Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68213.t1 | XP_003603940.1 | 96.6 | 178 | 6 | 0 | 1 | 178 | 1 | 178 | 1.70E-92 | 348.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68213.t1 | B7FMY9 | 96.6 | 178 | 6 | 0 | 1 | 178 | 1 | 178 | 1.2e-92 | 348.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049411 | MS.gene68213 | 0.801897 | 7.25E-49 | -1.69E-46 |
| MS.gene049680 | MS.gene68213 | 0.817574 | 3.07E-52 | -1.69E-46 |
| MS.gene05029 | MS.gene68213 | 0.809497 | 1.84E-50 | -1.69E-46 |
| MS.gene051003 | MS.gene68213 | 0.80391 | 2.78E-49 | -1.69E-46 |
| MS.gene051234 | MS.gene68213 | 0.808807 | 2.58E-50 | -1.69E-46 |
| MS.gene052072 | MS.gene68213 | 0.818301 | 2.11E-52 | -1.69E-46 |
| MS.gene052296 | MS.gene68213 | 0.812822 | 3.49E-51 | -1.69E-46 |
| MS.gene052793 | MS.gene68213 | 0.821778 | 3.37E-53 | -1.69E-46 |
| MS.gene054403 | MS.gene68213 | 0.803222 | 3.86E-49 | -1.69E-46 |
| MS.gene055555 | MS.gene68213 | 0.802921 | 4.46E-49 | -1.69E-46 |
| MS.gene056693 | MS.gene68213 | 0.822028 | 2.95E-53 | -1.69E-46 |
| MS.gene057102 | MS.gene68213 | 0.810491 | 1.12E-50 | -1.69E-46 |
| MS.gene057999 | MS.gene68213 | 0.815106 | 1.10E-51 | -1.69E-46 |
| MS.gene058074 | MS.gene68213 | 0.80008 | 1.70E-48 | -1.69E-46 |
| MS.gene059146 | MS.gene68213 | 0.807449 | 5.03E-50 | -1.69E-46 |
| MS.gene060763 | MS.gene68213 | 0.820642 | 6.16E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68213.t1 | MTR_3g116830 | 96.629 | 178 | 6 | 0 | 1 | 178 | 1 | 178 | 4.12e-128 | 357 |
| MS.gene68213.t1 | MTR_1g054750 | 26.437 | 174 | 94 | 5 | 32 | 171 | 12 | 185 | 4.30e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68213.t1 | AT2G21620 | 76.404 | 178 | 41 | 1 | 1 | 178 | 1 | 177 | 7.64e-93 | 268 |
| MS.gene68213.t1 | AT2G21620 | 73.913 | 184 | 41 | 2 | 1 | 178 | 1 | 183 | 3.25e-90 | 262 |
Find 43 sgRNAs with CRISPR-Local
Find 105 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACCTTGTTCATGCTGTTTC+TGG | 0.024473 | 3.1:-92165279 | MS.gene68213:intron |
| TAAACCTGCAGCTGTGGTTT+TGG | 0.252116 | 3.1:-92164307 | MS.gene68213:CDS |
| GCACCTGTTGTGATCGTTCC+TGG | 0.338638 | 3.1:-92164086 | MS.gene68213:CDS |
| TCAAAAGCATGTTTACTGTT+TGG | 0.339328 | 3.1:+92165342 | None:intergenic |
| CCAGAGCTTGAGAGGGAAAC+AGG | 0.363491 | 3.1:-92165411 | MS.gene68213:CDS |
| AGCTCTGGCTCAGGCACTAT+TGG | 0.369995 | 3.1:+92165426 | None:intergenic |
| ACTGTTTGGACCATGATCTA+TGG | 0.408420 | 3.1:+92165356 | None:intergenic |
| TTGAAACAAGCTTCTGCCTC+TGG | 0.408871 | 3.1:+92164281 | None:intergenic |
| GTGATGCATCAATGGTCTAA+TGG | 0.411227 | 3.1:-92163971 | None:intergenic |
| CCTGTTTCCCTCTCAAGCTC+TGG | 0.412478 | 3.1:+92165411 | None:intergenic |
