Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70315.t1 | RZB96877.1 | 77.7 | 94 | 19 | 1 | 1 | 94 | 1 | 92 | 1.90E-29 | 139 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70315.t1 | I1KTA4 | 77.7 | 94 | 19 | 1 | 1 | 94 | 1 | 92 | 1.4e-29 | 139.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049356 | MS.gene70315 | 0.803051 | 4.19E-49 | -1.69E-46 |
| MS.gene049758 | MS.gene70315 | 0.830317 | 3.14E-55 | -1.69E-46 |
| MS.gene050128 | MS.gene70315 | 0.809588 | 1.76E-50 | -1.69E-46 |
| MS.gene050301 | MS.gene70315 | 0.812429 | 4.26E-51 | -1.69E-46 |
| MS.gene050670 | MS.gene70315 | 0.824994 | 5.97E-54 | -1.69E-46 |
| MS.gene050971 | MS.gene70315 | 0.823316 | 1.48E-53 | -1.69E-46 |
| MS.gene051860 | MS.gene70315 | 0.820112 | 8.15E-53 | -1.69E-46 |
| MS.gene052188 | MS.gene70315 | 0.841198 | 5.50E-58 | -1.69E-46 |
| MS.gene052253 | MS.gene70315 | 0.816082 | 6.64E-52 | -1.69E-46 |
| MS.gene05233 | MS.gene70315 | -0.807708 | 4.43E-50 | -1.69E-46 |
| MS.gene052340 | MS.gene70315 | 0.802586 | 5.23E-49 | -1.69E-46 |
| MS.gene052485 | MS.gene70315 | 0.801859 | 7.38E-49 | -1.69E-46 |
| MS.gene053836 | MS.gene70315 | 0.820178 | 7.87E-53 | -1.69E-46 |
| MS.gene054473 | MS.gene70315 | 0.803713 | 3.06E-49 | -1.69E-46 |
| MS.gene055422 | MS.gene70315 | 0.810983 | 8.79E-51 | -1.69E-46 |
| MS.gene057448 | MS.gene70315 | 0.815294 | 9.95E-52 | -1.69E-46 |
| MS.gene057449 | MS.gene70315 | 0.817494 | 3.20E-52 | -1.69E-46 |
| MS.gene057450 | MS.gene70315 | 0.821688 | 3.53E-53 | -1.69E-46 |
| MS.gene058082 | MS.gene70315 | 0.807153 | 5.81E-50 | -1.69E-46 |
| MS.gene05811 | MS.gene70315 | 0.822646 | 2.12E-53 | -1.69E-46 |
| MS.gene058660 | MS.gene70315 | 0.804405 | 2.19E-49 | -1.69E-46 |
| MS.gene058710 | MS.gene70315 | 0.80263 | 5.12E-49 | -1.69E-46 |
| MS.gene058928 | MS.gene70315 | 0.802189 | 6.31E-49 | -1.69E-46 |
| MS.gene05907 | MS.gene70315 | 0.803959 | 2.72E-49 | -1.69E-46 |
| MS.gene059366 | MS.gene70315 | 0.808765 | 2.64E-50 | -1.69E-46 |
| MS.gene059688 | MS.gene70315 | 0.819335 | 1.23E-52 | -1.69E-46 |
| MS.gene059692 | MS.gene70315 | 0.81458 | 1.43E-51 | -1.69E-46 |
| MS.gene059695 | MS.gene70315 | 0.805949 | 1.04E-49 | -1.69E-46 |
| MS.gene05984 | MS.gene70315 | 0.844018 | 9.80E-59 | -1.69E-46 |
| MS.gene061049 | MS.gene70315 | 0.8189 | 1.54E-52 | -1.69E-46 |
| MS.gene061051 | MS.gene70315 | -0.802176 | 6.35E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70315.t1 | MTR_8g091930 | 83.505 | 97 | 12 | 2 | 1 | 93 | 3 | 99 | 1.12e-48 | 153 |
| MS.gene70315.t1 | MTR_8g091930 | 86.022 | 93 | 9 | 2 | 1 | 89 | 3 | 95 | 3.47e-48 | 152 |
| MS.gene70315.t1 | MTR_8g091930 | 82.474 | 97 | 12 | 3 | 1 | 93 | 3 | 98 | 3.58e-46 | 146 |
| MS.gene70315.t1 | MTR_8g091930 | 84.946 | 93 | 9 | 3 | 1 | 89 | 3 | 94 | 1.13e-45 | 145 |
| MS.gene70315.t1 | MTR_3g094970 | 60.920 | 87 | 30 | 2 | 1 | 87 | 1 | 83 | 6.68e-31 | 107 |
| MS.gene70315.t1 | MTR_2g036020 | 52.542 | 59 | 22 | 1 | 1 | 59 | 1 | 53 | 3.59e-13 | 62.0 |
| MS.gene70315.t1 | MTR_2g035990 | 52.542 | 59 | 22 | 1 | 1 | 59 | 1 | 53 | 6.74e-13 | 61.2 |
| MS.gene70315.t1 | MTR_3g094970 | 56.140 | 57 | 21 | 2 | 31 | 87 | 1 | 53 | 1.23e-12 | 60.1 |
| MS.gene70315.t1 | MTR_2g035950 | 47.458 | 59 | 25 | 1 | 1 | 59 | 1 | 53 | 5.94e-11 | 56.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70315.t1 | AT5G09960 | 60.000 | 95 | 31 | 4 | 2 | 89 | 3 | 97 | 1.33e-29 | 105 |
| MS.gene70315.t1 | AT5G09960 | 58.889 | 90 | 30 | 4 | 7 | 89 | 6 | 95 | 7.92e-27 | 97.8 |
| MS.gene70315.t1 | AT5G64850 | 52.525 | 99 | 37 | 3 | 1 | 89 | 1 | 99 | 3.57e-23 | 88.6 |
| MS.gene70315.t1 | AT5G09960 | 53.623 | 69 | 27 | 3 | 26 | 89 | 1 | 69 | 3.36e-15 | 67.4 |
| MS.gene70315.t1 | AT5G19473 | 51.667 | 60 | 26 | 2 | 1 | 58 | 1 | 59 | 4.42e-13 | 62.4 |
| MS.gene70315.t1 | AT5G19473 | 50.000 | 54 | 25 | 1 | 7 | 58 | 41 | 94 | 8.13e-11 | 57.0 |
Find 40 sgRNAs with CRISPR-Local
Find 313 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAGGGTTAATGTTATATT+TGG | 0.081278 | 4.1:+9457669 | MS.gene70315:intron |
| TTTCTTACAGTGCTCTTCTT+TGG | 0.278856 | 4.1:+9456942 | MS.gene70315:intron |
| GGTTATCAGTACCACAGTTT+GGG | 0.313542 | 4.1:+9453839 | MS.gene70315:CDS |
| AGTACCACAGTTTGGGGATT+GGG | 0.346571 | 4.1:+9453846 | MS.gene70315:CDS |
| TCAGGGTTAATGTTATATTT+GGG | 0.349355 | 4.1:+9457670 | MS.gene70315:intron |
| TTCTTTGTTCCATAGATAGA+AGG | 0.383184 | 4.1:-9456999 | None:intergenic |
| GCCAATGCCGAGTCTATTCA+TGG | 0.385476 | 4.1:+9457753 | MS.gene70315:CDS |
| TTTGGGTTAAATGCTCTTGC+TGG | 0.386715 | 4.1:+9457687 | MS.gene70315:CDS |
