Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71771.t1 | XP_013470142.1 | 97.6 | 710 | 17 | 0 | 1 | 710 | 127 | 836 | 0.00E+00 | 1436 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71771.t1 | F4I1S7 | 63.1 | 719 | 243 | 12 | 1 | 707 | 127 | 835 | 8.1e-267 | 921.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71771.t1 | A0A072W1L5 | 97.6 | 710 | 17 | 0 | 1 | 710 | 127 | 836 | 0.0e+00 | 1436.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049190 | MS.gene71771 | 0.888965 | 3.70E-73 | -1.69E-46 |
| MS.gene049341 | MS.gene71771 | 0.808593 | 2.87E-50 | -1.69E-46 |
| MS.gene050020 | MS.gene71771 | 0.817491 | 3.21E-52 | -1.69E-46 |
| MS.gene050324 | MS.gene71771 | 0.805051 | 1.61E-49 | -1.69E-46 |
| MS.gene050630 | MS.gene71771 | 0.814783 | 1.29E-51 | -1.69E-46 |
| MS.gene052612 | MS.gene71771 | 0.800535 | 1.38E-48 | -1.69E-46 |
| MS.gene052879 | MS.gene71771 | 0.808873 | 2.50E-50 | -1.69E-46 |
| MS.gene052880 | MS.gene71771 | 0.803095 | 4.11E-49 | -1.69E-46 |
| MS.gene055512 | MS.gene71771 | 0.812438 | 4.24E-51 | -1.69E-46 |
| MS.gene055890 | MS.gene71771 | 0.816609 | 5.06E-52 | -1.69E-46 |
| MS.gene056228 | MS.gene71771 | 0.828247 | 1.00E-54 | -1.69E-46 |
| MS.gene05638 | MS.gene71771 | 0.818589 | 1.81E-52 | -1.69E-46 |
| MS.gene056553 | MS.gene71771 | 0.807316 | 5.37E-50 | -1.69E-46 |
| MS.gene059154 | MS.gene71771 | 0.835546 | 1.58E-56 | -1.69E-46 |
| MS.gene05978 | MS.gene71771 | 0.802624 | 5.14E-49 | -1.69E-46 |
| MS.gene060194 | MS.gene71771 | 0.825155 | 5.47E-54 | -1.69E-46 |
| MS.gene060587 | MS.gene71771 | 0.825199 | 5.34E-54 | -1.69E-46 |
| MS.gene061176 | MS.gene71771 | 0.810239 | 1.27E-50 | -1.69E-46 |
| MS.gene061177 | MS.gene71771 | 0.80948 | 1.85E-50 | -1.69E-46 |
| MS.gene061178 | MS.gene71771 | 0.81003 | 1.41E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71771.t1 | MTR_1g109490 | 97.606 | 710 | 17 | 0 | 1 | 710 | 127 | 836 | 0.0 | 1433 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71771.t1 | AT1G49540 | 63.143 | 719 | 243 | 12 | 1 | 707 | 127 | 835 | 0.0 | 917 |
| MS.gene71771.t1 | AT1G49540 | 63.143 | 719 | 243 | 12 | 1 | 707 | 129 | 837 | 0.0 | 917 |
Find 189 sgRNAs with CRISPR-Local
Find 380 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGACAAACATCCAGATTT+TGG | 0.080849 | 1.1:-78075105 | MS.gene71771:CDS |
| CAGATGGTACTGTTTGTATA+TGG | 0.208305 | 1.1:-78077241 | MS.gene71771:CDS |
| ACCTCTCCATTGATGCTTAC+AGG | 0.211910 | 1.1:+78076756 | None:intergenic |
| AACTAACCTTGGGCATAAAT+AGG | 0.234409 | 1.1:+78075047 | None:intergenic |
| AAGACAAATGCATACGAATT+TGG | 0.242871 | 1.1:-78076704 | MS.gene71771:CDS |
| ATGGTGGATCGTTCCATCTT+TGG | 0.278484 | 1.1:-78076290 | MS.gene71771:CDS |
| GTACATTCATGTGAGCTAAA+AGG | 0.291991 | 1.1:-78076816 | MS.gene71771:CDS |
| GCTAAAATTGAATCTCCATT+TGG | 0.295581 | 1.1:+78076321 | None:intergenic |
| ACAGACTCCACAACTCTATT+TGG | 0.297076 | 1.1:+78072300 | None:intergenic |
| TCCAATCAAAAGAGATTCTA+AGG | 0.303182 | 1.1:+78076560 | None:intergenic |
| CCATAGAGTTTATGTGATTC+AGG | 0.311737 | 1.1:+78073705 | None:intergenic |
| TACAGATTGGATCCGGAGTT+TGG | 0.311793 | 1.1:-78076790 | MS.gene71771:CDS |
| TCCATCCTCTTGTCTGTTAT+AGG | 0.312730 | 1.1:+78072277 | None:intergenic |
| TTCTTTATGCTGTGATCATA+AGG | 0.318251 | 1.1:-78073664 | MS.gene71771:CDS |
| ACATATTTGCACCCAAAATC+TGG | 0.321358 | 1.1:+78075093 | None:intergenic |
| GGATTATCTGGTCATGTTCT+TGG | 0.328711 | 1.1:-78072517 | MS.gene71771:CDS |
| TTCCGTTGGTTCTAAATCTA+TGG | 0.332083 | 1.1:-78077064 | MS.gene71771:CDS |
| CACTGTGCTCTGGGATTCTA+TGG | 0.332419 | 1.1:-78076357 | MS.gene71771:CDS |
| GCGACAAGACAGTGAAAATC+TGG | 0.332615 | 1.1:-78072460 | MS.gene71771:CDS |
| AATGCTTTGTGGTTGATAAC+AGG | 0.332640 | 1.1:+78076473 | None:intergenic |
| TGGCGACAAAGATACCTTTC+CGG | 0.344773 | 1.1:+78076942 | None:intergenic |
| GTAGAGGCATGACATATAAA+AGG | 0.354208 | 1.1:+78072206 | None:intergenic |
| ACATGAGGATTGGGTATATT+CGG | 0.356150 | 1.1:-78076538 | MS.gene71771:CDS |
| GGCTTTGGCAGGTTGGTTCA+TGG | 0.357324 | 1.1:-78073290 | MS.gene71771:CDS |
| ATTCCATCATTTCTTCGATT+GGG | 0.357838 | 1.1:+78072347 | None:intergenic |
| GCTGTCACACTACTCGTAAA+TGG | 0.364831 | 1.1:+78072389 | None:intergenic |
| TGGCAGCCTGAAAAGACTTC+TGG | 0.377252 | 1.1:-78076417 | MS.gene71771:CDS |
| CCTGAATCACATAAACTCTA+TGG | 0.383126 | 1.1:-78073705 | MS.gene71771:CDS |
| GTGAACCTGTTGCAAATTCA+TGG | 0.386968 | 1.1:+78072483 | None:intergenic |
| GCTTGTTGCTTCTTCATGTA+AGG | 0.391628 | 1.1:-78073637 | MS.gene71771:intron |
| CTACTGCTGTGGCAGAAGTA+TGG | 0.394606 | 1.1:-78073311 | MS.gene71771:CDS |
| TATGACAGTTGTTCATAGTA+AGG | 0.395282 | 1.1:-78075249 | MS.gene71771:CDS |
