Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70561.t1 | XP_003601304.1 | 99 | 289 | 3 | 0 | 1 | 289 | 1 | 289 | 5.00E-150 | 540.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70561.t1 | F4IK01 | 74.5 | 282 | 71 | 1 | 5 | 285 | 13 | 294 | 2.8e-109 | 396.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70561.t1 | G7J611 | 99.0 | 289 | 3 | 0 | 1 | 289 | 1 | 289 | 3.6e-150 | 540.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050071 | MS.gene70561 | 0.81091 | 9.11E-51 | -1.69E-46 |
| MS.gene052275 | MS.gene70561 | 0.847976 | 8.22E-60 | -1.69E-46 |
| MS.gene055331 | MS.gene70561 | 0.805837 | 1.10E-49 | -1.69E-46 |
| MS.gene055616 | MS.gene70561 | 0.811668 | 6.24E-51 | -1.69E-46 |
| MS.gene056266 | MS.gene70561 | -0.841321 | 5.10E-58 | -1.69E-46 |
| MS.gene061044 | MS.gene70561 | 0.818665 | 1.74E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene70561 | MS.gene044021 | PPI |
| MS.gene70561 | MS.gene35150 | PPI |
| MS.gene70561 | MS.gene67108 | PPI |
| MS.gene70561 | MS.gene028307 | PPI |
| MS.gene24383 | MS.gene70561 | PPI |
| MS.gene023147 | MS.gene70561 | PPI |
| MS.gene062778 | MS.gene70561 | PPI |
| MS.gene70561 | MS.gene36485 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70561.t1 | MTR_3g079220 | 98.962 | 289 | 3 | 0 | 1 | 289 | 1 | 289 | 0.0 | 584 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70561.t1 | AT2G41350 | 74.733 | 281 | 71 | 0 | 5 | 285 | 13 | 293 | 7.72e-154 | 432 |
| MS.gene70561.t1 | AT2G41350 | 74.468 | 282 | 71 | 1 | 5 | 285 | 13 | 294 | 4.76e-152 | 427 |
| MS.gene70561.t1 | AT2G21980 | 79.310 | 58 | 12 | 0 | 228 | 285 | 1 | 58 | 1.14e-24 | 94.4 |
Find 73 sgRNAs with CRISPR-Local
Find 306 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCTGCAACTTCGAAGGTTT+TGG | 0.267923 | 3.1:+64691893 | None:intergenic |
| GAGACGAGCGGCTTCGTCTT+TGG | 0.285848 | 3.1:+64691797 | None:intergenic |
| TCAGTCTCCACAGAAGTTTC+TGG | 0.296590 | 3.1:-64691942 | MS.gene70561:CDS |
| TGCAAGGATTAGAGAGATTC+TGG | 0.305262 | 3.1:-64691639 | MS.gene70561:CDS |
| AGAGATTAGCCATAGGGTTT+TGG | 0.308633 | 3.1:-64688509 | MS.gene70561:CDS |
| TCCAAAACCTTCGAAGTTGC+AGG | 0.358974 | 3.1:-64691894 | MS.gene70561:CDS |
| GCGTGGTGTGTATTCGAATT+CGG | 0.370925 | 3.1:+64691860 | None:intergenic |
| ATCTATATTCTGCGGCTTTG+AGG | 0.378929 | 3.1:+64691757 | None:intergenic |
| GAGCTACTTCATCTTCCAAT+TGG | 0.383390 | 3.1:+64690946 | None:intergenic |
| TTTAGCTTTCTTGTGGCAAT+GGG | 0.405983 | 3.1:-64691431 | MS.gene70561:intron |
| CGTGGTGTGTATTCGAATTC+GGG | 0.408134 | 3.1:+64691861 | None:intergenic |
| CGAGGTTAACATATTTGAAA+AGG | 0.410169 | 3.1:-64691313 | MS.gene70561:intron |
| AAAACCCTATGGCTAATCTC+TGG | 0.417355 | 3.1:+64688511 | None:intergenic |
| TCTTCTCGATTATACTAGAA+AGG | 0.427173 | 3.1:-64691342 | MS.gene70561:CDS |
| GTGCAGAACACTAGCCCAAT+TGG | 0.431088 | 3.1:-64690961 | MS.gene70561:intron |
| GTGTATTCGAATTCGGGAAC+GGG | 0.431311 | 3.1:+64691867 | None:intergenic |
| GATTCTGGAGAATGTAGGTT+TGG | 0.441568 | 3.1:-64691624 | MS.gene70561:CDS |
| AGAGAGATTCTGGAGAATGT+AGG | 0.442677 | 3.1:-64691629 | MS.gene70561:CDS |
| GAAATACCGGAGGCAAATCT+TGG | 0.443503 | 3.1:+64688416 | None:intergenic |
| CAATGTGGTTGCGTCGGCGC+AGG | 0.443838 | 3.1:-64691582 | MS.gene70561:CDS |
| AGACCGGTGTGGAGGAGAAA+AGG | 0.446370 | 3.1:-64691391 | MS.gene70561:CDS |
| GGTAACTTCTTAGAGTATCA+AGG | 0.454855 | 3.1:+64688437 | None:intergenic |
| AGCTACTTCATCTTCCAATT+GGG | 0.469118 | 3.1:+64690947 | None:intergenic |
| GAAAAGGGCTAAAGTGCATA+AGG | 0.474248 | 3.1:-64691375 | MS.gene70561:CDS |
| TGTGTATTCGAATTCGGGAA+CGG | 0.481161 | 3.1:+64691866 | None:intergenic |
| TAAGAGATACTGAACTTAGT+AGG | 0.497045 | 3.1:-64691529 | MS.gene70561:intron |
| AAACCCTATGGCTAATCTCT+GGG | 0.498715 | 3.1:+64688512 | None:intergenic |
| AAATAAACTAACCTCATAGT+TGG | 0.499847 | 3.1:+64690842 | None:intergenic |
| GGAGAATGTAGGTTTGGCTC+AGG | 0.504384 | 3.1:-64691618 | MS.gene70561:CDS |
| GATTATCCAGGATAAAGCTC+TGG | 0.506748 | 3.1:-64688307 | MS.gene70561:intron |
| ACCGTCCAATGTGGTTGCGT+CGG | 0.519517 | 3.1:-64691588 | MS.gene70561:CDS |
| GGCTGAGCATAGGAAGGAGC+TGG | 0.522874 | 3.1:-64688479 | MS.gene70561:CDS |
| GACCGGTGTGGAGGAGAAAA+GGG | 0.529132 | 3.1:-64691390 | MS.gene70561:CDS |
| CTGCGCCGACGCAACCACAT+TGG | 0.532875 | 3.1:+64691583 | None:intergenic |
| GCAAGCAGCTCTTCTAAATG+AGG | 0.535611 | 3.1:-64688217 | MS.gene70561:CDS |
| AGCTCCGTGTGAGGCTCAGA+TGG | 0.536186 | 3.1:-64690928 | MS.gene70561:CDS |
| GATATTTCATTGAGGAAGAC+CGG | 0.541804 | 3.1:-64691407 | MS.gene70561:CDS |
| GCAACAATGTGCCAACTATG+AGG | 0.550825 | 3.1:-64690853 | MS.gene70561:intron |