| TGGTTATCAGTACCACAGTT+TGG | 0.392687 | 4.1:+9453838 | MS.gene70315:CDS |
| CAATGATGAAGAGTTCAATA+TGG | 0.395733 | 4.1:+9453966 | MS.gene70315:CDS |
| TGTCAACTACCTTCTATCTA+TGG | 0.397875 | 4.1:+9456990 | MS.gene70315:CDS |
| CAGTACCACAGTTTGGGGAT+TGG | 0.404887 | 4.1:+9453845 | MS.gene70315:CDS |
| TCTTCTTTGGCACCAACTCA+TGG | 0.407200 | 4.1:+9456955 | MS.gene70315:CDS |
| GCTGGAAGATCTTTGAAGCC+TGG | 0.428938 | 4.1:+9457705 | MS.gene70315:CDS |
| GAGAAGTCAAGTGAGTAATC+AGG | 0.438678 | 4.1:-9453886 | None:intergenic |
| GCTGACAGTGTTAGCACTGC+TGG | 0.440625 | 4.1:-9453998 | None:intergenic |
| GCACCAACTCATGGGAGAAC+GGG | 0.459316 | 4.1:+9456964 | MS.gene70315:CDS |
| TGCCGAGTCTATTCATGGTT+GGG | 0.461061 | 4.1:+9457758 | MS.gene70315:CDS |
| AGCGAGGGGTGTGTTGTTGT+TGG | 0.478532 | 4.1:-9454029 | None:intergenic |
| TCTATTCATGGTTGGGAACT+CGG | 0.480605 | 4.1:+9457765 | MS.gene70315:CDS |
| CTGGTTCTGCTGTTGCAGCT+TGG | 0.511802 | 4.1:+9457724 | MS.gene70315:CDS |
| AATATTTCAAGAGCAAGTCT+TGG | 0.521992 | 4.1:+9453943 | MS.gene70315:CDS |
| CTTCTTTGGCACCAACTCAT+GGG | 0.531617 | 4.1:+9456956 | MS.gene70315:CDS |
| ATGCCGAGTCTATTCATGGT+TGG | 0.541242 | 4.1:+9457757 | MS.gene70315:CDS |
| CAAGCTGCAACAGCAGAACC+AGG | 0.545637 | 4.1:-9457723 | None:intergenic |
| GGCACCAACTCATGGGAGAA+CGG | 0.546541 | 4.1:+9456963 | MS.gene70315:CDS |
| TTGGGGATTGGGATCAGAAG+GGG | 0.561605 | 4.1:+9453857 | MS.gene70315:CDS |
| GTTTGGGGATTGGGATCAGA+AGG | 0.575243 | 4.1:+9453855 | MS.gene70315:CDS |
| ATAGATAGAAGGTAGTTGAC+AGG | 0.576152 | 4.1:-9456988 | None:intergenic |
| ACCATGAATAGACTCGGCAT+TGG | 0.587436 | 4.1:-9457754 | None:intergenic |
| TTCCCAACCATGAATAGACT+CGG | 0.604728 | 4.1:-9457760 | None:intergenic |
| AACTTATGCACACTGTGCAA+AGG | 0.608665 | 4.1:+9457028 | MS.gene70315:CDS |
| GGACCCGTTCTCCCATGAGT+TGG | 0.610554 | 4.1:-9456967 | None:intergenic |
| TTTGGGGATTGGGATCAGAA+GGG | 0.623217 | 4.1:+9453856 | MS.gene70315:CDS |
| GAGTGTGTTTGATGATAGCG+AGG | 0.627338 | 4.1:-9454045 | None:intergenic |
| GTTATCAGTACCACAGTTTG+GGG | 0.627997 | 4.1:+9453840 | MS.gene70315:CDS |
| ACTCATGGATGCTCGCAAAG+AGG | 0.640813 | 4.1:+9452054 | None:intergenic |
| AGTGTGTTTGATGATAGCGA+GGG | 0.693478 | 4.1:-9454044 | None:intergenic |
| TGATCCCAATCCCCAAACTG+TGG | 0.704406 | 4.1:-9453850 | None:intergenic |
| GTGTGTTTGATGATAGCGAG+GGG | 0.723670 | 4.1:-9454043 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATAAACGAAAATTAAT+AGG | - | chr4.1:9455276-9455295 | None:intergenic | 10.0% |
| !! | TATTAATCTGTTAAATTAAA+TGG | + | chr4.1:9452322-9452341 | MS.gene70315:intron | 10.0% |
| !! | TGTTAAAATATATAGAAAAA+TGG | + | chr4.1:9453811-9453830 | MS.gene70315:intron | 10.0% |
| !! | TTATATATATGAAAAATGAA+TGG | + | chr4.1:9454294-9454313 | MS.gene70315:intron | 10.0% |
| !! | TTTATGAATTTACTTTAAAT+AGG | - | chr4.1:9456882-9456901 | None:intergenic | 10.0% |
| !!! | AATATTTTTTTAACAACTTT+GGG | + | chr4.1:9453364-9453383 | MS.gene70315:intron | 10.0% |
| !!! | ATTAAGTTTTGAAAATTTAA+AGG | - | chr4.1:9452183-9452202 | None:intergenic | 10.0% |
| !!! | ATTTATTAATCATTTTGTTT+TGG | + | chr4.1:9452392-9452411 | MS.gene70315:intron | 10.0% |
| !!! | TTAGTAATATTTTTTTTTCA+TGG | + | chr4.1:9454709-9454728 | MS.gene70315:intron | 10.0% |
| !! | AACTATAGAGTATAAATATA+CGG | - | chr4.1:9453180-9453199 | None:intergenic | 15.0% |
| !! | AATATATGAATAAAATGATG+AGG | + | chr4.1:9455165-9455184 | MS.gene70315:intron | 15.0% |
| !! | AATGATTAATAAATCTAAGT+CGG | - | chr4.1:9452386-9452405 | None:intergenic | 15.0% |
| !! | ATAGAATAGGATTTATAATA+AGG | - | chr4.1:9452900-9452919 | None:intergenic | 15.0% |
| !! | ATATAAAATGGAATAAACTT+AGG | + | chr4.1:9454186-9454205 | MS.gene70315:intron | 15.0% |
| !! | ATATATGAATAAAATGATGA+GGG | + | chr4.1:9455166-9455185 | MS.gene70315:intron | 15.0% |
| !! | TAAAATATATAGAAAAATGG+AGG | + | chr4.1:9453814-9453833 | MS.gene70315:intron | 15.0% |
| !! | TAATACCAAAAAAATAGAAT+AGG | - | chr4.1:9452913-9452932 | None:intergenic | 15.0% |
| !! | TTAGATTGAAAATTGAAAAA+TGG | + | chr4.1:9456334-9456353 | MS.gene70315:intron | 15.0% |
| !! | TTGAAATGAAAAAAAAACTT+TGG | + | chr4.1:9454917-9454936 | MS.gene70315:intron | 15.0% |
| !! | TTTGGACAAAAAATATAAAA+TGG | + | chr4.1:9454174-9454193 | MS.gene70315:intron | 15.0% |
| !!! | AATGTTATCTTAACAATTTT+TGG | + | chr4.1:9453144-9453163 | MS.gene70315:intron | 15.0% |
| !!! | ATATAATATTAGCCTTATAA+TGG | - | chr4.1:9453779-9453798 | None:intergenic | 15.0% |
| !!! | CAATATTTTTTTAACAACTT+TGG | + | chr4.1:9453363-9453382 | MS.gene70315:intron | 15.0% |
