Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71595.t1 | XP_013469959.1 | 99.8 | 450 | 1 | 0 | 1 | 450 | 1 | 450 | 2.40E-263 | 917.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71595.t1 | P33629 | 98.0 | 450 | 9 | 0 | 1 | 450 | 1 | 450 | 1.6e-260 | 899.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71595.t1 | A0A072VQC8 | 99.8 | 450 | 1 | 0 | 1 | 450 | 1 | 450 | 1.7e-263 | 917.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049149 | MS.gene71595 | -0.811377 | 7.22E-51 | -1.69E-46 |
| MS.gene049230 | MS.gene71595 | -0.80838 | 3.19E-50 | -1.69E-46 |
| MS.gene050426 | MS.gene71595 | 0.856372 | 3.36E-62 | -1.69E-46 |
| MS.gene050642 | MS.gene71595 | -0.809882 | 1.52E-50 | -1.69E-46 |
| MS.gene051373 | MS.gene71595 | -0.810831 | 9.48E-51 | -1.69E-46 |
| MS.gene051983 | MS.gene71595 | -0.83312 | 6.40E-56 | -1.69E-46 |
| MS.gene052077 | MS.gene71595 | -0.833222 | 6.04E-56 | -1.69E-46 |
| MS.gene052188 | MS.gene71595 | -0.820024 | 8.54E-53 | -1.69E-46 |
| MS.gene052309 | MS.gene71595 | 0.809207 | 2.12E-50 | -1.69E-46 |
| MS.gene054349 | MS.gene71595 | -0.806292 | 8.83E-50 | -1.69E-46 |
| MS.gene054930 | MS.gene71595 | -0.851334 | 9.50E-61 | -1.69E-46 |
| MS.gene05553 | MS.gene71595 | -0.816181 | 6.31E-52 | -1.69E-46 |
| MS.gene055701 | MS.gene71595 | -0.802409 | 5.69E-49 | -1.69E-46 |
| MS.gene056659 | MS.gene71595 | -0.814786 | 1.29E-51 | -1.69E-46 |
| MS.gene056723 | MS.gene71595 | -0.833371 | 5.54E-56 | -1.69E-46 |
| MS.gene056979 | MS.gene71595 | -0.813334 | 2.70E-51 | -1.69E-46 |
| MS.gene057396 | MS.gene71595 | -0.800204 | 1.61E-48 | -1.69E-46 |
| MS.gene058142 | MS.gene71595 | -0.810122 | 1.35E-50 | -1.69E-46 |
| MS.gene058710 | MS.gene71595 | -0.831916 | 1.27E-55 | -1.69E-46 |
| MS.gene059285 | MS.gene71595 | -0.851459 | 8.75E-61 | -1.69E-46 |
| MS.gene059420 | MS.gene71595 | -0.805083 | 1.58E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71595.t1 | MTR_1g106005 | 99.778 | 450 | 1 | 0 | 1 | 450 | 1 | 450 | 0.0 | 937 |
| MS.gene71595.t1 | MTR_3g110720 | 97.773 | 449 | 10 | 0 | 1 | 449 | 1 | 449 | 0.0 | 914 |
| MS.gene71595.t1 | MTR_4g097830 | 97.118 | 451 | 12 | 1 | 1 | 450 | 1 | 451 | 0.0 | 910 |
| MS.gene71595.t1 | MTR_8g085980 | 92.644 | 435 | 32 | 0 | 1 | 435 | 1 | 435 | 0.0 | 832 |
| MS.gene71595.t1 | MTR_7g085800 | 91.196 | 443 | 38 | 1 | 1 | 443 | 1 | 442 | 0.0 | 827 |
| MS.gene71595.t1 | MTR_6g029190 | 83.149 | 451 | 72 | 2 | 1 | 450 | 1 | 448 | 0.0 | 776 |
| MS.gene71595.t1 | MTR_2g041670 | 72.829 | 449 | 117 | 2 | 1 | 449 | 1 | 444 | 0.0 | 653 |
| MS.gene71595.t1 | MTR_2g041400 | 74.359 | 429 | 105 | 2 | 1 | 429 | 1 | 424 | 0.0 | 640 |
| MS.gene71595.t1 | MTR_4g094535 | 41.705 | 434 | 243 | 2 | 1 | 434 | 1 | 424 | 4.57e-124 | 368 |
| MS.gene71595.t1 | MTR_7g089120 | 42.105 | 437 | 237 | 4 | 1 | 434 | 1 | 424 | 1.37e-123 | 367 |
| MS.gene71595.t1 | MTR_4g017630 | 41.244 | 434 | 245 | 2 | 1 | 434 | 1 | 424 | 1.71e-123 | 367 |
| MS.gene71595.t1 | MTR_3g113970 | 40.961 | 437 | 244 | 3 | 1 | 434 | 1 | 426 | 2.15e-123 | 366 |
| MS.gene71595.t1 | MTR_4g019110 | 42.105 | 437 | 237 | 3 | 1 | 434 | 1 | 424 | 3.70e-123 | 366 |
| MS.gene71595.t1 | MTR_4g019090 | 41.244 | 434 | 245 | 2 | 1 | 434 | 1 | 424 | 9.31e-123 | 365 |
| MS.gene71595.t1 | MTR_8g107250 | 41.244 | 434 | 246 | 2 | 1 | 434 | 1 | 425 | 1.21e-122 | 364 |
| MS.gene71595.t1 | MTR_1g101130 | 41.244 | 434 | 245 | 2 | 1 | 434 | 1 | 424 | 1.60e-122 | 364 |
| MS.gene71595.t1 | MTR_2g031310 | 41.244 | 434 | 245 | 2 | 1 | 434 | 1 | 424 | 2.35e-122 | 363 |
| MS.gene71595.t1 | MTR_8g098360 | 39.545 | 440 | 256 | 2 | 1 | 440 | 1 | 430 | 4.44e-121 | 360 |
| MS.gene71595.t1 | MTR_3g063410 | 98.052 | 154 | 3 | 0 | 252 | 405 | 24 | 177 | 4.39e-111 | 325 |
| MS.gene71595.t1 | MTR_3g063410 | 97.826 | 138 | 3 | 0 | 268 | 405 | 1 | 138 | 3.00e-97 | 289 |
| MS.gene71595.t1 | MTR_7g117050 | 31.390 | 446 | 283 | 9 | 2 | 433 | 3 | 439 | 2.92e-76 | 246 |
| MS.gene71595.t1 | MTR_6g075280 | 46.875 | 96 | 32 | 1 | 355 | 450 | 608 | 684 | 3.32e-16 | 81.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71595.t1 | AT1G04820 | 96.000 | 450 | 18 | 0 | 1 | 450 | 1 | 450 | 0.0 | 905 |