| CTAAAATTGAATCTCCATTT+GGG | 0.396876 | 1.1:+78076322 | None:intergenic |
| CGAACTAAGCCACTGTGCTC+TGG | 0.400762 | 1.1:-78076367 | MS.gene71771:CDS |
| TTCTGCCACAGCAGTAGATT+GGG | 0.401219 | 1.1:+78073317 | None:intergenic |
| TACATTCATGTGAGCTAAAA+GGG | 0.406622 | 1.1:-78076815 | MS.gene71771:CDS |
| AATTCCATCATTTCTTCGAT+TGG | 0.407892 | 1.1:+78072346 | None:intergenic |
| ACCTCCAATTGAAGATCAAC+TGG | 0.411643 | 1.1:-78073745 | MS.gene71771:CDS |
| TCTGATACAAATGGGGTTGA+TGG | 0.415325 | 1.1:-78073819 | MS.gene71771:CDS |
| CTTCTGCCACAGCAGTAGAT+TGG | 0.418879 | 1.1:+78073316 | None:intergenic |
| ATTGCGCGGCCTCAGGTTCA+TGG | 0.422152 | 1.1:-78075287 | MS.gene71771:CDS |
| TGGGATTCTATGGTGGTCAT+TGG | 0.423535 | 1.1:-78076347 | MS.gene71771:CDS |
| TTATAGTCTTCTTGCGAGGC+AGG | 0.424206 | 1.1:-78072552 | MS.gene71771:CDS |
| TCTTTATGCTGTGATCATAA+GGG | 0.426565 | 1.1:-78073663 | MS.gene71771:CDS |
| TTATCGATGGCGGAATTGCC+TGG | 0.427069 | 1.1:-78077036 | MS.gene71771:CDS |
| GAAGAGCCAGCCACAAGGAC+AGG | 0.427978 | 1.1:+78076597 | None:intergenic |
| TCATTACCTGTAAGCATCAA+TGG | 0.428341 | 1.1:-78076762 | MS.gene71771:CDS |
| GTATGAGATTGCGCGGCCTC+AGG | 0.431270 | 1.1:-78075294 | MS.gene71771:CDS |
| AGCTAAAAGGGCATACAGAT+TGG | 0.432748 | 1.1:-78076803 | MS.gene71771:CDS |
| TACAAATGGGGTTGATGGTC+TGG | 0.434125 | 1.1:-78073814 | MS.gene71771:CDS |
| GAAGTATGGCTTTGGCAGGT+TGG | 0.434435 | 1.1:-78073297 | MS.gene71771:CDS |
| AAGGACAGGACCTTCTATAT+AGG | 0.435333 | 1.1:+78076611 | None:intergenic |
| AACTGGCATGGCACACACTT+TGG | 0.435584 | 1.1:-78073728 | MS.gene71771:CDS |
| TTTGATTGGACATGAGGATT+GGG | 0.435859 | 1.1:-78076547 | MS.gene71771:CDS |
| CATGAGACCTCTGATACAAA+TGG | 0.436275 | 1.1:-78073828 | MS.gene71771:CDS |
| CTGTATATGCCATTCCCGTT+TGG | 0.438205 | 1.1:+78076657 | None:intergenic |
| GAAGGTCCTGTCCTTGTGGC+TGG | 0.439711 | 1.1:-78076603 | MS.gene71771:CDS |
| AGGGACACAAGCGGATTATC+TGG | 0.442277 | 1.1:-78072529 | MS.gene71771:CDS |
| ATGAGACCTCTGATACAAAT+GGG | 0.444909 | 1.1:-78073827 | MS.gene71771:CDS |
| CACGGCCATGAATTTGCAAC+AGG | 0.445611 | 1.1:-78072488 | MS.gene71771:CDS |
| AGATGGTACTGTTTGTATAT+GGG | 0.448027 | 1.1:-78077240 | MS.gene71771:CDS |
| CAAACGGGAATGGCATATAC+AGG | 0.452267 | 1.1:-78076656 | MS.gene71771:CDS |
| CGTCCTTGCAATGGGAGGAT+TGG | 0.455070 | 1.1:-78076998 | MS.gene71771:CDS |
| AACACAGTTGGAACTGCGTC+GGG | 0.458249 | 1.1:+78073774 | None:intergenic |
| ATTGGGTATATTCGGTTGAA+TGG | 0.458591 | 1.1:-78076530 | MS.gene71771:CDS |
| GGTGGTCATTGGAGCCCAAA+TGG | 0.468423 | 1.1:-78076336 | MS.gene71771:CDS |
| GGTGCAAATATGTCAGCTCT+TGG | 0.475040 | 1.1:-78075083 | MS.gene71771:CDS |
| GTGTTTACAATCACAACAAC+AGG | 0.476242 | 1.1:-78073162 | MS.gene71771:intron |
| CTCCCCAATCGAAGAAATGA+TGG | 0.478352 | 1.1:-78072350 | MS.gene71771:CDS |
| TACGTAGCTCCGTGCCAAAC+GGG | 0.479132 | 1.1:-78076671 | MS.gene71771:CDS |
| AGGCAATTCCGCCATCGATA+AGG | 0.479680 | 1.1:+78077038 | None:intergenic |
| TGACAACTGGCTTACACAAA+AGG | 0.480622 | 1.1:-78076253 | MS.gene71771:CDS |
| CATGCCAGTTGATCTTCAAT+TGG | 0.481967 | 1.1:+78073741 | None:intergenic |
| GATATAGCATGGGCTAGATC+TGG | 0.482923 | 1.1:-78076201 | MS.gene71771:CDS |
| TGGACAAGACTATGATGATC+TGG | 0.487149 | 1.1:-78076437 | MS.gene71771:CDS |
| CTTCCGTGGATGCAACCAAA+GGG | 0.488239 | 1.1:+78076502 | None:intergenic |
| AGAGAAACCTCGACTTTCCA+TGG | 0.491446 | 1.1:+78075335 | None:intergenic |
| AATTATGGTTTCTCAAACTG+AGG | 0.493661 | 1.1:-78077285 | None:intergenic |
| GGATGGAAGCATTGTAGTAC+CGG | 0.495177 | 1.1:-78072261 | MS.gene71771:CDS |
| ACAAGATTCACCTTTACTGC+GGG | 0.496063 | 1.1:-78076972 | MS.gene71771:CDS |
| CTGTGTCACTGTTAAGCTAT+GGG | 0.496668 | 1.1:+78073245 | None:intergenic |
| CAACTAGAATTTATGCTCCA+TGG | 0.497145 | 1.1:-78075352 | MS.gene71771:CDS |
| TGATGAAGATTTCTTCTCTA+CGG | 0.497228 | 1.1:+78072436 | None:intergenic |
| TTACGTAGCTCCGTGCCAAA+CGG | 0.497618 | 1.1:-78076672 | MS.gene71771:CDS |
| CTAGCTGTTGGAATGGAAAA+CGG | 0.499403 | 1.1:-78072323 | MS.gene71771:CDS |
| GTAGTGTGACAGCATTGTCT+TGG | 0.501252 | 1.1:-78072379 | MS.gene71771:CDS |
| AGCTTATCATCCTATATAGA+AGG | 0.501427 | 1.1:-78076621 | MS.gene71771:CDS |
| TGATTGTAAACACAGAGAAC+TGG | 0.501451 | 1.1:+78073172 | None:intergenic |
| CTGTCATACAATTTATATCA+TGG | 0.501729 | 1.1:+78075264 | None:intergenic |
| TCTGTGTCACTGTTAAGCTA+TGG | 0.504079 | 1.1:+78073244 | None:intergenic |
| CTCTTCAAGATGGAGAGTCT+TGG | 0.504927 | 1.1:-78075316 | MS.gene71771:CDS |
| GGTCAAATCGTCCTTGCAAT+GGG | 0.506094 | 1.1:-78077006 | MS.gene71771:CDS |
| GCCAGTTGATCTTCAATTGG+AGG | 0.508620 | 1.1:+78073744 | None:intergenic |
| AAGACTATAACTAATTTCAC+TGG | 0.509024 | 1.1:+78072565 | None:intergenic |