| CTTCTTAGAGTATCAAGGAT+GGG | 0.552403 | 3.1:+64688442 | None:intergenic |
| TACCCCAGAGATTAGCCATA+GGG | 0.553381 | 3.1:-64688515 | MS.gene70561:CDS |
| GGGTTTACCTGCAACTTCGA+AGG | 0.554455 | 3.1:+64691887 | None:intergenic |
| GTGAGGCTCAGATGGAAAGT+TGG | 0.555194 | 3.1:-64690920 | MS.gene70561:CDS |
| CAAGCAGCTCTTCTAAATGA+GGG | 0.558176 | 3.1:-64688216 | MS.gene70561:CDS |
| AGCATAGGAAGGAGCTGGAG+AGG | 0.563485 | 3.1:-64688474 | MS.gene70561:CDS |
| GAATCAGCGAAGTAAAAGAA+TGG | 0.564127 | 3.1:-64691920 | MS.gene70561:CDS |
| CCATGTCAACCAAAACCCTA+TGG | 0.565389 | 3.1:+64688500 | None:intergenic |
| ACCTTGGGATCTATATTCTG+CGG | 0.568417 | 3.1:+64691749 | None:intergenic |
| TGGTTGACATGGCTGAGCAT+AGG | 0.579448 | 3.1:-64688489 | MS.gene70561:CDS |
| GCAGACGAGGCTCAACCGTG+TGG | 0.588667 | 3.1:-64688542 | MS.gene70561:intron |
| AAGTTACCAAGATTTGCCTC+CGG | 0.589613 | 3.1:-64688422 | MS.gene70561:intron |
| GCCGCAGAATATAGATCCCA+AGG | 0.591800 | 3.1:-64691750 | MS.gene70561:intron |
| CTTTCCATCTGAGCCTCACA+CGG | 0.596528 | 3.1:+64690924 | None:intergenic |
| ACTTCTTAGAGTATCAAGGA+TGG | 0.600198 | 3.1:+64688441 | None:intergenic |
| GCCGACGCAACCACATTGGA+CGG | 0.603040 | 3.1:+64691587 | None:intergenic |
| GGAGACTGATGCTTCTTGAT+CGG | 0.607951 | 3.1:+64691956 | None:intergenic |
| ATTGAGGAAGACCGGTGTGG+AGG | 0.608171 | 3.1:-64691399 | MS.gene70561:CDS |
| ATACCCCAGAGATTAGCCAT+AGG | 0.609024 | 3.1:-64688516 | MS.gene70561:CDS |
| CTTTAGAGAGAGTAACGAGA+TGG | 0.609598 | 3.1:+64691820 | None:intergenic |
| GCTGATTCCAGAAACTTCTG+TGG | 0.613746 | 3.1:+64691935 | None:intergenic |
| TGACATGGCTGAGCATAGGA+AGG | 0.617304 | 3.1:-64688485 | MS.gene70561:CDS |
| CAATGGGTGATATTTCATTG+AGG | 0.630300 | 3.1:-64691415 | MS.gene70561:CDS |
| TTCAAGACGCTTCTCAGCAG+CGG | 0.631015 | 3.1:+64688248 | None:intergenic |
| CAGACGAGGCTCAACCGTGT+GGG | 0.631934 | 3.1:-64688541 | MS.gene70561:CDS |
| ATCACGAGCGACGAGACGAG+CGG | 0.645010 | 3.1:+64691785 | None:intergenic |
| GAGCAATTACTTGAATGTGA+TGG | 0.645492 | 3.1:-64690898 | MS.gene70561:CDS |
| TTCATTGAGGAAGACCGGTG+TGG | 0.650963 | 3.1:-64691402 | MS.gene70561:CDS |
| AACCCTATGGCTAATCTCTG+GGG | 0.660250 | 3.1:+64688513 | None:intergenic |
| ATACTAGAAAGGCTATTGCG+AGG | 0.667502 | 3.1:-64691331 | MS.gene70561:CDS |
| GGAGAGTTTACCGTCCAATG+TGG | 0.679839 | 3.1:-64691597 | MS.gene70561:CDS |
| AAGCAGCTCTTCTAAATGAG+GGG | 0.682093 | 3.1:-64688215 | MS.gene70561:CDS |
| AGATGAAGTAGCTCCGTGTG+AGG | 0.688922 | 3.1:-64690937 | MS.gene70561:CDS |
| TCTCTGGGGTATAGCCCACA+CGG | 0.692148 | 3.1:+64688527 | None:intergenic |
| TGCAAGTGAGAGACACTGCG+TGG | 0.791418 | 3.1:+64691843 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATGGAAATATTAATTATTTT+AGG | - | chr3.1:64691089-64691108 | MS.gene70561:intron | 10.0% |
| !!! | TATTACTTTTTTATGAAATA+AGG | - | chr3.1:64690499-64690518 | MS.gene70561:intron | 10.0% |
| !!! | TGGAAATATTAATTATTTTA+GGG | - | chr3.1:64691090-64691109 | MS.gene70561:intron | 10.0% |
| !! | GTATATAAATAGGATAAATT+TGG | - | chr3.1:64690004-64690023 | MS.gene70561:intron | 15.0% |
| !! | TATTATTAATGAAATTCTCT+GGG | - | chr3.1:64690122-64690141 | MS.gene70561:intron | 15.0% |
| !!! | AAATGATGATAGTATTTTTT+AGG | - | chr3.1:64690376-64690395 | MS.gene70561:intron | 15.0% |
| !!! | AATGAATTTTATCACAAAAT+TGG | - | chr3.1:64690925-64690944 | MS.gene70561:CDS | 15.0% |
| !!! | ATGAATTTTATCACAAAATT+GGG | - | chr3.1:64690926-64690945 | MS.gene70561:CDS | 15.0% |
| !!! | GCATTGTTATTTTTATATAT+TGG | - | chr3.1:64691574-64691593 | MS.gene70561:CDS | 15.0% |
| !!! | TTTTGTGATAAAATTCATTT+TGG | + | chr3.1:64690924-64690943 | None:intergenic | 15.0% |
| !!! | TTTTGTTATTTCAATATTCT+AGG | + | chr3.1:64689560-64689579 | None:intergenic | 15.0% |
| !! | AAGAATATCATAACATAGAT+TGG | + | chr3.1:64691309-64691328 | None:intergenic | 20.0% |
| !! | AAGATCATCAAACATAAAAA+AGG | - | chr3.1:64690694-64690713 | MS.gene70561:intron | 20.0% |
| !! | AGAATATCATAACATAGATT+GGG | + | chr3.1:64691308-64691327 | None:intergenic | 20.0% |
| !! | AGATCATCAAACATAAAAAA+GGG | - | chr3.1:64690695-64690714 | MS.gene70561:intron | 20.0% |
| !! | ATAAATAGGATAAATTTGGA+TGG | - | chr3.1:64690008-64690027 | MS.gene70561:intron | 20.0% |
| !! | ATTTAGAAAATTTGTGTAGA+AGG | - | chr3.1:64690055-64690074 | MS.gene70561:intron | 20.0% |
| !! | GAGAATTTCATTAATAATAC+TGG | + | chr3.1:64690121-64690140 | None:intergenic | 20.0% |
| !! | GTAAAAATGTAAAATGAATG+TGG | - | chr3.1:64689059-64689078 | MS.gene70561:intron | 20.0% |
| !! | GTATTATTAATGAAATTCTC+TGG | - | chr3.1:64690121-64690140 | MS.gene70561:intron | 20.0% |
