Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052793.t1 | XP_003604558.1 | 99.4 | 170 | 1 | 0 | 1 | 170 | 1 | 170 | 5.30E-91 | 343.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052793.t1 | Q9M015 | 75.9 | 170 | 41 | 0 | 1 | 170 | 1 | 170 | 1.9e-73 | 276.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052793.t1 | G7JLS2 | 99.4 | 170 | 1 | 0 | 1 | 170 | 1 | 170 | 3.8e-91 | 343.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04918 | MS.gene052793 | 0.809776 | 1.60E-50 | -1.69E-46 |
| MS.gene04919 | MS.gene052793 | 0.808287 | 3.34E-50 | -1.69E-46 |
| MS.gene04920 | MS.gene052793 | 0.820841 | 5.54E-53 | -1.69E-46 |
| MS.gene049499 | MS.gene052793 | 0.805168 | 1.52E-49 | -1.69E-46 |
| MS.gene049680 | MS.gene052793 | 0.812423 | 4.27E-51 | -1.69E-46 |
| MS.gene050945 | MS.gene052793 | 0.829019 | 6.51E-55 | -1.69E-46 |
| MS.gene051019 | MS.gene052793 | 0.802841 | 4.63E-49 | -1.69E-46 |
| MS.gene051234 | MS.gene052793 | 0.810301 | 1.23E-50 | -1.69E-46 |
| MS.gene051699 | MS.gene052793 | 0.852211 | 5.36E-61 | -1.69E-46 |
| MS.gene051731 | MS.gene052793 | 0.813444 | 2.55E-51 | -1.69E-46 |
| MS.gene052072 | MS.gene052793 | 0.801567 | 8.47E-49 | -1.69E-46 |
| MS.gene052296 | MS.gene052793 | 0.811314 | 7.45E-51 | -1.69E-46 |
| MS.gene052533 | MS.gene052793 | 0.833802 | 4.33E-56 | -1.69E-46 |
| MS.gene052793 | MS.gene053228 | 0.823187 | 1.59E-53 | -1.69E-46 |
| MS.gene052793 | MS.gene053879 | 0.804179 | 2.45E-49 | -1.69E-46 |
| MS.gene052793 | MS.gene054222 | 0.82409 | 9.75E-54 | -1.69E-46 |
| MS.gene052793 | MS.gene055150 | 0.821618 | 3.67E-53 | -1.69E-46 |
| MS.gene052793 | MS.gene055339 | 0.800999 | 1.11E-48 | -1.69E-46 |
| MS.gene052793 | MS.gene056082 | 0.805415 | 1.35E-49 | -1.69E-46 |
| MS.gene052793 | MS.gene056677 | 0.824475 | 7.91E-54 | -1.69E-46 |
| MS.gene052793 | MS.gene057102 | 0.836902 | 7.13E-57 | -1.69E-46 |
| MS.gene052793 | MS.gene058159 | 0.809211 | 2.12E-50 | -1.69E-46 |
| MS.gene052793 | MS.gene058592 | 0.824952 | 6.11E-54 | -1.69E-46 |
| MS.gene052793 | MS.gene059227 | 0.800335 | 1.51E-48 | -1.69E-46 |
| MS.gene052793 | MS.gene05952 | 0.807037 | 6.15E-50 | -1.69E-46 |
| MS.gene052793 | MS.gene05985 | -0.832841 | 7.51E-56 | -1.69E-46 |
| MS.gene052793 | MS.gene060937 | 0.808866 | 2.51E-50 | -1.69E-46 |
| MS.gene052793 | MS.gene061100 | 0.843226 | 1.60E-58 | -1.69E-46 |
| MS.gene052793 | MS.gene061243 | 0.805358 | 1.39E-49 | -1.69E-46 |
| MS.gene052793 | MS.gene061707 | 0.835718 | 1.43E-56 | -1.69E-46 |
| MS.gene052793 | MS.gene061782 | 0.847446 | 1.15E-59 | -1.69E-46 |
| MS.gene052793 | MS.gene062512 | 0.804632 | 1.97E-49 | -1.69E-46 |
| MS.gene052793 | MS.gene063026 | 0.802392 | 5.73E-49 | -1.69E-46 |
| MS.gene052793 | MS.gene063667 | 0.815646 | 8.31E-52 | -1.69E-46 |
| MS.gene052793 | MS.gene064124 | 0.804066 | 2.58E-49 | -1.69E-46 |
| MS.gene052793 | MS.gene065055 | 0.808632 | 2.82E-50 | -1.69E-46 |
| MS.gene052793 | MS.gene065069 | 0.814904 | 1.21E-51 | -1.69E-46 |
| MS.gene052793 | MS.gene066012 | 0.833378 | 5.52E-56 | -1.69E-46 |
| MS.gene052793 | MS.gene067571 | 0.805024 | 1.63E-49 | -1.69E-46 |
| MS.gene052793 | MS.gene069825 | 0.800147 | 1.65E-48 | -1.69E-46 |
| MS.gene052793 | MS.gene069828 | 0.857713 | 1.35E-62 | -1.69E-46 |
| MS.gene052793 | MS.gene070025 | 0.841159 | 5.63E-58 | -1.69E-46 |
| MS.gene052793 | MS.gene070029 | 0.833098 | 6.48E-56 | -1.69E-46 |
| MS.gene052793 | MS.gene070437 | 0.804525 | 2.07E-49 | -1.69E-46 |
| MS.gene052793 | MS.gene070918 | 0.809162 | 2.17E-50 | -1.69E-46 |
| MS.gene052793 | MS.gene072545 | 0.830276 | 3.22E-55 | -1.69E-46 |
| MS.gene052793 | MS.gene073207 | 0.860564 | 1.89E-63 | -1.69E-46 |
| MS.gene052793 | MS.gene073244 | 0.803489 | 3.40E-49 | -1.69E-46 |
| MS.gene052793 | MS.gene073500 | 0.81328 | 2.77E-51 | -1.69E-46 |
| MS.gene052793 | MS.gene073670 | 0.812291 | 4.56E-51 | -1.69E-46 |
| MS.gene052793 | MS.gene074317 | 0.845021 | 5.26E-59 | -1.69E-46 |
| MS.gene052793 | MS.gene07450 | 0.811685 | 6.19E-51 | -1.69E-46 |
| MS.gene052793 | MS.gene07878 | 0.823712 | 1.19E-53 | -1.69E-46 |
| MS.gene052793 | MS.gene08108 | 0.808919 | 2.44E-50 | -1.69E-46 |
| MS.gene052793 | MS.gene08461 | 0.820773 | 5.74E-53 | -1.69E-46 |
| MS.gene052793 | MS.gene08649 | 0.817106 | 3.92E-52 | -1.69E-46 |
| MS.gene052793 | MS.gene09061 | 0.810967 | 8.86E-51 | -1.69E-46 |
| MS.gene052793 | MS.gene20064 | 0.836073 | 1.16E-56 | -1.69E-46 |
| MS.gene052793 | MS.gene20997 | 0.812224 | 4.72E-51 | -1.69E-46 |
| MS.gene052793 | MS.gene21114 | 0.8053 | 1.43E-49 | -1.69E-46 |
| MS.gene052793 | MS.gene22433 | 0.83709 | 6.38E-57 | -1.69E-46 |
| MS.gene052793 | MS.gene22992 | -0.805963 | 1.04E-49 | -1.69E-46 |