| GTCGAGGTTTCTCTTCAAGA+TGG | 0.509924 | 1.1:-78075326 | MS.gene71771:CDS |
| AAAATGTTGGTGATGACAAC+TGG | 0.510399 | 1.1:-78076266 | MS.gene71771:CDS |
| CTGTGGCAGAAGTATGGCTT+TGG | 0.512071 | 1.1:-78073305 | MS.gene71771:CDS |
| TGACTGTAAATTATCATGCC+TGG | 0.515474 | 1.1:-78077094 | MS.gene71771:CDS |
| AATGATGGAATTCTAGCTGT+TGG | 0.518192 | 1.1:-78072335 | MS.gene71771:CDS |
| GGCAGAAGTATGGCTTTGGC+AGG | 0.518853 | 1.1:-78073301 | MS.gene71771:CDS |
| TAGTGTGACAGCATTGTCTT+GGG | 0.519272 | 1.1:-78072378 | MS.gene71771:CDS |
| TTTGCATCTACTTCTTCAGA+TGG | 0.519491 | 1.1:-78077257 | MS.gene71771:CDS |
| GAACTAAGCCACTGTGCTCT+GGG | 0.520247 | 1.1:-78076366 | MS.gene71771:CDS |
| AGCTCCGTGCCAAACGGGAA+TGG | 0.521165 | 1.1:-78076666 | MS.gene71771:CDS |
| CCTTTGGTTGCATCCACGGA+AGG | 0.522914 | 1.1:-78076501 | MS.gene71771:CDS |
| ATGACAGTTGTTCATAGTAA+GGG | 0.523352 | 1.1:-78075248 | MS.gene71771:CDS |
| ATAACAGGCTTCCCCTTCCG+TGG | 0.525346 | 1.1:+78076488 | None:intergenic |
| TTCCATCATTTCTTCGATTG+GGG | 0.526646 | 1.1:+78072348 | None:intergenic |
| AGTCTACAACTTGCTTCTTG+TGG | 0.530154 | 1.1:-78072140 | MS.gene71771:CDS |
| TGGTCAAATCGTCCTTGCAA+TGG | 0.532210 | 1.1:-78077007 | MS.gene71771:CDS |
| AAGGGCATACAGATTGGATC+CGG | 0.534028 | 1.1:-78076797 | MS.gene71771:CDS |
| TGCCTCTACAGTAAACCGTC+TGG | 0.535874 | 1.1:-78072192 | MS.gene71771:CDS |
| TTTGGTTGCATCCACGGAAG+GGG | 0.535971 | 1.1:-78076499 | MS.gene71771:CDS |
| TCACATAAACTCTATGGCCA+TGG | 0.537110 | 1.1:-78073699 | MS.gene71771:CDS |
| GTGACAGCATTGTCTTGGGT+TGG | 0.548956 | 1.1:-78072374 | MS.gene71771:CDS |
| GGAGGTTCAGTAAACACAGT+TGG | 0.549347 | 1.1:+78073762 | None:intergenic |
| GATGCAGATAAAATGCTTTG+TGG | 0.550954 | 1.1:+78076462 | None:intergenic |
| CTACAGTAAACCGTCTGGCA+TGG | 0.553191 | 1.1:-78072187 | MS.gene71771:CDS |
| CTTTGGTTGCATCCACGGAA+GGG | 0.553868 | 1.1:-78076500 | MS.gene71771:CDS |
| AGAAGAGCAGCGGCGAAACC+CGG | 0.555080 | 1.1:+78072242 | None:intergenic |
| CATCAGCTCCGCCAACAAAA+CGG | 0.556187 | 1.1:+78075219 | None:intergenic |
| CCTTCCGTGGATGCAACCAA+AGG | 0.557493 | 1.1:+78076501 | None:intergenic |
| CATCGGTGACTGATATAGCA+TGG | 0.557572 | 1.1:-78076212 | MS.gene71771:CDS |
| ATGCATACGAATTTGGAAGA+TGG | 0.561651 | 1.1:-78076697 | MS.gene71771:CDS |
| AAGAAAATAGCTCATTTCCA+TGG | 0.561954 | 1.1:+78073682 | None:intergenic |
| TATCCAATCCTCCCATTGCA+AGG | 0.562834 | 1.1:+78076995 | None:intergenic |
| GTTGGTTCATGGAAAGCAGT+TGG | 0.566583 | 1.1:-78073279 | MS.gene71771:CDS |
| TATGCCATTCCCGTTTGGCA+CGG | 0.567694 | 1.1:+78076662 | None:intergenic |
| TGCCAGACGGTTTACTGTAG+AGG | 0.573011 | 1.1:+78072190 | None:intergenic |
| TATAGAAGGTCCTGTCCTTG+TGG | 0.573054 | 1.1:-78076607 | MS.gene71771:CDS |
| CTTACACAAAAGGTTCCCTC+TGG | 0.573072 | 1.1:-78076243 | MS.gene71771:CDS |
| TGGAATTCTAGCTGTTGGAA+TGG | 0.578033 | 1.1:-78072330 | MS.gene71771:CDS |
| TACCATAGATTTAGAACCAA+CGG | 0.580301 | 1.1:+78077062 | None:intergenic |
| ATCAACCCCATTTGTATCAG+AGG | 0.580402 | 1.1:+78073821 | None:intergenic |
| CGACAAGACAGTGAAAATCT+GGG | 0.588108 | 1.1:-78072459 | MS.gene71771:CDS |
| AAACACAGTTGGAACTGCGT+CGG | 0.588864 | 1.1:+78073773 | None:intergenic |
| GATCATCATAGTCTTGTCCA+TGG | 0.589029 | 1.1:+78076440 | None:intergenic |
| TAGTCTTCTTGCGAGGCAGG+AGG | 0.589362 | 1.1:-78072549 | MS.gene71771:CDS |
| TGCGTCGGGAACAGTTTCAA+AGG | 0.592159 | 1.1:+78073788 | None:intergenic |
| ACGATTTGACCACTACATCC+AGG | 0.600975 | 1.1:+78077018 | None:intergenic |
| TCCTATAACAGACAAGAGGA+TGG | 0.602584 | 1.1:-78072278 | MS.gene71771:CDS |
| TGACAGTTGTTCATAGTAAG+GGG | 0.603153 | 1.1:-78075247 | MS.gene71771:CDS |
| TATATCAGCTAGCCATGACC+AGG | 0.603806 | 1.1:-78076169 | MS.gene71771:intron |
| TCTGGCATGGAGGAAAATTG+AGG | 0.604356 | 1.1:-78072174 | MS.gene71771:CDS |
| AGTCTTCTTGCGAGGCAGGA+GGG | 0.605997 | 1.1:-78072548 | MS.gene71771:CDS |
| ATCGGTGACTGATATAGCAT+GGG | 0.610638 | 1.1:-78076211 | MS.gene71771:CDS |
| ACCTGTAAGCATCAATGGAG+AGG | 0.613920 | 1.1:-78076757 | MS.gene71771:CDS |
| CGAGGCAGGAGGGACACAAG+CGG | 0.615848 | 1.1:-78072538 | MS.gene71771:CDS |
| TAGCTTAACAGTGACACAGA+TGG | 0.618590 | 1.1:-78073241 | MS.gene71771:CDS |
| TGGATGAATGTGGTTACTGT+TGG | 0.619332 | 1.1:-78076390 | MS.gene71771:CDS |
| GCGGAATTGCCTGGATGTAG+TGG | 0.621195 | 1.1:-78077027 | MS.gene71771:CDS |
| AAGAAGAAGAGCCAGCCACA+AGG | 0.621956 | 1.1:+78076592 | None:intergenic |
| AAGATTCACCTTTACTGCGG+GGG | 0.621967 | 1.1:-78076970 | MS.gene71771:CDS |
| TTATGCTCCATGGAAAGTCG+AGG | 0.623529 | 1.1:-78075342 | MS.gene71771:CDS |
| TCCGTGGATGCAACCAAAGG+GGG | 0.625596 | 1.1:+78076504 | None:intergenic |
| GTACTTCCACTGACGAGTAG+TGG | 0.627306 | 1.1:-78077212 | MS.gene71771:intron |