| !!! | CATCAAATTAGTATTTTAAT+GGG | - | chr4.1:9454547-9454566 | None:intergenic | 15.0% |
| !!! | TAAAATTAACATAGCTTTTT+TGG | + | chr4.1:9457391-9457410 | MS.gene70315:intron | 15.0% |
| !!! | TAAATCCTATTCTATTTTTT+TGG | + | chr4.1:9452905-9452924 | MS.gene70315:intron | 15.0% |
| !!! | TATAATATTAGCCTTATAAT+GGG | - | chr4.1:9453778-9453797 | None:intergenic | 15.0% |
| !!! | TTATTTATTTTTTGGTGATT+GGG | - | chr4.1:9455237-9455256 | None:intergenic | 15.0% |
| !!! | TTTATTTATTTTTTGGTGAT+TGG | - | chr4.1:9455238-9455257 | None:intergenic | 15.0% |
| !! | AATGAATGGATATATATTAG+TGG | + | chr4.1:9454308-9454327 | MS.gene70315:intron | 20.0% |
| !! | ATAAAAGAACATTAAGACTT+TGG | + | chr4.1:9454156-9454175 | MS.gene70315:intron | 20.0% |
| !! | ATAGTAATATCAAATAACAG+TGG | - | chr4.1:9452251-9452270 | None:intergenic | 20.0% |
| !! | ATATTACTACTTCAGATTTA+CGG | - | chr4.1:9454627-9454646 | None:intergenic | 20.0% |
| !! | ATGAATGGATATATATTAGT+GGG | + | chr4.1:9454309-9454328 | MS.gene70315:intron | 20.0% |
| !! | CTTACTTATTAAATACAATG+TGG | - | chr4.1:9457351-9457370 | None:intergenic | 20.0% |
| !! | GAACTAAAAATTGAATTTCA+TGG | + | chr4.1:9456721-9456740 | MS.gene70315:intron | 20.0% |
| !! | GTAATTAAAAAATGAACCAA+TGG | - | chr4.1:9453209-9453228 | None:intergenic | 20.0% |
| !! | GTCACATCATTATTTATAAA+TGG | + | chr4.1:9453245-9453264 | MS.gene70315:intron | 20.0% |
| !! | TATCTTGAAGATTATACAAT+TGG | + | chr4.1:9455683-9455702 | MS.gene70315:intron | 20.0% |
| !! | TGATATATTGTTAAATCATG+CGG | - | chr4.1:9456527-9456546 | None:intergenic | 20.0% |
| !! | TGATTTAACAATATATCAGT+AGG | + | chr4.1:9456529-9456548 | MS.gene70315:intron | 20.0% |
| !! | TTAGAACATGAAAAAAGAAA+CGG | + | chr4.1:9457161-9457180 | MS.gene70315:intron | 20.0% |
| !! | TTCCTACTGTTTAAATAAAA+AGG | - | chr4.1:9452996-9453015 | None:intergenic | 20.0% |
| !! | TTGACAAAAACAAATGTAAA+AGG | + | chr4.1:9455131-9455150 | MS.gene70315:intron | 20.0% |
| !!! | AAATTTTATTTGGTGACAAA+TGG | - | chr4.1:9456425-9456444 | None:intergenic | 20.0% |
| !!! | AGACATTACTATATTCTTTT+AGG | + | chr4.1:9454121-9454140 | MS.gene70315:intron | 20.0% |
| !!! | ATATCGATAAAACACTTTTA+AGG | - | chr4.1:9456559-9456578 | None:intergenic | 20.0% |
| !!! | CATTAATTTTGAGAAACATA+CGG | - | chr4.1:9457842-9457861 | None:intergenic | 20.0% |
| !!! | GACAGATTTTAAAAAAGAAA+AGG | + | chr4.1:9455637-9455656 | MS.gene70315:intron | 20.0% |
| !!! | GCATCAAATTAGTATTTTAA+TGG | - | chr4.1:9454548-9454567 | None:intergenic | 20.0% |
| !!! | GTACGAGTTTATTTATTTTT+TGG | - | chr4.1:9455245-9455264 | None:intergenic | 20.0% |
| !!! | TAATCATTTTGTTTTGGTTT+TGG | + | chr4.1:9452398-9452417 | MS.gene70315:intron | 20.0% |
| !!! | TATTTGAGTTTAAAGAATGT+TGG | + | chr4.1:9453046-9453065 | MS.gene70315:intron | 20.0% |
| !!! | TCATTATTTTTACCTTTTAC+AGG | - | chr4.1:9457438-9457457 | None:intergenic | 20.0% |
| !!! | TGATATTACTATTCACTTTT+TGG | + | chr4.1:9452259-9452278 | MS.gene70315:intron | 20.0% |
| !!! | TTGTTACAAATTTTCTACTT+AGG | - | chr4.1:9455786-9455805 | None:intergenic | 20.0% |
| !!! | TTTTATTCATATATTCGTCA+CGG | - | chr4.1:9455160-9455179 | None:intergenic | 20.0% |
| ! | AAAAATGTCAAAGTAGTATC+TGG | + | chr4.1:9456295-9456314 | MS.gene70315:intron | 25.0% |
| ! | AACAAAAAAACTAAGATGGA+TGG | + | chr4.1:9453101-9453120 | MS.gene70315:intron | 25.0% |
| ! | AAGTACTTCAATTTCTACTA+TGG | + | chr4.1:9457288-9457307 | MS.gene70315:intron | 25.0% |
| ! | AATAACAAAAAAATTTGGCG+TGG | - | chr4.1:9452477-9452496 | None:intergenic | 25.0% |
| ! | AATATTCATATGCCTGTAAA+AGG | + | chr4.1:9457423-9457442 | MS.gene70315:intron | 25.0% |
| ! | AATTTGACTATTTCATTGGT+TGG | - | chr4.1:9452623-9452642 | None:intergenic | 25.0% |
| ! | ACTTGACTTCTCAAAAATAA+GGG | + | chr4.1:9453897-9453916 | MS.gene70315:CDS | 25.0% |
| ! | AGTATAACGTATTAAAGACT+CGG | - | chr4.1:9456216-9456235 | None:intergenic | 25.0% |
| ! | AGTTGAAAAATTGATGTATG+TGG | - | chr4.1:9455952-9455971 | None:intergenic | 25.0% |
| ! | ATATATAGAAAAATGGAGGT+TGG | + | chr4.1:9453818-9453837 | MS.gene70315:intron | 25.0% |
| ! | ATGAGCATCAGAATTAATTA+TGG | + | chr4.1:9456751-9456770 | MS.gene70315:intron | 25.0% |
| ! | ATGATGAATGCATTAGTTAA+TGG | + | chr4.1:9457637-9457656 | MS.gene70315:intron | 25.0% |
| ! | ATGGAATAAACTTAGGAATA+TGG | + | chr4.1:9454193-9454212 | MS.gene70315:intron | 25.0% |
| ! | ATTAATGGTAGGTATATTTC+AGG | + | chr4.1:9456105-9456124 | MS.gene70315:intron | 25.0% |
| ! | CAAAATTATCACATAATGAG+AGG | - | chr4.1:9454883-9454902 | None:intergenic | 25.0% |
| ! | CAAATCAGCATTAGAAAATT+TGG | - | chr4.1:9457606-9457625 | None:intergenic | 25.0% |