| !! | TAGCAATTGAAGATAAAAAA+AGG | - | chr3.1:64691894-64691913 | MS.gene70561:CDS | 20.0% |
| !! | TCTTAATTGAAAACAATTCT+GGG | + | chr3.1:64689947-64689966 | None:intergenic | 20.0% |
| !! | TGAATTTGATGTTAGATAAA+AGG | - | chr3.1:64689433-64689452 | MS.gene70561:intron | 20.0% |
| !! | TTAACATATTTGAAAAGGTA+TGG | - | chr3.1:64688864-64688883 | MS.gene70561:intron | 20.0% |
| !! | TTCTTAATTGAAAACAATTC+TGG | + | chr3.1:64689948-64689967 | None:intergenic | 20.0% |
| !!! | AAAGTTTGAATTTTGGAATT+GGG | - | chr3.1:64688713-64688732 | MS.gene70561:intron | 20.0% |
| !!! | AATTTAATTTGTCCAATCAA+AGG | + | chr3.1:64691017-64691036 | None:intergenic | 20.0% |
| !!! | ACTTGAATTTGACAATTTTA+AGG | + | chr3.1:64690608-64690627 | None:intergenic | 20.0% |
| !!! | ATTTTAGCTGTAATTTTTGT+CGG | - | chr3.1:64689730-64689749 | MS.gene70561:intron | 20.0% |
| !!! | GATTAATACTTGTTAATGTT+CGG | - | chr3.1:64690639-64690658 | MS.gene70561:intron | 20.0% |
| !!! | TAAAGTTTGAATTTTGGAAT+TGG | - | chr3.1:64688712-64688731 | MS.gene70561:intron | 20.0% |
| !!! | TGAATTTTATCACAAAATTG+GGG | - | chr3.1:64690927-64690946 | MS.gene70561:CDS | 20.0% |
| !!! | TGGTTTTGAACTAAAAATTT+AGG | - | chr3.1:64688884-64688903 | MS.gene70561:intron | 20.0% |
| !!! | TTTTTTATCTTCAATTGCTA+AGG | + | chr3.1:64691894-64691913 | None:intergenic | 20.0% |
| ! | AAATAAACTAACCTCATAGT+TGG | + | chr3.1:64689333-64689352 | None:intergenic | 25.0% |
| ! | AATCAAGAAAGAATGAGATT+TGG | - | chr3.1:64690406-64690425 | MS.gene70561:intron | 25.0% |
| ! | ACGGATAACATATTATAAAC+TGG | - | chr3.1:64691525-64691544 | MS.gene70561:intron | 25.0% |
| ! | AGCTGTAAAAATTAATACTG+TGG | - | chr3.1:64688958-64688977 | MS.gene70561:intron | 25.0% |
| ! | ATAATAGATTGTAACACATG+TGG | + | chr3.1:64690482-64690501 | None:intergenic | 25.0% |
| ! | ATCAAGAAAGAATGAGATTT+GGG | - | chr3.1:64690407-64690426 | MS.gene70561:intron | 25.0% |
| ! | ATCATCAAACATAAAAAAGG+GGG | - | chr3.1:64690697-64690716 | MS.gene70561:intron | 25.0% |
| ! | ATGCAATAAAACCAGTTTAA+TGG | + | chr3.1:64689534-64689553 | None:intergenic | 25.0% |
| ! | CAAGAGATATAGTTAGAAAA+AGG | - | chr3.1:64689477-64689496 | MS.gene70561:intron | 25.0% |
| ! | GATCATCAAACATAAAAAAG+GGG | - | chr3.1:64690696-64690715 | MS.gene70561:intron | 25.0% |
| ! | GCATGAAAAATATGAAATAC+CGG | + | chr3.1:64691772-64691791 | None:intergenic | 25.0% |
| ! | TAATAGATTGTAACACATGT+GGG | + | chr3.1:64690481-64690500 | None:intergenic | 25.0% |
| ! | TAGTCAAATTAAAACTGTCT+AGG | + | chr3.1:64689098-64689117 | None:intergenic | 25.0% |
| ! | TCAGTGTCTATCTTATAAAT+GGG | + | chr3.1:64690257-64690276 | None:intergenic | 25.0% |
| ! | TGCAATAAAACCAGTTTAAT+GGG | + | chr3.1:64689533-64689552 | None:intergenic | 25.0% |
| !! | CTGTGTTAAAGTTTGAATTT+TGG | - | chr3.1:64688706-64688725 | MS.gene70561:intron | 25.0% |
| !! | TTTATGTTTGATGATCTTGA+TGG | + | chr3.1:64690692-64690711 | None:intergenic | 25.0% |
| !!! | AGGTTAGTTTATTTGTTTTG+AGG | - | chr3.1:64689339-64689358 | MS.gene70561:intron | 25.0% |
| !!! | CTTTCTATTTGTTTTAGTTC+TGG | - | chr3.1:64691791-64691810 | MS.gene70561:CDS | 25.0% |
| !!! | GGTTAGTTTATTTGTTTTGA+GGG | - | chr3.1:64689340-64689359 | MS.gene70561:intron | 25.0% |
| !!! | GTGATAAAATTCATTTTGGT+AGG | + | chr3.1:64690920-64690939 | None:intergenic | 25.0% |
| !!! | GTTAGTTTATTTGTTTTGAG+GGG | - | chr3.1:64689341-64689360 | MS.gene70561:intron | 25.0% |
| !!! | TAATTATTTTAGGGTCTGTT+CGG | - | chr3.1:64691099-64691118 | MS.gene70561:intron | 25.0% |
| !!! | TTAAGAGAGTCAGTTTTTTT+TGG | + | chr3.1:64691417-64691436 | None:intergenic | 25.0% |
| !!! | TTAGTTTATTTGTTTTGAGG+GGG | - | chr3.1:64689342-64689361 | MS.gene70561:intron | 25.0% |
| !!! | TTTAGCATTGATACATAACT+TGG | - | chr3.1:64688919-64688938 | MS.gene70561:intron | 25.0% |
| AAACTACAATAATGTGCTCA+AGG | - | chr3.1:64689122-64689141 | MS.gene70561:intron | 30.0% | |
| AAAGAATGAGATTTGGGAAT+TGG | - | chr3.1:64690413-64690432 | MS.gene70561:intron | 30.0% | |
| AACTACAATAATGTGCTCAA+GGG | - | chr3.1:64689123-64689142 | MS.gene70561:intron | 30.0% | |
| AAGGAGTAAATTTGATTCTG+AGG | - | chr3.1:64690547-64690566 | MS.gene70561:intron | 30.0% | |
| AATAAGGAAATGTTGTTCAG+TGG | - | chr3.1:64690515-64690534 | MS.gene70561:intron | 30.0% | |
| AATAGATTGTAACACATGTG+GGG | + | chr3.1:64690480-64690499 | None:intergenic | 30.0% | |
| AGAACACATAGAATTGAAGT+GGG | - | chr3.1:64690166-64690185 | MS.gene70561:intron | 30.0% | |
| AGAAGGATGTTAAGTAAATC+AGG | - | chr3.1:64690072-64690091 | MS.gene70561:intron | 30.0% | |
| AGATTTGGGAATTGGAAATT+GGG | - | chr3.1:64690421-64690440 | MS.gene70561:intron | 30.0% | |
| AGGAGTAAATTTGATTCTGA+GGG | - | chr3.1:64690548-64690567 | MS.gene70561:intron | 30.0% | |