| MS.gene052793 | MS.gene23695 | 0.848301 | 6.69E-60 | -1.69E-46 |
| MS.gene052793 | MS.gene24050 | 0.853642 | 2.09E-61 | -1.69E-46 |
| MS.gene052793 | MS.gene24052 | 0.851546 | 8.27E-61 | -1.69E-46 |
| MS.gene052793 | MS.gene25061 | 0.813716 | 2.22E-51 | -1.69E-46 |
| MS.gene052793 | MS.gene25981 | -0.840268 | 9.63E-58 | -1.69E-46 |
| MS.gene052793 | MS.gene25991 | 0.834213 | 3.41E-56 | -1.69E-46 |
| MS.gene052793 | MS.gene26832 | 0.803881 | 2.82E-49 | -1.69E-46 |
| MS.gene052793 | MS.gene27516 | 0.80672 | 7.17E-50 | -1.69E-46 |
| MS.gene052793 | MS.gene28354 | 0.806429 | 8.26E-50 | -1.69E-46 |
| MS.gene052793 | MS.gene28611 | 0.813749 | 2.19E-51 | -1.69E-46 |
| MS.gene052793 | MS.gene28918 | 0.825876 | 3.69E-54 | -1.69E-46 |
| MS.gene052793 | MS.gene29920 | 0.805495 | 1.30E-49 | -1.69E-46 |
| MS.gene052793 | MS.gene29921 | 0.800458 | 1.43E-48 | -1.69E-46 |
| MS.gene052793 | MS.gene30352 | 0.822104 | 2.83E-53 | -1.69E-46 |
| MS.gene052793 | MS.gene31111 | 0.80534 | 1.40E-49 | -1.69E-46 |
| MS.gene052793 | MS.gene31856 | 0.820236 | 7.63E-53 | -1.69E-46 |
| MS.gene052793 | MS.gene32182 | 0.813644 | 2.31E-51 | -1.69E-46 |
| MS.gene052793 | MS.gene32688 | 0.850562 | 1.57E-60 | -1.69E-46 |
| MS.gene052793 | MS.gene32708 | 0.826399 | 2.77E-54 | -1.69E-46 |
| MS.gene052793 | MS.gene32866 | 0.813788 | 2.14E-51 | -1.69E-46 |
| MS.gene052793 | MS.gene33706 | 0.826377 | 2.80E-54 | -1.69E-46 |
| MS.gene052793 | MS.gene34164 | 0.817325 | 3.50E-52 | -1.69E-46 |
| MS.gene052793 | MS.gene34266 | 0.805939 | 1.05E-49 | -1.69E-46 |
| MS.gene052793 | MS.gene34508 | 0.833683 | 4.63E-56 | -1.69E-46 |
| MS.gene052793 | MS.gene36100 | 0.813451 | 2.54E-51 | -1.69E-46 |
| MS.gene052793 | MS.gene36497 | 0.848551 | 5.70E-60 | -1.69E-46 |
| MS.gene052793 | MS.gene36625 | 0.800436 | 1.44E-48 | -1.69E-46 |
| MS.gene052793 | MS.gene37106 | 0.82205 | 2.91E-53 | -1.69E-46 |
| MS.gene052793 | MS.gene37345 | -0.823255 | 1.53E-53 | -1.69E-46 |
| MS.gene052793 | MS.gene37412 | 0.805804 | 1.12E-49 | -1.69E-46 |
| MS.gene052793 | MS.gene37471 | 0.80041 | 1.46E-48 | -1.69E-46 |
| MS.gene052793 | MS.gene39037 | 0.825403 | 4.78E-54 | -1.69E-46 |
| MS.gene052793 | MS.gene39190 | 0.820428 | 6.90E-53 | -1.69E-46 |
| MS.gene052793 | MS.gene39406 | 0.813845 | 2.08E-51 | -1.69E-46 |
| MS.gene052793 | MS.gene41627 | 0.800353 | 1.50E-48 | -1.69E-46 |
| MS.gene052793 | MS.gene42115 | -0.800539 | 1.37E-48 | -1.69E-46 |
| MS.gene052793 | MS.gene42653 | 0.86009 | 2.63E-63 | -1.69E-46 |
| MS.gene052793 | MS.gene42671 | 0.833715 | 4.55E-56 | -1.69E-46 |
| MS.gene052793 | MS.gene45537 | 0.809275 | 2.05E-50 | -1.69E-46 |
| MS.gene052793 | MS.gene45708 | 0.815648 | 8.30E-52 | -1.69E-46 |
| MS.gene052793 | MS.gene46390 | 0.842158 | 3.07E-58 | -1.69E-46 |
| MS.gene052793 | MS.gene47276 | 0.860282 | 2.30E-63 | -1.69E-46 |
| MS.gene052793 | MS.gene47913 | 0.800242 | 1.58E-48 | -1.69E-46 |
| MS.gene052793 | MS.gene48037 | 0.801683 | 8.02E-49 | -1.69E-46 |
| MS.gene052793 | MS.gene48348 | 0.802959 | 4.38E-49 | -1.69E-46 |
| MS.gene052793 | MS.gene49818 | 0.819576 | 1.08E-52 | -1.69E-46 |
| MS.gene052793 | MS.gene50004 | 0.800337 | 1.51E-48 | -1.69E-46 |
| MS.gene052793 | MS.gene50013 | 0.806838 | 6.77E-50 | -1.69E-46 |
| MS.gene052793 | MS.gene50394 | 0.841589 | 4.34E-58 | -1.69E-46 |
| MS.gene052793 | MS.gene51145 | 0.852718 | 3.84E-61 | -1.69E-46 |
| MS.gene052793 | MS.gene52122 | 0.810092 | 1.37E-50 | -1.69E-46 |
| MS.gene052793 | MS.gene52404 | 0.841256 | 5.31E-58 | -1.69E-46 |
| MS.gene052793 | MS.gene52849 | 0.813883 | 2.04E-51 | -1.69E-46 |
| MS.gene052793 | MS.gene52994 | 0.828541 | 8.49E-55 | -1.69E-46 |
| MS.gene052793 | MS.gene53391 | 0.805141 | 1.54E-49 | -1.69E-46 |
| MS.gene052793 | MS.gene54573 | 0.832772 | 7.81E-56 | -1.69E-46 |
| MS.gene052793 | MS.gene54747 | 0.826404 | 2.76E-54 | -1.69E-46 |
| MS.gene052793 | MS.gene55094 | 0.812818 | 3.50E-51 | -1.69E-46 |
| MS.gene052793 | MS.gene55653 | 0.800074 | 1.71E-48 | -1.69E-46 |
| MS.gene052793 | MS.gene55699 | 0.80631 | 8.75E-50 | -1.69E-46 |
| MS.gene052793 | MS.gene55707 | 0.80579 | 1.13E-49 | -1.69E-46 |
| MS.gene052793 | MS.gene55818 | 0.807703 | 4.44E-50 | -1.69E-46 |
| MS.gene052793 | MS.gene57128 | 0.811718 | 6.08E-51 | -1.69E-46 |
| MS.gene052793 | MS.gene57783 | 0.800347 | 1.50E-48 | -1.69E-46 |
| MS.gene052793 | MS.gene58248 | 0.825347 | 4.93E-54 | -1.69E-46 |
| MS.gene052793 | MS.gene58719 | 0.830707 | 2.52E-55 | -1.69E-46 |
| MS.gene052793 | MS.gene59241 | 0.809443 | 1.89E-50 | -1.69E-46 |
| MS.gene052793 | MS.gene59242 | 0.821953 | 3.07E-53 | -1.69E-46 |
| MS.gene052793 | MS.gene59505 | 0.807379 | 5.20E-50 | -1.69E-46 |
| MS.gene052793 | MS.gene59540 | 0.803891 | 2.81E-49 | -1.69E-46 |
