AlfalfaGEDB | MS.gene049622

M. sativa cultivar XinJiangDaYe / MS.gene049622

KEGG: K01520
GO: GO:0000287 GO:0003674 GO:0003824 GO:0004170 GO:0005488 GO:0006139 GO:0006220 GO:0006221 GO:0006226 GO:0006244 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009058 GO:0009117 GO:0009123 GO:0009124 GO:0009129 GO:0009130 GO:0009141 GO:0009143 GO:0009147 GO:0009149 GO:0009157 GO:0009162 GO:0009165 GO:0009166 GO:0009176 GO:0009177 GO:0009200 GO:0009204 GO:0009211 GO:0009213 GO:0009219 GO:0009221 GO:0009223 GO:0009262 GO:0009263 GO:0009264 GO:0009265 GO:0009394 GO:0009987 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0018130 GO:0019438 GO:0019439 GO:0019637 GO:0019692 GO:0034404 GO:0034641 GO:0034654 GO:0034655 GO:0043167 GO:0043169 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044270 GO:0044271 GO:0044281 GO:0044283 GO:0046078 GO:0046080 GO:0046081 GO:0046385 GO:0046386 GO:0046434 GO:0046483 GO:0046700 GO:0046872 GO:0047429 GO:0055086 GO:0071704 GO:0072527 GO:0072528 GO:0072529 GO:0090407 GO:1901135 GO:1901136 GO:1901137 GO:1901292 GO:1901293 GO:1901360 GO:1901361 GO:1901362 GO:1901564 GO:1901565 GO:1901566 GO:1901575 GO:1901576
PFAM: PF00692.22

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene049622.t1	RHN67997.1	98.7	150	2	0	1	150	38	187	1.00E-74	289.3

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene049622.t1	Q9STG6	87.9	141	17	0	10	150	26	166	1.7e-65	250.0

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene049622.t1	A0A072UXL1	98.7	150	2	0	1	150	1	150	7.5e-75	289.3