| CGACTTAACCCAGGGATTGA+TGG | 0.429955 | 3.1:-92165088 | MS.gene68213:CDS |
| CTAATTTCTCCATCAATCCC+TGG | 0.431733 | 3.1:+92165079 | None:intergenic |
| TCCCTCTCAAGCTCTGGCTC+AGG | 0.455326 | 3.1:+92165417 | None:intergenic |
| TTTCCAGGAACGATCACAAC+AGG | 0.474556 | 3.1:+92164083 | None:intergenic |
| CAGGAGAAAGAAGAAGAGGA+AGG | 0.480520 | 3.1:-92165392 | MS.gene68213:CDS |
| GAGGCAGAAGCTTGTTTCAA+AGG | 0.482260 | 3.1:-92164278 | MS.gene68213:intron |
| GAAACAGGAGAAAGAAGAAG+AGG | 0.483483 | 3.1:-92165396 | MS.gene68213:CDS |
| CGGATAGTGCAAGGTGATGC+AGG | 0.488351 | 3.1:-92164360 | MS.gene68213:CDS |
| GTCCCCAAAACCACAGCTGC+AGG | 0.501479 | 3.1:+92164303 | None:intergenic |
| GTTGTGATCGTTCCTGGAAA+AGG | 0.523884 | 3.1:-92164080 | MS.gene68213:intron |
| TCCTTCTTCAGTGTGCTACA+AGG | 0.530640 | 3.1:-92164146 | MS.gene68213:intron |
| AGGAGAAAGAAGAAGAGGAA+GGG | 0.532412 | 3.1:-92165391 | MS.gene68213:CDS |
| TAAATTAATGGAGACAGTGA+TGG | 0.533156 | 3.1:-92165499 | None:intergenic |
| TAATTTCTCCATCAATCCCT+GGG | 0.538350 | 3.1:+92165080 | None:intergenic |
| TGCCTGAGCCAGAGCTTGAG+AGG | 0.541192 | 3.1:-92165419 | MS.gene68213:CDS |
| AGATGCTGGTGATGCATCAA+TGG | 0.543889 | 3.1:-92163979 | MS.gene68213:CDS |
| ATAGTATTAGCCATAGATCA+TGG | 0.553466 | 3.1:-92165366 | MS.gene68213:CDS |
| AACAGGTGAAAACAGTAGCT+CGG | 0.557174 | 3.1:-92164380 | MS.gene68213:intron |
| GGCACTATTGGTATCAGAGA+AGG | 0.564937 | 3.1:+92165438 | None:intergenic |
| GAGGATTAAACCTGCAGCTG+TGG | 0.569878 | 3.1:-92164313 | MS.gene68213:CDS |
| GATGGAGAAATTAGCGGCTG+AGG | 0.575246 | 3.1:-92165070 | MS.gene68213:CDS |
| GGGATTGATGGAGAAATTAG+CGG | 0.601178 | 3.1:-92165076 | MS.gene68213:CDS |
| AACCAGAAACAGCATGAACA+AGG | 0.607545 | 3.1:+92165277 | None:intergenic |
| GCCTGAGCCAGAGCTTGAGA+GGG | 0.610344 | 3.1:-92165418 | MS.gene68213:CDS |
| TGCAGGAAAAGTAATTTGCA+AGG | 0.617105 | 3.1:-92164343 | MS.gene68213:CDS |
| AACAGCATGAACAAGGTGGA+TGG | 0.627059 | 3.1:+92165284 | None:intergenic |
| ACAGTAGCTCGGATAGTGCA+AGG | 0.631985 | 3.1:-92164369 | MS.gene68213:CDS |
| ATTGTGTACGACTTAACCCA+GGG | 0.659770 | 3.1:-92165096 | MS.gene68213:CDS |
| AATTGTGTACGACTTAACCC+AGG | 0.666749 | 3.1:-92165097 | MS.gene68213:CDS |
| CAGAAACAGCATGAACAAGG+TGG | 0.686182 | 3.1:+92165280 | None:intergenic |
| CAACAGGTGCTGCTTTACAG+TGG | 0.687014 | 3.1:+92164099 | None:intergenic |
| AGTGTGCTACAAGGAAGCGT+CGG | 0.687872 | 3.1:-92164137 | MS.gene68213:CDS |
| TAATTTGCAAGGAAGCAGAG+AGG | 0.695628 | 3.1:-92164332 | MS.gene68213:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAACTTCAATTAATTTATA+TGG | + | chr3.1:92164272-92164291 | None:intergenic | 10.0% |
| !!! | GATTTTTTTTTATTACTTTA+TGG | - | chr3.1:92164302-92164321 | MS.gene68213:CDS | 10.0% |