| ! | CAATCCATTATAAAAACTGT+TGG | + | chr4.1:9454482-9454501 | MS.gene70315:intron | 25.0% |
| ! | CATGAATTTGACTATTTCAT+TGG | - | chr4.1:9452627-9452646 | None:intergenic | 25.0% |
| ! | CCAAAACAAAAAAACTAAGA+TGG | + | chr4.1:9453097-9453116 | MS.gene70315:intron | 25.0% |
| ! | CTCTATAGTTTATATACCAT+TGG | + | chr4.1:9453190-9453209 | MS.gene70315:intron | 25.0% |
| ! | GAAAGAGATGTAAAATGATA+TGG | + | chr4.1:9454350-9454369 | MS.gene70315:intron | 25.0% |
| ! | GAGATGAATAGTTGTAAATT+AGG | + | chr4.1:9455321-9455340 | MS.gene70315:intron | 25.0% |
| ! | GTACTATCTAAAGAAAAAAC+AGG | - | chr4.1:9455455-9455474 | None:intergenic | 25.0% |
| ! | TAGAAAATGATCCCATTATA+AGG | + | chr4.1:9453764-9453783 | MS.gene70315:intron | 25.0% |
| ! | TATTACTACTTCAGATTTAC+GGG | - | chr4.1:9454626-9454645 | None:intergenic | 25.0% |
| ! | TCAGGGTTAATGTTATATTT+GGG | + | chr4.1:9457670-9457689 | MS.gene70315:intron | 25.0% |
| ! | TGCTTATATTTCATTCTAGA+GGG | - | chr4.1:9455885-9455904 | None:intergenic | 25.0% |
| ! | TTAATGGTAGGTATATTTCA+GGG | + | chr4.1:9456106-9456125 | MS.gene70315:intron | 25.0% |
| ! | TTATCATGTAGATAGATACT+AGG | + | chr4.1:9454387-9454406 | MS.gene70315:intron | 25.0% |
| ! | TTCAGGGTTAATGTTATATT+TGG | + | chr4.1:9456122-9456141 | MS.gene70315:intron | 25.0% |
| ! | TTGCTTATATTTCATTCTAG+AGG | - | chr4.1:9455886-9455905 | None:intergenic | 25.0% |
| ! | TTGGTAAATGAATGTTTCAT+TGG | + | chr4.1:9456270-9456289 | MS.gene70315:intron | 25.0% |
| ! | TTTAACAAGCTTAGCATTAA+TGG | + | chr4.1:9456090-9456109 | MS.gene70315:intron | 25.0% |
| ! | TTTATTCATATATTCGTCAC+GGG | - | chr4.1:9455159-9455178 | None:intergenic | 25.0% |
| !! | AAGATTATACAATTGGTGTT+TGG | + | chr4.1:9455690-9455709 | MS.gene70315:intron | 25.0% |
| !! | ACATTCTTTTCATAGATAAG+AGG | + | chr4.1:9454458-9454477 | MS.gene70315:intron | 25.0% |
| !! | ACTTCTTTTCCATATTCTTT+TGG | + | chr4.1:9453391-9453410 | MS.gene70315:intron | 25.0% |
| !! | ATGACCAACAGTTTTTATAA+TGG | - | chr4.1:9454489-9454508 | None:intergenic | 25.0% |
| !! | CATTCTTTTCATAGATAAGA+GGG | + | chr4.1:9454459-9454478 | MS.gene70315:intron | 25.0% |
| !! | CTTCTTTTCCATATTCTTTT+GGG | + | chr4.1:9453392-9453411 | MS.gene70315:intron | 25.0% |
| !! | GAATTAATTATGGACTGATT+CGG | + | chr4.1:9456761-9456780 | MS.gene70315:intron | 25.0% |
| !! | GTCACCAAATAAAATTTTTG+AGG | + | chr4.1:9456428-9456447 | MS.gene70315:intron | 25.0% |
| !! | GTTTATATACTCATTTTCAG+CGG | + | chr4.1:9455478-9455497 | MS.gene70315:intron | 25.0% |
| !! | TATTTTGTTGCATAAAGTCA+CGG | - | chr4.1:9453648-9453667 | None:intergenic | 25.0% |
| !! | TTCTGGAAATGATTCTAAAT+GGG | + | chr4.1:9452970-9452989 | MS.gene70315:intron | 25.0% |
| !! | TTGAATCATAGTTCTATTGT+TGG | + | chr4.1:9456170-9456189 | MS.gene70315:intron | 25.0% |
| !! | TTTCTGGAAATGATTCTAAA+TGG | + | chr4.1:9452969-9452988 | MS.gene70315:intron | 25.0% |
| !!! | AGTAAATGTTTTATTCAGAG+TGG | - | chr4.1:9455862-9455881 | None:intergenic | 25.0% |
| !!! | CAAATTTTCTAATGCTGATT+TGG | + | chr4.1:9457604-9457623 | MS.gene70315:intron | 25.0% |
| !!! | CCATCTTAGTTTTTTTGTTT+TGG | - | chr4.1:9453100-9453119 | None:intergenic | 25.0% |
| !!! | CTTCTCAAGCTTTATTATAA+TGG | + | chr4.1:9454086-9454105 | MS.gene70315:intron | 25.0% |
| !!! | TAGTTTTTTTGTTTTGGAAG+AGG | - | chr4.1:9453094-9453113 | None:intergenic | 25.0% |
| !!! | TTTTTAGTTCCTATATAGTC+TGG | - | chr4.1:9456711-9456730 | None:intergenic | 25.0% |
| AAATAGGACCTTTAACTAAG+TGG | - | chr4.1:9456866-9456885 | None:intergenic | 30.0% | |
| AAATATGAGTGCATTACGTA+TGG | + | chr4.1:9454655-9454674 | MS.gene70315:intron | 30.0% | |
| AATATTTCAAGAGCAAGTCT+TGG | + | chr4.1:9453943-9453962 | MS.gene70315:CDS | 30.0% | |
| AATGGTCACATACACAAATT+CGG | + | chr4.1:9452340-9452359 | MS.gene70315:intron | 30.0% | |
| ACTATGATTCAAAGATCTTC+CGG | - | chr4.1:9456162-9456181 | None:intergenic | 30.0% | |
| AGAGTATAAATATACGGTGT+TGG | - | chr4.1:9453174-9453193 | None:intergenic | 30.0% | |
| AGTAAGAACTACACTATTCA+TGG | + | chr4.1:9456239-9456258 | MS.gene70315:intron | 30.0% | |
| ATAATACAACGATCACTATG+TGG | - | chr4.1:9452305-9452324 | None:intergenic | 30.0% | |
| ATATCGATCTACGTAATTAG+TGG | + | chr4.1:9454995-9455014 | MS.gene70315:intron | 30.0% | |
| ATCTAAGCAATTATCACCAA+AGG | - | chr4.1:9454856-9454875 | None:intergenic | 30.0% | |
| ATCTACGTAATTAGTGGTAA+AGG | + | chr4.1:9455001-9455020 | MS.gene70315:intron | 30.0% | |
| ATGATAAACAAATCACCTTC+GGG | + | chr4.1:9455353-9455372 | MS.gene70315:intron | 30.0% | |
| ATGATGTGACTATAAAAGAG+AGG | - | chr4.1:9453235-9453254 | None:intergenic | 30.0% | |