| MS.gene052793 | MS.gene59616 | 0.826931 | 2.07E-54 | -1.69E-46 |
| MS.gene052793 | MS.gene59697 | 0.826178 | 3.13E-54 | -1.69E-46 |
| MS.gene052793 | MS.gene60384 | 0.817737 | 2.82E-52 | -1.69E-46 |
| MS.gene052793 | MS.gene60710 | 0.822994 | 1.76E-53 | -1.69E-46 |
| MS.gene052793 | MS.gene61153 | 0.826214 | 3.07E-54 | -1.69E-46 |
| MS.gene052793 | MS.gene61254 | 0.835226 | 1.90E-56 | -1.69E-46 |
| MS.gene052793 | MS.gene61588 | 0.820451 | 6.81E-53 | -1.69E-46 |
| MS.gene052793 | MS.gene62676 | 0.855466 | 6.19E-62 | -1.69E-46 |
| MS.gene052793 | MS.gene62677 | 0.85274 | 3.78E-61 | -1.69E-46 |
| MS.gene052793 | MS.gene62926 | 0.816904 | 4.35E-52 | -1.69E-46 |
| MS.gene052793 | MS.gene63430 | 0.827138 | 1.85E-54 | -1.69E-46 |
| MS.gene052793 | MS.gene64395 | 0.800229 | 1.59E-48 | -1.69E-46 |
| MS.gene052793 | MS.gene64806 | 0.80925 | 2.08E-50 | -1.69E-46 |
| MS.gene052793 | MS.gene66579 | 0.800164 | 1.64E-48 | -1.69E-46 |
| MS.gene052793 | MS.gene66979 | 0.818883 | 1.55E-52 | -1.69E-46 |
| MS.gene052793 | MS.gene67216 | 0.803572 | 3.27E-49 | -1.69E-46 |
| MS.gene052793 | MS.gene67485 | 0.821755 | 3.41E-53 | -1.69E-46 |
| MS.gene052793 | MS.gene68198 | 0.815232 | 1.03E-51 | -1.69E-46 |
| MS.gene052793 | MS.gene68213 | 0.821778 | 3.37E-53 | -1.69E-46 |
| MS.gene052793 | MS.gene68215 | 0.804008 | 2.65E-49 | -1.69E-46 |
| MS.gene052793 | MS.gene68216 | 0.804339 | 2.26E-49 | -1.69E-46 |
| MS.gene052793 | MS.gene68663 | 0.807328 | 5.33E-50 | -1.69E-46 |
| MS.gene052793 | MS.gene68713 | 0.804386 | 2.22E-49 | -1.69E-46 |
| MS.gene052793 | MS.gene68806 | 0.807708 | 4.43E-50 | -1.69E-46 |
| MS.gene052793 | MS.gene69799 | 0.803706 | 3.07E-49 | -1.69E-46 |
| MS.gene052793 | MS.gene69820 | 0.864033 | 1.63E-64 | -1.69E-46 |
| MS.gene052793 | MS.gene69823 | 0.816942 | 4.26E-52 | -1.69E-46 |
| MS.gene052793 | MS.gene70154 | 0.806112 | 9.63E-50 | -1.69E-46 |
| MS.gene052793 | MS.gene70656 | 0.814756 | 1.31E-51 | -1.69E-46 |
| MS.gene052793 | MS.gene70661 | 0.813128 | 2.99E-51 | -1.69E-46 |
| MS.gene052793 | MS.gene71891 | -0.809204 | 2.12E-50 | -1.69E-46 |
| MS.gene052793 | MS.gene72379 | 0.832645 | 8.40E-56 | -1.69E-46 |
| MS.gene052793 | MS.gene72950 | -0.808911 | 2.45E-50 | -1.69E-46 |
| MS.gene052793 | MS.gene73644 | 0.832009 | 1.21E-55 | -1.69E-46 |
| MS.gene052793 | MS.gene73823 | 0.833263 | 5.90E-56 | -1.69E-46 |
| MS.gene052793 | MS.gene73885 | 0.807811 | 4.21E-50 | -1.69E-46 |
| MS.gene052793 | MS.gene74537 | 0.829191 | 5.91E-55 | -1.69E-46 |
| MS.gene052793 | MS.gene74606 | 0.840039 | 1.11E-57 | -1.69E-46 |
| MS.gene052793 | MS.gene74972 | 0.816144 | 6.43E-52 | -1.69E-46 |
| MS.gene052793 | MS.gene74982 | 0.825538 | 4.44E-54 | -1.69E-46 |
| MS.gene052793 | MS.gene74985 | 0.804929 | 1.71E-49 | -1.69E-46 |
| MS.gene052793 | MS.gene75344 | 0.850481 | 1.65E-60 | -1.69E-46 |
| MS.gene052793 | MS.gene76227 | 0.809412 | 1.92E-50 | -1.69E-46 |
| MS.gene052793 | MS.gene76273 | 0.819853 | 9.34E-53 | -1.69E-46 |
| MS.gene052793 | MS.gene76314 | 0.836492 | 9.07E-57 | -1.69E-46 |
| MS.gene052793 | MS.gene77361 | 0.812026 | 5.21E-51 | -1.69E-46 |
| MS.gene052793 | MS.gene80177 | 0.840594 | 7.92E-58 | -1.69E-46 |
| MS.gene052793 | MS.gene80201 | 0.852662 | 3.99E-61 | -1.69E-46 |
| MS.gene052793 | MS.gene80729 | 0.805125 | 1.55E-49 | -1.69E-46 |
| MS.gene052793 | MS.gene81751 | 0.809175 | 2.15E-50 | -1.69E-46 |
| MS.gene052793 | MS.gene82421 | 0.80032 | 1.52E-48 | -1.69E-46 |
| MS.gene052793 | MS.gene83022 | 0.809858 | 1.54E-50 | -1.69E-46 |
| MS.gene052793 | MS.gene83864 | 0.844319 | 8.14E-59 | -1.69E-46 |
| MS.gene052793 | MS.gene84179 | 0.812212 | 4.75E-51 | -1.69E-46 |
| MS.gene052793 | MS.gene84703 | 0.807193 | 5.70E-50 | -1.69E-46 |
| MS.gene052793 | MS.gene84834 | 0.808988 | 2.36E-50 | -1.69E-46 |
| MS.gene052793 | MS.gene86038 | 0.868543 | 6.04E-66 | -1.69E-46 |
| MS.gene052793 | MS.gene87292 | 0.862117 | 6.36E-64 | -1.69E-46 |
| MS.gene052793 | MS.gene87673 | 0.80773 | 4.38E-50 | -1.69E-46 |
| MS.gene052793 | MS.gene87969 | 0.810206 | 1.29E-50 | -1.69E-46 |
| MS.gene052793 | MS.gene88147 | 0.828512 | 8.63E-55 | -1.69E-46 |
| MS.gene052793 | MS.gene89256 | 0.804587 | 2.01E-49 | -1.69E-46 |
| MS.gene052793 | MS.gene91203 | 0.863162 | 3.03E-64 | -1.69E-46 |
| MS.gene052793 | MS.gene92256 | 0.810896 | 9.18E-51 | -1.69E-46 |
| MS.gene052793 | MS.gene93374 | 0.801305 | 9.59E-49 | -1.69E-46 |
| MS.gene052793 | MS.gene93728 | 0.800629 | 1.32E-48 | -1.69E-46 |
| MS.gene052793 | MS.gene94674 | 0.826514 | 2.60E-54 | -1.69E-46 |
| MS.gene052793 | MS.gene95614 | 0.804564 | 2.03E-49 | -1.69E-46 |
| MS.gene052793 | MS.gene95728 | 0.824645 | 7.21E-54 | -1.69E-46 |