| MS.gene71595.t1 | AT1G50010 | 96.000 | 450 | 18 | 0 | 1 | 450 | 1 | 450 | 0.0 | 905 |
| MS.gene71595.t1 | AT4G14960 | 95.778 | 450 | 19 | 0 | 1 | 450 | 1 | 450 | 0.0 | 904 |
| MS.gene71595.t1 | AT5G19780 | 93.563 | 435 | 28 | 0 | 1 | 435 | 1 | 435 | 0.0 | 838 |
| MS.gene71595.t1 | AT5G19770 | 93.563 | 435 | 28 | 0 | 1 | 435 | 1 | 435 | 0.0 | 838 |
| MS.gene71595.t1 | AT1G64740 | 90.115 | 435 | 43 | 0 | 1 | 435 | 1 | 435 | 0.0 | 812 |
| MS.gene71595.t1 | AT4G14960 | 93.612 | 407 | 19 | 1 | 1 | 407 | 1 | 400 | 0.0 | 796 |
| MS.gene71595.t1 | AT1G75780 | 41.475 | 434 | 245 | 2 | 1 | 434 | 1 | 425 | 2.27e-125 | 371 |
| MS.gene71595.t1 | AT5G12250 | 41.648 | 437 | 239 | 4 | 1 | 434 | 1 | 424 | 7.54e-124 | 367 |
| MS.gene71595.t1 | AT5G62700 | 41.475 | 434 | 244 | 2 | 1 | 434 | 1 | 424 | 1.59e-123 | 367 |
| MS.gene71595.t1 | AT5G62690 | 41.475 | 434 | 244 | 2 | 1 | 434 | 1 | 424 | 1.59e-123 | 367 |
| MS.gene71595.t1 | AT1G20010 | 41.014 | 434 | 247 | 2 | 1 | 434 | 1 | 425 | 5.73e-123 | 365 |
| MS.gene71595.t1 | AT2G29550 | 41.244 | 434 | 245 | 2 | 1 | 434 | 1 | 424 | 9.34e-123 | 365 |
| MS.gene71595.t1 | AT4G20890 | 41.475 | 434 | 244 | 2 | 1 | 434 | 1 | 424 | 1.45e-122 | 364 |
| MS.gene71595.t1 | AT5G23860 | 41.244 | 434 | 245 | 2 | 1 | 434 | 1 | 424 | 2.00e-122 | 364 |
| MS.gene71595.t1 | AT5G23860 | 41.244 | 434 | 245 | 2 | 1 | 434 | 1 | 424 | 2.00e-122 | 364 |
| MS.gene71595.t1 | AT5G44340 | 41.244 | 434 | 245 | 3 | 1 | 434 | 1 | 424 | 1.75e-120 | 359 |
| MS.gene71595.t1 | AT5G05620 | 32.063 | 446 | 280 | 9 | 2 | 433 | 3 | 439 | 1.74e-77 | 249 |
| MS.gene71595.t1 | AT3G61650 | 31.614 | 446 | 282 | 9 | 2 | 433 | 3 | 439 | 3.74e-76 | 246 |
Find 139 sgRNAs with CRISPR-Local
Find 176 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACTGATGTTGCTGTTCTTC+TGG | 0.208803 | 1.4:-81947201 | MS.gene71595:CDS |
| AGAAAGCATGAAATGGATTC+TGG | 0.259381 | 1.4:+81946885 | None:intergenic |
| ATGAAATGGATTCTGGGATA+TGG | 0.263566 | 1.4:+81946892 | None:intergenic |
| ACTGCTTCTTTGAGGTTTGA+TGG | 0.277274 | 1.4:-81946958 | MS.gene71595:CDS |
| GAGCGTCTGTCTGTTGATTA+TGG | 0.277497 | 1.4:-81947329 | MS.gene71595:CDS |
| GGAGGAACTGGTTCTGGTCT+TGG | 0.278416 | 1.4:-81947365 | MS.gene71595:CDS |
| CATCCTTGACTGCTTCTTTG+AGG | 0.310525 | 1.4:-81946966 | MS.gene71595:CDS |
| CATCGGTCAAGCCGGTATTC+AGG | 0.312386 | 1.4:-81948747 | MS.gene71595:CDS |
| CCTCTCCACCCACTCCCTCT+TGG | 0.347748 | 1.4:-81947228 | MS.gene71595:CDS |
| GCCTTCTCAGCAGATATAAC+TGG | 0.348083 | 1.4:+81946853 | None:intergenic |
| CAAGAGGACCATTCAGTTTG+TGG | 0.350369 | 1.4:-81946662 | MS.gene71595:CDS |
| CAGCCACCTACTGTTGTTCC+TGG | 0.350820 | 1.4:-81946601 | MS.gene71595:CDS |
| CCGCGAGGATCTTGCTGCTT+TGG | 0.359499 | 1.4:-81946410 | MS.gene71595:CDS |
| TTCAGGTCGGAAATGCTTGC+TGG | 0.378485 | 1.4:-81948730 | MS.gene71595:CDS |
| AGCAAGATCCTCGCGGGCTT+CGG | 0.379388 | 1.4:+81946417 | None:intergenic |
| GTTGGAGGAGGAACTGGTTC+TGG | 0.384483 | 1.4:-81947371 | MS.gene71595:CDS |
| TTGCCACTGATGAGCTGCTC+AGG | 0.398345 | 1.4:+81947623 | None:intergenic |
| AATGCTGTTGGAGGAGGAAC+TGG | 0.399457 | 1.4:-81947377 | MS.gene71595:CDS |
| CAGTCTTGTCACTCGGCATT+TGG | 0.399542 | 1.4:+81947786 | None:intergenic |
| CTGGTATGTGGGTGAGGGTA+TGG | 0.404210 | 1.4:-81946455 | MS.gene71595:CDS |
| CCTTAACCGTCTTGTTTCTC+AGG | 0.406634 | 1.4:-81947114 | MS.gene71595:intron |
| TCACTCGGCATTTGGCCATC+AGG | 0.408719 | 1.4:+81947794 | None:intergenic |
| GAAAAGGATTATGAAGAAGT+TGG | 0.409613 | 1.4:-81946388 | MS.gene71595:CDS |
| TTTGTGGATTGGTGCCCTAC+TGG | 0.413566 | 1.4:-81946646 | MS.gene71595:CDS |
| AGAGATCGTTGATCTGTGTT+TGG | 0.419543 | 1.4:-81947456 | MS.gene71595:CDS |
| AACACCTTCTTCAGCGAGAC+TGG | 0.421898 | 1.4:-81947740 | MS.gene71595:CDS |
| ATGGAAAGAAATCCAAGCTT+GGG | 0.425337 | 1.4:-81947310 | MS.gene71595:CDS |
| ACAAGTGTGGCTGAGGTGTT+TGG | 0.429571 | 1.4:-81946529 | MS.gene71595:CDS |
| TACTGTCTATCCCTCCCCTC+AGG | 0.434518 | 1.4:-81947285 | MS.gene71595:CDS |
| GGATCTTGCTGCTTTGGAAA+AGG | 0.436770 | 1.4:-81946404 | MS.gene71595:CDS |
| ACGGTTAAGGTTGGTGTAAG+TGG | 0.452971 | 1.4:+81947127 | None:intergenic |
| GACAGCAGCATTCACATCCT+TGG | 0.453229 | 1.4:+81946699 | None:intergenic |