| CAAATTCATGATTCATCACT+AGG | + | chr4.1:9452637-9452656 | MS.gene70315:intron | 30.0% | |
| CAATGATGAAGAGTTCAATA+TGG | + | chr4.1:9453966-9453985 | MS.gene70315:CDS | 30.0% | |
| CACTTGACTTCTCAAAAATA+AGG | + | chr4.1:9453896-9453915 | MS.gene70315:CDS | 30.0% | |
| CCTTTGAATAACGATGATAA+CGG | + | chr4.1:9452549-9452568 | MS.gene70315:intron | 30.0% | |
| CTCATAAGTACATTATACAC+CGG | + | chr4.1:9453565-9453584 | MS.gene70315:intron | 30.0% | |
| CTGCAAAATAGATTGATCTT+AGG | + | chr4.1:9454588-9454607 | MS.gene70315:intron | 30.0% | |
| GAGAAGAATAATCTTACAGT+TGG | - | chr4.1:9454072-9454091 | None:intergenic | 30.0% | |
| GAGTTCAAATGTTCTACATT+TGG | + | chr4.1:9453593-9453612 | MS.gene70315:intron | 30.0% | |
| GATGATAAACAAATCACCTT+CGG | + | chr4.1:9455352-9455371 | MS.gene70315:intron | 30.0% | |
| GGCGATTATTCATTAGAAAA+AGG | - | chr4.1:9455544-9455563 | None:intergenic | 30.0% | |
| GTAATCATGTAATAGCTTCA+AGG | + | chr4.1:9455026-9455045 | MS.gene70315:intron | 30.0% | |
| GTATGTAATGTATGTATCCT+CGG | + | chr4.1:9457116-9457135 | MS.gene70315:intron | 30.0% | |
| GTATTTGTCCCAAAAGAATA+TGG | - | chr4.1:9453403-9453422 | None:intergenic | 30.0% | |
| GTTAATGGTAGGTATATTTC+AGG | + | chr4.1:9457652-9457671 | MS.gene70315:intron | 30.0% | |
| TAAACGAAAATTAATAGGCC+AGG | - | chr4.1:9455271-9455290 | None:intergenic | 30.0% | |
| TACATTGAAGAATAATGTCG+AGG | + | chr4.1:9454220-9454239 | MS.gene70315:intron | 30.0% | |
| TCAAAATTAATGCCTAGCTT+CGG | + | chr4.1:9457850-9457869 | MS.gene70315:intron | 30.0% | |
| TCATAAGTACATTATACACC+GGG | + | chr4.1:9453566-9453585 | MS.gene70315:intron | 30.0% | |
| TCCAGCCAAAAAATATAAGA+AGG | + | chr4.1:9454262-9454281 | MS.gene70315:intron | 30.0% | |
| TCTCAAAAATAAGGGAAACA+AGG | + | chr4.1:9453905-9453924 | MS.gene70315:CDS | 30.0% | |
| TGAATGCATTAGTTAATGGT+AGG | + | chr4.1:9457641-9457660 | MS.gene70315:intron | 30.0% | |
| TGTACATGACCATAAAAATC+AGG | - | chr4.1:9454781-9454800 | None:intergenic | 30.0% | |
| TGTTGGAGTAGAATATTGTA+TGG | - | chr4.1:9457472-9457491 | None:intergenic | 30.0% | |
| TTCTTTGTTCCATAGATAGA+AGG | - | chr4.1:9457002-9457021 | None:intergenic | 30.0% | |
| TTTCGTACTTGTAAGATTTC+TGG | + | chr4.1:9452953-9452972 | MS.gene70315:intron | 30.0% | |
| ! | AACAGTGGATTTCATTGAAA+GGG | - | chr4.1:9452236-9452255 | None:intergenic | 30.0% |
| ! | ATTTCTGAAGATTCTGGATA+GGG | + | chr4.1:9454816-9454835 | MS.gene70315:intron | 30.0% |
| ! | CCAGAAAAACAATTTGCTTT+AGG | - | chr4.1:9455302-9455321 | None:intergenic | 30.0% |
| ! | CCAGCCTCAAAAATTTTATT+TGG | - | chr4.1:9456435-9456454 | None:intergenic | 30.0% |
| ! | CTGCAGTTCAAGTTAAAATT+TGG | - | chr4.1:9455733-9455752 | None:intergenic | 30.0% |
| ! | GTCAAATAGTTGTTACCTTT+TGG | + | chr4.1:9453300-9453319 | MS.gene70315:intron | 30.0% |
| ! | GTTTCATATGTGATTTTGCA+AGG | - | chr4.1:9452130-9452149 | None:intergenic | 30.0% |
| ! | TAACAGTGGATTTCATTGAA+AGG | - | chr4.1:9452237-9452256 | None:intergenic | 30.0% |
| ! | TATACAATTGGTGTTTGGAA+AGG | + | chr4.1:9455695-9455714 | MS.gene70315:intron | 30.0% |
| !! | ATGTTCTAAAACATACTGAG+AGG | - | chr4.1:9457150-9457169 | None:intergenic | 30.0% |
| !! | CACAGTTGGCAAATTTTAAT+TGG | - | chr4.1:9452832-9452851 | None:intergenic | 30.0% |
| !! | CCTAAAGCAAATTGTTTTTC+TGG | + | chr4.1:9455299-9455318 | MS.gene70315:intron | 30.0% |
| !! | GGCCTTTTTATTTAAACAGT+AGG | + | chr4.1:9452991-9453010 | MS.gene70315:intron | 30.0% |
| !! | GTGTTATTTGAACATCCAAA+AGG | - | chr4.1:9453318-9453337 | None:intergenic | 30.0% |
| !! | TAATGGGTTTAACCACATAA+AGG | - | chr4.1:9454531-9454550 | None:intergenic | 30.0% |
| !!! | AAAGTCACGGTTTTTTTGAA+GGG | - | chr4.1:9453635-9453654 | None:intergenic | 30.0% |
| !!! | AATAAAATTTTTGAGGCTGG+AGG | + | chr4.1:9456435-9456454 | MS.gene70315:intron | 30.0% |
| !!! | AGAATTTTTCAAGACACAGT+TGG | - | chr4.1:9452846-9452865 | None:intergenic | 30.0% |
| !!! | CAAATTTTAACTTGAACTGC+AGG | + | chr4.1:9455731-9455750 | MS.gene70315:intron | 30.0% |
| !!! | CCAAATAAAATTTTTGAGGC+TGG | + | chr4.1:9456432-9456451 | MS.gene70315:intron | 30.0% |
| !!! | GCTTGCCTTCTTATATTTTT+TGG | - | chr4.1:9454270-9454289 | None:intergenic | 30.0% |
| !!! | TAAAGTCACGGTTTTTTTGA+AGG | - | chr4.1:9453636-9453655 | None:intergenic | 30.0% |
| !!! | TTTTTGGCTGGAAAAATATG+TGG | - | chr4.1:9454254-9454273 | None:intergenic | 30.0% |
| !!! | TTTTTTTTTCATGGCAGACA+AGG | + | chr4.1:9454718-9454737 | MS.gene70315:intron | 30.0% |
| AAAACATACTGAGAGGAAAC+AGG | - | chr4.1:9457143-9457162 | None:intergenic | 35.0% | |