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049622	MS.gene049989	0.832135	1.12E-55	-1.69E-46
MS.gene049622	MS.gene050297	0.812967	3.25E-51	-1.69E-46
MS.gene049622	MS.gene051263	0.831813	1.35E-55	-1.69E-46
MS.gene049622	MS.gene052367	0.820263	7.52E-53	-1.69E-46
MS.gene049622	MS.gene053417	0.801297	9.62E-49	-1.69E-46
MS.gene049622	MS.gene055957	0.871183	8.30E-67	-1.69E-46
MS.gene049622	MS.gene056041	0.84465	6.63E-59	-1.69E-46
MS.gene049622	MS.gene056042	0.800461	1.43E-48	-1.69E-46
MS.gene049622	MS.gene056335	0.825667	4.14E-54	-1.69E-46
MS.gene049622	MS.gene057458	0.818625	1.78E-52	-1.69E-46
MS.gene049622	MS.gene058196	0.815477	9.06E-52	-1.69E-46
MS.gene049622	MS.gene058197	0.81594	7.14E-52	-1.69E-46
MS.gene049622	MS.gene058198	0.815484	9.03E-52	-1.69E-46
MS.gene049622	MS.gene059300	0.80208	6.65E-49	-1.69E-46
MS.gene049622	MS.gene060473	0.836227	1.06E-56	-1.69E-46
MS.gene049622	MS.gene060565	0.836437	9.37E-57	-1.69E-46
MS.gene049622	MS.gene06057	0.805361	1.39E-49	-1.69E-46
MS.gene049622	MS.gene061099	0.804133	2.50E-49	-1.69E-46
MS.gene049622	MS.gene061260	0.831771	1.38E-55	-1.69E-46
MS.gene049622	MS.gene061275	0.826428	2.73E-54	-1.69E-46
MS.gene049622	MS.gene061805	0.809579	1.76E-50	-1.69E-46
MS.gene049622	MS.gene062855	0.801329	9.48E-49	-1.69E-46
MS.gene049622	MS.gene063035	0.81794	2.54E-52	-1.69E-46
MS.gene049622	MS.gene063037	0.815401	9.42E-52	-1.69E-46
MS.gene049622	MS.gene063095	0.811877	5.62E-51	-1.69E-46
MS.gene049622	MS.gene064081	0.811821	5.78E-51	-1.69E-46
MS.gene049622	MS.gene067143	0.810429	1.16E-50	-1.69E-46
MS.gene049622	MS.gene067144	0.810648	1.04E-50	-1.69E-46
MS.gene049622	MS.gene07028	0.811642	6.32E-51	-1.69E-46
MS.gene049622	MS.gene072956	0.808619	2.83E-50	-1.69E-46
MS.gene049622	MS.gene072963	0.800606	1.33E-48	-1.69E-46
MS.gene049622	MS.gene07425	0.811075	8.39E-51	-1.69E-46
MS.gene049622	MS.gene08836	0.849115	3.98E-60	-1.69E-46
MS.gene049622	MS.gene08860	0.800106	1.68E-48	-1.69E-46
MS.gene049622	MS.gene08988	0.814663	1.37E-51	-1.69E-46
MS.gene049622	MS.gene09014	0.838631	2.56E-57	-1.69E-46
MS.gene049622	MS.gene09234	0.827032	1.96E-54	-1.69E-46
MS.gene049622	MS.gene09258	0.832978	6.94E-56	-1.69E-46
MS.gene049622	MS.gene09275	0.802937	4.43E-49	-1.69E-46
MS.gene049622	MS.gene09540	0.849272	3.60E-60	-1.69E-46
MS.gene049622	MS.gene09543	0.852333	4.94E-61	-1.69E-46
MS.gene049622	MS.gene09594	0.811851	5.69E-51	-1.69E-46
MS.gene049622	MS.gene20224	0.801673	8.06E-49	-1.69E-46
MS.gene049622	MS.gene21320	0.80571	1.17E-49	-1.69E-46
MS.gene049622	MS.gene22500	0.801868	7.35E-49	-1.69E-46
MS.gene049622	MS.gene23323	0.856006	4.31E-62	-1.69E-46
MS.gene049622	MS.gene23980	0.813721	2.22E-51	-1.69E-46
MS.gene049622	MS.gene24543	0.804724	1.88E-49	-1.69E-46