| TGCATTTGTTCACTGGTATG+TGG | 0.454287 | 1.4:-81946467 | MS.gene71595:CDS |
| TTCTTCAGCGAGACTGGTGC+TGG | 0.455019 | 1.4:-81947734 | MS.gene71595:CDS |
| CATATGAAGAAAGCATGAAA+TGG | 0.460970 | 1.4:+81946878 | None:intergenic |
| CACAAACTGAATGGTCCTCT+TGG | 0.463910 | 1.4:+81946663 | None:intergenic |
| CCTGAGAAACAAGACGGTTA+AGG | 0.472342 | 1.4:+81947114 | None:intergenic |
| CCAAGCGTGCATTTGTTCAC+TGG | 0.476016 | 1.4:-81946474 | MS.gene71595:CDS |
| TGTTCACTGGTATGTGGGTG+AGG | 0.477980 | 1.4:-81946461 | MS.gene71595:CDS |
| GAAGAAGTTGGTGCCGAGTC+TGG | 0.479857 | 1.4:-81946376 | MS.gene71595:CDS |
| TGAAATGGATTCTGGGATAT+GGG | 0.482192 | 1.4:+81946893 | None:intergenic |
| GAAAGCATGAAATGGATTCT+GGG | 0.486512 | 1.4:+81946886 | None:intergenic |
| GTGGGTGAGGGTATGGAAGA+AGG | 0.492111 | 1.4:-81946448 | MS.gene71595:CDS |
| ATGACCACGGGCAAAGTTGT+TGG | 0.493110 | 1.4:+81947589 | None:intergenic |
| GATATGGGACCAAGTTGGTC+TGG | 0.495701 | 1.4:+81946908 | None:intergenic |
| AGCATTTCCGACCTGAATAC+CGG | 0.501769 | 1.4:+81948736 | None:intergenic |
| GGACCATTCAGTTTGTGGAT+TGG | 0.503034 | 1.4:-81946657 | MS.gene71595:CDS |
| TATGGAAAGAAATCCAAGCT+TGG | 0.504088 | 1.4:-81947311 | MS.gene71595:CDS |
| AAGCTATCTATGACATCTGT+AGG | 0.504342 | 1.4:-81947172 | MS.gene71595:CDS |
| TCCTGGTGGTGACCTTGCTA+AGG | 0.511101 | 1.4:-81946584 | MS.gene71595:CDS |
| TGAGGGCGGTGATGAAGATA+TGG | 0.511219 | 1.4:-81946353 | MS.gene71595:CDS |
| CAGTGTGCTCCAAGAGGGAG+TGG | 0.513536 | 1.4:+81947219 | None:intergenic |
| ACAGCAGCATTCACATCCTT+GGG | 0.514766 | 1.4:+81946700 | None:intergenic |
| CCAGTGAACAAATGCACGCT+TGG | 0.525328 | 1.4:+81946474 | None:intergenic |
| CACTTAGCCATCATAGATGA+TGG | 0.525506 | 1.4:+81946781 | None:intergenic |
| CCGAGTGACAAGACTGTTGG+AGG | 0.526598 | 1.4:-81947779 | MS.gene71595:CDS |
| CCCTCGCCATGGAAAGTACA+TGG | 0.526872 | 1.4:-81946755 | MS.gene71595:CDS |
| TTCTTATATGCACAGCCTGA+TGG | 0.528986 | 1.4:-81947809 | MS.gene71595:intron |
| AAACTCAACAAGTGTGGCTG+AGG | 0.529684 | 1.4:-81946536 | MS.gene71595:CDS |
| GTGGAGAGGACACTGTTGTA+TGG | 0.536266 | 1.4:+81947242 | None:intergenic |
| AGCACCAGTCTCGCTGAAGA+AGG | 0.536901 | 1.4:+81947736 | None:intergenic |
| GATAACTGCACTGGTCTCCA+AGG | 0.539021 | 1.4:-81947413 | MS.gene71595:CDS |
| ATGCCGAGTGACAAGACTGT+TGG | 0.545145 | 1.4:-81947782 | MS.gene71595:CDS |
| TGATGGCTCAAAAGCACTGT+TGG | 0.546926 | 1.4:+81946798 | None:intergenic |
| GACTGAATTCCAGACCAACT+TGG | 0.549713 | 1.4:-81946917 | MS.gene71595:CDS |
| GCACCAATCCACAAACTGAA+TGG | 0.551570 | 1.4:+81946654 | None:intergenic |
| GAGGTGGAAACCTGAGGGGA+GGG | 0.551933 | 1.4:+81947275 | None:intergenic |
| ATAGACAGTAAACCCAAGCT+TGG | 0.556586 | 1.4:+81947298 | None:intergenic |
| CGGTTAAGGTTGGTGTAAGT+GGG | 0.558069 | 1.4:+81947128 | None:intergenic |
| CAACAGAGGTGGAAACCTGA+GGG | 0.558387 | 1.4:+81947270 | None:intergenic |
| AGCAAGCCATGTACTTTCCA+TGG | 0.560681 | 1.4:+81946749 | None:intergenic |
| TACTGTCTCGAACACGGCAT+CGG | 0.561154 | 1.4:-81948701 | MS.gene71595:CDS |
| TCAGGTCGGAAATGCTTGCT+GGG | 0.562273 | 1.4:-81948729 | MS.gene71595:CDS |
| GCTGCTCAGGATGGAAGAGC+TGG | 0.564014 | 1.4:+81947636 | None:intergenic |
| GTTATCGATGAGGTGAGGAC+TGG | 0.564950 | 1.4:-81947668 | MS.gene71595:CDS |
| GTTGGTGCCGAGTCTGGTGA+GGG | 0.565547 | 1.4:-81946370 | MS.gene71595:CDS |
| TCAGTTCACATCGGTCAAGC+CGG | 0.567216 | 1.4:-81948755 | MS.gene71595:CDS |
| AAACCTCAAAGAAGCAGTCA+AGG | 0.571224 | 1.4:+81946963 | None:intergenic |
| AAGCTTGCTGATAACTGCAC+TGG | 0.572122 | 1.4:-81947422 | MS.gene71595:CDS |
| CAAAGCAGCAAGATCCTCGC+GGG | 0.573367 | 1.4:+81946411 | None:intergenic |
| ACCACGGGCAAAGTTGTTGG+CGG | 0.573940 | 1.4:+81947592 | None:intergenic |
| CACTGATGAGCTGCTCAGGA+TGG | 0.573952 | 1.4:+81947627 | None:intergenic |
| TGCCCTACTGGTTTCAAGTG+TGG | 0.577249 | 1.4:-81946634 | MS.gene71595:CDS |
| GCATTTGTTCACTGGTATGT+GGG | 0.578176 | 1.4:-81946466 | MS.gene71595:CDS |
| ATCACCGCCCTCACCAGACT+CGG | 0.580489 | 1.4:+81946363 | None:intergenic |
| TCCAGTTATATCTGCTGAGA+AGG | 0.585678 | 1.4:-81946854 | MS.gene71595:CDS |
| GCCATGTACTTTCCATGGCG+AGG | 0.586030 | 1.4:+81946754 | None:intergenic |
| ACCTTAGCAAGGTCACCACC+AGG | 0.592703 | 1.4:+81946583 | None:intergenic |