| GCAGGCCCAATCTACTGCTG+TGG | 0.627705 | 1.1:-78073322 | MS.gene71771:intron |
| CAATTGAAGATCAACTGGCA+TGG | 0.629052 | 1.1:-78073740 | MS.gene71771:CDS |
| TTAAGCTATGGGATTGCAAG+CGG | 0.629501 | 1.1:+78073256 | None:intergenic |
| CAAATCGTCCTTGCAATGGG+AGG | 0.631304 | 1.1:-78077003 | MS.gene71771:CDS |
| AACAAGATTCACCTTTACTG+CGG | 0.631780 | 1.1:-78076973 | MS.gene71771:CDS |
| ATCTATGGTAGCCTTATCGA+TGG | 0.631961 | 1.1:-78077049 | MS.gene71771:CDS |
| TGTGCTCTGGGATTCTATGG+TGG | 0.635038 | 1.1:-78076354 | MS.gene71771:CDS |
| ATAACAAGACTTCTGCAAAG+TGG | 0.637064 | 1.1:+78075139 | None:intergenic |
| GATGGAAGCATTGTAGTACC+GGG | 0.637075 | 1.1:-78072260 | MS.gene71771:CDS |
| GGCTTACCACTACTCGTCAG+TGG | 0.637295 | 1.1:+78077206 | None:intergenic |
| AAAACGGCCAAATAGAGTTG+TGG | 0.638326 | 1.1:-78072307 | MS.gene71771:CDS |
| AGTCTTGGTATGAGATTGCG+CGG | 0.641165 | 1.1:-78075301 | MS.gene71771:CDS |
| ACCGATGCAAAATGACCAGA+GGG | 0.642490 | 1.1:+78076228 | None:intergenic |
| GTTGCAAATTCATGGCCGTG+TGG | 0.643567 | 1.1:+78072491 | None:intergenic |
| CTGAAAAGACTTCTGGTGTG+TGG | 0.643767 | 1.1:-78076410 | MS.gene71771:CDS |
| TCATGTTCTTGGAACCCACA+CGG | 0.651148 | 1.1:-78072506 | MS.gene71771:CDS |
| ATATCATGGCCATGAACCTG+AGG | 0.654048 | 1.1:+78075278 | None:intergenic |
| TTGCAAATTCATGGCCGTGT+GGG | 0.657111 | 1.1:+78072492 | None:intergenic |
| CAGTAAACCGTCTGGCATGG+AGG | 0.660516 | 1.1:-78072184 | MS.gene71771:CDS |
| TTCCGTGGATGCAACCAAAG+GGG | 0.666647 | 1.1:+78076503 | None:intergenic |
| TCTGTCCTATAACAGACAAG+AGG | 0.667351 | 1.1:-78072282 | MS.gene71771:CDS |
| CACCGATGCAAAATGACCAG+AGG | 0.669482 | 1.1:+78076227 | None:intergenic |
| TACGCGAACAAGAAGAGCAG+CGG | 0.669620 | 1.1:+78072232 | None:intergenic |
| TTAGTTATAGTCTTCTTGCG+AGG | 0.676218 | 1.1:-78072556 | MS.gene71771:CDS |
| GTAATGAGAAGTCCAAACTC+CGG | 0.676979 | 1.1:+78076778 | None:intergenic |
| CAAGATTCACCTTTACTGCG+GGG | 0.678899 | 1.1:-78076971 | MS.gene71771:CDS |
| AAACGGGAATGGCATATACA+GGG | 0.680280 | 1.1:-78076655 | MS.gene71771:CDS |
| TTCTGGTGTGTGGATGAATG+TGG | 0.682155 | 1.1:-78076400 | MS.gene71771:CDS |
| TATGGTAGCCTTATCGATGG+CGG | 0.688793 | 1.1:-78077046 | MS.gene71771:CDS |
| GTCACACTACTCGTAAATGG+AGG | 0.699933 | 1.1:+78072392 | None:intergenic |
| TGAGACCTCTGATACAAATG+GGG | 0.710699 | 1.1:-78073826 | MS.gene71771:CDS |
| CGGGAATGGCATATACAGGG+AGG | 0.738065 | 1.1:-78076652 | MS.gene71771:CDS |
| CATAGAATCCCAGAGCACAG+TGG | 0.755507 | 1.1:+78076358 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATGATCATTTTTTTTTTT+TGG | - | chr1.1:78076305-78076324 | MS.gene71771:CDS | 10.0% |
| !! | AAATACTTGAATAAAACTAT+TGG | - | chr1.1:78074523-78074542 | MS.gene71771:intron | 15.0% |
| !! | AAATAGGATACAATAATATA+GGG | - | chr1.1:78074672-78074691 | MS.gene71771:intron | 15.0% |
| !! | AATTAATGTATATCAAATGT+TGG | + | chr1.1:78075923-78075942 | None:intergenic | 15.0% |
| !! | ATGTTAGTAATCTATAATTA+TGG | + | chr1.1:78072462-78072481 | None:intergenic | 15.0% |
| !! | TAAATAGGATACAATAATAT+AGG | - | chr1.1:78074671-78074690 | MS.gene71771:intron | 15.0% |
| !! | TTTAATTAGTTGTATAAACT+TGG | - | chr1.1:78073911-78073930 | MS.gene71771:intron | 15.0% |
| !! | AAACAATTATATATCTGTTC+TGG | - | chr1.1:78075471-78075490 | MS.gene71771:intron | 20.0% |
| !! | AAATACTAATCACTTAATTG+TGG | - | chr1.1:78076783-78076802 | MS.gene71771:CDS | 20.0% |
| !! | AATAGGATACAATAATATAG+GGG | - | chr1.1:78074673-78074692 | MS.gene71771:intron | 20.0% |
| !! | ATAAATAATTTATGCATTGC+AGG | - | chr1.1:78076041-78076060 | MS.gene71771:intron | 20.0% |
| !! | CATCTGTTAATTTATCTATT+AGG | - | chr1.1:78073282-78073301 | MS.gene71771:CDS | 20.0% |
| !! | TAACATCAGAAAATAAAACA+CGG | + | chr1.1:78075437-78075456 | None:intergenic | 20.0% |
| !! | TAGATGATCTATTAACTTAT+TGG | - | chr1.1:78073758-78073777 | MS.gene71771:CDS | 20.0% |
| !! | TTATACAACTAATTAAACCA+TGG | + | chr1.1:78073908-78073927 | None:intergenic | 20.0% |
| !!! | AACGTTTTCAAAAATGATAA+TGG | + | chr1.1:78074214-78074233 | None:intergenic | 20.0% |
| !!! | AGACATTTTCGAATTATAAA+AGG | + | chr1.1:78073329-78073348 | None:intergenic | 20.0% |
| !!! | ATGATGTATTTTTAAATACC+TGG | + | chr1.1:78073233-78073252 | None:intergenic | 20.0% |
| !!! | TCTTTTCAATTCAATTTCTT+TGG | - | chr1.1:78075250-78075269 | MS.gene71771:CDS | 20.0% |
| !!! | TTCCTTATAGTTTTCTTTTT+GGG | - | chr1.1:78072492-78072511 | MS.gene71771:CDS | 20.0% |
| !!! | TTTAAAATGCCACATTTTAT+TGG | - | chr1.1:78073814-78073833 | MS.gene71771:CDS | 20.0% |
| !!! | TTTTTTATGTGACAAATAAC+AGG | - | chr1.1:78074381-78074400 | MS.gene71771:intron | 20.0% |
| ! | AACATCAGAAAATAAAACAC+GGG | + | chr1.1:78075436-78075455 | None:intergenic | 25.0% |