MS.gene049622	MS.gene24699	0.818515	1.88E-52	-1.69E-46
MS.gene049622	MS.gene24735	0.80344	3.48E-49	-1.69E-46
MS.gene049622	MS.gene24830	0.801838	7.45E-49	-1.69E-46
MS.gene049622	MS.gene26114	0.806243	9.04E-50	-1.69E-46
MS.gene049622	MS.gene26224	0.810996	8.73E-51	-1.69E-46
MS.gene049622	MS.gene26665	0.812286	4.58E-51	-1.69E-46
MS.gene049622	MS.gene27274	0.811983	5.33E-51	-1.69E-46
MS.gene049622	MS.gene28050	0.815919	7.22E-52	-1.69E-46
MS.gene049622	MS.gene28787	0.801214	1.00E-48	-1.69E-46
MS.gene049622	MS.gene28867	0.842392	2.66E-58	-1.69E-46
MS.gene049622	MS.gene32263	0.806487	8.03E-50	-1.69E-46
MS.gene049622	MS.gene32703	0.847113	1.42E-59	-1.69E-46
MS.gene049622	MS.gene32920	0.802562	5.29E-49	-1.69E-46
MS.gene049622	MS.gene33688	0.810828	9.49E-51	-1.69E-46
MS.gene049622	MS.gene35150	0.823924	1.07E-53	-1.69E-46
MS.gene049622	MS.gene35715	0.822095	2.85E-53	-1.69E-46
MS.gene049622	MS.gene36485	0.818775	1.64E-52	-1.69E-46
MS.gene049622	MS.gene37573	0.810986	8.77E-51	-1.69E-46
MS.gene049622	MS.gene38688	0.821338	4.26E-53	-1.69E-46
MS.gene049622	MS.gene39058	0.832326	1.01E-55	-1.69E-46
MS.gene049622	MS.gene40405	0.824366	8.39E-54	-1.69E-46
MS.gene049622	MS.gene42286	0.80318	3.94E-49	-1.69E-46
MS.gene049622	MS.gene42665	0.851384	9.19E-61	-1.69E-46
MS.gene049622	MS.gene44100	0.840787	7.04E-58	-1.69E-46
MS.gene049622	MS.gene44103	0.828356	9.41E-55	-1.69E-46
MS.gene049622	MS.gene44251	0.820795	5.68E-53	-1.69E-46
MS.gene049622	MS.gene47366	0.812891	3.37E-51	-1.69E-46
MS.gene049622	MS.gene47439	0.811289	7.54E-51	-1.69E-46
MS.gene049622	MS.gene48067	0.825813	3.82E-54	-1.69E-46
MS.gene049622	MS.gene49312	0.806292	8.83E-50	-1.69E-46
MS.gene049622	MS.gene50479	0.845982	2.89E-59	-1.69E-46
MS.gene049622	MS.gene50484	0.833008	6.82E-56	-1.69E-46
MS.gene049622	MS.gene50736	0.84516	4.83E-59	-1.69E-46
MS.gene049622	MS.gene51091	0.811956	5.40E-51	-1.69E-46
MS.gene049622	MS.gene52607	0.835468	1.65E-56	-1.69E-46
MS.gene049622	MS.gene52703	0.864889	8.79E-65	-1.69E-46
MS.gene049622	MS.gene54464	0.805351	1.39E-49	-1.69E-46
MS.gene049622	MS.gene55687	0.818758	1.66E-52	-1.69E-46
MS.gene049622	MS.gene55782	0.822829	1.92E-53	-1.69E-46
MS.gene049622	MS.gene56596	0.815901	7.29E-52	-1.69E-46
MS.gene049622	MS.gene57219	0.805243	1.47E-49	-1.69E-46
MS.gene049622	MS.gene57320	0.807152	5.81E-50	-1.69E-46
MS.gene049622	MS.gene57380	0.810795	9.65E-51	-1.69E-46
MS.gene049622	MS.gene57751	0.826259	2.99E-54	-1.69E-46
MS.gene049622	MS.gene57752	0.819789	9.66E-53	-1.69E-46
MS.gene049622	MS.gene57754	0.803841	2.88E-49	-1.69E-46
MS.gene049622	MS.gene58234	0.828267	9.89E-55	-1.69E-46
MS.gene049622	MS.gene58754	0.808629	2.82E-50	-1.69E-46