| GTTCACTGGTATGTGGGTGA+GGG | 0.594621 | 1.4:-81946460 | MS.gene71595:CDS |
| CCATGTACTTTCCATGGCGA+GGG | 0.595056 | 1.4:+81946755 | None:intergenic |
| AGTTGGTGCCGAGTCTGGTG+AGG | 0.599254 | 1.4:-81946371 | MS.gene71595:CDS |
| GTGCTCCAAGAGGGAGTGGG+TGG | 0.600125 | 1.4:+81947223 | None:intergenic |
| AGTGGGACGCTCAATGTCGA+GGG | 0.600615 | 1.4:+81947145 | None:intergenic |
| AGTGACAAGACTGTTGGAGG+CGG | 0.604399 | 1.4:-81947776 | MS.gene71595:CDS |
| AAGTGGGACGCTCAATGTCG+AGG | 0.610089 | 1.4:+81947144 | None:intergenic |
| CCGAGGTGATGTTGTTCCCA+AGG | 0.612147 | 1.4:-81946716 | MS.gene71595:CDS |
| CATCCTGAGCAGCTCATCAG+TGG | 0.614786 | 1.4:-81947626 | MS.gene71595:CDS |
| ACAACAGAGGTGGAAACCTG+AGG | 0.615914 | 1.4:+81947269 | None:intergenic |
| TATCAGCAAGCTTTCTGATG+CGG | 0.616085 | 1.4:+81947432 | None:intergenic |
| AGGATGGAAGAGCTGGCGAT+AGG | 0.617520 | 1.4:+81947643 | None:intergenic |
| CTGCCCTCTGTACCTTAGCA+AGG | 0.618015 | 1.4:+81946572 | None:intergenic |
| ATAACTGCACTGGTCTCCAA+GGG | 0.620138 | 1.4:-81947412 | MS.gene71595:CDS |
| GCCGCCAACAACTTTGCCCG+TGG | 0.620859 | 1.4:-81947593 | MS.gene71595:CDS |
| GCTAAGTGTGACCCTCGCCA+TGG | 0.621505 | 1.4:-81946766 | MS.gene71595:CDS |
| CCAAGAGGGAGTGGGTGGAG+AGG | 0.621744 | 1.4:+81947228 | None:intergenic |
| CTCACCTCATCGATAACAGT+GGG | 0.621848 | 1.4:+81947674 | None:intergenic |
| AACATCAGTGTGCTCCAAGA+GGG | 0.623268 | 1.4:+81947214 | None:intergenic |
| ATACCACACTTGAAACCAGT+AGG | 0.623812 | 1.4:+81946631 | None:intergenic |
| AGAAACAAGACGGTTAAGGT+TGG | 0.623820 | 1.4:+81947118 | None:intergenic |
| CCTCCAACAGTCTTGTCACT+CGG | 0.624881 | 1.4:+81947779 | None:intergenic |
| CCACCTACTGTTGTTCCTGG+TGG | 0.628220 | 1.4:-81946598 | MS.gene71595:CDS |
| TCACCACCAGGAACAACAGT+AGG | 0.629041 | 1.4:+81946595 | None:intergenic |
| TCTGGGATATGGGACCAAGT+TGG | 0.629717 | 1.4:+81946903 | None:intergenic |
| AGAGGTGGAAACCTGAGGGG+AGG | 0.631975 | 1.4:+81947274 | None:intergenic |
| GAGCTTTACTGTCTCGAACA+CGG | 0.642769 | 1.4:-81948707 | MS.gene71595:CDS |
| AGTGTGCTCCAAGAGGGAGT+GGG | 0.645027 | 1.4:+81947220 | None:intergenic |
| AATCAACAGACAGACGCTCA+AGG | 0.649850 | 1.4:+81947333 | None:intergenic |
| GATTTCAAACTCAACAAGTG+TGG | 0.651909 | 1.4:-81946542 | MS.gene71595:CDS |
| TGACCTTGCTAAGGTACAGA+GGG | 0.652678 | 1.4:-81946575 | MS.gene71595:CDS |
| CATACTGGTATAATGACCAC+GGG | 0.654535 | 1.4:+81947577 | None:intergenic |
| CAACATCAGTGTGCTCCAAG+AGG | 0.655535 | 1.4:+81947213 | None:intergenic |
| TACCACACTTGAAACCAGTA+GGG | 0.657871 | 1.4:+81946632 | None:intergenic |
| CCAAAGCAGCAAGATCCTCG+CGG | 0.663080 | 1.4:+81946410 | None:intergenic |
| CCACCAGGAACAACAGTAGG+TGG | 0.665309 | 1.4:+81946598 | None:intergenic |
| GTGACCTTGCTAAGGTACAG+AGG | 0.667763 | 1.4:-81946576 | MS.gene71595:CDS |
| ACATACTGGTATAATGACCA+CGG | 0.669902 | 1.4:+81947576 | None:intergenic |
| GGTGCCGAGTCTGGTGAGGG+CGG | 0.669914 | 1.4:-81946367 | MS.gene71595:CDS |
| GTATGGCTCAACAACAGAGG+TGG | 0.674184 | 1.4:+81947259 | None:intergenic |
| GGTCAAGCCGGTATTCAGGT+CGG | 0.675515 | 1.4:-81948743 | MS.gene71595:CDS |
| TGAGCCCACTGTTATCGATG+AGG | 0.676846 | 1.4:-81947678 | MS.gene71595:CDS |
| TCGCTACAATCAAAACCAAG+AGG | 0.680258 | 1.4:-81946678 | MS.gene71595:CDS |
| TAGCTACCTGAGAAACAAGA+CGG | 0.682350 | 1.4:+81947108 | None:intergenic |
| CCACTGTTATCGATGAGGTG+AGG | 0.685674 | 1.4:-81947673 | MS.gene71595:CDS |
| CCTCACCTCATCGATAACAG+TGG | 0.687640 | 1.4:+81947673 | None:intergenic |
| GAGTGCATTTCAGTTCACAT+CGG | 0.696942 | 1.4:-81948764 | MS.gene71595:CDS |
| GTTGTATGGCTCAACAACAG+AGG | 0.698181 | 1.4:+81947256 | None:intergenic |
| GCTTGCTGTTTGATGTACCG+AGG | 0.706496 | 1.4:-81946733 | MS.gene71595:CDS |
| AACAGAGGTGGAAACCTGAG+GGG | 0.715815 | 1.4:+81947271 | None:intergenic |
| CCTTGGGAACAACATCACCT+CGG | 0.723454 | 1.4:+81946716 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGATAAAATTGAAAAAACAA+CGG | + | chr1.4:81946572-81946591 | None:intergenic | 15.0% |
| !!! | ATTTTCCATGTTAAATTAAT+CGG | - | chr1.4:81946630-81946649 | MS.gene71595:CDS | 15.0% |
| !! | AGTATCAAACTTTAATTGAA+TGG | + | chr1.4:81947199-81947218 | None:intergenic | 20.0% |