| MS.gene052793 | MS.gene98636 | 0.818327 | 2.08E-52 | -1.69E-46 |
| MS.gene052793 | MS.gene99894 | 0.806444 | 8.20E-50 | -1.69E-46 |
| MS.gene052793 | MS.gene99915 | 0.817437 | 3.30E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene052793 | MS.gene069002 | PPI |
| MS.gene071033 | MS.gene052793 | PPI |
| MS.gene93374 | MS.gene052793 | PPI |
| MS.gene95675 | MS.gene052793 | PPI |
| MS.gene85907 | MS.gene052793 | PPI |
| MS.gene052793 | MS.gene55328 | PPI |
| MS.gene53126 | MS.gene052793 | PPI |
| MS.gene78559 | MS.gene052793 | PPI |
| MS.gene99505 | MS.gene052793 | PPI |
| MS.gene052793 | MS.gene33453 | PPI |
| MS.gene33706 | MS.gene052793 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052793.t1 | MTR_4g014490 | 99.412 | 170 | 1 | 0 | 1 | 170 | 1 | 170 | 3.47e-123 | 344 |
| MS.gene052793.t1 | MTR_7g070000 | 85.294 | 170 | 25 | 0 | 1 | 170 | 1 | 170 | 5.24e-105 | 298 |
| MS.gene052793.t1 | MTR_5g043190 | 51.807 | 166 | 77 | 1 | 8 | 170 | 15 | 180 | 7.24e-60 | 184 |
| MS.gene052793.t1 | MTR_4g109140 | 45.977 | 174 | 90 | 1 | 1 | 170 | 1 | 174 | 1.48e-54 | 170 |
| MS.gene052793.t1 | MTR_7g108775 | 35.354 | 99 | 62 | 2 | 56 | 153 | 33 | 130 | 3.98e-15 | 69.3 |
| MS.gene052793.t1 | MTR_7g108775 | 36.842 | 95 | 58 | 2 | 56 | 149 | 33 | 126 | 5.35e-15 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052793.t1 | AT3G08890 | 78.235 | 170 | 37 | 0 | 1 | 170 | 1 | 170 | 2.44e-100 | 286 |
| MS.gene052793.t1 | AT3G08890 | 78.235 | 170 | 37 | 0 | 1 | 170 | 1 | 170 | 2.44e-100 | 286 |
| MS.gene052793.t1 | AT5G37070 | 79.412 | 170 | 35 | 0 | 1 | 170 | 1 | 170 | 2.61e-99 | 283 |
| MS.gene052793.t1 | AT5G01610 | 75.882 | 170 | 41 | 0 | 1 | 170 | 1 | 170 | 1.25e-96 | 277 |
| MS.gene052793.t1 | AT5G01610 | 75.882 | 170 | 41 | 0 | 1 | 170 | 1 | 170 | 1.25e-96 | 277 |
| MS.gene052793.t1 | AT2G03350 | 50.610 | 164 | 78 | 1 | 7 | 167 | 12 | 175 | 9.52e-54 | 169 |
| MS.gene052793.t1 | AT1G02816 | 25.217 | 115 | 83 | 2 | 57 | 168 | 35 | 149 | 1.48e-12 | 62.8 |
| MS.gene052793.t1 | AT4G02370 | 27.368 | 95 | 68 | 1 | 56 | 149 | 34 | 128 | 1.14e-11 | 60.1 |
| MS.gene052793.t1 | AT4G02360 | 29.358 | 109 | 74 | 3 | 51 | 157 | 25 | 132 | 1.84e-11 | 59.3 |
Find 41 sgRNAs with CRISPR-Local
Find 187 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTTTCTTCACCACTGTTAC+AGG | 0.242434 | 4.4:-86269552 | MS.gene052793:CDS |
| TGAAGACAAAAGTTATTATC+TGG | 0.261455 | 4.4:-86269491 | MS.gene052793:CDS |
| CACCACTGTTACAGGTTATC+TGG | 0.277467 | 4.4:-86269544 | MS.gene052793:CDS |
| CTTCGATCCCTCGGAGAAAA+TGG | 0.294455 | 4.4:+86269455 | None:intergenic |
| GCCATTACCAGAGTTGTTAA+AGG | 0.295014 | 4.4:-86269703 | MS.gene052793:CDS |
| TGGTTGGTCAACAAAGTAAA+AGG | 0.300821 | 4.4:-86271043 | MS.gene052793:intron |
| TACTTTGTTGACCAACCATT+TGG | 0.339849 | 4.4:+86271048 | None:intergenic |
| GACGGAATTAAGCTCCTTGC+TGG | 0.370970 | 4.4:+86272198 | None:intergenic |
| TCAACAAGGTTGGATCCTAT+TGG | 0.402846 | 4.4:-86272234 | MS.gene052793:CDS |
| TCCTTTAACAACTCTGGTAA+TGG | 0.418016 | 4.4:+86269702 | None:intergenic |
| GGCTTTCTGATTGAACCAAT+AGG | 0.431334 | 4.4:+86272219 | None:intergenic |
| GGTCTGCGAAGTAGGCTATA+AGG | 0.432562 | 4.4:-86269589 | MS.gene052793:CDS |
| AAGGAGTATGATCTACCAAT+AGG | 0.443273 | 4.4:-86269684 | MS.gene052793:CDS |
| AGGAAAGCTAGCAGACATAG+AGG | 0.449690 | 4.4:-86269517 | MS.gene052793:CDS |
| ATTCCTCAGGTCTGCGAAGT+AGG | 0.457321 | 4.4:-86269597 | MS.gene052793:CDS |
| CACATAGAGCTTCGATCCCT+CGG | 0.465720 | 4.4:+86269446 | None:intergenic |
| TCACGAGGAAAGATTCCTAT+TGG | 0.469668 | 4.4:+86269669 | None:intergenic |
| TACGAATTCAACGAAGAGAC+TGG | 0.481424 | 4.4:-86269636 | MS.gene052793:CDS |
| GCTTGAAGTCTTCATTCCTC+AGG | 0.483186 | 4.4:-86269610 | MS.gene052793:CDS |
| GATCAAGTATTCAACAAGGT+TGG | 0.497292 | 4.4:-86272244 | MS.gene052793:CDS |
| GAAGACAAAAGTTATTATCT+GGG | 0.508796 | 4.4:-86269490 | MS.gene052793:CDS |
| GCATATGATGTTACAAGAGA+TGG | 0.523342 | 4.4:-86269390 | MS.gene052793:CDS |
| TCGAAGCTCTATGTGACTGC+TGG | 0.534882 | 4.4:-86269438 | MS.gene052793:CDS |
| GCATGAAGAAAACAAGGAGT+AGG | 0.544902 | 4.4:-86269416 | MS.gene052793:CDS |
| GTTACAGGTTATCTGGAGAA+AGG | 0.545382 | 4.4:-86269537 | MS.gene052793:CDS |
| TCATACTCCTTTAACAACTC+TGG | 0.548889 | 4.4:+86269696 | None:intergenic |
| TCACTGTCGAGCAGTATTGA+AGG | 0.553445 | 4.4:-86271076 | MS.gene052793:CDS |
| CTGCTGGCATGAAGAAAACA+AGG | 0.561931 | 4.4:-86269422 | MS.gene052793:CDS |
| TACATTGATTTCATCACCGA+CGG | 0.565687 | 4.4:+86272180 | None:intergenic |
| CTCCAGATAACCTGTAACAG+TGG | 0.588118 | 4.4:+86269542 | None:intergenic |
| CATGAAGAAAACAAGGAGTA+GGG | 0.600568 | 4.4:-86269415 | MS.gene052793:CDS |
| AGCAAGGAGCTTAATTCCGT+CGG | 0.601708 | 4.4:-86272196 | MS.gene052793:CDS |