MS.gene049622	MS.gene61112	0.809395	1.93E-50	-1.69E-46
MS.gene049622	MS.gene61977	0.823052	1.71E-53	-1.69E-46
MS.gene049622	MS.gene63853	0.818911	1.53E-52	-1.69E-46
MS.gene049622	MS.gene64852	0.822266	2.60E-53	-1.69E-46
MS.gene049622	MS.gene65267	0.814572	1.44E-51	-1.69E-46
MS.gene049622	MS.gene66288	0.800289	1.55E-48	-1.69E-46
MS.gene049622	MS.gene67548	0.807592	4.69E-50	-1.69E-46
MS.gene049622	MS.gene67576	0.80422	2.40E-49	-1.69E-46
MS.gene049622	MS.gene70227	0.803563	3.28E-49	-1.69E-46
MS.gene049622	MS.gene70494	0.8015	8.74E-49	-1.69E-46
MS.gene049622	MS.gene70838	0.809005	2.34E-50	-1.69E-46
MS.gene049622	MS.gene71431	0.834649	2.65E-56	-1.69E-46
MS.gene049622	MS.gene72127	0.846552	2.02E-59	-1.69E-46
MS.gene049622	MS.gene72129	0.84422	8.65E-59	-1.69E-46
MS.gene049622	MS.gene73305	0.806701	7.24E-50	-1.69E-46
MS.gene049622	MS.gene73897	0.820964	5.19E-53	-1.69E-46
MS.gene049622	MS.gene74328	0.823035	1.72E-53	-1.69E-46
MS.gene049622	MS.gene75318	0.802343	5.87E-49	-1.69E-46
MS.gene049622	MS.gene75567	0.805367	1.38E-49	-1.69E-46
MS.gene049622	MS.gene75642	0.824769	6.75E-54	-1.69E-46
MS.gene049622	MS.gene75737	0.814317	1.64E-51	-1.69E-46
MS.gene049622	MS.gene77475	0.818222	2.19E-52	-1.69E-46
MS.gene049622	MS.gene78972	0.8035	3.38E-49	-1.69E-46
MS.gene049622	MS.gene79126	0.80628	8.88E-50	-1.69E-46
MS.gene049622	MS.gene79921	0.803014	4.27E-49	-1.69E-46
MS.gene049622	MS.gene80180	0.844299	8.24E-59	-1.69E-46
MS.gene049622	MS.gene80183	0.856993	2.21E-62	-1.69E-46
MS.gene049622	MS.gene80276	0.80343	3.50E-49	-1.69E-46
MS.gene049622	MS.gene81491	0.820771	5.75E-53	-1.69E-46
MS.gene049622	MS.gene83963	0.822195	2.70E-53	-1.69E-46
MS.gene049622	MS.gene84014	0.839947	1.17E-57	-1.69E-46
MS.gene049622	MS.gene89565	0.818768	1.65E-52	-1.69E-46
MS.gene049622	MS.gene90378	0.809026	2.32E-50	-1.69E-46
MS.gene049622	MS.gene90876	0.840773	7.10E-58	-1.69E-46
MS.gene049622	MS.gene90984	0.811325	7.41E-51	-1.69E-46
MS.gene049622	MS.gene91631	0.841673	4.12E-58	-1.69E-46
MS.gene049622	MS.gene93102	0.851222	1.02E-60	-1.69E-46
MS.gene049622	MS.gene93201	0.841577	4.37E-58	-1.69E-46
MS.gene049622	MS.gene95826	0.81431	1.64E-51	-1.69E-46
MS.gene049622	MS.gene97703	0.803735	3.02E-49	-1.69E-46
MS.gene049622	MS.gene99093	0.817924	2.56E-52	-1.69E-46
MS.gene049622	MS.gene99432	0.830642	2.62E-55	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene55626	MS.gene049622	PPI
MS.gene82109	MS.gene049622	PPI
MS.gene066960	MS.gene049622	PPI
MS.gene79799	MS.gene049622	PPI
MS.gene47284	MS.gene049622	PPI
MS.gene49838	MS.gene049622	PPI
MS.gene042871	MS.gene049622	PPI
MS.gene87898	MS.gene049622	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene049622.t1	MTR_3g063110	98.667	150	2	0	1	150	1	150	1.01e-103	293