| AGTTAGAAAAAGGACAGAAA+AGG | - | chr3.1:64689487-64689506 | MS.gene70561:intron | 30.0% | |
| ATAAGGAAATGTTGTTCAGT+GGG | - | chr3.1:64690516-64690535 | MS.gene70561:intron | 30.0% | |
| ATGTTAGATAAAAGGCTGTA+GGG | - | chr3.1:64689441-64689460 | MS.gene70561:intron | 30.0% | |
| ATGTTCGGTATAAAATTCTC+AGG | - | chr3.1:64690654-64690673 | MS.gene70561:intron | 30.0% | |
| ATTATCACCAATTAGGGTTA+GGG | - | chr3.1:64688461-64688480 | MS.gene70561:CDS | 30.0% | |
| CAAAGACTAAGAGTCAATTT+GGG | + | chr3.1:64691505-64691524 | None:intergenic | 30.0% | |
| CGAGGTTAACATATTTGAAA+AGG | - | chr3.1:64688859-64688878 | MS.gene70561:intron | 30.0% | |
| CTTGAACAAGAGAAACAAAA+AGG | - | chr3.1:64689584-64689603 | MS.gene70561:intron | 30.0% | |
| GGGTAAAAGATCATAAAGTT+TGG | - | chr3.1:64690441-64690460 | MS.gene70561:intron | 30.0% | |
| GTCAGTGTCTATCTTATAAA+TGG | + | chr3.1:64690258-64690277 | None:intergenic | 30.0% | |
| TAAGAGATACTGAACTTAGT+AGG | - | chr3.1:64688643-64688662 | MS.gene70561:intron | 30.0% | |
| TACTATCATCATTTCGTCAA+TGG | + | chr3.1:64690370-64690389 | None:intergenic | 30.0% | |
| TAGAACACATAGAATTGAAG+TGG | - | chr3.1:64690165-64690184 | MS.gene70561:intron | 30.0% | |
| TATCATTCTCTACAAATGAC+AGG | - | chr3.1:64691366-64691385 | MS.gene70561:CDS | 30.0% | |
| TCAAAGACTAAGAGTCAATT+TGG | + | chr3.1:64691506-64691525 | None:intergenic | 30.0% | |
| TCATCAAACATAAAAAAGGG+GGG | - | chr3.1:64690698-64690717 | MS.gene70561:intron | 30.0% | |
| TCTTCTCGATTATACTAGAA+AGG | - | chr3.1:64688830-64688849 | MS.gene70561:intron | 30.0% | |
| TGAAAAATATGAAATACCGG+AGG | + | chr3.1:64691769-64691788 | None:intergenic | 30.0% | |
| TGGAAGAAATTGAAGAATCT+GGG | - | chr3.1:64691168-64691187 | MS.gene70561:intron | 30.0% | |
| TGTAAAATGAATGTGGAACT+TGG | - | chr3.1:64689066-64689085 | MS.gene70561:intron | 30.0% | |
| TTGTTAGGGTAAAGAAATGA+GGG | - | chr3.1:64689896-64689915 | MS.gene70561:intron | 30.0% | |
| TTTCGTATAGCAATTCAGTT+TGG | + | chr3.1:64689768-64689787 | None:intergenic | 30.0% | |
| ! | AATTGACTCTTAGTCTTTGA+CGG | - | chr3.1:64691506-64691525 | MS.gene70561:intron | 30.0% |
| ! | GAGCACATTATTGTAGTTTT+TGG | + | chr3.1:64689121-64689140 | None:intergenic | 30.0% |
| ! | TAACCCTAATTGGTGATAAT+GGG | + | chr3.1:64688461-64688480 | None:intergenic | 30.0% |
| !! | ATAATACTGGCTCTATTCAA+TGG | + | chr3.1:64690108-64690127 | None:intergenic | 30.0% |
| !! | GATCTTGATGGATTAAAGAT+AGG | + | chr3.1:64690680-64690699 | None:intergenic | 30.0% |
| !!! | AATTATTTTAGGGTCTGTTC+GGG | - | chr3.1:64691100-64691119 | MS.gene70561:intron | 30.0% |
| !!! | GGTTTTTTTTAGCTTTCTTG+TGG | - | chr3.1:64688734-64688753 | MS.gene70561:intron | 30.0% |
| !!! | TAGTTTATTTGTTTTGAGGG+GGG | - | chr3.1:64689343-64689362 | MS.gene70561:intron | 30.0% |
| AAAAAGGACAGAAAAGGAAG+CGG | - | chr3.1:64689493-64689512 | MS.gene70561:intron | 35.0% | |
| AACCACAGTATAGAATCTCA+TGG | - | chr3.1:64691070-64691089 | MS.gene70561:intron | 35.0% | |
| AACCTACATTTGCTCAAGAT+TGG | - | chr3.1:64690580-64690599 | MS.gene70561:intron | 35.0% | |
| AATTTGTCCAATCAAAGGTG+AGG | + | chr3.1:64691012-64691031 | None:intergenic | 35.0% | |
| ACTACAATAATGTGCTCAAG+GGG | - | chr3.1:64689124-64689143 | MS.gene70561:intron | 35.0% | |
| ACTCCCATTATCACCAATTA+GGG | - | chr3.1:64688455-64688474 | MS.gene70561:CDS | 35.0% | |
| AGAGAAGCTAAGTAGTTAGA+GGG | - | chr3.1:64689973-64689992 | MS.gene70561:intron | 35.0% | |
| AGATACTGAACTTAGTAGGT+GGG | - | chr3.1:64688647-64688666 | MS.gene70561:intron | 35.0% | |
| AGATTATTCAGAATCTCAGC+AGG | - | chr3.1:64691046-64691065 | MS.gene70561:intron | 35.0% | |
| AGCTACTTCATCTTCCAATT+GGG | + | chr3.1:64689228-64689247 | None:intergenic | 35.0% | |
| AGTCAATTTGGGAGATTGAA+GGG | + | chr3.1:64691494-64691513 | None:intergenic | 35.0% | |
| CAATGGGTGATATTTCATTG+AGG | - | chr3.1:64688757-64688776 | MS.gene70561:intron | 35.0% | |
| CATCAAACATAAAAAAGGGG+GGG | - | chr3.1:64690699-64690718 | MS.gene70561:intron | 35.0% | |
| CATTATCACCAATTAGGGTT+AGG | - | chr3.1:64688460-64688479 | MS.gene70561:CDS | 35.0% | |
| CGATTCATACTAAACTAGTG+AGG | + | chr3.1:64689185-64689204 | None:intergenic | 35.0% | |
| GAAAACAATTCTGGGTAAAC+TGG | + | chr3.1:64689939-64689958 | None:intergenic | 35.0% | |
| GAACTCAAAAAATGTACTGG+AGG | - | chr3.1:64691249-64691268 | MS.gene70561:intron | 35.0% | |
| GAATCAGCGAAGTAAAAGAA+TGG | - | chr3.1:64688252-64688271 | MS.gene70561:CDS | 35.0% | |
| GAGATTTGGGAATTGGAAAT+TGG | - | chr3.1:64690420-64690439 | MS.gene70561:intron | 35.0% | |
| GAGCAATTACTTGAATGTGA+TGG | - | chr3.1:64689274-64689293 | MS.gene70561:intron | 35.0% | |