| ! | AAGACTATAACTAATTTCAC+TGG | + | chr1.1:78076819-78076838 | None:intergenic | 25.0% |
| ! | AATAAAAAGTTACGAGAGTT+GGG | - | chr1.1:78075288-78075307 | MS.gene71771:CDS | 25.0% |
| ! | ACTTGAATAAAACTATTGGT+TGG | - | chr1.1:78074527-78074546 | MS.gene71771:intron | 25.0% |
| ! | ATAACAGTAAACATTGTCAT+TGG | + | chr1.1:78072209-78072228 | None:intergenic | 25.0% |
| ! | ATCCTCAAATTTACAAACTT+TGG | + | chr1.1:78075510-78075529 | None:intergenic | 25.0% |
| ! | ATCTTTCTGTCAAATTATAC+AGG | + | chr1.1:78075795-78075814 | None:intergenic | 25.0% |
| ! | ATGCGTAGATAAACAAAAAA+AGG | + | chr1.1:78073708-78073727 | None:intergenic | 25.0% |
| ! | CTAAAATTGAATCTCCATTT+GGG | + | chr1.1:78073062-78073081 | None:intergenic | 25.0% |
| ! | CTGTCATACAATTTATATCA+TGG | + | chr1.1:78074120-78074139 | None:intergenic | 25.0% |
| ! | TAAAGGTGAATTAGTAGTTA+AGG | - | chr1.1:78074615-78074634 | MS.gene71771:intron | 25.0% |
| ! | TAATAAAAAGTTACGAGAGT+TGG | - | chr1.1:78075287-78075306 | MS.gene71771:CDS | 25.0% |
| ! | TACATTAATTTCAACCAACT+TGG | - | chr1.1:78075933-78075952 | MS.gene71771:intron | 25.0% |
| ! | TAGGAATATTGTGTGTAAAT+AGG | - | chr1.1:78074656-78074675 | MS.gene71771:intron | 25.0% |
| ! | TAGTAAATAGTTACAGCTTA+TGG | - | chr1.1:78074564-78074583 | MS.gene71771:intron | 25.0% |
| ! | TCAACAAATTAACTAACCTT+GGG | + | chr1.1:78074347-78074366 | None:intergenic | 25.0% |
| ! | TCATAATAGTAATGCAGAAA+AGG | + | chr1.1:78076291-78076310 | None:intergenic | 25.0% |
| ! | TGCGTAGATAAACAAAAAAA+GGG | + | chr1.1:78073707-78073726 | None:intergenic | 25.0% |
| ! | TTCAACAAATTAACTAACCT+TGG | + | chr1.1:78074348-78074367 | None:intergenic | 25.0% |
| ! | TTGTCATTACCAATAAAATG+TGG | + | chr1.1:78073826-78073845 | None:intergenic | 25.0% |
| !! | AATCTATAGTAAAGCTTTTG+TGG | + | chr1.1:78073261-78073280 | None:intergenic | 25.0% |
| !! | ACTTTTTATTAACAGCTGTT+AGG | + | chr1.1:78075278-78075297 | None:intergenic | 25.0% |
| !! | AGAGGTAAACAATATTTTTC+TGG | - | chr1.1:78072642-78072661 | MS.gene71771:intron | 25.0% |
| !! | ATTAAGTTGTTCATTCAAAC+AGG | - | chr1.1:78076685-78076704 | MS.gene71771:CDS | 25.0% |
| !! | GCTGATATTTCTACATTATT+TGG | - | chr1.1:78076008-78076027 | MS.gene71771:intron | 25.0% |
| !! | GTGGCATTTTAAACATTTTT+AGG | + | chr1.1:78073807-78073826 | None:intergenic | 25.0% |
| !! | GTTCCTTATAGTTTTCTTTT+TGG | - | chr1.1:78072491-78072510 | MS.gene71771:CDS | 25.0% |
| !! | TATTTCACATAGCGTATTTT+TGG | - | chr1.1:78075144-78075163 | MS.gene71771:CDS | 25.0% |
| !! | TCTTACAATTTTCTTGACTA+TGG | - | chr1.1:78075840-78075859 | MS.gene71771:intron | 25.0% |
| !! | TTAAGTTGTTCATTCAAACA+GGG | - | chr1.1:78076686-78076705 | MS.gene71771:CDS | 25.0% |
| !!! | GAAAAAAGAGCATTAGAAAT+TGG | + | chr1.1:78075901-78075920 | None:intergenic | 25.0% |
| !!! | TATTTTTAAATACCTGGTCA+TGG | + | chr1.1:78073227-78073246 | None:intergenic | 25.0% |
| !!! | TTTTTTTTGGTGACTTTCTT+TGG | - | chr1.1:78076318-78076337 | MS.gene71771:CDS | 25.0% |
| AACAAAACCATAGTCATAGA+AGG | - | chr1.1:78075395-78075414 | MS.gene71771:intron | 30.0% | |
| AACATTGTCATTGGAAAAGT+AGG | + | chr1.1:78072200-78072219 | None:intergenic | 30.0% | |
| AAGAAAATAGCTCATTTCCA+TGG | + | chr1.1:78075702-78075721 | None:intergenic | 30.0% | |
| AAGACAAATGCATACGAATT+TGG | - | chr1.1:78072677-78072696 | MS.gene71771:intron | 30.0% | |
| AATCATTTATACTCTCAGTC+AGG | + | chr1.1:78076425-78076444 | None:intergenic | 30.0% | |
| AATTCCATCATTTCTTCGAT+TGG | + | chr1.1:78077038-78077057 | None:intergenic | 30.0% | |
| ACAAAACCATAGTCATAGAA+GGG | - | chr1.1:78075396-78075415 | MS.gene71771:intron | 30.0% | |
| ACATTGTCATTGGAAAAGTA+GGG | + | chr1.1:78072199-78072218 | None:intergenic | 30.0% | |
| AGATGGTACTGTTTGTATAT+GGG | - | chr1.1:78072141-78072160 | MS.gene71771:CDS | 30.0% | |
| AGATTCATCATTATGAATCC+GGG | + | chr1.1:78073591-78073610 | None:intergenic | 30.0% | |
| AGCTTATCATCCTATATAGA+AGG | - | chr1.1:78072760-78072779 | MS.gene71771:intron | 30.0% | |
| AGGGTTGAAATAAGTCAAAA+AGG | + | chr1.1:78075102-78075121 | None:intergenic | 30.0% | |
| AGTGATTCATTAGAGTGAAT+CGG | + | chr1.1:78073631-78073650 | None:intergenic | 30.0% | |
| ATATATCTGTTCTGGTGTAT+TGG | - | chr1.1:78075479-78075498 | MS.gene71771:intron | 30.0% | |
| ATGACAGTTGTTCATAGTAA+GGG | - | chr1.1:78074133-78074152 | MS.gene71771:intron | 30.0% | |
| ATGTTATCAATAGCAGATTG+CGG | + | chr1.1:78075184-78075203 | None:intergenic | 30.0% | |
| ATTCCATCATTTCTTCGATT+GGG | + | chr1.1:78077037-78077056 | None:intergenic | 30.0% | |
| ATTGGAAGCTTTACGTATTA+TGG | + | chr1.1:78075050-78075069 | None:intergenic | 30.0% | |
| CACACTGATATGTAAATACT+TGG | - | chr1.1:78074699-78074718 | MS.gene71771:intron | 30.0% | |