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene049622.t1	AT3G46940	87.943	141	17	0	10	150	26	166	5.46e-87	251
MS.gene049622.t1	AT3G46940	87.943	141	17	0	10	150	67	207	6.22e-87	253

Find 47 sgRNAs with CRISPR-Local

Find 63 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCCGGAAGTTTCTGAGGTTT+TGG	0.225618	3.2:+59167932	MS.gene049622:CDS
GTTAGAGGTGAAGGTGGTTT+TGG	0.293840	3.2:+59167969	MS.gene049622:CDS
GATTTGGATTCTACTGTTAG+AGG	0.343621	3.2:+59167954	MS.gene049622:CDS
TTTCTTCACTCGGAGAAAAC+TGG	0.351836	3.2:-59167503	None:intergenic
TCAACAATGTCTAACTTAAA+CGG	0.360985	3.2:+59167469	None:intergenic
ACACGAGCATAGGTTCCTTC+AGG	0.369361	3.2:-59167658	None:intergenic
AACCTTTGAATCGGCGGCGC+TGG	0.374420	3.2:-59167587	None:intergenic
CTGATTACAGAGGACCTGTT+GGG	0.415838	3.2:+59167823	MS.gene049622:CDS
CATTCGATTGACGTTGGTGC+TGG	0.432456	3.2:+59167789	MS.gene049622:CDS
TCCAAAACCTCAGAAACTTC+CGG	0.440429	3.2:-59167933	None:intergenic
CGCGGCTCCCCTCTCTCTGC+CGG	0.443450	3.2:+59167553	MS.gene049622:CDS
ATGAGAGCTTTGCCGCGAGC+AGG	0.461473	3.2:-59167610	None:intergenic
CGCCGAGATCGGGGTTGACA+TGG	0.473074	3.2:+59167763	MS.gene049622:CDS
GGCAGAGAGAGGGGAGCCGC+GGG	0.476034	3.2:-59167551	None:intergenic
TTCCATGTCAACCCCGATCT+CGG	0.481839	3.2:-59167765	None:intergenic
GGAAGGTATGACGGCTTTGT+CGG	0.486471	3.2:-59167530	None:intergenic
TTAAACAGTATAACCCCAAC+AGG	0.497604	3.2:-59167837	None:intergenic
GATTCTACTGTTAGAGGTGA+AGG	0.505946	3.2:+59167960	MS.gene049622:CDS
TGTCGGAGAGTTTCTTCACT+CGG	0.507441	3.2:-59167513	None:intergenic
CTCCAGCGCCGCCGATTCAA+AGG	0.509909	3.2:+59167585	MS.gene049622:CDS
CTCTCCATCGCCGTCCCTGA+AGG	0.513836	3.2:+59167643	MS.gene049622:CDS
GGCGCTGGAGAGATCGTATC+CGG	0.519854	3.2:-59167572	None:intergenic
GAGAGAGGGGAGCCGCGGGA+AGG	0.523039	3.2:-59167547	None:intergenic
CACGAGCATAGGTTCCTTCA+GGG	0.535140	3.2:-59167657	None:intergenic
TATTGAGAAGATTATTACTC+CGG	0.540579	3.2:+59167914	MS.gene049622:CDS
GCGAGCAGGAACCTTTGAAT+CGG	0.540643	3.2:-59167596	None:intergenic
GATCGTATCCGGCAGAGAGA+GGG	0.549237	3.2:-59167561	None:intergenic
CGGCAGAGAGAGGGGAGCCG+CGG	0.551999	3.2:-59167552	None:intergenic
ACGGCGATGGAGAGATCTGT+GGG	0.554559	3.2:-59167634	None:intergenic
GGAGCCGCGGGAAGGTATGA+CGG	0.557254	3.2:-59167539	None:intergenic
ATCGTATCCGGCAGAGAGAG+GGG	0.558090	3.2:-59167560	None:intergenic
GGTTCCTTCAGGGACGGCGA+TGG	0.559917	3.2:-59167647	None:intergenic
TATTACTCCGGAAGTTTCTG+AGG	0.562326	3.2:+59167926	MS.gene049622:CDS
TCTACTGTTAGAGGTGAAGG+TGG	0.578300	3.2:+59167963	MS.gene049622:CDS
GACGGCGATGGAGAGATCTG+TGG	0.578622	3.2:-59167635	None:intergenic
AGCAGGAACCTTTGAATCGG+CGG	0.581168	3.2:-59167593	None:intergenic
AGATCGTATCCGGCAGAGAG+AGG	0.583505	3.2:-59167562	None:intergenic
GTAATTACCAACACGAGCAT+AGG	0.588762	3.2:-59167668	None:intergenic