| TCGTAGTTTGTTGCATCACG+AGG | 0.603536 | 4.4:+86269654 | None:intergenic |
| GGAAAGCTAGCAGACATAGA+GGG | 0.604204 | 4.4:-86269516 | MS.gene052793:CDS |
| GTATTGAAGGCGGAACCAAA+TGG | 0.604305 | 4.4:-86271063 | MS.gene052793:CDS |
| GTTCAATCAGAAAGCCAGCA+AGG | 0.622010 | 4.4:-86272212 | MS.gene052793:CDS |
| TGAAGGCGGAACCAAATGGT+TGG | 0.628584 | 4.4:-86271059 | MS.gene052793:CDS |
| TAGCCTACTTCGCAGACCTG+AGG | 0.660590 | 4.4:+86269594 | None:intergenic |
| AGTGGTGAAGAAACGCAAGA+CGG | 0.697268 | 4.4:+86269560 | None:intergenic |
| CTGTCGAGCAGTATTGAAGG+CGG | 0.721925 | 4.4:-86271073 | MS.gene052793:CDS |
| AATGGATCAAGTATTCAACA+AGG | 0.730089 | 4.4:-86272248 | MS.gene052793:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CCAAAAAAAATTAATAATTT+TGG | + | chr4.4:86269521-86269540 | None:intergenic | 10.0% |
| !!! | CCAAAATTATTAATTTTTTT+TGG | - | chr4.4:86269518-86269537 | MS.gene052793:CDS | 10.0% |
| !! | AAAATAATTAAACAGTGAAA+AGG | - | chr4.4:86271394-86271413 | MS.gene052793:intron | 15.0% |
| !! | TCTAATAACAAAATTATAGA+AGG | + | chr4.4:86271529-86271548 | None:intergenic | 15.0% |
| !! | AAAAAACTGGAAAATTGAAA+AGG | + | chr4.4:86269474-86269493 | None:intergenic | 20.0% |
| !! | AAAAACTGGAAAATTGAAAA+GGG | + | chr4.4:86269473-86269492 | None:intergenic | 20.0% |
| !! | AATAAGTATAAACATCATGA+AGG | - | chr4.4:86271659-86271678 | MS.gene052793:intron | 20.0% |
| !! | AGATGATGAATATAAAAAAC+TGG | + | chr4.4:86269487-86269506 | None:intergenic | 20.0% |
| !! | ATAAGTATAAACATCATGAA+GGG | - | chr4.4:86271660-86271679 | MS.gene052793:intron | 20.0% |
| !! | ATCAATTGAATTGAATTGAT+GGG | - | chr4.4:86269584-86269603 | MS.gene052793:CDS | 20.0% |
| !! | ATTTAATTCTGATTAAGCAA+GGG | - | chr4.4:86270293-86270312 | MS.gene052793:intron | 20.0% |
| !! | TATTTAATTCTGATTAAGCA+AGG | - | chr4.4:86270292-86270311 | MS.gene052793:intron | 20.0% |
| !! | TTAATATACACCTTAGTAAT+TGG | - | chr4.4:86271151-86271170 | MS.gene052793:intron | 20.0% |
| !! | TTCTATCAATTTCTCAATTT+GGG | + | chr4.4:86270701-86270720 | None:intergenic | 20.0% |
| !! | TTTCTATCAATTTCTCAATT+TGG | + | chr4.4:86270702-86270721 | None:intergenic | 20.0% |
| !!! | AAGATATCTGAATTTTGAAT+TGG | - | chr4.4:86269635-86269654 | MS.gene052793:CDS | 20.0% |
| !!! | GGATATATTTCTATATTGAA+AGG | - | chr4.4:86271853-86271872 | MS.gene052793:intron | 20.0% |
| ! | AAAACTGGAAAATTGAAAAG+GGG | + | chr4.4:86269472-86269491 | None:intergenic | 25.0% |
| ! | AAATTTAGTACTTTGAACCA+TGG | - | chr4.4:86271250-86271269 | MS.gene052793:intron | 25.0% |
| ! | AACAAACATAAACATCATTG+TGG | + | chr4.4:86269673-86269692 | None:intergenic | 25.0% |
| ! | AAGCAATGAAAATTCATCTT+TGG | + | chr4.4:86270478-86270497 | None:intergenic | 25.0% |
| ! | ACAATGATGTTTATGTTTGT+TGG | - | chr4.4:86269672-86269691 | MS.gene052793:CDS | 25.0% |
| ! | ACTTAATTATATCACTTTGC+AGG | - | chr4.4:86271877-86271896 | MS.gene052793:intron | 25.0% |
| ! | ATAAATGTTTGAGCAACATA+TGG | + | chr4.4:86270614-86270633 | None:intergenic | 25.0% |
| ! | ATGTTTATACTTATTGCTTG+AGG | + | chr4.4:86271654-86271673 | None:intergenic | 25.0% |
| ! | ATTGGAAGGAAAAATTGAAT+TGG | + | chr4.4:86271078-86271097 | None:intergenic | 25.0% |
| ! | GAAGACAAAAGTTATTATCT+GGG | - | chr4.4:86272125-86272144 | MS.gene052793:intron | 25.0% |
| ! | GAATTGTCTAATTATCCAAA+AGG | - | chr4.4:86271624-86271643 | MS.gene052793:intron | 25.0% |
| ! | GATCAATTGAATTGAATTGA+TGG | - | chr4.4:86269583-86269602 | MS.gene052793:CDS | 25.0% |
| ! | TAAGTATAAACATCATGAAG+GGG | - | chr4.4:86271661-86271680 | MS.gene052793:intron | 25.0% |
| ! | TAATTAGACAATTCATGAAG+TGG | + | chr4.4:86271618-86271637 | None:intergenic | 25.0% |
| ! | TCTATTTGACATAGCAATAA+TGG | - | chr4.4:86271811-86271830 | MS.gene052793:intron | 25.0% |
| ! | TGAAGACAAAAGTTATTATC+TGG | - | chr4.4:86272124-86272143 | MS.gene052793:intron | 25.0% |
| ! | TTAATGAGATGATTCTGTTA+CGG | - | chr4.4:86270182-86270201 | MS.gene052793:intron | 25.0% |
| ! | TTAGAGAAGAAATTATCATG+CGG | + | chr4.4:86271325-86271344 | None:intergenic | 25.0% |
| ! | TTGAGAAATTGATAGAAAAC+TGG | - | chr4.4:86270704-86270723 | MS.gene052793:intron | 25.0% |
| ! | TTGATGTAATTACATGCAAT+GGG | + | chr4.4:86271102-86271121 | None:intergenic | 25.0% |
| ! | TTGGAAGGAAAAATTGAATT+GGG | + | chr4.4:86271077-86271096 | None:intergenic | 25.0% |
| !! | AAAGATGAATTTTCATTGCT+TGG | - | chr4.4:86270477-86270496 | MS.gene052793:intron | 25.0% |
| !! | AATTTACAAGCCTATTTTGT+AGG | - | chr4.4:86271040-86271059 | MS.gene052793:intron | 25.0% |
| !! | ATTTACAAGCCTATTTTGTA+GGG | - | chr4.4:86271041-86271060 | MS.gene052793:intron | 25.0% |
| !! | GGTCTGTTTATAAGTTATTT+TGG | - | chr4.4:86271274-86271293 | MS.gene052793:intron | 25.0% |