| CTCCAAAGTTTGTAAATTTG+AGG | - | chr1.1:78075505-78075524 | MS.gene71771:intron | 30.0% | |
| CTCCCAAAAAGAAAACTATA+AGG | + | chr1.1:78072497-78072516 | None:intergenic | 30.0% | |
| GAAATAAGTCAAAAAGGGAA+TGG | + | chr1.1:78075096-78075115 | None:intergenic | 30.0% | |
| GACAAATTCAAGATAACAAG+TGG | + | chr1.1:78073970-78073989 | None:intergenic | 30.0% | |
| GAGATCACATTGTTTAATGT+TGG | - | chr1.1:78074412-78074431 | MS.gene71771:intron | 30.0% | |
| GAGATTCATCATTATGAATC+CGG | + | chr1.1:78073592-78073611 | None:intergenic | 30.0% | |
| GATACAAAACTGAATCCAAT+TGG | - | chr1.1:78073413-78073432 | MS.gene71771:intron | 30.0% | |
| GATATTTAGTCCATCATTCT+AGG | - | chr1.1:78072264-78072283 | MS.gene71771:CDS | 30.0% | |
| GCGTAGATAAACAAAAAAAG+GGG | + | chr1.1:78073706-78073725 | None:intergenic | 30.0% | |
| GCTAAAATTGAATCTCCATT+TGG | + | chr1.1:78073063-78073082 | None:intergenic | 30.0% | |
| GGGTTGAAATAAGTCAAAAA+GGG | + | chr1.1:78075101-78075120 | None:intergenic | 30.0% | |
| TACATTCATGTGAGCTAAAA+GGG | - | chr1.1:78072566-78072585 | MS.gene71771:CDS | 30.0% | |
| TAGTAGTTAAGGTTAGTAGT+TGG | - | chr1.1:78074626-78074645 | MS.gene71771:intron | 30.0% | |
| TATGACAGTTGTTCATAGTA+AGG | - | chr1.1:78074132-78074151 | MS.gene71771:intron | 30.0% | |
| TATGGAACTGAATTGAACAT+TGG | - | chr1.1:78076374-78076393 | MS.gene71771:CDS | 30.0% | |
| TCCAATCAAAAGAGATTCTA+AGG | + | chr1.1:78072824-78072843 | None:intergenic | 30.0% | |
| TCTCGAGTATGTATCTATTT+CGG | - | chr1.1:78073442-78073461 | MS.gene71771:intron | 30.0% | |
| TCTTTATGCTGTGATCATAA+GGG | - | chr1.1:78075718-78075737 | MS.gene71771:intron | 30.0% | |
| TGATGAAGATTTCTTCTCTA+CGG | + | chr1.1:78076948-78076967 | None:intergenic | 30.0% | |
| TTCTTTATGCTGTGATCATA+AGG | - | chr1.1:78075717-78075736 | MS.gene71771:intron | 30.0% | |
| ! | ACATGATCTATTTTCACCAT+AGG | - | chr1.1:78074983-78075002 | MS.gene71771:intron | 30.0% |
| ! | ATAGGCAGAAGAAAAAGTAT+AGG | + | chr1.1:78072534-78072553 | None:intergenic | 30.0% |
| ! | ATCACTTAATTGTGGTTTGT+AGG | - | chr1.1:78076791-78076810 | MS.gene71771:CDS | 30.0% |
| ! | TACCATAGATTTAGAACCAA+CGG | + | chr1.1:78072322-78072341 | None:intergenic | 30.0% |
| ! | TCCTTAGAATCTCTTTTGAT+TGG | - | chr1.1:78072820-78072839 | MS.gene71771:intron | 30.0% |
| ! | TCTCGAGTATGTATCTATTT+TGG | - | chr1.1:78073442-78073461 | MS.gene71771:intron | 30.0% |
| ! | TTCCATCTTTGGAAAAATGT+TGG | - | chr1.1:78073102-78073121 | MS.gene71771:intron | 30.0% |
| ! | TTGACAAACATCCAGATTTT+GGG | - | chr1.1:78074277-78074296 | MS.gene71771:intron | 30.0% |
| !! | CTCTTTATTTCTGCTATTGA+CGG | + | chr1.1:78074925-78074944 | None:intergenic | 30.0% |
| !! | GAGCATCGGTAATAATATAT+TGG | + | chr1.1:78075068-78075087 | None:intergenic | 30.0% |
| !! | TACAGTGTTGACAAAAAAAG+TGG | + | chr1.1:78073676-78073695 | None:intergenic | 30.0% |
| !! | TCAATTTTAGCACATGGATA+TGG | - | chr1.1:78073072-78073091 | MS.gene71771:intron | 30.0% |
| AAACGCGTAAAATAAATGCC+TGG | + | chr1.1:78076714-78076733 | None:intergenic | 35.0% | |
| AACAAGATTCACCTTTACTG+CGG | - | chr1.1:78072408-78072427 | MS.gene71771:CDS | 35.0% | |
| AACGCGTAAAATAAATGCCT+GGG | + | chr1.1:78076713-78076732 | None:intergenic | 35.0% | |
| AACTAACCTTGGGCATAAAT+AGG | + | chr1.1:78074337-78074356 | None:intergenic | 35.0% | |
| AACTTTGACTGCAAAGGATT+TGG | - | chr1.1:78074465-78074484 | MS.gene71771:intron | 35.0% | |
| AATAACCTGAAAACCGCTTA+TGG | + | chr1.1:78076536-78076555 | None:intergenic | 35.0% | |
| AATGTACAAACTGGGTTCAT+AGG | + | chr1.1:78072552-78072571 | None:intergenic | 35.0% | |
| ACATATTTGCACCCAAAATC+TGG | + | chr1.1:78074291-78074310 | None:intergenic | 35.0% | |
| ACATGAGGATTGGGTATATT+CGG | - | chr1.1:78072843-78072862 | MS.gene71771:intron | 35.0% | |
| ACTTATGACATGTCCATAAG+CGG | - | chr1.1:78076520-78076539 | MS.gene71771:CDS | 35.0% | |
| AGATAAACAAAAAAAGGGGC+TGG | + | chr1.1:78073702-78073721 | None:intergenic | 35.0% | |
| AGATTCATCATGATGAATCC+GGG | + | chr1.1:78073489-78073508 | None:intergenic | 35.0% | |
| AGGAAACTAAAGTGAAGAGT+TGG | - | chr1.1:78075003-78075022 | MS.gene71771:intron | 35.0% | |
| AGTTAAGGTTAGTAGTTGGT+TGG | - | chr1.1:78074630-78074649 | MS.gene71771:intron | 35.0% | |
| ATAACAAGACTTCTGCAAAG+TGG | + | chr1.1:78074245-78074264 | None:intergenic | 35.0% | |
| ATGAGACCTCTGATACAAAT+GGG | - | chr1.1:78075554-78075573 | MS.gene71771:intron | 35.0% | |
| ATGCATACGAATTTGGAAGA+TGG | - | chr1.1:78072684-78072703 | MS.gene71771:intron | 35.0% | |
| ATTGGGTATATTCGGTTGAA+TGG | - | chr1.1:78072851-78072870 | MS.gene71771:intron | 35.0% | |
| CAAAAACCTATTTATGCCCA+AGG | - | chr1.1:78074328-78074347 | MS.gene71771:intron | 35.0% | |