| GATATTTCATTGAGGAAGAC+CGG | - | chr3.1:64688765-64688784 | MS.gene70561:intron | 35.0% | |
| GATGTTAGATAAAAGGCTGT+AGG | - | chr3.1:64689440-64689459 | MS.gene70561:intron | 35.0% | |
| GGAGGGTCATGTATATAAAT+AGG | - | chr3.1:64689994-64690013 | MS.gene70561:intron | 35.0% | |
| GGATAAATTTGGATGGAAGA+AGG | - | chr3.1:64690015-64690034 | MS.gene70561:intron | 35.0% | |
| GTCTATCTTATAAATGGGAG+AGG | + | chr3.1:64690252-64690271 | None:intergenic | 35.0% | |
| GTGGAAGAAATTGAAGAATC+TGG | - | chr3.1:64691167-64691186 | MS.gene70561:intron | 35.0% | |
| GTTGTTAGGGTAAAGAAATG+AGG | - | chr3.1:64689895-64689914 | MS.gene70561:intron | 35.0% | |
| TAAGGAAATGTTGTTCAGTG+GGG | - | chr3.1:64690517-64690536 | MS.gene70561:intron | 35.0% | |
| TAGAGAAGCTAAGTAGTTAG+AGG | - | chr3.1:64689972-64689991 | MS.gene70561:intron | 35.0% | |
| TATTTCGTAGCATGCAGATT+TGG | + | chr3.1:64690845-64690864 | None:intergenic | 35.0% | |
| TCAAAAAATGTACTGGAGGA+GGG | - | chr3.1:64691253-64691272 | MS.gene70561:intron | 35.0% | |
| TTATCCTGTACCCATTAAAC+TGG | - | chr3.1:64689520-64689539 | MS.gene70561:intron | 35.0% | |
| TTCCATGAGATTCTATACTG+TGG | + | chr3.1:64691075-64691094 | None:intergenic | 35.0% | |
| TTCTATGTGTTCTATCTCAG+CGG | + | chr3.1:64690159-64690178 | None:intergenic | 35.0% | |
| TTCTCTACAAATGACAGGTT+CGG | - | chr3.1:64691371-64691390 | MS.gene70561:CDS | 35.0% | |
| ! | AAAACCAGTTTAATGGGTAC+AGG | + | chr3.1:64689527-64689546 | None:intergenic | 35.0% |
| ! | ACTTCTTAGAGTATCAAGGA+TGG | + | chr3.1:64691734-64691753 | None:intergenic | 35.0% |
| ! | CTAACCCTAATTGGTGATAA+TGG | + | chr3.1:64688462-64688481 | None:intergenic | 35.0% |
| ! | CTGTAATTTTTGTCGGATGA+TGG | - | chr3.1:64689737-64689756 | MS.gene70561:intron | 35.0% |
| ! | CTTCTTAGAGTATCAAGGAT+GGG | + | chr3.1:64691733-64691752 | None:intergenic | 35.0% |
| ! | GGTAACTTCTTAGAGTATCA+AGG | + | chr3.1:64691738-64691757 | None:intergenic | 35.0% |
| !! | GGAGTAGGTGTTATTCAATT+TGG | - | chr3.1:64689364-64689383 | MS.gene70561:intron | 35.0% |
| !! | TTTAGCTTTCTTGTGGCAAT+GGG | - | chr3.1:64688741-64688760 | MS.gene70561:intron | 35.0% |
| !!! | AGAGAGTCAGTTTTTTTTGG+TGG | + | chr3.1:64691414-64691433 | None:intergenic | 35.0% |
| !!! | TTTTAGCTTTCTTGTGGCAA+TGG | - | chr3.1:64688740-64688759 | MS.gene70561:intron | 35.0% |
| AAAACCCTATGGCTAATCTC+TGG | + | chr3.1:64691664-64691683 | None:intergenic | 40.0% | |
| AAACCCTATGGCTAATCTCT+GGG | + | chr3.1:64691663-64691682 | None:intergenic | 40.0% | |
| AAATTGGGGAGTAAACATGC+AGG | - | chr3.1:64690941-64690960 | MS.gene70561:CDS | 40.0% | |
| AAGCAGCTCTTCTAAATGAG+GGG | - | chr3.1:64691957-64691976 | MS.gene70561:CDS | 40.0% | |
| AAGCTAAGTAGTTAGAGGGA+GGG | - | chr3.1:64689977-64689996 | MS.gene70561:intron | 40.0% | |
| AAGGAAATGTTGTTCAGTGG+GGG | - | chr3.1:64690518-64690537 | MS.gene70561:intron | 40.0% | |
| AAGTTACCAAGATTTGCCTC+CGG | - | chr3.1:64691750-64691769 | MS.gene70561:intron | 40.0% | |
| ACAAAAGCCCAGAAGTTTCT+TGG | - | chr3.1:64690299-64690318 | MS.gene70561:intron | 40.0% | |
| ACAATTCTGGGTAAACTGGT+TGG | + | chr3.1:64689935-64689954 | None:intergenic | 40.0% | |
| ACCAATTAGGGTTAGGGTTA+AGG | - | chr3.1:64688467-64688486 | MS.gene70561:CDS | 40.0% | |
| ACCTTAACCCTAACCCTAAT+TGG | + | chr3.1:64688471-64688490 | None:intergenic | 40.0% | |
| ACCTTGGGATCTATATTCTG+CGG | + | chr3.1:64688426-64688445 | None:intergenic | 40.0% | |
| ACTTGTATCATGCAAGACTG+TGG | - | chr3.1:64689671-64689690 | MS.gene70561:intron | 40.0% | |
| AGCCAATCTTGAGCAAATGT+AGG | + | chr3.1:64690585-64690604 | None:intergenic | 40.0% | |
| ATACTAGAAAGGCTATTGCG+AGG | - | chr3.1:64688841-64688860 | MS.gene70561:intron | 40.0% | |
| ATCTATATTCTGCGGCTTTG+AGG | + | chr3.1:64688418-64688437 | None:intergenic | 40.0% | |
| CAAAAGCCCAGAAGTTTCTT+GGG | - | chr3.1:64690300-64690319 | MS.gene70561:intron | 40.0% | |
| CAAGCAGCTCTTCTAAATGA+GGG | - | chr3.1:64691956-64691975 | MS.gene70561:CDS | 40.0% | |
| CACTCCCATTATCACCAATT+AGG | - | chr3.1:64688454-64688473 | MS.gene70561:CDS | 40.0% | |
| CTACAATAATGTGCTCAAGG+GGG | - | chr3.1:64689125-64689144 | MS.gene70561:intron | 40.0% | |
| CTCAAAAAATGTACTGGAGG+AGG | - | chr3.1:64691252-64691271 | MS.gene70561:intron | 40.0% | |
| CTTATAAATGGGAGAGGAAC+AGG | + | chr3.1:64690246-64690265 | None:intergenic | 40.0% | |
| GAAAAGGGCTAAAGTGCATA+AGG | - | chr3.1:64688797-64688816 | MS.gene70561:intron | 40.0% | |
| GAAATTGAAGAATCTGGGAG+AGG | - | chr3.1:64691173-64691192 | MS.gene70561:intron | 40.0% | |
| GAGAAAAAGGAAGGAGAAAG+TGG | - | chr3.1:64691148-64691167 | MS.gene70561:intron | 40.0% | |