| AACGATTGACCTTTCAACTA+CGG | - | chr4.1:9455912-9455931 | None:intergenic | 35.0% | |
| ACAAGCTTAGCATTAATGGT+AGG | + | chr4.1:9456094-9456113 | MS.gene70315:intron | 35.0% | |
| ACATACGGACAATTAGTTGA+AGG | - | chr4.1:9457827-9457846 | None:intergenic | 35.0% | |
| ACCCTTCAAATTGTAGAACT+CGG | - | chr4.1:9455565-9455584 | None:intergenic | 35.0% | |
| ACTTAGATAGGAGGAAACTA+TGG | + | chr4.1:9456654-9456673 | MS.gene70315:intron | 35.0% | |
| AGAACTACACTATTCATGGT+TGG | + | chr4.1:9456243-9456262 | MS.gene70315:intron | 35.0% | |
| AGAATCTTCAGAAATCTACG+AGG | - | chr4.1:9454811-9454830 | None:intergenic | 35.0% | |
| AGGAGGAAACTATGGTTTAT+TGG | + | chr4.1:9456662-9456681 | MS.gene70315:intron | 35.0% | |
| ATAGATAGAAGGTAGTTGAC+AGG | - | chr4.1:9456991-9457010 | None:intergenic | 35.0% | |
| ATGCATCAGATACAAGATGA+TGG | - | chr4.1:9456476-9456495 | None:intergenic | 35.0% | |
| ATGCCAAATCCAGACTATAT+AGG | + | chr4.1:9456699-9456718 | MS.gene70315:intron | 35.0% | |
| ATTAGTATAAGAGCCGTGTT+AGG | - | chr4.1:9455839-9455858 | None:intergenic | 35.0% | |
| CCGTTATCATCGTTATTCAA+AGG | - | chr4.1:9452552-9452571 | None:intergenic | 35.0% | |
| CTTCAAGGACAATATTACGT+AGG | + | chr4.1:9455041-9455060 | MS.gene70315:intron | 35.0% | |
| GAACTACACTATTCATGGTT+GGG | + | chr4.1:9456244-9456263 | MS.gene70315:intron | 35.0% | |
| GACAATATTACGTAGGAATC+AGG | + | chr4.1:9455048-9455067 | MS.gene70315:intron | 35.0% | |
| GATAGTAGTCTGATTCAGTT+TGG | - | chr4.1:9457578-9457597 | None:intergenic | 35.0% | |
| GATATAATCAAATCGCATGC+AGG | + | chr4.1:9456574-9456593 | MS.gene70315:intron | 35.0% | |
| GGATGGCAATTATTAACGAA+AGG | + | chr4.1:9453118-9453137 | MS.gene70315:intron | 35.0% | |
| GTTATACCTCACACATTTCA+CGG | - | chr4.1:9455098-9455117 | None:intergenic | 35.0% | |
| GTTCCTATATAGTCTGGATT+TGG | - | chr4.1:9456705-9456724 | None:intergenic | 35.0% | |
| TAAGAGCAATGCTATATCTC+TGG | + | chr4.1:9452695-9452714 | MS.gene70315:intron | 35.0% | |
| TATTGTTGGAGCTTGGAATT+AGG | + | chr4.1:9456184-9456203 | MS.gene70315:intron | 35.0% | |
| TCTTTCAAACCAGTGAATCT+GGG | - | chr4.1:9454336-9454355 | None:intergenic | 35.0% | |
| TGATAAACAAATCACCTTCG+GGG | + | chr4.1:9455354-9455373 | MS.gene70315:intron | 35.0% | |
| TGTCAACTACCTTCTATCTA+TGG | + | chr4.1:9456990-9457009 | MS.gene70315:CDS | 35.0% | |
| TGTGGCTGAAAAAAATGAAG+TGG | + | chr4.1:9452793-9452812 | MS.gene70315:intron | 35.0% | |
| TTTCTTACAGTGCTCTTCTT+TGG | + | chr4.1:9456942-9456961 | MS.gene70315:intron | 35.0% | |
| ! | ATAGTTCTATTGTTGGAGCT+TGG | + | chr4.1:9456177-9456196 | MS.gene70315:intron | 35.0% |
| ! | GATTTCTGAAGATTCTGGAT+AGG | + | chr4.1:9454815-9454834 | MS.gene70315:intron | 35.0% |
| ! | GTGTGAAAGCCTGATTTTTA+TGG | + | chr4.1:9454769-9454788 | MS.gene70315:intron | 35.0% |
| ! | TATCTTGTTGATTACACAGC+TGG | + | chr4.1:9456066-9456085 | MS.gene70315:intron | 35.0% |
| ! | TCGTAGATTTCTGAAGATTC+TGG | + | chr4.1:9454810-9454829 | MS.gene70315:intron | 35.0% |
| ! | TTCATTGGTTGGTTAGTGAA+AGG | - | chr4.1:9452612-9452631 | None:intergenic | 35.0% |
| ! | TTTCTGAAGATTCTGGATAG+GGG | + | chr4.1:9454817-9454836 | MS.gene70315:intron | 35.0% |
| !! | GCAAGTTGAGCTACTATTTT+TGG | - | chr4.1:9457529-9457548 | None:intergenic | 35.0% |
| !! | GTTTAGTCTTAAATCGTGCA+AGG | - | chr4.1:9456041-9456060 | None:intergenic | 35.0% |
| !! | TTGGATCTTTGAAATTCACC+TGG | + | chr4.1:9452417-9452436 | MS.gene70315:intron | 35.0% |
| !!! | GCCTTCTTATATTTTTTGGC+TGG | - | chr4.1:9454266-9454285 | None:intergenic | 35.0% |
| !!! | TCTGTCAGTTTTGTTCTTCA+AGG | - | chr4.1:9455623-9455642 | None:intergenic | 35.0% |
| !!! | TTTTAACTTGAACTGCAGGA+AGG | + | chr4.1:9455735-9455754 | MS.gene70315:intron | 35.0% |
| AAAGTGATGTCTTCGTAAGC+TGG | - | chr4.1:9455509-9455528 | None:intergenic | 40.0% | |
| AACTGTTGGTCATGTGTCAT+TGG | + | chr4.1:9454496-9454515 | MS.gene70315:intron | 40.0% | |
| AACTTATGCACACTGTGCAA+AGG | + | chr4.1:9457028-9457047 | MS.gene70315:CDS | 40.0% | |
| AAGCAAAAGCCGTAGTTGAA+AGG | + | chr4.1:9455900-9455919 | MS.gene70315:intron | 40.0% | |
| ACTATTCATGGTTGGGAACT+TGG | + | chr4.1:9456251-9456270 | MS.gene70315:intron | 40.0% | |
| ACTGCAGGAAGGAACAAATA+TGG | + | chr4.1:9455746-9455765 | MS.gene70315:intron | 40.0% | |
| AGCATGTGATTACAAGAGAG+AGG | - | chr4.1:9452093-9452112 | None:intergenic | 40.0% | |
| AGTCTGTCTGCAGTATGTTT+CGG | - | chr4.1:9456637-9456656 | None:intergenic | 40.0% | |
| AGTTGAAAGGTCAATCGTTG+TGG | + | chr4.1:9455913-9455932 | MS.gene70315:intron | 40.0% | |
| ATCTTCAGAAATCTACGAGG+AGG | - | chr4.1:9454808-9454827 | None:intergenic | 40.0% | |