| !! | TGACTCATAAATACATTTTC+AGG | + | chr4.4:86271010-86271029 | None:intergenic | 25.0% |
| !!! | TATCTCTAAAACTGTAGTAA+TGG | + | chr4.4:86271724-86271743 | None:intergenic | 25.0% |
| !!! | TTTTAGGTGATTTTAAGTAC+TGG | - | chr4.4:86269991-86270010 | MS.gene052793:intron | 25.0% |
| AAATAAAGTAGAACCATTGG+TGG | + | chr4.4:86271593-86271612 | None:intergenic | 30.0% | |
| ATTCATCAAAAACTAAGAGC+TGG | + | chr4.4:86270063-86270082 | None:intergenic | 30.0% | |
| ATTGATCAAATATAACAGCG+TGG | + | chr4.4:86269570-86269589 | None:intergenic | 30.0% | |
| CAGAAAGGTAAGGAAAAAAT+TGG | + | chr4.4:86270901-86270920 | None:intergenic | 30.0% | |
| CCACATCTACAAGTAAAATT+AGG | + | chr4.4:86270123-86270142 | None:intergenic | 30.0% | |
| GAAATGGAGAGAATAAACAA+TGG | + | chr4.4:86271699-86271718 | None:intergenic | 30.0% | |
| GAGAAATAAAGTAGAACCAT+TGG | + | chr4.4:86271596-86271615 | None:intergenic | 30.0% | |
| GATTTCAAATCATGTGACAA+AGG | + | chr4.4:86271786-86271805 | None:intergenic | 30.0% | |
| GTTGATGTAATTACATGCAA+TGG | + | chr4.4:86271103-86271122 | None:intergenic | 30.0% | |
| TAATTGAACCTCATGGAAAT+TGG | - | chr4.4:86269542-86269561 | MS.gene052793:CDS | 30.0% | |
| TATGTGCACTAATCTTACAA+TGG | - | chr4.4:86271190-86271209 | MS.gene052793:intron | 30.0% | |
| TCAAAAGTCACCAATTACTA+AGG | + | chr4.4:86271164-86271183 | None:intergenic | 30.0% | |
| TCATTCTAAATCCAAAACAC+AGG | + | chr4.4:86270805-86270824 | None:intergenic | 30.0% | |
| TGAAATCTTAAATGTTGCAC+AGG | + | chr4.4:86270660-86270679 | None:intergenic | 30.0% | |
| TGATGAATAAGTCATGACAT+CGG | - | chr4.4:86270075-86270094 | MS.gene052793:intron | 30.0% | |
| TGATGTAATTACATGCAATG+GGG | + | chr4.4:86271101-86271120 | None:intergenic | 30.0% | |
| TTTGAGCAACATATGGAAAT+AGG | + | chr4.4:86270607-86270626 | None:intergenic | 30.0% | |
| ! | AACTGTAGTAATGGAAGAAA+TGG | + | chr4.4:86271715-86271734 | None:intergenic | 30.0% |
| ! | CCTAATTTTACTTGTAGATG+TGG | - | chr4.4:86270120-86270139 | MS.gene052793:intron | 30.0% |
| ! | GGTATTTTGTACAACATCAA+AGG | - | chr4.4:86271832-86271851 | MS.gene052793:intron | 30.0% |
| ! | TTGCTTGTCGTTAGAATTTT+AGG | - | chr4.4:86269975-86269994 | MS.gene052793:intron | 30.0% |
| ! | TTTCTCAATTTGGGATTACA+AGG | + | chr4.4:86270692-86270711 | None:intergenic | 30.0% |
| ! | TTTTGGATAATTGAACCTCA+TGG | - | chr4.4:86269535-86269554 | MS.gene052793:CDS | 30.0% |
| !! | CAATTTTAAGTACTAGACCA+CGG | + | chr4.4:86269726-86269745 | None:intergenic | 30.0% |
| !! | GTAATTGGTGACTTTTGAAA+CGG | - | chr4.4:86271166-86271185 | MS.gene052793:intron | 30.0% |
| !!! | ACATTTATCTTTTCAAGTCC+TGG | - | chr4.4:86270626-86270645 | MS.gene052793:intron | 30.0% |
| !!! | TTTCCTTGTTTTTGTTGAAC+TGG | + | chr4.4:86269822-86269841 | None:intergenic | 30.0% |
| AAACTGAAAATAGTCAGCGT+AGG | - | chr4.4:86270839-86270858 | MS.gene052793:intron | 35.0% | |
| AACCATGTTTAGATGCTTTG+CGG | - | chr4.4:86271120-86271139 | MS.gene052793:intron | 35.0% | |
| AACTGAAAATAGTCAGCGTA+GGG | - | chr4.4:86270840-86270859 | MS.gene052793:intron | 35.0% | |
| AACTTATAAACAGACCACCA+TGG | + | chr4.4:86271270-86271289 | None:intergenic | 35.0% | |
| AGGAAAAAATTGGACATGAG+AGG | + | chr4.4:86270891-86270910 | None:intergenic | 35.0% | |
| AGTGAAGCTGTATGAGAAAT+AGG | - | chr4.4:86270214-86270233 | MS.gene052793:intron | 35.0% | |
| AGTGACTGCATATCAAAAGA+AGG | + | chr4.4:86270524-86270543 | None:intergenic | 35.0% | |
| ATAAACATCATGAAGGGGTT+AGG | - | chr4.4:86271666-86271685 | MS.gene052793:intron | 35.0% | |
| CAAGGAAAAATGAATACGTG+TGG | - | chr4.4:86269834-86269853 | MS.gene052793:intron | 35.0% | |
| CATGAAGAAAACAAGGAGTA+GGG | - | chr4.4:86272200-86272219 | MS.gene052793:CDS | 35.0% | |
| CATTACTCATCATCTCTAAC+AGG | + | chr4.4:86270399-86270418 | None:intergenic | 35.0% | |
| CTAAATCCAAAACACAGGTA+CGG | + | chr4.4:86270800-86270819 | None:intergenic | 35.0% | |
| CTAACTCATCCCTACAAAAT+AGG | + | chr4.4:86271053-86271072 | None:intergenic | 35.0% | |
| GAAAAAATTGGACATGAGAG+GGG | + | chr4.4:86270889-86270908 | None:intergenic | 35.0% | |
| GATCAAGTATTCAACAAGGT+TGG | - | chr4.4:86269371-86269390 | MS.gene052793:CDS | 35.0% | |
| GCATATGATGTTACAAGAGA+TGG | - | chr4.4:86272225-86272244 | MS.gene052793:CDS | 35.0% | |
| GGAAAAAATTGGACATGAGA+GGG | + | chr4.4:86270890-86270909 | None:intergenic | 35.0% | |
| GTACCAGTTCAACAAAAACA+AGG | - | chr4.4:86269816-86269835 | MS.gene052793:intron | 35.0% | |
| TAATTACATGCAATGGGGAT+TGG | + | chr4.4:86271096-86271115 | None:intergenic | 35.0% | |
| TACTTTGTTGACCAACCATT+TGG | + | chr4.4:86270570-86270589 | None:intergenic | 35.0% | |
| TCAAAACTGAACATGTGAGA+AGG | + | chr4.4:86270423-86270442 | None:intergenic | 35.0% | |
| TCAATGTGAGACTCAACAAA+GGG | + | chr4.4:86270976-86270995 | None:intergenic | 35.0% | |