GAAGGAACCTATGCTCGTGT+TGG	0.606547	3.2:+59167661	MS.gene049622:CDS
GCTGATTACAGAGGACCTGT+TGG	0.614644	3.2:+59167822	MS.gene049622:CDS
TGGAAGCATTCGATTGACGT+TGG	0.614719	3.2:+59167783	MS.gene049622:CDS
AGCATAGGTTCCTTCAGGGA+CGG	0.629807	3.2:-59167653	None:intergenic
GATTCAAAGGTTCCTGCTCG+CGG	0.632457	3.2:+59167598	MS.gene049622:CDS
TGATTACAGAGGACCTGTTG+GGG	0.654205	3.2:+59167824	MS.gene049622:CDS
AAAGCCGTCATACCTTCCCG+CGG	0.718692	3.2:+59167535	MS.gene049622:CDS
GTGATTGATGCTGATTACAG+AGG	0.740502	3.2:+59167813	MS.gene049622:CDS
CGGCGATGGAGAGATCTGTG+GGG	0.756952	3.2:-59167633	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ATTATAGGGTTTTGAAATTT+AGG	+	chr3.2:59167710-59167729	MS.gene049622:intron	20.0%
!!!	TTATAGGGTTTTGAAATTTA+GGG	+	chr3.2:59167711-59167730	MS.gene049622:intron	20.0%
!	AAAACCCTATAATACAAATC+AGG	-	chr3.2:59167703-59167722	None:intergenic	25.0%
!	AAACCCTATAATACAAATCA+GGG	-	chr3.2:59167702-59167721	None:intergenic	25.0%
!	TATTGAGAAGATTATTACTC+CGG	+	chr3.2:59167914-59167933	MS.gene049622:CDS	25.0%
	AACCCTATAATACAAATCAG+GGG	-	chr3.2:59167701-59167720	None:intergenic	30.0%
!!!	GTTGATTTTGAAGTGAAAGT+TGG	+	chr3.2:59167870-59167889	MS.gene049622:CDS	30.0%
	ACCCTATAATACAAATCAGG+GGG	-	chr3.2:59167700-59167719	None:intergenic	35.0%
	GATTTGGATTCTACTGTTAG+AGG	+	chr3.2:59167954-59167973	MS.gene049622:CDS	35.0%
	TTAAACAGTATAACCCCAAC+AGG	-	chr3.2:59167840-59167859	None:intergenic	35.0%
!!!	AGTTTCTGAGGTTTTGGATT+TGG	+	chr3.2:59167938-59167957	MS.gene049622:CDS	35.0%
	CCCTATAATACAAATCAGGG+GGG	-	chr3.2:59167699-59167718	None:intergenic	40.0%
	GATTCTACTGTTAGAGGTGA+AGG	+	chr3.2:59167960-59167979	MS.gene049622:CDS	40.0%
	GTAATTACCAACACGAGCAT+AGG	-	chr3.2:59167671-59167690	None:intergenic	40.0%
	TATTACTCCGGAAGTTTCTG+AGG	+	chr3.2:59167926-59167945	MS.gene049622:CDS	40.0%
	TCCAAAACCTCAGAAACTTC+CGG	-	chr3.2:59167936-59167955	None:intergenic	40.0%
	TTTCTTCACTCGGAGAAAAC+TGG	-	chr3.2:59167506-59167525	None:intergenic	40.0%
!	CCCCCCTGATTTGTATTATA+GGG	+	chr3.2:59167696-59167715	MS.gene049622:intron	40.0%
!	GTGATTGATGCTGATTACAG+AGG	+	chr3.2:59167813-59167832	MS.gene049622:CDS	40.0%
!	TCCCCCCTGATTTGTATTAT+AGG	+	chr3.2:59167695-59167714	MS.gene049622:intron	40.0%
!!!	AAGGTGGTTTTGGATCTACT+GGG	+	chr3.2:59167979-59167998	MS.gene049622:CDS	40.0%
	CTGATTACAGAGGACCTGTT+GGG	+	chr3.2:59167823-59167842	MS.gene049622:CDS	45.0%
	TCTACTGTTAGAGGTGAAGG+TGG	+	chr3.2:59167963-59167982	MS.gene049622:CDS	45.0%
	TGATTACAGAGGACCTGTTG+GGG	+	chr3.2:59167824-59167843	MS.gene049622:CDS	45.0%
	TGTCGGAGAGTTTCTTCACT+CGG	-	chr3.2:59167516-59167535	None:intergenic	45.0%
!	GTTAGAGGTGAAGGTGGTTT+TGG	+	chr3.2:59167969-59167988	MS.gene049622:CDS	45.0%
!!	TGGAAGCATTCGATTGACGT+TGG	+	chr3.2:59167783-59167802	MS.gene049622:CDS	45.0%