| ATGCATTTGTCAACAGCTTC+TGG | + | chr4.1:9456490-9456509 | MS.gene70315:intron | 40.0% | |
| ATGTGATTACAAGAGAGAGG+GGG | - | chr4.1:9452090-9452109 | None:intergenic | 40.0% | |
| CAACATTTGTGCGTGATTTC+TGG | - | chr4.1:9455415-9455434 | None:intergenic | 40.0% | |
| CATGTGATTACAAGAGAGAG+GGG | - | chr4.1:9452091-9452110 | None:intergenic | 40.0% | |
| CTATTTGCCACAATTCAAGG+AGG | + | chr4.1:9452770-9452789 | MS.gene70315:intron | 40.0% | |
| CTCTTTCAAACCAGTGAATC+TGG | - | chr4.1:9454337-9454356 | None:intergenic | 40.0% | |
| GAGAAGTCAAGTGAGTAATC+AGG | - | chr4.1:9453889-9453908 | None:intergenic | 40.0% | |
| GATAAACAAATCACCTTCGG+GGG | + | chr4.1:9455355-9455374 | MS.gene70315:intron | 40.0% | |
| GCACTATTTGCCACAATTCA+AGG | + | chr4.1:9452767-9452786 | MS.gene70315:intron | 40.0% | |
| GCATGTGATTACAAGAGAGA+GGG | - | chr4.1:9452092-9452111 | None:intergenic | 40.0% | |
| GCCGAGTTCTACAATTTGAA+GGG | + | chr4.1:9455561-9455580 | MS.gene70315:intron | 40.0% | |
| GGCAAATAGTGCATTGTGAT+TGG | - | chr4.1:9452759-9452778 | None:intergenic | 40.0% | |
| GGTTATCAGTACCACAGTTT+GGG | + | chr4.1:9453839-9453858 | MS.gene70315:CDS | 40.0% | |
| GTTATCAGTACCACAGTTTG+GGG | + | chr4.1:9453840-9453859 | MS.gene70315:CDS | 40.0% | |
| TAAATAAACTCGTACGCTCC+TGG | + | chr4.1:9455250-9455269 | MS.gene70315:intron | 40.0% | |
| TACGTATGGCACGAAATCTT+TGG | + | chr4.1:9454669-9454688 | MS.gene70315:intron | 40.0% | |
| TACTGCAGACAGACTTAGAT+AGG | + | chr4.1:9456642-9456661 | MS.gene70315:intron | 40.0% | |
| TCAAATCGCATGCAGGTATT+TGG | + | chr4.1:9456581-9456600 | MS.gene70315:intron | 40.0% | |
| TCTATTCATGGTTGGGAACT+CGG | + | chr4.1:9457765-9457784 | MS.gene70315:CDS | 40.0% | |
| TCTTCAGAAATCTACGAGGA+GGG | - | chr4.1:9454807-9454826 | None:intergenic | 40.0% | |
| TGCAGGTATTTGGATCAACT+TGG | + | chr4.1:9456591-9456610 | MS.gene70315:intron | 40.0% | |
| TGGTTATCAGTACCACAGTT+TGG | + | chr4.1:9453838-9453857 | MS.gene70315:CDS | 40.0% | |
| TTCCCAACCATGAATAGACT+CGG | - | chr4.1:9457763-9457782 | None:intergenic | 40.0% | |
| TTCGAATGAAATGCTCTTGC+CGG | + | chr4.1:9456140-9456159 | MS.gene70315:intron | 40.0% | |
| ! | ACTGTTGGTCATGTGTCATT+GGG | + | chr4.1:9454497-9454516 | MS.gene70315:intron | 40.0% |
| ! | AGTGTGTTTGATGATAGCGA+GGG | - | chr4.1:9454047-9454066 | None:intergenic | 40.0% |
| ! | ATACAAGATGATGGCCACTA+TGG | - | chr4.1:9456467-9456486 | None:intergenic | 40.0% |
| ! | TAGTGAAAGGAGTGTATGGT+TGG | - | chr4.1:9452599-9452618 | None:intergenic | 40.0% |
| ! | TCTAGTTGATGCACATGCAA+TGG | + | chr4.1:9454421-9454440 | MS.gene70315:intron | 40.0% |
| ! | TGGTTAGTGAAAGGAGTGTA+TGG | - | chr4.1:9452603-9452622 | None:intergenic | 40.0% |
| ! | TTCTGAAGATTCTGGATAGG+GGG | + | chr4.1:9454818-9454837 | MS.gene70315:intron | 40.0% |
| ! | TTTGGGTTAAATGCTCTTGC+TGG | + | chr4.1:9457687-9457706 | MS.gene70315:CDS | 40.0% |
| !! | CTTTGAAATTCACCTGGTGT+TGG | + | chr4.1:9452423-9452442 | MS.gene70315:intron | 40.0% |
| !! | GGAAAGCATCTAACTGTAGA+AGG | - | chr4.1:9452531-9452550 | None:intergenic | 40.0% |
| ACCATGAATAGACTCGGCAT+TGG | - | chr4.1:9457757-9457776 | None:intergenic | 45.0% | |
| ACGATCACTATGTGGATGCA+TGG | - | chr4.1:9452297-9452316 | None:intergenic | 45.0% | |
| ACTTCTCCGTGAAATGTGTG+AGG | + | chr4.1:9455089-9455108 | MS.gene70315:intron | 45.0% | |
| AGAAATGACTAATCCCCCGA+AGG | - | chr4.1:9455371-9455390 | None:intergenic | 45.0% | |
| AGCCGTGTTAGGATCAAGAA+GGG | - | chr4.1:9455828-9455847 | None:intergenic | 45.0% | |
| AGGACCTTTAACTAAGTGGC+AGG | - | chr4.1:9456862-9456881 | None:intergenic | 45.0% | |
| AGTACCACAGTTTGGGGATT+GGG | + | chr4.1:9453846-9453865 | MS.gene70315:CDS | 45.0% | |
| AGTAGTATCTGGTCTGCTAC+TGG | + | chr4.1:9456306-9456325 | MS.gene70315:intron | 45.0% | |
| ATGCCGAGTCTATTCATGGT+TGG | + | chr4.1:9457757-9457776 | MS.gene70315:CDS | 45.0% | |
| CACTGTGCAAAGGAAACTGT+AGG | + | chr4.1:9457038-9457057 | MS.gene70315:intron | 45.0% | |
| CGCCGAGTTCTACAATTTGA+AGG | + | chr4.1:9455560-9455579 | MS.gene70315:intron | 45.0% | |
| CTTCTTTGGCACCAACTCAT+GGG | + | chr4.1:9456956-9456975 | MS.gene70315:CDS | 45.0% | |
| CTTGGCATGTCAGCTACTTA+CGG | + | chr4.1:9456609-9456628 | MS.gene70315:intron | 45.0% | |
| GAACATTTGAACTCACGACC+CGG | - | chr4.1:9453587-9453606 | None:intergenic | 45.0% | |
| TCTTCTTTGGCACCAACTCA+TGG | + | chr4.1:9456955-9456974 | MS.gene70315:CDS | 45.0% | |
| TGCAGACAGACTTAGATAGG+AGG | + | chr4.1:9456645-9456664 | MS.gene70315:intron | 45.0% | |
| TGCCGAGTCTATTCATGGTT+GGG | + | chr4.1:9457758-9457777 | MS.gene70315:CDS | 45.0% | |