| CAACTAGAATTTATGCTCCA+TGG | - | chr1.1:78074029-78074048 | MS.gene71771:intron | 35.0% | |
| CAGATGGTACTGTTTGTATA+TGG | - | chr1.1:78072140-78072159 | MS.gene71771:CDS | 35.0% | |
| CAGTGAGTTAGACAACATAT+AGG | + | chr1.1:78073353-78073372 | None:intergenic | 35.0% | |
| CATGTTGCTATGCAGAATAA+AGG | - | chr1.1:78074598-78074617 | MS.gene71771:intron | 35.0% | |
| CCATAGAGTTTATGTGATTC+AGG | + | chr1.1:78075679-78075698 | None:intergenic | 35.0% | |
| CCTGAATCACATAAACTCTA+TGG | - | chr1.1:78075676-78075695 | MS.gene71771:intron | 35.0% | |
| CTCACATGAATGTACAAACT+GGG | + | chr1.1:78072560-78072579 | None:intergenic | 35.0% | |
| GAATCTCGATTTAACAACCA+TGG | - | chr1.1:78073888-78073907 | MS.gene71771:intron | 35.0% | |
| GAGATTCATCATGATGAATC+CGG | + | chr1.1:78073490-78073509 | None:intergenic | 35.0% | |
| GATGCAGATAAAATGCTTTG+TGG | + | chr1.1:78072922-78072941 | None:intergenic | 35.0% | |
| GATTCATCATTATGAATCCG+GGG | + | chr1.1:78073590-78073609 | None:intergenic | 35.0% | |
| GCATCTCATATTGAGGATAT+GGG | - | chr1.1:78075338-78075357 | MS.gene71771:CDS | 35.0% | |
| GTACATTCATGTGAGCTAAA+AGG | - | chr1.1:78072565-78072584 | MS.gene71771:CDS | 35.0% | |
| GTGATTCATTAGAGTGAATC+GGG | + | chr1.1:78073630-78073649 | None:intergenic | 35.0% | |
| GTGTTTACAATCACAACAAC+AGG | - | chr1.1:78076219-78076238 | MS.gene71771:CDS | 35.0% | |
| TACTCGAGATTAGTACCAAT+TGG | + | chr1.1:78073533-78073552 | None:intergenic | 35.0% | |
| TACTCGAGATTTGTACCAAT+TGG | + | chr1.1:78073431-78073450 | None:intergenic | 35.0% | |
| TAGAGCAGTAAAGTGTACAA+CGG | + | chr1.1:78075986-78076005 | None:intergenic | 35.0% | |
| TCATTACCTGTAAGCATCAA+TGG | - | chr1.1:78072619-78072638 | MS.gene71771:intron | 35.0% | |
| TCTTTCTCATTGTTATCTGC+TGG | - | chr1.1:78074438-78074457 | MS.gene71771:intron | 35.0% | |
| TGACAGTTGTTCATAGTAAG+GGG | - | chr1.1:78074134-78074153 | MS.gene71771:intron | 35.0% | |
| TGACTGTAAATTATCATGCC+TGG | - | chr1.1:78072287-78072306 | MS.gene71771:CDS | 35.0% | |
| TGATTCATTAGAGTGAATCG+GGG | + | chr1.1:78073629-78073648 | None:intergenic | 35.0% | |
| TGATTGTAAACACAGAGAAC+TGG | + | chr1.1:78076212-78076231 | None:intergenic | 35.0% | |
| TGCATCTCATATTGAGGATA+TGG | - | chr1.1:78075337-78075356 | MS.gene71771:CDS | 35.0% | |
| TTAGTTATAGTCTTCTTGCG+AGG | - | chr1.1:78076825-78076844 | MS.gene71771:intron | 35.0% | |
| TTCCATCATTTCTTCGATTG+GGG | + | chr1.1:78077036-78077055 | None:intergenic | 35.0% | |
| TTGTCAATTAGTGGCAATAG+TGG | - | chr1.1:78074769-78074788 | MS.gene71771:intron | 35.0% | |
| TTTACAGTCACCTAGAATGA+TGG | + | chr1.1:78072277-78072296 | None:intergenic | 35.0% | |
| TTTGATTGGACATGAGGATT+GGG | - | chr1.1:78072834-78072853 | MS.gene71771:intron | 35.0% | |
| TTTGCATCTACTTCTTCAGA+TGG | - | chr1.1:78072124-78072143 | MS.gene71771:CDS | 35.0% | |
| ! | AAGCATTTTATCTGCATCCA+TGG | - | chr1.1:78072924-78072943 | MS.gene71771:intron | 35.0% |
| ! | AATGATGGAATTCTAGCTGT+TGG | - | chr1.1:78077046-78077065 | MS.gene71771:CDS | 35.0% |
| ! | ATACTTGGTGAATAGACCAT+TGG | - | chr1.1:78074714-78074733 | MS.gene71771:intron | 35.0% |
| ! | CACCAACATTTTTCCAAAGA+TGG | + | chr1.1:78073107-78073126 | None:intergenic | 35.0% |
| ! | CTATTGATAACATTGCTCGT+AGG | - | chr1.1:78075191-78075210 | MS.gene71771:CDS | 35.0% |
| ! | CTCTTCACTTTAGTTTCCTA+TGG | + | chr1.1:78075002-78075021 | None:intergenic | 35.0% |
| ! | CTTGACAAACATCCAGATTT+TGG | - | chr1.1:78074276-78074295 | MS.gene71771:intron | 35.0% |
| ! | GTAGAGGCATGACATATAAA+AGG | + | chr1.1:78077178-78077197 | None:intergenic | 35.0% |
| ! | GTTAGTAGTTGGTTGGTTAT+AGG | - | chr1.1:78074637-78074656 | MS.gene71771:intron | 35.0% |
| ! | TAAGCGCTTGTGATTTTGTT+CGG | - | chr1.1:78076480-78076499 | MS.gene71771:CDS | 35.0% |
| ! | TGGTTGACATTTGTTGAGTT+TGG | - | chr1.1:78076338-78076357 | MS.gene71771:CDS | 35.0% |
| !! | AAAATGTTGGTGATGACAAC+TGG | - | chr1.1:78073115-78073134 | MS.gene71771:intron | 35.0% |
| !! | AATGCTTTGTGGTTGATAAC+AGG | + | chr1.1:78072911-78072930 | None:intergenic | 35.0% |
| !! | AGTTGTCTGCAATTTTGACA+CGG | + | chr1.1:78074014-78074033 | None:intergenic | 35.0% |
| !! | ATCTCTTTTGATTGGACATG+AGG | - | chr1.1:78072828-78072847 | MS.gene71771:intron | 35.0% |
| !! | ATTTTAGCACATGGATATGG+TGG | - | chr1.1:78073075-78073094 | MS.gene71771:intron | 35.0% |
| !! | GGAGATTCAATTTTAGCACA+TGG | - | chr1.1:78073066-78073085 | MS.gene71771:intron | 35.0% |
| !! | TTCCGTTGGTTCTAAATCTA+TGG | - | chr1.1:78072317-78072336 | MS.gene71771:CDS | 35.0% |
| !! | TTTTGATTGGACATGAGGAT+TGG | - | chr1.1:78072833-78072852 | MS.gene71771:intron | 35.0% |
| AAAACGGCCAAATAGAGTTG+TGG | - | chr1.1:78077074-78077093 | MS.gene71771:CDS | 40.0% | |