| !!! | TTATTGTGAATTTATTTTTT+TGG | - | chr3.1:92164970-92164989 | MS.gene68213:intron | 10.0% |
| !! | AAAAAACATATACAGAATAA+TGG | + | chr3.1:92165299-92165318 | None:intergenic | 15.0% |
| !! | TCCAATTTGAAAAATTATAT+AGG | - | chr3.1:92164472-92164491 | MS.gene68213:intron | 15.0% |
| !!! | AAAACTTATTCTTTTTCAAT+GGG | - | chr3.1:92164857-92164876 | MS.gene68213:intron | 15.0% |
| !!! | AATTGAAGTTTTTGTTTTTA+TGG | - | chr3.1:92164280-92164299 | MS.gene68213:CDS | 15.0% |
| !!! | TATTACAAGTTGATTTTATA+CGG | + | chr3.1:92164806-92164825 | None:intergenic | 15.0% |
| !!! | TCCTATATAATTTTTCAAAT+TGG | + | chr3.1:92164476-92164495 | None:intergenic | 15.0% |
| !! | ATCACATGTAAAAAAAACAA+TGG | - | chr3.1:92164606-92164625 | MS.gene68213:intron | 20.0% |
| !! | GCATATCTTGAAATATTTAA+TGG | - | chr3.1:92164655-92164674 | MS.gene68213:intron | 20.0% |
| !! | TAAAATCAACTTGTAATACA+AGG | - | chr3.1:92164808-92164827 | MS.gene68213:intron | 20.0% |
| !! | TATCTTGAAATATTTAATGG+AGG | - | chr3.1:92164658-92164677 | MS.gene68213:intron | 20.0% |
| !! | TCACATGTAAAAAAAACAAT+GGG | - | chr3.1:92164607-92164626 | MS.gene68213:intron | 20.0% |
| !! | TTCATAAGTAAATAGGAAAA+CGG | + | chr3.1:92164451-92164470 | None:intergenic | 20.0% |
| !!! | CAAAACTTATTCTTTTTCAA+TGG | - | chr3.1:92164856-92164875 | MS.gene68213:intron | 20.0% |
| ! | AAAAGTTTAATCAACCATCA+TGG | - | chr3.1:92164714-92164733 | MS.gene68213:intron | 25.0% |
| ! | ACAAATTGTGGTTAATGATT+TGG | + | chr3.1:92164549-92164568 | None:intergenic | 25.0% |
| ! | ATTGGACTTCATAAGTAAAT+AGG | + | chr3.1:92164458-92164477 | None:intergenic | 25.0% |
| ! | CAATAGCATAATTAAGTCAA+GGG | - | chr3.1:92164633-92164652 | MS.gene68213:intron | 25.0% |
| ! | CACATGTAAAAAAAACAATG+GGG | - | chr3.1:92164608-92164627 | MS.gene68213:intron | 25.0% |
| ! | CATACTAATCATAAGTAGAA+TGG | + | chr3.1:92165059-92165078 | None:intergenic | 25.0% |
| ! | GGGATTATTAATACATGTAA+AGG | + | chr3.1:92164894-92164913 | None:intergenic | 25.0% |
| ! | TAATGAGTGATAAACAATAG+AGG | + | chr3.1:92165000-92165019 | None:intergenic | 25.0% |
| ! | TCAATAGCATAATTAAGTCA+AGG | - | chr3.1:92164632-92164651 | MS.gene68213:intron | 25.0% |
| AGTTATCAATAAATGCTGCA+AGG | + | chr3.1:92164915-92164934 | None:intergenic | 30.0% | |
| ATAGTATTAGCCATAGATCA+TGG | - | chr3.1:92164100-92164119 | MS.gene68213:CDS | 30.0% | |
| ATGAGAAGTTAAGAAAGTGA+AGG | + | chr3.1:92164223-92164242 | None:intergenic | 30.0% | |
| GAGGTCAAAGATACTAATTA+CGG | - | chr3.1:92164677-92164696 | MS.gene68213:intron | 30.0% | |
| GATTAGTATGATGTGAAAAC+AGG | - | chr3.1:92165069-92165088 | MS.gene68213:CDS | 30.0% | |