| GAGATACTGAACTTAGTAGG+TGG | - | chr3.1:64688646-64688665 | MS.gene70561:intron | 40.0% | |
| GAGCTACTTCATCTTCCAAT+TGG | + | chr3.1:64689229-64689248 | None:intergenic | 40.0% | |
| GAGTCAATTTGGGAGATTGA+AGG | + | chr3.1:64691495-64691514 | None:intergenic | 40.0% | |
| GATTATCCAGGATAAAGCTC+TGG | - | chr3.1:64691865-64691884 | MS.gene70561:CDS | 40.0% | |
| GGGAGTGATTATCTTACCTT+GGG | + | chr3.1:64688441-64688460 | None:intergenic | 40.0% | |
| GGGGAACTCAAAAAATGTAC+TGG | - | chr3.1:64691246-64691265 | MS.gene70561:intron | 40.0% | |
| GTCAATTTGGGAGATTGAAG+GGG | + | chr3.1:64691493-64691512 | None:intergenic | 40.0% | |
| TCCTGGATAATCCAAACACA+CGG | + | chr3.1:64691857-64691876 | None:intergenic | 40.0% | |
| TCTCTACAAATGACAGGTTC+GGG | - | chr3.1:64691372-64691391 | MS.gene70561:CDS | 40.0% | |
| TGAATTGACGATTCCCTTCA+TGG | - | chr3.1:64689870-64689889 | MS.gene70561:intron | 40.0% | |
| TGATAACTCAAAACCCCCTA+CGG | - | chr3.1:64691221-64691240 | MS.gene70561:intron | 40.0% | |
| TGCAAGGATTAGAGAGATTC+TGG | - | chr3.1:64688533-64688552 | MS.gene70561:CDS | 40.0% | |
| TGCAGAATTGACTGTTACCA+TGG | - | chr3.1:64690193-64690212 | MS.gene70561:intron | 40.0% | |
| TGGGAGTGATTATCTTACCT+TGG | + | chr3.1:64688442-64688461 | None:intergenic | 40.0% | |
| TGTGTATTCGAATTCGGGAA+CGG | + | chr3.1:64688309-64688328 | None:intergenic | 40.0% | |
| TTAGGGTTAGGGTTAAGGTT+TGG | - | chr3.1:64688472-64688491 | MS.gene70561:CDS | 40.0% | |
| TTGAGAGCGACACGAAAAAT+GGG | - | chr3.1:64689406-64689425 | MS.gene70561:intron | 40.0% | |
| TTTGAGAGCGACACGAAAAA+TGG | - | chr3.1:64689405-64689424 | MS.gene70561:intron | 40.0% | |
| ! | AATAACATTTGCTGCAGACG+AGG | - | chr3.1:64691617-64691636 | MS.gene70561:CDS | 40.0% |
| ! | AGAGAGATTCTGGAGAATGT+AGG | - | chr3.1:64688543-64688562 | MS.gene70561:intron | 40.0% |
| ! | CTTTAGAGAGAGTAACGAGA+TGG | + | chr3.1:64688355-64688374 | None:intergenic | 40.0% |
| ! | GATTCTGGAGAATGTAGGTT+TGG | - | chr3.1:64688548-64688567 | MS.gene70561:intron | 40.0% |
| ! | GATTTTGCATTGTAGCTGCA+AGG | - | chr3.1:64688517-64688536 | MS.gene70561:CDS | 40.0% |
| ! | TTACATTTTGCCCGTGTGTT+TGG | - | chr3.1:64691843-64691862 | MS.gene70561:CDS | 40.0% |
| !! | ACCATGGTTATCGATTTGAC+AGG | - | chr3.1:64690209-64690228 | MS.gene70561:intron | 40.0% |
| !! | AGAGATTAGCCATAGGGTTT+TGG | - | chr3.1:64691663-64691682 | MS.gene70561:intron | 40.0% |
| !! | CCATGGTTATCGATTTGACA+GGG | - | chr3.1:64690210-64690229 | MS.gene70561:intron | 40.0% |
| !!! | GAGTCAGTTTTTTTTGGTGG+TGG | + | chr3.1:64691411-64691430 | None:intergenic | 40.0% |
| AACCCTATGGCTAATCTCTG+GGG | + | chr3.1:64691662-64691681 | None:intergenic | 45.0% | |
| AATTTGGGAGATTGAAGGGG+AGG | + | chr3.1:64691490-64691509 | None:intergenic | 45.0% | |
| ACACTGCCCAAGAAACTTCT+GGG | + | chr3.1:64690309-64690328 | None:intergenic | 45.0% | |
| ACCCTAACAACCTCCATGAA+GGG | + | chr3.1:64689886-64689905 | None:intergenic | 45.0% | |
| AGGAAATGTTGTTCAGTGGG+GGG | - | chr3.1:64690519-64690538 | MS.gene70561:intron | 45.0% | |
| AGGAGGGGATTAGAGGAAAA+GGG | + | chr3.1:64691458-64691477 | None:intergenic | 45.0% | |
| ATTGAAGAATCTGGGAGAGG+AGG | - | chr3.1:64691176-64691195 | MS.gene70561:intron | 45.0% | |
| ATTGACGATTCCCTTCATGG+AGG | - | chr3.1:64689873-64689892 | MS.gene70561:intron | 45.0% | |
| ATTTGGGAGATTGAAGGGGA+GGG | + | chr3.1:64691489-64691508 | None:intergenic | 45.0% | |
| CATTACGCCTCACCTTTGAT+TGG | - | chr3.1:64691002-64691021 | MS.gene70561:intron | 45.0% | |
| CCATGTCAACCAAAACCCTA+TGG | + | chr3.1:64691675-64691694 | None:intergenic | 45.0% | |
| CCCTGTCAAATCGATAACCA+TGG | + | chr3.1:64690213-64690232 | None:intergenic | 45.0% | |
| CCTGGATAATCCAAACACAC+GGG | + | chr3.1:64691856-64691875 | None:intergenic | 45.0% | |
| CGTGGTGTGTATTCGAATTC+GGG | + | chr3.1:64688314-64688333 | None:intergenic | 45.0% | |
| CTCTACAAATGACAGGTTCG+GGG | - | chr3.1:64691373-64691392 | MS.gene70561:CDS | 45.0% | |
| GAAATACCGGAGGCAAATCT+TGG | + | chr3.1:64691759-64691778 | None:intergenic | 45.0% | |
| GAAGCTAAGTAGTTAGAGGG+AGG | - | chr3.1:64689976-64689995 | MS.gene70561:intron | 45.0% | |
| GAGGGTTTGGAGAAAAAGGA+AGG | - | chr3.1:64691139-64691158 | MS.gene70561:intron | 45.0% | |
| GCAACAATGTGCCAACTATG+AGG | - | chr3.1:64689319-64689338 | MS.gene70561:intron | 45.0% | |
| GCAAGCAGCTCTTCTAAATG+AGG | - | chr3.1:64691955-64691974 | MS.gene70561:CDS | 45.0% | |
| GCGTGGTGTGTATTCGAATT+CGG | + | chr3.1:64688315-64688334 | None:intergenic | 45.0% | |
| GGAGACTGATGCTTCTTGAT+CGG | + | chr3.1:64688219-64688238 | None:intergenic | 45.0% | |
| GTGGTAGATACACTGCAATG+TGG | - | chr3.1:64689690-64689709 | MS.gene70561:intron | 45.0% | |