| !! | ATCAAATTTAGAAACAATAC+AGG | + | chr1.4:81946612-81946631 | None:intergenic | 20.0% |
| !! | TCAATTAAAGTTTGATACTA+TGG | - | chr1.4:81947200-81947219 | MS.gene71595:CDS | 20.0% |
| !! | TTACATAACCTAATAACAAA+CGG | + | chr1.4:81946759-81946778 | None:intergenic | 20.0% |
| !! | TTACATAACCTAATAACATA+CGG | + | chr1.4:81947100-81947119 | None:intergenic | 20.0% |
| ! | ATAACAAATCTGAACGAAAA+TGG | + | chr1.4:81946471-81946490 | None:intergenic | 25.0% |
| ! | ATATATGTTATCTATGTTCG+TGG | - | chr1.4:81947063-81947082 | MS.gene71595:intron | 25.0% |
| ! | ATCACAAATGAGTTATAATG+TGG | + | chr1.4:81947577-81947596 | None:intergenic | 25.0% |
| ! | TATTAGATCCGTATGTTATT+AGG | - | chr1.4:81947089-81947108 | MS.gene71595:intron | 25.0% |
| ! | TTATTTCAAGAGCTCATATA+TGG | - | chr1.4:81947279-81947298 | MS.gene71595:CDS | 25.0% |
| ! | TTTCCTTAGATCTGAAAAAT+AGG | + | chr1.4:81946544-81946563 | None:intergenic | 25.0% |
| !! | AATCTGTTTGAGTTAATATG+TGG | - | chr1.4:81946931-81946950 | MS.gene71595:CDS | 25.0% |
| !!! | CTTTGTTTTTGATTGTTTTC+AGG | - | chr1.4:81948117-81948136 | MS.gene71595:intron | 25.0% |
| !!! | GTTGTTTTGTTATGTTATCT+TGG | - | chr1.4:81947002-81947021 | MS.gene71595:intron | 25.0% |
| !!! | TATTAGATCCGTTTGTTATT+AGG | - | chr1.4:81946748-81946767 | MS.gene71595:CDS | 25.0% |
| AAATCTGAACGAAAATGGAA+TGG | + | chr1.4:81946466-81946485 | None:intergenic | 30.0% | |
| AACAATCAACAATTGAGAAG+TGG | + | chr1.4:81947138-81947157 | None:intergenic | 30.0% | |
| ACAATTCTGATTGTGAATTG+CGG | - | chr1.4:81948046-81948065 | MS.gene71595:intron | 30.0% | |
| CAGATCCGATTAATTTAACA+TGG | + | chr1.4:81946638-81946657 | None:intergenic | 30.0% | |
| GAAAAGGATTATGAAGAAGT+TGG | - | chr1.4:81948724-81948743 | MS.gene71595:CDS | 30.0% | |
| TGTAATATTTGTGAAATCGC+TGG | - | chr1.4:81946698-81946717 | MS.gene71595:CDS | 30.0% | |
| ! | CATATGAAGAAAGCATGAAA+TGG | + | chr1.4:81948237-81948256 | None:intergenic | 30.0% |
| ! | GAATTCTTGTTTGAATCTTG+CGG | - | chr1.4:81946802-81946821 | MS.gene71595:CDS | 30.0% |
| ! | TTTGTTATATGCGTTTCTCT+AGG | - | chr1.4:81946483-81946502 | MS.gene71595:CDS | 30.0% |
| !! | AATTTGTGTCACTTTCAGTT+GGG | - | chr1.4:81947631-81947650 | MS.gene71595:CDS | 30.0% |
| !! | GTTCCTATTTTTCAGATCTA+AGG | - | chr1.4:81946538-81946557 | MS.gene71595:CDS | 30.0% |
| !! | TAATTTGTGTCACTTTCAGT+TGG | - | chr1.4:81947630-81947649 | MS.gene71595:CDS | 30.0% |
| !!! | TTTTTGGTTTTCAATGCTGT+TGG | - | chr1.4:81947723-81947742 | MS.gene71595:CDS | 30.0% |
| AAGCTATCTATGACATCTGT+AGG | - | chr1.4:81947940-81947959 | MS.gene71595:intron | 35.0% | |
| ACATACTGGTATAATGACCA+CGG | + | chr1.4:81947539-81947558 | None:intergenic | 35.0% | |
| ATGGAAAGAAATCCAAGCTT+GGG | - | chr1.4:81947802-81947821 | MS.gene71595:intron | 35.0% | |
| CATTGAAAACCAAAAACCCT+TGG | + | chr1.4:81947719-81947738 | None:intergenic | 35.0% | |
| GATTTCAAACTCAACAAGTG+TGG | - | chr1.4:81948570-81948589 | MS.gene71595:intron | 35.0% | |
| TATGGAAAGAAATCCAAGCT+TGG | - | chr1.4:81947801-81947820 | MS.gene71595:intron | 35.0% | |
| ! | AGAAAGCATGAAATGGATTC+TGG | + | chr1.4:81948230-81948249 | None:intergenic | 35.0% |
| ! | GAAAGCATGAAATGGATTCT+GGG | + | chr1.4:81948229-81948248 | None:intergenic | 35.0% |
| ! | TTTTGAGCCATCATCTATGA+TGG | - | chr1.4:81948324-81948343 | MS.gene71595:intron | 35.0% |
| !! | ATGAAATGGATTCTGGGATA+TGG | + | chr1.4:81948223-81948242 | None:intergenic | 35.0% |
| !! | TGAAATGGATTCTGGGATAT+GGG | + | chr1.4:81948222-81948241 | None:intergenic | 35.0% |
| AAACCTCAAAGAAGCAGTCA+AGG | + | chr1.4:81948152-81948171 | None:intergenic | 40.0% | |
| AGAAACAAGACGGTTAAGGT+TGG | + | chr1.4:81947997-81948016 | None:intergenic | 40.0% | |
| AGAGATCGTTGATCTGTGTT+TGG | - | chr1.4:81947656-81947675 | MS.gene71595:CDS | 40.0% | |
| AGATCTACAAAAACAGCACG+AGG | + | chr1.4:81947414-81947433 | None:intergenic | 40.0% | |
| ATACCACACTTGAAACCAGT+AGG | + | chr1.4:81948484-81948503 | None:intergenic | 40.0% | |
| ATAGACAGTAAACCCAAGCT+TGG | + | chr1.4:81947817-81947836 | None:intergenic | 40.0% | |
| CACTTAGCCATCATAGATGA+TGG | + | chr1.4:81948334-81948353 | None:intergenic | 40.0% | |
| CATACTGGTATAATGACCAC+GGG | + | chr1.4:81947538-81947557 | None:intergenic | 40.0% | |