| GTTATCAATAAATGCTGCAA+GGG | + | chr3.1:92164914-92164933 | None:intergenic | 30.0% | |
| TTCAATCCCTTTCTATATCT+CGG | - | chr3.1:92165249-92165268 | MS.gene68213:intron | 30.0% | |
| ! | ACAGTAAACATGCTTTTGAT+TGG | - | chr3.1:92164128-92164147 | MS.gene68213:CDS | 30.0% |
| ! | GCAGCATTTATTGATAACTT+TGG | - | chr3.1:92164916-92164935 | MS.gene68213:intron | 30.0% |
| ! | TCAAAAGCATGTTTACTGTT+TGG | + | chr3.1:92164127-92164146 | None:intergenic | 30.0% |
| !! | ATACTAATTACGGTGGATTA+GGG | - | chr3.1:92164687-92164706 | MS.gene68213:intron | 30.0% |
| !! | CAGTAAACATGCTTTTGATT+GGG | - | chr3.1:92164129-92164148 | MS.gene68213:CDS | 30.0% |
| CTCATTACTACTCTATTTCC+TGG | - | chr3.1:92165013-92165032 | MS.gene68213:intron | 35.0% | |
| GTCAAAGATACTAATTACGG+TGG | - | chr3.1:92164680-92164699 | MS.gene68213:intron | 35.0% | |
| TAATTTCTCCATCAATCCCT+GGG | + | chr3.1:92164389-92164408 | None:intergenic | 35.0% | |
| TACTCTATTTCCTGGCAAAT+TGG | - | chr3.1:92165021-92165040 | MS.gene68213:intron | 35.0% | |
| ! | GATACTAATTACGGTGGATT+AGG | - | chr3.1:92164686-92164705 | MS.gene68213:intron | 35.0% |
| ! | TGCAGGAAAAGTAATTTGCA+AGG | - | chr3.1:92165123-92165142 | MS.gene68213:intron | 35.0% |
| !!! | TTCTTTTTCAATGGGAGACT+TGG | - | chr3.1:92164865-92164884 | MS.gene68213:intron | 35.0% |
| AAATGGACAACTCCGTGAAT+GGG | + | chr3.1:92164574-92164593 | None:intergenic | 40.0% | |
| AACAGGTGAAAACAGTAGCT+CGG | - | chr3.1:92165086-92165105 | MS.gene68213:CDS | 40.0% | |
| AACCAGAAACAGCATGAACA+AGG | + | chr3.1:92164192-92164211 | None:intergenic | 40.0% | |
| AATTGTGTACGACTTAACCC+AGG | - | chr3.1:92164369-92164388 | MS.gene68213:CDS | 40.0% | |
| ACTGTTTGGACCATGATCTA+TGG | + | chr3.1:92164113-92164132 | None:intergenic | 40.0% | |
| AGAATGGCCGAGATATAGAA+AGG | + | chr3.1:92165259-92165278 | None:intergenic | 40.0% | |
| AGGAGAAAGAAGAAGAGGAA+GGG | - | chr3.1:92164075-92164094 | MS.gene68213:intron | 40.0% | |
| ATTCACGGAGTTGTCCATTT+AGG | - | chr3.1:92164574-92164593 | MS.gene68213:intron | 40.0% | |
| ATTGTGTACGACTTAACCCA+GGG | - | chr3.1:92164370-92164389 | MS.gene68213:CDS | 40.0% | |
| CACAATTTGTGTCCCATTCA+CGG | - | chr3.1:92164559-92164578 | MS.gene68213:intron | 40.0% | |
| CTAATTTCTCCATCAATCCC+TGG | + | chr3.1:92164390-92164409 | None:intergenic | 40.0% | |
| CTTCTTTGATTGACAGATGC+TGG | - | chr3.1:92165473-92165492 | MS.gene68213:CDS | 40.0% | |
| GAAACAGGAGAAAGAAGAAG+AGG | - | chr3.1:92164070-92164089 | MS.gene68213:intron | 40.0% | |
| GAACAACTTGTAAGCCATGA+TGG | + | chr3.1:92164731-92164750 | None:intergenic | 40.0% | |
| GAATAGATTGCCAATTTGCC+AGG | + | chr3.1:92165034-92165053 | None:intergenic | 40.0% | |
| GAATGGCCGAGATATAGAAA+GGG | + | chr3.1:92165258-92165277 | None:intergenic | 40.0% | |