| GTGTATTCGAATTCGGGAAC+GGG | + | chr3.1:64688308-64688327 | None:intergenic | 45.0% | |
| TAACACATGTGGGGTGATGT+GGG | + | chr3.1:64690471-64690490 | None:intergenic | 45.0% | |
| TACCCTAACAACCTCCATGA+AGG | + | chr3.1:64689887-64689906 | None:intergenic | 45.0% | |
| TCAGTCTCCACAGAAGTTTC+TGG | - | chr3.1:64688230-64688249 | MS.gene70561:CDS | 45.0% | |
| TCCAAAACCTTCGAAGTTGC+AGG | - | chr3.1:64688278-64688297 | MS.gene70561:CDS | 45.0% | |
| TCCCTTCATGGAGGTTGTTA+GGG | - | chr3.1:64689882-64689901 | MS.gene70561:intron | 45.0% | |
| TTCCCTTCATGGAGGTTGTT+AGG | - | chr3.1:64689881-64689900 | MS.gene70561:intron | 45.0% | |
| TTGAAGAATCTGGGAGAGGA+GGG | - | chr3.1:64691177-64691196 | MS.gene70561:intron | 45.0% | |
| ! | AATGTACTGGAGGAGGGTTT+TGG | - | chr3.1:64691259-64691278 | MS.gene70561:intron | 45.0% |
| ! | ACCTGCAACTTCGAAGGTTT+TGG | + | chr3.1:64688282-64688301 | None:intergenic | 45.0% |
| ! | ATACCCCAGAGATTAGCCAT+AGG | - | chr3.1:64691656-64691675 | MS.gene70561:intron | 45.0% |
| ! | ATGTACTGGAGGAGGGTTTT+GGG | - | chr3.1:64691260-64691279 | MS.gene70561:intron | 45.0% |
| ! | GCTGATTCCAGAAACTTCTG+TGG | + | chr3.1:64688240-64688259 | None:intergenic | 45.0% |
| ! | TACCCCAGAGATTAGCCATA+GGG | - | chr3.1:64691657-64691676 | MS.gene70561:intron | 45.0% |
| !!! | AGTTTTTTTTGGTGGTGGCC+GGG | + | chr3.1:64691406-64691425 | None:intergenic | 45.0% |
| !!! | ATTTGTTTTGAGGGGGGAGT+AGG | - | chr3.1:64689349-64689368 | MS.gene70561:intron | 45.0% |
| !!! | CAGTTTTTTTTGGTGGTGGC+CGG | + | chr3.1:64691407-64691426 | None:intergenic | 45.0% |
| !!! | CCATAGGGTTTTGGTTGACA+TGG | - | chr3.1:64691672-64691691 | MS.gene70561:intron | 45.0% |
| !!! | TTTTGAGTTCCCCTACCGTA+GGG | + | chr3.1:64691239-64691258 | None:intergenic | 45.0% |
| !!! | TTTTTGAGTTCCCCTACCGT+AGG | + | chr3.1:64691240-64691259 | None:intergenic | 45.0% |
| AACTCAAAACCCCCTACGGT+AGG | - | chr3.1:64691225-64691244 | MS.gene70561:intron | 50.0% | |
| ACTCAAAACCCCCTACGGTA+GGG | - | chr3.1:64691226-64691245 | MS.gene70561:intron | 50.0% | |
| AGATGAAGTAGCTCCGTGTG+AGG | - | chr3.1:64689235-64689254 | MS.gene70561:intron | 50.0% | |
| AGGGGAGGGTTTGGAGAAAA+AGG | - | chr3.1:64691135-64691154 | MS.gene70561:intron | 50.0% | |
| CCCGTGTGTTTGGATTATCC+AGG | - | chr3.1:64691853-64691872 | MS.gene70561:CDS | 50.0% | |
| CTTTCCATCTGAGCCTCACA+CGG | + | chr3.1:64689251-64689270 | None:intergenic | 50.0% | |
| GACACTGCCCAAGAAACTTC+TGG | + | chr3.1:64690310-64690329 | None:intergenic | 50.0% | |
| GAGGAGGGGATTAGAGGAAA+AGG | + | chr3.1:64691459-64691478 | None:intergenic | 50.0% | |
| GCCGCAGAATATAGATCCCA+AGG | - | chr3.1:64688422-64688441 | MS.gene70561:intron | 50.0% | |
| GGAGAGTTTACCGTCCAATG+TGG | - | chr3.1:64688575-64688594 | MS.gene70561:intron | 50.0% | |
| GGGTTTACCTGCAACTTCGA+AGG | + | chr3.1:64688288-64688307 | None:intergenic | 50.0% | |
| GTAACACATGTGGGGTGATG+TGG | + | chr3.1:64690472-64690491 | None:intergenic | 50.0% | |
| GTGAGGCTCAGATGGAAAGT+TGG | - | chr3.1:64689252-64689271 | MS.gene70561:intron | 50.0% | |
| GTGCAGAACACTAGCCCAAT+TGG | - | chr3.1:64689211-64689230 | MS.gene70561:intron | 50.0% | |
| TGACATGGCTGAGCATAGGA+AGG | - | chr3.1:64691687-64691706 | MS.gene70561:intron | 50.0% | |
| TGGTTGACATGGCTGAGCAT+AGG | - | chr3.1:64691683-64691702 | MS.gene70561:intron | 50.0% | |
| TTAGGGTCTGTTCGGGAGAT+TGG | - | chr3.1:64691107-64691126 | MS.gene70561:intron | 50.0% | |
| TTCAAGACGCTTCTCAGCAG+CGG | + | chr3.1:64691927-64691946 | None:intergenic | 50.0% | |
| TTCATTGAGGAAGACCGGTG+TGG | - | chr3.1:64688770-64688789 | MS.gene70561:intron | 50.0% | |
| TTTGGGAGATTGAAGGGGAG+GGG | + | chr3.1:64691488-64691507 | None:intergenic | 50.0% | |
| ! | GGAGAATGTAGGTTTGGCTC+AGG | - | chr3.1:64688554-64688573 | MS.gene70561:intron | 50.0% |
| ! | TTTGAGTTCCCCTACCGTAG+GGG | + | chr3.1:64691238-64691257 | None:intergenic | 50.0% |
| !!! | GTTTTTTTTGGTGGTGGCCG+GGG | + | chr3.1:64691405-64691424 | None:intergenic | 50.0% |
| ACAGGAGAGGAGGGGATTAG+AGG | + | chr3.1:64691465-64691484 | None:intergenic | 55.0% | |
| ACCGTCCAATGTGGTTGCGT+CGG | - | chr3.1:64688584-64688603 | MS.gene70561:intron | 55.0% | |
| AGACCGGTGTGGAGGAGAAA+AGG | - | chr3.1:64688781-64688800 | MS.gene70561:intron | 55.0% | |
| AGCATAGGAAGGAGCTGGAG+AGG | - | chr3.1:64691698-64691717 | MS.gene70561:intron | 55.0% | |
| ATCTGGGAGAGGAGGGCTTT+AGG | - | chr3.1:64691184-64691203 | MS.gene70561:intron | 55.0% | |
| ATTGAGGAAGACCGGTGTGG+AGG | - | chr3.1:64688773-64688792 | MS.gene70561:intron | 55.0% | |
| CTCAAAACCCCCTACGGTAG+GGG | - | chr3.1:64691227-64691246 | MS.gene70561:intron | 55.0% | |