!!!	AGGTGGTTTTGGATCTACTG+GGG	+	chr3.2:59167980-59167999	MS.gene049622:CDS	45.0%
!!!	GAAGGTGGTTTTGGATCTAC+TGG	+	chr3.2:59167978-59167997	MS.gene049622:CDS	45.0%
!!!	TCCGGAAGTTTCTGAGGTTT+TGG	+	chr3.2:59167932-59167951	MS.gene049622:CDS	45.0%
	ACACGAGCATAGGTTCCTTC+AGG	-	chr3.2:59167661-59167680	None:intergenic	50.0%
	AGCAGGAACCTTTGAATCGG+CGG	-	chr3.2:59167596-59167615	None:intergenic	50.0%
	AGCATAGGTTCCTTCAGGGA+CGG	-	chr3.2:59167656-59167675	None:intergenic	50.0%
	CACGAGCATAGGTTCCTTCA+GGG	-	chr3.2:59167660-59167679	None:intergenic	50.0%
	CATTCGATTGACGTTGGTGC+TGG	+	chr3.2:59167789-59167808	MS.gene049622:CDS	50.0%
	GAAGGAACCTATGCTCGTGT+TGG	+	chr3.2:59167661-59167680	MS.gene049622:CDS	50.0%
	GATTCAAAGGTTCCTGCTCG+CGG	+	chr3.2:59167598-59167617	MS.gene049622:CDS	50.0%
	GCGAGCAGGAACCTTTGAAT+CGG	-	chr3.2:59167599-59167618	None:intergenic	50.0%
	GCTGATTACAGAGGACCTGT+TGG	+	chr3.2:59167822-59167841	MS.gene049622:CDS	50.0%
	TTCCATGTCAACCCCGATCT+CGG	-	chr3.2:59167768-59167787	None:intergenic	50.0%
!	GGAAGGTATGACGGCTTTGT+CGG	-	chr3.2:59167533-59167552	None:intergenic	50.0%
!!	ATTTTTGCAGCGCCGAGATC+GGG	+	chr3.2:59167753-59167772	MS.gene049622:intron	50.0%
!!	GATTTTTGCAGCGCCGAGAT+CGG	+	chr3.2:59167752-59167771	MS.gene049622:intron	50.0%
	AAAGCCGTCATACCTTCCCG+CGG	+	chr3.2:59167535-59167554	MS.gene049622:CDS	55.0%
	ACGGCGATGGAGAGATCTGT+GGG	-	chr3.2:59167637-59167656	None:intergenic	55.0%
	AGATCGTATCCGGCAGAGAG+AGG	-	chr3.2:59167565-59167584	None:intergenic	55.0%
	ATCGTATCCGGCAGAGAGAG+GGG	-	chr3.2:59167563-59167582	None:intergenic	55.0%
	GATCGTATCCGGCAGAGAGA+GGG	-	chr3.2:59167564-59167583	None:intergenic	55.0%
!!	TTTTTGCAGCGCCGAGATCG+GGG	+	chr3.2:59167754-59167773	MS.gene049622:intron	55.0%
	AACCTTTGAATCGGCGGCGC+TGG	-	chr3.2:59167590-59167609	None:intergenic	60.0%
	ATGAGAGCTTTGCCGCGAGC+AGG	-	chr3.2:59167613-59167632	None:intergenic	60.0%
	CGGCGATGGAGAGATCTGTG+GGG	-	chr3.2:59167636-59167655	None:intergenic	60.0%
	GACGGCGATGGAGAGATCTG+TGG	-	chr3.2:59167638-59167657	None:intergenic	60.0%
!	GGCGCTGGAGAGATCGTATC+CGG	-	chr3.2:59167575-59167594	None:intergenic	60.0%
	CGCCGAGATCGGGGTTGACA+TGG	+	chr3.2:59167763-59167782	MS.gene049622:CDS	65.0%
	CTCTCCATCGCCGTCCCTGA+AGG	+	chr3.2:59167643-59167662	MS.gene049622:CDS	65.0%
	GGTTCCTTCAGGGACGGCGA+TGG	-	chr3.2:59167650-59167669	None:intergenic	65.0%
!	GGAGCCGCGGGAAGGTATGA+CGG	-	chr3.2:59167542-59167561	None:intergenic	65.0%
!!	CTCCAGCGCCGCCGATTCAA+AGG	+	chr3.2:59167585-59167604	MS.gene049622:CDS	65.0%
	CGCGGCTCCCCTCTCTCTGC+CGG	+	chr3.2:59167553-59167572	MS.gene049622:CDS	75.0%
	CGGCAGAGAGAGGGGAGCCG+CGG	-	chr3.2:59167555-59167574	None:intergenic	75.0%
	GAGAGAGGGGAGCCGCGGGA+AGG	-	chr3.2:59167550-59167569	None:intergenic	75.0%
	GGCAGAGAGAGGGGAGCCGC+GGG	-	chr3.2:59167554-59167573	None:intergenic	75.0%