| GGGATTGATGGAGAAATTAG+CGG | - | chr3.1:92164390-92164409 | MS.gene68213:intron | 40.0% | |
| GTGATTGACTACCACCTAAA+TGG | + | chr3.1:92164591-92164610 | None:intergenic | 40.0% | |
| TAAATGGACAACTCCGTGAA+TGG | + | chr3.1:92164575-92164594 | None:intergenic | 40.0% | |
| TAACTGCAGTGTGTAGAGAA+TGG | + | chr3.1:92165275-92165294 | None:intergenic | 40.0% | |
| ! | TAATTTGCAAGGAAGCAGAG+AGG | - | chr3.1:92165134-92165153 | MS.gene68213:intron | 40.0% |
| ! | TAGTAATGCACACCTTTTCC+AGG | + | chr3.1:92165401-92165420 | None:intergenic | 40.0% |
| !! | TTGTTCATGCTGTTTCTGGT+TGG | - | chr3.1:92164191-92164210 | MS.gene68213:intron | 40.0% |
| !!! | TGAGGCTTTTGAAGTTGCAA+TGG | - | chr3.1:92164414-92164433 | MS.gene68213:intron | 40.0% |
| AACAGCATGAACAAGGTGGA+TGG | + | chr3.1:92164185-92164204 | None:intergenic | 45.0% | |
| CAGAAACAGCATGAACAAGG+TGG | + | chr3.1:92164189-92164208 | None:intergenic | 45.0% | |
| CAGGAGAAAGAAGAAGAGGA+AGG | - | chr3.1:92164074-92164093 | MS.gene68213:intron | 45.0% | |
| CGTGAATGGGACACAAATTG+TGG | + | chr3.1:92164561-92164580 | None:intergenic | 45.0% | |
| GGCACTATTGGTATCAGAGA+AGG | + | chr3.1:92164031-92164050 | None:intergenic | 45.0% | |
| GTTGTGATCGTTCCTGGAAA+AGG | - | chr3.1:92165386-92165405 | MS.gene68213:CDS | 45.0% | |
| TCCTTCTTCAGTGTGCTACA+AGG | - | chr3.1:92165320-92165339 | MS.gene68213:CDS | 45.0% | |
| TCCTTGTAGCACACTGAAGA+AGG | + | chr3.1:92165324-92165343 | None:intergenic | 45.0% | |
| TTGAAACAAGCTTCTGCCTC+TGG | + | chr3.1:92165188-92165207 | None:intergenic | 45.0% | |
| TTTCCAGGAACGATCACAAC+AGG | + | chr3.1:92165386-92165405 | None:intergenic | 45.0% | |
| ! | AAACCTGCAGCTGTGGTTTT+GGG | - | chr3.1:92165160-92165179 | MS.gene68213:intron | 45.0% |
| ! | AGATGCTGGTGATGCATCAA+TGG | - | chr3.1:92165487-92165506 | MS.gene68213:CDS | 45.0% |
| ! | GAGGCAGAAGCTTGTTTCAA+AGG | - | chr3.1:92165188-92165207 | MS.gene68213:intron | 45.0% |
| ! | TAAACCTGCAGCTGTGGTTT+TGG | - | chr3.1:92165159-92165178 | MS.gene68213:intron | 45.0% |
| !! | CACCTTGTTCATGCTGTTTC+TGG | - | chr3.1:92164187-92164206 | MS.gene68213:intron | 45.0% |
| !! | TCATGCTGTTTCTGGTTGGT+TGG | - | chr3.1:92164195-92164214 | MS.gene68213:intron | 45.0% |
| !! | AAAAAAAATAAAAATAAACA+TGG | - | chr3.1:92164521-92164540 | MS.gene68213:intron | 5.0% |
| ACAGTAGCTCGGATAGTGCA+AGG | - | chr3.1:92165097-92165116 | MS.gene68213:CDS | 50.0% | |
| CACGGAGTTGTCCATTTAGG+TGG | - | chr3.1:92164577-92164596 | MS.gene68213:intron | 50.0% | |
| CGACTTAACCCAGGGATTGA+TGG | - | chr3.1:92164378-92164397 | MS.gene68213:CDS | 50.0% | |
| GAGGATTAAACCTGCAGCTG+TGG | - | chr3.1:92165153-92165172 | MS.gene68213:intron | 50.0% | |