| TCATACTCCTTTAACAACTC+TGG | + | chr4.4:86271922-86271941 | None:intergenic | 35.0% | |
| TCATCTCTAACAGGAAGATA+AGG | + | chr4.4:86270390-86270409 | None:intergenic | 35.0% | |
| TCCTTTAACAACTCTGGTAA+TGG | + | chr4.4:86271916-86271935 | None:intergenic | 35.0% | |
| TGTGGATGAGATATAGACAT+TGG | - | chr4.4:86270138-86270157 | MS.gene052793:intron | 35.0% | |
| TTCAATGTGAGACTCAACAA+AGG | + | chr4.4:86270977-86270996 | None:intergenic | 35.0% | |
| TTTAGTACTTTGAACCATGG+TGG | - | chr4.4:86271253-86271272 | MS.gene052793:intron | 35.0% | |
| ! | AAGGAGTATGATCTACCAAT+AGG | - | chr4.4:86271931-86271950 | MS.gene052793:intron | 35.0% |
| ! | ATTGCTTGAGGAAAACCTTT+TGG | + | chr4.4:86271642-86271661 | None:intergenic | 35.0% |
| ! | CTATTTTGTAGGGATGAGTT+AGG | - | chr4.4:86271051-86271070 | MS.gene052793:CDS | 35.0% |
| ! | CTTTTCAAAGTAGAAGCTCA+CGG | - | chr4.4:86269764-86269783 | MS.gene052793:intron | 35.0% |
| ! | TGGTTGGTCAACAAAGTAAA+AGG | - | chr4.4:86270572-86270591 | MS.gene052793:intron | 35.0% |
| ! | TTGTTGGTAAGCAGATTCTA+TGG | - | chr4.4:86269688-86269707 | MS.gene052793:CDS | 35.0% |
| !! | TACATTGATTTCATCACCGA+CGG | + | chr4.4:86269438-86269457 | None:intergenic | 35.0% |
| AATAAGTCATGACATCGGTG+AGG | - | chr4.4:86270080-86270099 | MS.gene052793:intron | 40.0% | |
| ACCGTTAACTCTTACTTCAG+AGG | - | chr4.4:86269945-86269964 | MS.gene052793:intron | 40.0% | |
| AGAGATGAGAGAAGACAGAA+AGG | + | chr4.4:86270916-86270935 | None:intergenic | 40.0% | |
| AGATGATTCTGTTACGGTGA+GGG | - | chr4.4:86270188-86270207 | MS.gene052793:intron | 40.0% | |
| ATAAGTCATGACATCGGTGA+GGG | - | chr4.4:86270081-86270100 | MS.gene052793:intron | 40.0% | |
| ATGTAGTTTGAGTGCGATGT+AGG | - | chr4.4:86270267-86270286 | MS.gene052793:intron | 40.0% | |
| CTAAACCAGTTTGACACTAG+TGG | - | chr4.4:86271555-86271574 | MS.gene052793:intron | 40.0% | |
| GACTGCATATCAAAAGAAGG+TGG | + | chr4.4:86270521-86270540 | None:intergenic | 40.0% | |
| GCATGAAGAAAACAAGGAGT+AGG | - | chr4.4:86272199-86272218 | MS.gene052793:CDS | 40.0% | |
| GCCATTACCAGAGTTGTTAA+AGG | - | chr4.4:86271912-86271931 | MS.gene052793:intron | 40.0% | |
| GGAGAGAATAAACAATGGAG+AGG | + | chr4.4:86271694-86271713 | None:intergenic | 40.0% | |
| GGATCAAAATACTCGCAGTT+AGG | - | chr4.4:86270725-86270744 | MS.gene052793:intron | 40.0% | |
| GGCTTTCTGATTGAACCAAT+AGG | + | chr4.4:86269399-86269418 | None:intergenic | 40.0% | |
| GTATGAAGCAAAACCACCAA+TGG | - | chr4.4:86271577-86271596 | MS.gene052793:intron | 40.0% | |
| GTTACAGGTTATCTGGAGAA+AGG | - | chr4.4:86272078-86272097 | MS.gene052793:intron | 40.0% | |
| GTTTGTAACAAAGCTAACGC+TGG | + | chr4.4:86270368-86270387 | None:intergenic | 40.0% | |
| TACGAATTCAACGAAGAGAC+TGG | - | chr4.4:86271979-86271998 | MS.gene052793:intron | 40.0% | |
| TCAACAAGGTTGGATCCTAT+TGG | - | chr4.4:86269381-86269400 | MS.gene052793:CDS | 40.0% | |
| TCACGAGGAAAGATTCCTAT+TGG | + | chr4.4:86271949-86271968 | None:intergenic | 40.0% | |
| TCATACCACTAGTGTCAAAC+TGG | + | chr4.4:86271563-86271582 | None:intergenic | 40.0% | |
| TGAGAGAAGACAGAAAGGTA+AGG | + | chr4.4:86270911-86270930 | None:intergenic | 40.0% | |
| TGGTAAATGCAACACCAACA+GGG | + | chr4.4:86270043-86270062 | None:intergenic | 40.0% | |
| TTGTCTAACCGATAACGATC+AGG | - | chr4.4:86269893-86269912 | MS.gene052793:intron | 40.0% | |
| ! | AACCGCAAAGCATCTAAACA+TGG | + | chr4.4:86271125-86271144 | None:intergenic | 40.0% |
| ! | CGTGAGCTTCTACTTTGAAA+AGG | + | chr4.4:86269766-86269785 | None:intergenic | 40.0% |
| ! | TAGTATCCGTACCTGTGTTT+TGG | - | chr4.4:86270791-86270810 | MS.gene052793:intron | 40.0% |
| !! | GCCTCTGAAGTAAGAGTTAA+CGG | + | chr4.4:86269949-86269968 | None:intergenic | 40.0% |
| !! | TTTTAAGTACTAGACCACGG+TGG | + | chr4.4:86269723-86269742 | None:intergenic | 40.0% |
| !!! | TTTTAAGTACTGGTCCACTG+TGG | - | chr4.4:86270001-86270020 | MS.gene052793:intron | 40.0% |
| AGCAAGGAGCTTAATTCCGT+CGG | - | chr4.4:86269419-86269438 | MS.gene052793:CDS | 45.0% | |
| AGGAAAGCTAGCAGACATAG+AGG | - | chr4.4:86272098-86272117 | MS.gene052793:intron | 45.0% | |
| AGTGGTGAAGAAACGCAAGA+CGG | + | chr4.4:86272058-86272077 | None:intergenic | 45.0% | |
| ATGGATCTCCACAGTTAGTG+TGG | - | chr4.4:86271209-86271228 | MS.gene052793:intron | 45.0% | |
| CACCACTGTTACAGGTTATC+TGG | - | chr4.4:86272071-86272090 | MS.gene052793:intron | 45.0% | |
| CGTTTCTTCACCACTGTTAC+AGG | - | chr4.4:86272063-86272082 | MS.gene052793:intron | 45.0% | |
| CTCCAGATAACCTGTAACAG+TGG | + | chr4.4:86272076-86272095 | None:intergenic | 45.0% | |
| CTGCTGGCATGAAGAAAACA+AGG | - | chr4.4:86272193-86272212 | MS.gene052793:CDS | 45.0% | |
| CTGGTAAATGCAACACCAAC+AGG | + | chr4.4:86270044-86270063 | None:intergenic | 45.0% | |
