATTTTTATGCTATAAATTTCTTATCTTTCAGGTGCATTGGAAGGGTTACGATTCCAGTTATGATACATGGGAGCCCATCGAGGGCTTGAGGTATGTTCCAATTATCAAGATATTGACTATTGTTCCCCTAACTTTGCTTTACTTAAGATTCGCCCGTTACTTAAGGCTTATAGCTAATTATATGCAAGATTCTAAGTTCTAACTGTGATTATTATTTAACAGCGAGTGTAAAGATGCTATGAAAGATTTTGTTATAAATGGATATAAGGAAAAGATACTGCCTCTTCCTGTAAGTCTCACCACTCCTCATTATTGACTTGTACTCAACCCCTTCTTTCACCTCTAATGGTTTATCAATTCTCTGTTATTCATTAAAATGATCTGTACTACTTTATGCTCGTACAGGGCCAAGCTGATTTTATTTGTGGTGGGCCACCTTGTCAAGGTGTTAGTGGTTTCAATCGCTTCAGGAACAAAAATGCGCCATTGGAGGATGAAAAAAATAAGCAATTAATTGTTTACATGAACATTATTGATTTCTTGAAGCCTAAGTATGTTCTGATGGAGAATGTTGTAGACATTTTGAAATTTGCTGGTGGCTTTCTGGGGCGTTATGCTGTGGGCCGTCTAGTGGCCATGAATTATCAAGCTCGAATGGGAATGATGGCTGCAGGGTCATATGGCCTTCCTCAATTTCGGATGCGTGTTTTTCTTTGGGGAGCTCTTGCCACTGAAGTAAGGCCATTGCTTATAGTACTAGTTTTTTATTTTGTTGTGTTATTTAAGTTACTATCTAAATATTTTTAAATGGAAGGCTAATGATTTATCATCTTTTCTGTCTGTAGAAATTACCGTCATATCCATTACCAACTCATGAGGTTGTATCGAGATCAGTCATCCCCACTGAGTTTGAAGTAAGAACTGATAGAAATAGAGATGTTTGTGCCTTTTCTTAGACAAGGAACCCATGTTGTGATAGTAAAGTTCTAATCAATGTGATCTGGGTACTTTTATAATGCAGGAAATTACAGTTGCATATTCCACTAATGAAAATTGTCAGCTGGCCAAGGCATTAAACCTTGAGGATGCAATTAATGATCTCCCTCCAGTATGTTGATTTTGTTCACCAATACATTGTGAATATAGTTTGTTTAATTCTTATAAAATTTTGATTCCACTTCTTTACTCGGGTTTCTTTTATCAAACAGGTTGAAAATGATGATAGCGATGATGAAAGGAGCTATGGGACTACTCCTCGTACTGATTTTCAAAAATATATCAGATTAAAGAGAAGTGGTAAGTTTTGTATTGATTTTTGAGTTTTGAAGTAGTCTTGGTTGTTTGCTTTTTTAATACTCTGTTGTCATTGCAATGAAAGATGTCAGCAGTTTTTTATGAATGAATGTTTTATCTTTCAATGTGTTCATACTAAATATCAAGCTTACCTAGAGTAAGATTCATACAATCTCTATTTATCAGCTAAAATGTACTGGCTGCATAAATATGAACTGCATTTTCTCTCACTCTGGTCTTTTTTATAACTAGAATTGTGTATGTGGTCATTGCATGTTGTTACATGTCACATGGTTAGAAAATCTGTCTTGCTTCCTTCATCATTAAACTGAACGGGTGTTGAATCTTGTGTTTTCTACTCCAGAGATGGTGAATTATTCTGCTGACTCTCAAAGTGCACCAAGTGGTATGCTGTATGATCACAGGCCTTTGAAATTAAATACCGATGACTATGAGAGAGTTTGCCACATTCCAAAGAAGAAGGTATCATATCTTGAATTGATGTTATGTATTGTTATTTTATCTTTGTTGCTCTATGTAAATTTTAGTTGTGCTTGCTTGTCTTTTTAGGGGGCAAACTTCAGGGACCTCAAGGGAGTGCTTGTTAAAGAAAACAAAGTGGAATGGGACCCCTCTGTTGAAAGAGTGCATCTAAAATCTGGAAAGCCTTTGGTACTAATCTTGTCTTGTCTTAGGGACAAATTTATTTTGAAGTTAGTTCTTTGTTGACCACTACCTTTTTTTTCCACAGGTTCCAGATTATGCAATGACATTTGTTCGTGGGACCTCTTCTAAGTATGTATATATGTACATCTATTTTAGGTCATCATATTTTATGTCTATTTCATCTATATTAAAGTTCTTATGTATCTGCTGAACACAACAGGCCATTTGGTCGACTTTGGTGGGATGAAATTGTGTCTACTGTTGTAACAAGGGCCGAGCCTCATAATCAGGTTATTGTTTGAAGTTGAGTACATTATATTTTGTAAAACTAATGCCACTTATGCTATCCTCCCATTGCAAAACCTCTTTAAAACAATGTTGTATATGAGAAATGTTATTGACCTCAGGATTATCATGTTAGCATTTTTTCAATTAAACTCATCTGACCATGTTCTTTGTTTGGACTCGTTGTGCAAGTTGCAGTACTTATTTCAATTGTTTTCTTTTTCATTTCTGATTTCGCATTTTCTCAATCCCATGTCATTCCATTTCCAGGTTCTTCTCCATCCAGAACAAGACAGAGTTCTTAGTATTCGAGAGAATGCAAGGCTACAAGGATTTCCAGACTGCTATAAGCTTTGTGGCCCTGTCAAACAGAGGTATGTGTTTGAACTGGTATCTTATCTTGAGTTAATTAATGAAAGATATAAGCAGAATTTTGTTGTTAGAAAACTTTTATAGCCTTGCATCCACCAATTTTCTAATATCTATGATTTAAGATAATACACAATATTTTATCATATGAAGTATTTAGAGACAAGGATGGCTGAATGTTCAGTCTTCCCTTCCATTTTGAGATTGGAATCTGTTCCTTCCAATTCCTTAACCAACAATTGATTAACCTATTATAACTAACTTCCATATTTATTACTAAATTGCACAACTGCTCAATAACTCTCCTATGGGATCAGTAAAGAACTTTTAGGTGTAATATTTCTTATTGGTCTAACAATATGGTTAGAAAGATTGCTAAATGTAGAAGACTAAAGTAGTTATAGTTTGAGATTAGTTATTAACATTTTCTATCTTTCACTATAATATTTTTTTCCCATCATTATGTATAGCATGGCACTCAATAGTTACATCTTTAATGCAGGTACATGCAAGTTGGAAATGCAGTTGCTGTTCCTGTGGCCCTTGCCCTTGGATACACATTCGGTTTAGCAATTCAAGGACTCTCTGATGGCAGTCCTTTGACAACTCTCCCCTTTAAGTACCCAAGTTGTCTAGCCCATTCTTTAGATGTAGTTGATGATGATGGCTCAAGCTGA