| GATGGAGAAATTAGCGGCTG+AGG | - | chr3.1:92164396-92164415 | MS.gene68213:intron | 50.0% | |
| GTGAGCGTGTGTGTGTGTAT+GGG | - | chr3.1:92165210-92165229 | MS.gene68213:intron | 50.0% | |
| ! | AGTGTGCTACAAGGAAGCGT+CGG | - | chr3.1:92165329-92165348 | MS.gene68213:CDS | 50.0% |
| !! | AACCTGCAGCTGTGGTTTTG+GGG | - | chr3.1:92165161-92165180 | MS.gene68213:intron | 50.0% |
| !! | CAACAGGTGCTGCTTTACAG+TGG | + | chr3.1:92165370-92165389 | None:intergenic | 50.0% |
| CCAGAGCTTGAGAGGGAAAC+AGG | - | chr3.1:92164055-92164074 | MS.gene68213:intron | 55.0% | |
| CCTGTTTCCCTCTCAAGCTC+TGG | + | chr3.1:92164058-92164077 | None:intergenic | 55.0% | |
| CGGATAGTGCAAGGTGATGC+AGG | - | chr3.1:92165106-92165125 | MS.gene68213:CDS | 55.0% | |
| GCACCTGTTGTGATCGTTCC+TGG | - | chr3.1:92165380-92165399 | MS.gene68213:CDS | 55.0% | |
| GGTGAGCGTGTGTGTGTGTA+TGG | - | chr3.1:92165209-92165228 | MS.gene68213:intron | 55.0% | |
| ! | AGCTCTGGCTCAGGCACTAT+TGG | + | chr3.1:92164043-92164062 | None:intergenic | 55.0% |
| GCCTGAGCCAGAGCTTGAGA+GGG | - | chr3.1:92164048-92164067 | MS.gene68213:intron | 60.0% | |
| GTCCCCAAAACCACAGCTGC+AGG | + | chr3.1:92165166-92165185 | None:intergenic | 60.0% | |
| TGCCTGAGCCAGAGCTTGAG+AGG | - | chr3.1:92164047-92164066 | MS.gene68213:intron | 60.0% | |
| ! | TCCCTCTCAAGCTCTGGCTC+AGG | + | chr3.1:92164052-92164071 | None:intergenic | 60.0% |
| !!! | GCTGTGGTTTTGGGGACCAG+AGG | - | chr3.1:92165169-92165188 | MS.gene68213:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 92163974 | 92165514 | 92163974 | ID=MS.gene68213 |
| chr3.1 | mRNA | 92163974 | 92165514 | 92163974 | ID=MS.gene68213.t1;Parent=MS.gene68213 |
| chr3.1 | exon | 92165280 | 92165514 | 92165280 | ID=MS.gene68213.t1.exon1;Parent=MS.gene68213.t1 |
| chr3.1 | CDS | 92165280 | 92165514 | 92165280 | ID=cds.MS.gene68213.t1;Parent=MS.gene68213.t1 |
| chr3.1 | exon | 92165053 | 92165132 | 92165053 | ID=MS.gene68213.t1.exon2;Parent=MS.gene68213.t1 |
| chr3.1 | CDS | 92165053 | 92165132 | 92165053 | ID=cds.MS.gene68213.t1;Parent=MS.gene68213.t1 |
| chr3.1 | exon | 92164279 | 92164397 | 92164279 | ID=MS.gene68213.t1.exon3;Parent=MS.gene68213.t1 |
| chr3.1 | CDS | 92164279 | 92164397 | 92164279 | ID=cds.MS.gene68213.t1;Parent=MS.gene68213.t1 |
| chr3.1 | exon | 92164081 | 92164157 | 92164081 | ID=MS.gene68213.t1.exon4;Parent=MS.gene68213.t1 |
| chr3.1 | CDS | 92164081 | 92164157 | 92164081 | ID=cds.MS.gene68213.t1;Parent=MS.gene68213.t1 |
| chr3.1 | exon | 92163974 | 92163999 | 92163974 | ID=MS.gene68213.t1.exon5;Parent=MS.gene68213.t1 |
| chr3.1 | CDS | 92163974 | 92163999 | 92163974 | ID=cds.MS.gene68213.t1;Parent=MS.gene68213.t1 |
| Gene Sequence |
| Protein sequence |