| GACCGGTGTGGAGGAGAAAA+GGG | - | chr3.1:64688782-64688801 | MS.gene70561:intron | 55.0% | |
| GGTCTGTTCGGGAGATTGGA+GGG | - | chr3.1:64691111-64691130 | MS.gene70561:intron | 55.0% | |
| GTCTGTTCGGGAGATTGGAG+GGG | - | chr3.1:64691112-64691131 | MS.gene70561:intron | 55.0% | |
| TCTGGGAGAGGAGGGCTTTA+GGG | - | chr3.1:64691185-64691204 | MS.gene70561:intron | 55.0% | |
| TGCAAGTGAGAGACACTGCG+TGG | + | chr3.1:64688332-64688351 | None:intergenic | 55.0% | |
| TGTTCAGTGGGGGGATTGCA+AGG | - | chr3.1:64690528-64690547 | MS.gene70561:intron | 55.0% | |
| TTGAGTTCCCCTACCGTAGG+GGG | + | chr3.1:64691237-64691256 | None:intergenic | 55.0% | |
| ! | AGCCCTTTTCTCCTCCACAC+CGG | + | chr3.1:64688787-64688806 | None:intergenic | 55.0% |
| ! | AGGCAGCCAGAGCTTTATCC+TGG | + | chr3.1:64691874-64691893 | None:intergenic | 55.0% |
| ! | CAAGGGGGACAGAGAGCTTT+TGG | - | chr3.1:64689140-64689159 | MS.gene70561:intron | 55.0% |
| !! | TCTCTGGGGTATAGCCCACA+CGG | + | chr3.1:64691648-64691667 | None:intergenic | 55.0% |
| !!! | TACTGGAGGAGGGTTTTGGG+AGG | - | chr3.1:64691263-64691282 | MS.gene70561:intron | 55.0% |
| AGCTCCGTGTGAGGCTCAGA+TGG | - | chr3.1:64689244-64689263 | MS.gene70561:intron | 60.0% | |
| ATCACGAGCGACGAGACGAG+CGG | + | chr3.1:64688390-64688409 | None:intergenic | 60.0% | |
| CAGACGAGGCTCAACCGTGT+GGG | - | chr3.1:64691631-64691650 | MS.gene70561:CDS | 60.0% | |
| GAGACGAGCGGCTTCGTCTT+TGG | + | chr3.1:64688378-64688397 | None:intergenic | 60.0% | |
| GAGATTGAAGGGGAGGGGAC+AGG | + | chr3.1:64691483-64691502 | None:intergenic | 60.0% | |
| GCCGACGCAACCACATTGGA+CGG | + | chr3.1:64688588-64688607 | None:intergenic | 60.0% | |
| GGCTGAGCATAGGAAGGAGC+TGG | - | chr3.1:64691693-64691712 | MS.gene70561:intron | 60.0% | |
| GGGTCTGTTCGGGAGATTGG+AGG | - | chr3.1:64691110-64691129 | MS.gene70561:intron | 60.0% | |
| GTTCGGGAGATTGGAGGGGA+GGG | - | chr3.1:64691116-64691135 | MS.gene70561:intron | 60.0% | |
| TGTTCGGGAGATTGGAGGGG+AGG | - | chr3.1:64691115-64691134 | MS.gene70561:intron | 60.0% | |
| TTCGGGAGATTGGAGGGGAG+GGG | - | chr3.1:64691117-64691136 | MS.gene70561:intron | 60.0% | |
| ! | CTGGGAGAGGAGGGCTTTAG+GGG | - | chr3.1:64691186-64691205 | MS.gene70561:intron | 60.0% |
| CAGGTTCGGGGTTCGAACCC+CGG | - | chr3.1:64691385-64691404 | MS.gene70561:CDS | 65.0% | |
| GCAGACGAGGCTCAACCGTG+TGG | - | chr3.1:64691630-64691649 | MS.gene70561:CDS | 65.0% | |
| GGAGATTGGAGGGGAGGGGA+GGG | - | chr3.1:64691121-64691140 | MS.gene70561:intron | 65.0% | |
| TGAAGGGGAGGGGACAGGAG+AGG | + | chr3.1:64691478-64691497 | None:intergenic | 65.0% | |
| TTGGAGGGGAGGGGAGGGTT+TGG | - | chr3.1:64691126-64691145 | MS.gene70561:intron | 65.0% | |
| ! | CAATGTGGTTGCGTCGGCGC+AGG | - | chr3.1:64688590-64688609 | MS.gene70561:intron | 65.0% |
| ! | CTGCGCCGACGCAACCACAT+TGG | + | chr3.1:64688592-64688611 | None:intergenic | 65.0% |
| AGGGGAGGGGACAGGAGAGG+AGG | + | chr3.1:64691475-64691494 | None:intergenic | 70.0% | |
| GGGAGATTGGAGGGGAGGGG+AGG | - | chr3.1:64691120-64691139 | MS.gene70561:intron | 70.0% | |
| GGGAGGGGACAGGAGAGGAG+GGG | + | chr3.1:64691473-64691492 | None:intergenic | 70.0% | |
| GGGGAGGGGACAGGAGAGGA+GGG | + | chr3.1:64691474-64691493 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 64688212 | 64691982 | 64688212 | ID=MS.gene70561 |
| chr3.1 | mRNA | 64688212 | 64691982 | 64688212 | ID=MS.gene70561.t1;Parent=MS.gene70561 |
| chr3.1 | exon | 64691751 | 64691982 | 64691751 | ID=MS.gene70561.t1.exon1;Parent=MS.gene70561.t1 |
| chr3.1 | CDS | 64691751 | 64691982 | 64691751 | ID=cds.MS.gene70561.t1;Parent=MS.gene70561.t1 |
| chr3.1 | exon | 64691530 | 64691662 | 64691530 | ID=MS.gene70561.t1.exon2;Parent=MS.gene70561.t1 |
| chr3.1 | CDS | 64691530 | 64691662 | 64691530 | ID=cds.MS.gene70561.t1;Parent=MS.gene70561.t1 |
| chr3.1 | exon | 64691314 | 64691448 | 64691314 | ID=MS.gene70561.t1.exon3;Parent=MS.gene70561.t1 |
| chr3.1 | CDS | 64691314 | 64691448 | 64691314 | ID=cds.MS.gene70561.t1;Parent=MS.gene70561.t1 |
| chr3.1 | exon | 64690854 | 64690977 | 64690854 | ID=MS.gene70561.t1.exon4;Parent=MS.gene70561.t1 |
| chr3.1 | CDS | 64690854 | 64690977 | 64690854 | ID=cds.MS.gene70561.t1;Parent=MS.gene70561.t1 |
| chr3.1 | exon | 64688423 | 64688560 | 64688423 | ID=MS.gene70561.t1.exon5;Parent=MS.gene70561.t1 |
| chr3.1 | CDS | 64688423 | 64688560 | 64688423 | ID=cds.MS.gene70561.t1;Parent=MS.gene70561.t1 |
| chr3.1 | exon | 64688212 | 64688319 | 64688212 | ID=MS.gene70561.t1.exon6;Parent=MS.gene70561.t1 |
| chr3.1 | CDS | 64688212 | 64688319 | 64688212 | ID=cds.MS.gene70561.t1;Parent=MS.gene70561.t1 |
| Gene Sequence |
| Protein sequence |