| GAGTGCATTTCAGTTCACAT+CGG | - | chr1.4:81946348-81946367 | MS.gene71595:CDS | 40.0% | |
| GATCTACAAAAACAGCACGA+GGG | + | chr1.4:81947413-81947432 | None:intergenic | 40.0% | |
| GCATTTGTTCACTGGTATGT+GGG | - | chr1.4:81948646-81948665 | MS.gene71595:intron | 40.0% | |
| GTTGTGAGTTAGAGACATAC+TGG | + | chr1.4:81947553-81947572 | None:intergenic | 40.0% | |
| TACCACACTTGAAACCAGTA+GGG | + | chr1.4:81948483-81948502 | None:intergenic | 40.0% | |
| TAGCTACCTGAGAAACAAGA+CGG | + | chr1.4:81948007-81948026 | None:intergenic | 40.0% | |
| TATCAGCAAGCTTTCTGATG+CGG | + | chr1.4:81947683-81947702 | None:intergenic | 40.0% | |
| TCCAGTTATATCTGCTGAGA+AGG | - | chr1.4:81948258-81948277 | MS.gene71595:intron | 40.0% | |
| TCGCTACAATCAAAACCAAG+AGG | - | chr1.4:81948434-81948453 | MS.gene71595:intron | 40.0% | |
| TGCATTTGTTCACTGGTATG+TGG | - | chr1.4:81948645-81948664 | MS.gene71595:intron | 40.0% | |
| TTCTTATATGCACAGCCTGA+TGG | - | chr1.4:81947303-81947322 | MS.gene71595:CDS | 40.0% | |
| !! | ACTGCTTCTTTGAGGTTTGA+TGG | - | chr1.4:81948154-81948173 | MS.gene71595:intron | 40.0% |
| !! | TTGGTTTTCAATGCTGTTGG+AGG | - | chr1.4:81947726-81947745 | MS.gene71595:CDS | 40.0% |
| AAACTCAACAAGTGTGGCTG+AGG | - | chr1.4:81948576-81948595 | MS.gene71595:intron | 45.0% | |
| AACATCAGTGTGCTCCAAGA+GGG | + | chr1.4:81947901-81947920 | None:intergenic | 45.0% | |
| AATCAACAGACAGACGCTCA+AGG | + | chr1.4:81947782-81947801 | None:intergenic | 45.0% | |
| ACAGCAGCATTCACATCCTT+GGG | + | chr1.4:81948415-81948434 | None:intergenic | 45.0% | |
| AGCAAGCCATGTACTTTCCA+TGG | + | chr1.4:81948366-81948385 | None:intergenic | 45.0% | |
| AGCATTTCCGACCTGAATAC+CGG | + | chr1.4:81946379-81946398 | None:intergenic | 45.0% | |
| CAAGAGGACCATTCAGTTTG+TGG | - | chr1.4:81948450-81948469 | MS.gene71595:intron | 45.0% | |
| CACAAACTGAATGGTCCTCT+TGG | + | chr1.4:81948452-81948471 | None:intergenic | 45.0% | |
| CATCCTTGACTGCTTCTTTG+AGG | - | chr1.4:81948146-81948165 | MS.gene71595:intron | 45.0% | |
| CCTGAGAAACAAGACGGTTA+AGG | + | chr1.4:81948001-81948020 | None:intergenic | 45.0% | |
| CTCACCTCATCGATAACAGT+GGG | + | chr1.4:81947441-81947460 | None:intergenic | 45.0% | |
| GACTGAATTCCAGACCAACT+TGG | - | chr1.4:81948195-81948214 | MS.gene71595:intron | 45.0% | |
| GAGCTTTACTGTCTCGAACA+CGG | - | chr1.4:81946405-81946424 | MS.gene71595:CDS | 45.0% | |
| GCACCAATCCACAAACTGAA+TGG | + | chr1.4:81948461-81948480 | None:intergenic | 45.0% | |
| GCCTTCTCAGCAGATATAAC+TGG | + | chr1.4:81948262-81948281 | None:intergenic | 45.0% | |
| GGACCATTCAGTTTGTGGAT+TGG | - | chr1.4:81948455-81948474 | MS.gene71595:intron | 45.0% | |
| GTTGTATGGCTCAACAACAG+AGG | + | chr1.4:81947859-81947878 | None:intergenic | 45.0% | |
| TGACCTTGCTAAGGTACAGA+GGG | - | chr1.4:81948537-81948556 | MS.gene71595:intron | 45.0% | |
| ! | ATAACTGCACTGGTCTCCAA+GGG | - | chr1.4:81947700-81947719 | MS.gene71595:CDS | 45.0% |
| ! | CACTGATGTTGCTGTTCTTC+TGG | - | chr1.4:81947911-81947930 | MS.gene71595:intron | 45.0% |
| ! | GAGCGTCTGTCTGTTGATTA+TGG | - | chr1.4:81947783-81947802 | MS.gene71595:CDS | 45.0% |
| ! | GTTTTCAATGCTGTTGGAGG+AGG | - | chr1.4:81947729-81947748 | MS.gene71595:CDS | 45.0% |
| !! | AAGCTTGCTGATAACTGCAC+TGG | - | chr1.4:81947690-81947709 | MS.gene71595:CDS | 45.0% |
| !! | ACGGTTAAGGTTGGTGTAAG+TGG | + | chr1.4:81947988-81948007 | None:intergenic | 45.0% |
| !! | CCTTAACCGTCTTGTTTCTC+AGG | - | chr1.4:81947998-81948017 | MS.gene71595:intron | 45.0% |
| !! | CGGTTAAGGTTGGTGTAAGT+GGG | + | chr1.4:81947987-81948006 | None:intergenic | 45.0% |
| !! | GGATCTTGCTGCTTTGGAAA+AGG | - | chr1.4:81948708-81948727 | MS.gene71595:CDS | 45.0% |
| !! | TGATGGCTCAAAAGCACTGT+TGG | + | chr1.4:81948317-81948336 | None:intergenic | 45.0% |
| AACACCTTCTTCAGCGAGAC+TGG | - | chr1.4:81947372-81947391 | MS.gene71595:CDS | 50.0% | |
| AACAGAGGTGGAAACCTGAG+GGG | + | chr1.4:81947844-81947863 | None:intergenic | 50.0% | |
| AATGCTGTTGGAGGAGGAAC+TGG | - | chr1.4:81947735-81947754 | MS.gene71595:CDS | 50.0% | |
| ACAACAGAGGTGGAAACCTG+AGG | + | chr1.4:81947846-81947865 | None:intergenic | 50.0% | |
| AGTGACAAGACTGTTGGAGG+CGG | - | chr1.4:81947336-81947355 | MS.gene71595:CDS | 50.0% | |