Chromosome	Type	Strat	End	Strand	Name
chr3.2	gene	59167475	59168007	59167475	ID=MS.gene049622
chr3.2	mRNA	59167475	59168007	59167475	ID=MS.gene049622.t1;Parent=MS.gene049622
chr3.2	exon	59167475	59167682	59167475	ID=MS.gene049622.t1.exon1;Parent=MS.gene049622.t1
chr3.2	CDS	59167475	59167682	59167475	ID=cds.MS.gene049622.t1;Parent=MS.gene049622.t1
chr3.2	exon	59167763	59168007	59167763	ID=MS.gene049622.t1.exon2;Parent=MS.gene049622.t1
chr3.2	CDS	59167763	59168007	59167763	ID=cds.MS.gene049622.t1;Parent=MS.gene049622.t1

Gene Sequence

>MS.gene049622

ATGTCTAACTTAAACGGCGTCGTTTCATCCAGTTTTCTCCGAGTGAAGAAACTCTCCGACAAAGCCGTCATACCTTCCCGCGGCTCCCCTCTCTCTGCCGGATACGATCTCTCCAGCGCCGCCGATTCAAAGGTTCCTGCTCGCGGCAAAGCTCTCATCCCCACAGATCTCTCCATCGCCGTCCCTGAAGGAACCTATGCTCGTGTTGGTAATTACTATTTCCCCCCTGATTTGTATTATAGGGTTTTGAAATTTAGGGTTTTTGATTGAATTGAATGATTTTTGCAGCGCCGAGATCGGGGTTGACATGGAAGCATTCGATTGACGTTGGTGCTGGAGTGATTGATGCTGATTACAGAGGACCTGTTGGGGTTATACTGTTTAATCATTCTGATGTTGATTTTGAAGTGAAAGTTGGTGATAGAGTTGCTCAGTTGATTATTGAGAAGATTATTACTCCGGAAGTTTCTGAGGTTTTGGATTTGGATTCTACTGTTAGAGGTGAAGGTGGTTTTGGATCTACTGGGGTTTGA

Protein sequence

>MS.gene049622.t1

MSNLNGVVSSSFLRVKKLSDKAVIPSRGSPLSAGYDLSSAADSKVPARGKALIPTDLSIAVPEGTYARVAPRSGLTWKHSIDVGAGVIDADYRGPVGVILFNHSDVDFEVKVGDRVAQLIIEKIITPEVSEVLDLDSTVRGEGGFGSTGV