| TGGGGATATGCTCCTTTATG+TGG | + | chr4.1:9454516-9454535 | MS.gene70315:intron | 45.0% | |
| TTTGGGGATTGGGATCAGAA+GGG | + | chr4.1:9453856-9453875 | MS.gene70315:CDS | 45.0% | |
| ! | CTAGCCTGCCACTTAGTTAA+AGG | + | chr4.1:9456855-9456874 | MS.gene70315:intron | 45.0% |
| ! | CTGTTGGTCATGTGTCATTG+GGG | + | chr4.1:9454498-9454517 | MS.gene70315:intron | 45.0% |
| ! | GAAAGGAGTGTATGGTTGGT+TGG | - | chr4.1:9452595-9452614 | None:intergenic | 45.0% |
| ! | GAGTGTGTTTGATGATAGCG+AGG | - | chr4.1:9454048-9454067 | None:intergenic | 45.0% |
| ! | GTGTGTTTGATGATAGCGAG+GGG | - | chr4.1:9454046-9454065 | None:intergenic | 45.0% |
| !! | AATTAAATAACAAAAAAATT+TGG | - | chr4.1:9452482-9452501 | None:intergenic | 5.0% |
| !!! | TATTCTTTTTTTTTTTTTTT+TGG | + | chr4.1:9453715-9453734 | MS.gene70315:intron | 5.0% |
| AGCCACACCTCCTTGAATTG+TGG | - | chr4.1:9452780-9452799 | None:intergenic | 50.0% | |
| CACAGCAGTTGAAGTAGCTG+AGG | - | chr4.1:9454752-9454771 | None:intergenic | 50.0% | |
| CAGTACCACAGTTTGGGGAT+TGG | + | chr4.1:9453845-9453864 | MS.gene70315:CDS | 50.0% | |
| CCCCCTTCTTGATCCTAACA+CGG | + | chr4.1:9455823-9455842 | MS.gene70315:intron | 50.0% | |
| CCGTGTTAGGATCAAGAAGG+GGG | - | chr4.1:9455826-9455845 | None:intergenic | 50.0% | |
| CTGCTTTGCACACAGTCTGT+TGG | - | chr4.1:9457489-9457508 | None:intergenic | 50.0% | |
| GACTGTGTGCAAAGCAGTAG+AGG | + | chr4.1:9457492-9457511 | MS.gene70315:intron | 50.0% | |
| GAGCCGTGTTAGGATCAAGA+AGG | - | chr4.1:9455829-9455848 | None:intergenic | 50.0% | |
| GCCAATGCCGAGTCTATTCA+TGG | + | chr4.1:9457753-9457772 | MS.gene70315:CDS | 50.0% | |
| GCCGTGTTAGGATCAAGAAG+GGG | - | chr4.1:9455827-9455846 | None:intergenic | 50.0% | |
| GGGGAGTTATGCTTGTCCTT+TGG | + | chr4.1:9454837-9454856 | MS.gene70315:intron | 50.0% | |
| GTTTGGGGATTGGGATCAGA+AGG | + | chr4.1:9453855-9453874 | MS.gene70315:CDS | 50.0% | |
| TGATCCCAATCCCCAAACTG+TGG | - | chr4.1:9453853-9453872 | None:intergenic | 50.0% | |
| TGCCACAATTCAAGGAGGTG+TGG | + | chr4.1:9452775-9452794 | MS.gene70315:intron | 50.0% | |
| TTAGTGGGACCCAGATTCAC+TGG | + | chr4.1:9454324-9454343 | MS.gene70315:intron | 50.0% | |
| TTGGGGATTGGGATCAGAAG+GGG | + | chr4.1:9453857-9453876 | MS.gene70315:CDS | 50.0% | |
| !! | CGATGATAACGGTGTTGCAG+TGG | + | chr4.1:9452560-9452579 | MS.gene70315:intron | 50.0% |
| !! | GCTGGAAGATCTTTGAAGCC+TGG | + | chr4.1:9457705-9457724 | MS.gene70315:CDS | 50.0% |
| ACTGAGAGGAAACAGGACCG+AGG | - | chr4.1:9457136-9457155 | None:intergenic | 55.0% | |
| CAAGCTGCAACAGCAGAACC+AGG | - | chr4.1:9457726-9457745 | None:intergenic | 55.0% | |
| GCACCAACTCATGGGAGAAC+GGG | + | chr4.1:9456964-9456983 | MS.gene70315:CDS | 55.0% | |
| GCTGACAGTGTTAGCACTGC+TGG | - | chr4.1:9454001-9454020 | None:intergenic | 55.0% | |
| GGCACCAACTCATGGGAGAA+CGG | + | chr4.1:9456963-9456982 | MS.gene70315:CDS | 55.0% | |
| GGTTGGGAACTCGGTAAGCA+AGG | + | chr4.1:9457774-9457793 | MS.gene70315:intron | 55.0% | |
| ! | AGCGAGGGGTGTGTTGTTGT+TGG | - | chr4.1:9454032-9454051 | None:intergenic | 55.0% |
| !! | CTGGTTCTGCTGTTGCAGCT+TGG | + | chr4.1:9457724-9457743 | MS.gene70315:CDS | 55.0% |
| GCGTCACTAGCACCAACACC+AGG | - | chr4.1:9452438-9452457 | None:intergenic | 60.0% | |
| GGACCCGTTCTCCCATGAGT+TGG | - | chr4.1:9456970-9456989 | None:intergenic | 60.0% | |
| !! | GCTGGAGGTGCTCACCATAG+TGG | + | chr4.1:9456450-9456469 | MS.gene70315:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 9452058 | 9457883 | 9452058 | ID=MS.gene70315 |
| chr4.1 | mRNA | 9452058 | 9457883 | 9452058 | ID=MS.gene70315.t1;Parent=MS.gene70315 |
| chr4.1 | exon | 9452058 | 9452075 | 9452058 | ID=MS.gene70315.t1.exon1;Parent=MS.gene70315.t1 |
| chr4.1 | CDS | 9452058 | 9452075 | 9452058 | ID=cds.MS.gene70315.t1;Parent=MS.gene70315.t1 |
| chr4.1 | exon | 9453826 | 9454074 | 9453826 | ID=MS.gene70315.t1.exon2;Parent=MS.gene70315.t1 |
| chr4.1 | CDS | 9453826 | 9454074 | 9453826 | ID=cds.MS.gene70315.t1;Parent=MS.gene70315.t1 |
| chr4.1 | exon | 9456952 | 9457055 | 9456952 | ID=MS.gene70315.t1.exon3;Parent=MS.gene70315.t1 |
| chr4.1 | CDS | 9456952 | 9457055 | 9456952 | ID=cds.MS.gene70315.t1;Parent=MS.gene70315.t1 |
| chr4.1 | exon | 9457674 | 9457786 | 9457674 | ID=MS.gene70315.t1.exon4;Parent=MS.gene70315.t1 |
| chr4.1 | CDS | 9457674 | 9457786 | 9457674 | ID=cds.MS.gene70315.t1;Parent=MS.gene70315.t1 |
| chr4.1 | exon | 9457867 | 9457883 | 9457867 | ID=MS.gene70315.t1.exon5;Parent=MS.gene70315.t1 |
| chr4.1 | CDS | 9457867 | 9457883 | 9457867 | ID=cds.MS.gene70315.t1;Parent=MS.gene70315.t1 |
| Gene Sequence |
| Protein sequence |