| ATGACCACGGGCAAAGTTGT+TGG | + | chr1.4:81947526-81947545 | None:intergenic | 50.0% | |
| ATGCCGAGTGACAAGACTGT+TGG | - | chr1.4:81947330-81947349 | MS.gene71595:CDS | 50.0% | |
| CAACAGAGGTGGAAACCTGA+GGG | + | chr1.4:81947845-81947864 | None:intergenic | 50.0% | |
| CAACATCAGTGTGCTCCAAG+AGG | + | chr1.4:81947902-81947921 | None:intergenic | 50.0% | |
| CCAAGCGTGCATTTGTTCAC+TGG | - | chr1.4:81948638-81948657 | MS.gene71595:intron | 50.0% | |
| CCACTGTTATCGATGAGGTG+AGG | - | chr1.4:81947439-81947458 | MS.gene71595:CDS | 50.0% | |
| CCAGTGAACAAATGCACGCT+TGG | + | chr1.4:81948641-81948660 | None:intergenic | 50.0% | |
| CCATGTACTTTCCATGGCGA+GGG | + | chr1.4:81948360-81948379 | None:intergenic | 50.0% | |
| CCTCACCTCATCGATAACAG+TGG | + | chr1.4:81947442-81947461 | None:intergenic | 50.0% | |
| CCTTGGGAACAACATCACCT+CGG | + | chr1.4:81948399-81948418 | None:intergenic | 50.0% | |
| GACAGCAGCATTCACATCCT+TGG | + | chr1.4:81948416-81948435 | None:intergenic | 50.0% | |
| GTATGGCTCAACAACAGAGG+TGG | + | chr1.4:81947856-81947875 | None:intergenic | 50.0% | |
| GTGACCTTGCTAAGGTACAG+AGG | - | chr1.4:81948536-81948555 | MS.gene71595:intron | 50.0% | |
| GTGGAGAGGACACTGTTGTA+TGG | + | chr1.4:81947873-81947892 | None:intergenic | 50.0% | |
| GTTATCGATGAGGTGAGGAC+TGG | - | chr1.4:81947444-81947463 | MS.gene71595:CDS | 50.0% | |
| GTTCACTGGTATGTGGGTGA+GGG | - | chr1.4:81948652-81948671 | MS.gene71595:intron | 50.0% | |
| TACTGTCTCGAACACGGCAT+CGG | - | chr1.4:81946411-81946430 | MS.gene71595:CDS | 50.0% | |
| TCACCACCAGGAACAACAGT+AGG | + | chr1.4:81948520-81948539 | None:intergenic | 50.0% | |
| TCAGGTCGGAAATGCTTGCT+GGG | - | chr1.4:81946383-81946402 | MS.gene71595:CDS | 50.0% | |
| TCAGTTCACATCGGTCAAGC+CGG | - | chr1.4:81946357-81946376 | MS.gene71595:CDS | 50.0% | |
| TGAGCCCACTGTTATCGATG+AGG | - | chr1.4:81947434-81947453 | MS.gene71595:CDS | 50.0% | |
| TGAGGGCGGTGATGAAGATA+TGG | - | chr1.4:81948759-81948778 | MS.gene71595:CDS | 50.0% | |
| TGTTCACTGGTATGTGGGTG+AGG | - | chr1.4:81948651-81948670 | MS.gene71595:intron | 50.0% | |
| TTCAGGTCGGAAATGCTTGC+TGG | - | chr1.4:81946382-81946401 | MS.gene71595:CDS | 50.0% | |
| ! | ACAAGTGTGGCTGAGGTGTT+TGG | - | chr1.4:81948583-81948602 | MS.gene71595:intron | 50.0% |
| ! | CAGTCTTGTCACTCGGCATT+TGG | + | chr1.4:81947329-81947348 | None:intergenic | 50.0% |
| ! | CCTCCAACAGTCTTGTCACT+CGG | + | chr1.4:81947336-81947355 | None:intergenic | 50.0% |
| ! | GATAACTGCACTGGTCTCCA+AGG | - | chr1.4:81947699-81947718 | MS.gene71595:CDS | 50.0% |
| ! | TCTGGGATATGGGACCAAGT+TGG | + | chr1.4:81948212-81948231 | None:intergenic | 50.0% |
| !! | CACTGGTCTCCAAGGGTTTT+TGG | - | chr1.4:81947707-81947726 | MS.gene71595:CDS | 50.0% |
| !! | GATATGGGACCAAGTTGGTC+TGG | + | chr1.4:81948207-81948226 | None:intergenic | 50.0% |
| !! | GCTTGCTGTTTGATGTACCG+AGG | - | chr1.4:81948379-81948398 | MS.gene71595:intron | 50.0% |
| !! | TGCCCTACTGGTTTCAAGTG+TGG | - | chr1.4:81948478-81948497 | MS.gene71595:intron | 50.0% |
| !! | TTTGTGGATTGGTGCCCTAC+TGG | - | chr1.4:81948466-81948485 | MS.gene71595:intron | 50.0% |
| AAGTGGGACGCTCAATGTCG+AGG | + | chr1.4:81947971-81947990 | None:intergenic | 55.0% | |
| ACCACGGGCAAAGTTGTTGG+CGG | + | chr1.4:81947523-81947542 | None:intergenic | 55.0% | |
| ACCTTAGCAAGGTCACCACC+AGG | + | chr1.4:81948532-81948551 | None:intergenic | 55.0% | |
| AGCACCAGTCTCGCTGAAGA+AGG | + | chr1.4:81947379-81947398 | None:intergenic | 55.0% | |
| AGGATGGAAGAGCTGGCGAT+AGG | + | chr1.4:81947472-81947491 | None:intergenic | 55.0% | |
| AGTGGGACGCTCAATGTCGA+GGG | + | chr1.4:81947970-81947989 | None:intergenic | 55.0% | |
| AGTGTGCTCCAAGAGGGAGT+GGG | + | chr1.4:81947895-81947914 | None:intergenic | 55.0% | |
| CAAAGCAGCAAGATCCTCGC+GGG | + | chr1.4:81948704-81948723 | None:intergenic | 55.0% | |
| CACTGATGAGCTGCTCAGGA+TGG | + | chr1.4:81947488-81947507 | None:intergenic | 55.0% | |
| CAGCCACCTACTGTTGTTCC+TGG | - | chr1.4:81948511-81948530 | MS.gene71595:intron | 55.0% | |
| CATCCTGAGCAGCTCATCAG+TGG | - | chr1.4:81947486-81947505 | MS.gene71595:intron | 55.0% | |
| CATCGGTCAAGCCGGTATTC+AGG | - | chr1.4:81946365-81946384 | MS.gene71595:CDS | 55.0% | |