Protein sequence

>MS.gene67548.t1

MPKKRVRKSSKQDDVVPRSSQRKKSKKSPVNPVEEELVSLLPSRRKKAKQSSVNSDDACFVGEPIPVDEAQKKWPHRYTKNDESSEDESLKAKFHYCEAKVDGILYKLEDNAYVKGEEGKEDYIATIVEMFETPEEEQYFTAQWFYRAEDTVIKDHGNLVDKKRIFKSDVKDENPLDCLVRKINIVQISPDAAKKKKIPPCDFYFDMKYTVPYLTFANIDNAPAIMESETSTLSSESGSNVRATDKKGVKEKPTQIKESKKLEWTLLDLYSGCGAMSTGLCFGASISGIKLVTKWAVDINEYACESLKLNHPETHVRNEPTEDFLSLLKEWAKLCDEFVLNGAESTDSDLNAGKEAEEEADDEAMDNSSDSEVFEVEKLLSICYGDPNEDEKPGLYFKVHWKGYDSSYDTWEPIEGLSECKDAMKDFVINGYKEKILPLPGQADFICGGPPCQGVSGFNRFRNKNAPLEDEKNKQLIVYMNIIDFLKPKYVLMENVVDILKFAGGFLGRYAVGRLVAMNYQARMGMMAAGSYGLPQFRMRVFLWGALATEKLPSYPLPTHEVVSRSVIPTEFEEITVAYSTNENCQLAKALNLEDAINDLPPVENDDSDDERSYGTTPRTDFQKYIRLKRSEMVNYSADSQSAPSGMLYDHRPLKLNTDDYERVCHIPKKKGANFRDLKGVLVKENKVEWDPSVERVHLKSGKPLVPDYAMTFVRGTSSKPFGRLWWDEIVSTVVTRAEPHNQVLLHPEQDRVLSIRENARLQGFPDCYKLCGPVKQRYMQVGNAVAVPVALALGYTFGLAIQGLSDGSPLTTLPFKYPSCLAHSLDVVDDDGSS