| GACAGTGACCTGATCGTTAT+CGG | + | chr4.4:86269904-86269923 | None:intergenic | 45.0% | |
| GAGATGATTCTGTTACGGTG+AGG | - | chr4.4:86270187-86270206 | MS.gene052793:intron | 45.0% | |
| GATCTGCAACTTAGGTCTGT+AGG | - | chr4.4:86270327-86270346 | MS.gene052793:intron | 45.0% | |
| GCTAACGCTGGATTATGACA+CGG | + | chr4.4:86270356-86270375 | None:intergenic | 45.0% | |
| GCTTGAAGTCTTCATTCCTC+AGG | - | chr4.4:86272005-86272024 | MS.gene052793:intron | 45.0% | |
| GGAAAGCTAGCAGACATAGA+GGG | - | chr4.4:86272099-86272118 | MS.gene052793:intron | 45.0% | |
| GTATTGAAGGCGGAACCAAA+TGG | - | chr4.4:86270552-86270571 | MS.gene052793:intron | 45.0% | |
| GTTCAATCAGAAAGCCAGCA+AGG | - | chr4.4:86269403-86269422 | MS.gene052793:CDS | 45.0% | |
| TAAATGCAACACCAACAGGG+TGG | + | chr4.4:86270040-86270059 | None:intergenic | 45.0% | |
| TAAGTCATGACATCGGTGAG+GGG | - | chr4.4:86270082-86270101 | MS.gene052793:intron | 45.0% | |
| TACATGCAATGGGGATTGGA+AGG | + | chr4.4:86271092-86271111 | None:intergenic | 45.0% | |
| TGTTCAGTCCACACTAACTG+TGG | + | chr4.4:86271220-86271239 | None:intergenic | 45.0% | |
| ! | AGTGACAACCATTTTCTCCG+AGG | - | chr4.4:86272152-86272171 | MS.gene052793:intron | 45.0% |
| ! | GTGACAACCATTTTCTCCGA+GGG | - | chr4.4:86272153-86272172 | MS.gene052793:intron | 45.0% |
| ! | TCACTGTCGAGCAGTATTGA+AGG | - | chr4.4:86270539-86270558 | MS.gene052793:intron | 45.0% |
| ! | TCTTAGCCATGATGACGAGT+AGG | - | chr4.4:86269922-86269941 | MS.gene052793:intron | 45.0% |
| !! | TCGTAGTTTGTTGCATCACG+AGG | + | chr4.4:86271964-86271983 | None:intergenic | 45.0% |
| AACGGTCCTACTCGTCATCA+TGG | + | chr4.4:86269931-86269950 | None:intergenic | 50.0% | |
| AGCTAGGACGGTGTCTTGAT+CGG | - | chr4.4:86269794-86269813 | MS.gene052793:intron | 50.0% | |
| ATCAAGACACCGTCCTAGCT+AGG | + | chr4.4:86269794-86269813 | None:intergenic | 50.0% | |
| ATTCCTCAGGTCTGCGAAGT+AGG | - | chr4.4:86272018-86272037 | MS.gene052793:intron | 50.0% | |
| CACATAGAGCTTCGATCCCT+CGG | + | chr4.4:86272172-86272191 | None:intergenic | 50.0% | |
| CACCATAGAATCCACCCTGT+TGG | - | chr4.4:86270026-86270045 | MS.gene052793:intron | 50.0% | |
| CTTCGATCCCTCGGAGAAAA+TGG | + | chr4.4:86272163-86272182 | None:intergenic | 50.0% | |
| GACGGAATTAAGCTCCTTGC+TGG | + | chr4.4:86269420-86269439 | None:intergenic | 50.0% | |
| GATTCTATGGTGGTCCACAG+TGG | + | chr4.4:86270018-86270037 | None:intergenic | 50.0% | |
| GCGTGGTTCCAATTTCCATG+AGG | + | chr4.4:86269553-86269572 | None:intergenic | 50.0% | |
| GGTCTGCGAAGTAGGCTATA+AGG | - | chr4.4:86272026-86272045 | MS.gene052793:intron | 50.0% | |
| GTTGCACAGGTTTCATAGCC+AGG | + | chr4.4:86270647-86270666 | None:intergenic | 50.0% | |
| TCGAAGCTCTATGTGACTGC+TGG | - | chr4.4:86272177-86272196 | MS.gene052793:intron | 50.0% | |
| TGAAGGCGGAACCAAATGGT+TGG | - | chr4.4:86270556-86270575 | MS.gene052793:intron | 50.0% | |
| TTAAGCAAGGGAAAGACGCG+AGG | - | chr4.4:86270305-86270324 | MS.gene052793:intron | 50.0% | |
| ! | CAACAGGGTGGATTCTATGG+TGG | + | chr4.4:86270028-86270047 | None:intergenic | 50.0% |
| ! | CACCAACAGGGTGGATTCTA+TGG | + | chr4.4:86270031-86270050 | None:intergenic | 50.0% |
| ! | CTGTCGAGCAGTATTGAAGG+CGG | - | chr4.4:86270542-86270561 | MS.gene052793:intron | 50.0% |
| AAGACACCGTCCTAGCTAGG+AGG | + | chr4.4:86269791-86269810 | None:intergenic | 55.0% | |
| GACATCGGTGAGGGGAAATG+TGG | - | chr4.4:86270090-86270109 | MS.gene052793:intron | 55.0% | |
| GACGCGAGGATCTGCAACTT+AGG | - | chr4.4:86270319-86270338 | MS.gene052793:intron | 55.0% | |
| TAGCCTACTTCGCAGACCTG+AGG | + | chr4.4:86272024-86272043 | None:intergenic | 55.0% | |
| TATGGTCACGTTGTCCACCG+TGG | - | chr4.4:86269706-86269725 | MS.gene052793:CDS | 55.0% | |
| AGCTCACGGTCCTCCTAGCT+AGG | - | chr4.4:86269778-86269797 | MS.gene052793:intron | 60.0% | |
| CACGGTCCTCCTAGCTAGGA+CGG | - | chr4.4:86269782-86269801 | MS.gene052793:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 86269368 | 86272269 | 86269368 | ID=MS.gene052793 |
| chr4.4 | mRNA | 86269368 | 86272269 | 86269368 | ID=MS.gene052793.t1;Parent=MS.gene052793 |
| chr4.4 | exon | 86272183 | 86272269 | 86272183 | ID=MS.gene052793.t1.exon1;Parent=MS.gene052793.t1 |
| chr4.4 | CDS | 86272183 | 86272269 | 86272183 | ID=cds.MS.gene052793.t1;Parent=MS.gene052793.t1 |
| chr4.4 | exon | 86271044 | 86271098 | 86271044 | ID=MS.gene052793.t1.exon2;Parent=MS.gene052793.t1 |
| chr4.4 | CDS | 86271044 | 86271098 | 86271044 | ID=cds.MS.gene052793.t1;Parent=MS.gene052793.t1 |
| chr4.4 | exon | 86269368 | 86269738 | 86269368 | ID=MS.gene052793.t1.exon3;Parent=MS.gene052793.t1 |
| chr4.4 | CDS | 86269368 | 86269738 | 86269368 | ID=cds.MS.gene052793.t1;Parent=MS.gene052793.t1 |
| Gene Sequence |
| Protein sequence |