| CCAAAGCAGCAAGATCCTCG+CGG | + | chr1.4:81948705-81948724 | None:intergenic | 55.0% | |
| CCACCAGGAACAACAGTAGG+TGG | + | chr1.4:81948517-81948536 | None:intergenic | 55.0% | |
| CCACCTACTGTTGTTCCTGG+TGG | - | chr1.4:81948514-81948533 | MS.gene71595:intron | 55.0% | |
| CCGAGGTGATGTTGTTCCCA+AGG | - | chr1.4:81948396-81948415 | MS.gene71595:intron | 55.0% | |
| CCGAGTGACAAGACTGTTGG+AGG | - | chr1.4:81947333-81947352 | MS.gene71595:CDS | 55.0% | |
| CTGCCCTCTGTACCTTAGCA+AGG | + | chr1.4:81948543-81948562 | None:intergenic | 55.0% | |
| CTGGTATGTGGGTGAGGGTA+TGG | - | chr1.4:81948657-81948676 | MS.gene71595:intron | 55.0% | |
| GCCATGTACTTTCCATGGCG+AGG | + | chr1.4:81948361-81948380 | None:intergenic | 55.0% | |
| GGTCAAGCCGGTATTCAGGT+CGG | - | chr1.4:81946369-81946388 | MS.gene71595:CDS | 55.0% | |
| TACTGTCTATCCCTCCCCTC+AGG | - | chr1.4:81947827-81947846 | MS.gene71595:intron | 55.0% | |
| TCACTCGGCATTTGGCCATC+AGG | + | chr1.4:81947321-81947340 | None:intergenic | 55.0% | |
| TTCTTCAGCGAGACTGGTGC+TGG | - | chr1.4:81947378-81947397 | MS.gene71595:CDS | 55.0% | |
| TTGCCACTGATGAGCTGCTC+AGG | + | chr1.4:81947492-81947511 | None:intergenic | 55.0% | |
| ! | AGAATTTTCCGAAGCCCGCG+AGG | - | chr1.4:81948687-81948706 | MS.gene71595:intron | 55.0% |
| ! | CCCTCGCCATGGAAAGTACA+TGG | - | chr1.4:81948357-81948376 | MS.gene71595:intron | 55.0% |
| ! | GTGGGTGAGGGTATGGAAGA+AGG | - | chr1.4:81948664-81948683 | MS.gene71595:intron | 55.0% |
| ! | GTTGGAGGAGGAACTGGTTC+TGG | - | chr1.4:81947741-81947760 | MS.gene71595:CDS | 55.0% |
| ! | TCCTGGTGGTGACCTTGCTA+AGG | - | chr1.4:81948528-81948547 | MS.gene71595:intron | 55.0% |
| !! | GAAGAAGTTGGTGCCGAGTC+TGG | - | chr1.4:81948736-81948755 | MS.gene71595:CDS | 55.0% |
| !! | GGAGGAACTGGTTCTGGTCT+TGG | - | chr1.4:81947747-81947766 | MS.gene71595:CDS | 55.0% |
| AGAGGTGGAAACCTGAGGGG+AGG | + | chr1.4:81947841-81947860 | None:intergenic | 60.0% | |
| AGCAAGATCCTCGCGGGCTT+CGG | + | chr1.4:81948698-81948717 | None:intergenic | 60.0% | |
| ATCACCGCCCTCACCAGACT+CGG | + | chr1.4:81948752-81948771 | None:intergenic | 60.0% | |
| CAGTGTGCTCCAAGAGGGAG+TGG | + | chr1.4:81947896-81947915 | None:intergenic | 60.0% | |
| GAGGTGGAAACCTGAGGGGA+GGG | + | chr1.4:81947840-81947859 | None:intergenic | 60.0% | |
| GCTAAGTGTGACCCTCGCCA+TGG | - | chr1.4:81948346-81948365 | MS.gene71595:intron | 60.0% | |
| GCTGCTCAGGATGGAAGAGC+TGG | + | chr1.4:81947479-81947498 | None:intergenic | 60.0% | |
| ! | CCGCGAGGATCTTGCTGCTT+TGG | - | chr1.4:81948702-81948721 | MS.gene71595:CDS | 60.0% |
| !! | AGTTGGTGCCGAGTCTGGTG+AGG | - | chr1.4:81948741-81948760 | MS.gene71595:CDS | 60.0% |
| !! | GTTGGTGCCGAGTCTGGTGA+GGG | - | chr1.4:81948742-81948761 | MS.gene71595:CDS | 60.0% |
| CCAAGAGGGAGTGGGTGGAG+AGG | + | chr1.4:81947887-81947906 | None:intergenic | 65.0% | |
| CCTCTCCACCCACTCCCTCT+TGG | - | chr1.4:81947884-81947903 | MS.gene71595:intron | 65.0% | |
| GCCGCCAACAACTTTGCCCG+TGG | - | chr1.4:81947519-81947538 | MS.gene71595:intron | 65.0% | |
| GTGCTCCAAGAGGGAGTGGG+TGG | + | chr1.4:81947892-81947911 | None:intergenic | 65.0% | |
| ! | GGTGCCGAGTCTGGTGAGGG+CGG | - | chr1.4:81948745-81948764 | MS.gene71595:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 81946342 | 81948792 | 81946342 | ID=MS.gene71595 |
| chr1.4 | mRNA | 81946342 | 81948792 | 81946342 | ID=MS.gene71595.t1;Parent=MS.gene71595 |
| chr1.4 | exon | 81948700 | 81948792 | 81948700 | ID=MS.gene71595.t1.exon1;Parent=MS.gene71595.t1 |
| chr1.4 | CDS | 81948700 | 81948792 | 81948700 | ID=cds.MS.gene71595.t1;Parent=MS.gene71595.t1 |
| chr1.4 | exon | 81947582 | 81947816 | 81947582 | ID=MS.gene71595.t1.exon2;Parent=MS.gene71595.t1 |
| chr1.4 | CDS | 81947582 | 81947816 | 81947582 | ID=cds.MS.gene71595.t1;Parent=MS.gene71595.t1 |
| chr1.4 | exon | 81947115 | 81947485 | 81947115 | ID=MS.gene71595.t1.exon3;Parent=MS.gene71595.t1 |
| chr1.4 | CDS | 81947115 | 81947485 | 81947115 | ID=cds.MS.gene71595.t1;Parent=MS.gene71595.t1 |
| chr1.4 | exon | 81946342 | 81946995 | 81946342 | ID=MS.gene71595.t1.exon4;Parent=MS.gene71595.t1 |
| chr1.4 | CDS | 81946342 | 81946995 | 81946342 | ID=cds.MS.gene71595.t1;Parent=MS.gene71595.t1 |
| Gene Sequence |
| Protein sequence |