| AAACGGGAATGGCATATACA+GGG | - | chr1.1:78072726-78072745 | MS.gene71771:intron | 40.0% | |
| AAGGACAGGACCTTCTATAT+AGG | + | chr1.1:78072773-78072792 | None:intergenic | 40.0% | |
| AATTGACAACTCCGTCTCTA+AGG | + | chr1.1:78074758-78074777 | None:intergenic | 40.0% | |
| ACAAGATTCACCTTTACTGC+GGG | - | chr1.1:78072409-78072428 | MS.gene71771:CDS | 40.0% | |
| ACAGACTCCACAACTCTATT+TGG | + | chr1.1:78077084-78077103 | None:intergenic | 40.0% | |
| ACAGATATGCTTGCATTCTG+AGG | + | chr1.1:78076263-78076282 | None:intergenic | 40.0% | |
| ACCTCCAATTGAAGATCAAC+TGG | - | chr1.1:78075636-78075655 | MS.gene71771:intron | 40.0% | |
| ACGCGTAAAATAAATGCCTG+GGG | + | chr1.1:78076712-78076731 | None:intergenic | 40.0% | |
| ATATGGGTCCATCCAAATGA+TGG | - | chr1.1:78075354-78075373 | MS.gene71771:CDS | 40.0% | |
| ATCAACCCCATTTGTATCAG+AGG | + | chr1.1:78075563-78075582 | None:intergenic | 40.0% | |
| ATCGGTGACTGATATAGCAT+GGG | - | chr1.1:78073170-78073189 | MS.gene71771:CDS | 40.0% | |
| CAAAACGATCTAAGCCAAGT+TGG | + | chr1.1:78075950-78075969 | None:intergenic | 40.0% | |
| CAATTGAAGATCAACTGGCA+TGG | - | chr1.1:78075641-78075660 | MS.gene71771:intron | 40.0% | |
| CATGAGACCTCTGATACAAA+TGG | - | chr1.1:78075553-78075572 | MS.gene71771:intron | 40.0% | |
| CATGCCAGTTGATCTTCAAT+TGG | + | chr1.1:78075643-78075662 | None:intergenic | 40.0% | |
| CGACAAGACAGTGAAAATCT+GGG | - | chr1.1:78076922-78076941 | MS.gene71771:intron | 40.0% | |
| CTAGCTGTTGGAATGGAAAA+CGG | - | chr1.1:78077058-78077077 | MS.gene71771:CDS | 40.0% | |
| GAAATAGCAGCTAGAGTTGT+GGG | + | chr1.1:78075130-78075149 | None:intergenic | 40.0% | |
| GATCATGTTTAGTGCACACA+TGG | + | chr1.1:78074971-78074990 | None:intergenic | 40.0% | |
| GATGTCTGCATCTCATATTG+AGG | - | chr1.1:78075331-78075350 | MS.gene71771:CDS | 40.0% | |
| GATTCATCATGATGAATCCG+GGG | + | chr1.1:78073488-78073507 | None:intergenic | 40.0% | |
| GCTCACATGAATGTACAAAC+TGG | + | chr1.1:78072561-78072580 | None:intergenic | 40.0% | |
| GGACATATTGTCTACGTACT+TGG | - | chr1.1:78075309-78075328 | MS.gene71771:CDS | 40.0% | |
| GGATTATCTGGTCATGTTCT+TGG | - | chr1.1:78076864-78076883 | MS.gene71771:intron | 40.0% | |
| GGTGTTAACTTTGACTGCAA+AGG | - | chr1.1:78074459-78074478 | MS.gene71771:intron | 40.0% | |
| GTAATGAGAAGTCCAAACTC+CGG | + | chr1.1:78072606-78072625 | None:intergenic | 40.0% | |
| GTGAACCTGTTGCAAATTCA+TGG | + | chr1.1:78076901-78076920 | None:intergenic | 40.0% | |
| TAAAGTGTACAACGGTGAGA+CGG | + | chr1.1:78075978-78075997 | None:intergenic | 40.0% | |
| TACAGCTTATGGTAAGCTGT+TGG | - | chr1.1:78074575-78074594 | MS.gene71771:intron | 40.0% | |
| TAGAAGGGAAACCTTAGAGA+CGG | - | chr1.1:78074744-78074763 | MS.gene71771:intron | 40.0% | |
| TAGCTTAACAGTGACACAGA+TGG | - | chr1.1:78076140-78076159 | MS.gene71771:intron | 40.0% | |
| TAGTGCACACATGGATTCTT+TGG | + | chr1.1:78074962-78074981 | None:intergenic | 40.0% | |
| TAGTGTGACAGCATTGTCTT+GGG | - | chr1.1:78077003-78077022 | MS.gene71771:CDS | 40.0% | |
| TATCACTACCAGCCATCATT+TGG | + | chr1.1:78075369-78075388 | None:intergenic | 40.0% | |
| TCACATAAACTCTATGGCCA+TGG | - | chr1.1:78075682-78075701 | MS.gene71771:intron | 40.0% | |
| TCATGTAAGGTATGCACTGT+TGG | - | chr1.1:78075757-78075776 | MS.gene71771:intron | 40.0% | |
| TCCATCCTCTTGTCTGTTAT+AGG | + | chr1.1:78077107-78077126 | None:intergenic | 40.0% | |
| TCCTATAACAGACAAGAGGA+TGG | - | chr1.1:78077103-78077122 | MS.gene71771:intron | 40.0% | |
| TCGTAGGTAGTTGACTGATA+GGG | - | chr1.1:78074496-78074515 | MS.gene71771:intron | 40.0% | |
| TCTGATACAAATGGGGTTGA+TGG | - | chr1.1:78075562-78075581 | MS.gene71771:intron | 40.0% | |
| TCTGTCCTATAACAGACAAG+AGG | - | chr1.1:78077099-78077118 | MS.gene71771:intron | 40.0% | |
| TGAAATAGCAGCTAGAGTTG+TGG | + | chr1.1:78075131-78075150 | None:intergenic | 40.0% | |
| TGAATCTCATCTTGAATCCC+CGG | - | chr1.1:78073468-78073487 | MS.gene71771:intron | 40.0% | |
| TGAGACCTCTGATACAAATG+GGG | - | chr1.1:78075555-78075574 | MS.gene71771:intron | 40.0% | |
| TGGACAAGACTATGATGATC+TGG | - | chr1.1:78072944-78072963 | MS.gene71771:intron | 40.0% | |
| TGGATGAATGTGGTTACTGT+TGG | - | chr1.1:78072991-78073010 | MS.gene71771:intron | 40.0% | |
| TTAAGCTATGGGATTGCAAG+CGG | + | chr1.1:78076128-78076147 | None:intergenic | 40.0% | |
| TTATCCTAGCTTCGCCATTA+TGG | - | chr1.1:78074854-78074873 | MS.gene71771:intron | 40.0% | |
| ! | AAGCGCTTGTGATTTTGTTC+GGG | - | chr1.1:78076481-78076500 | MS.gene71771:CDS | 40.0% |
| ! | AGCTAAAAGGGCATACAGAT+TGG | - | chr1.1:78072578-78072597 | MS.gene71771:intron | 40.0% |
| ! | AGTCTACAACTTGCTTCTTG+TGG | - | chr1.1:78077241-78077260 | MS.gene71771:CDS | 40.0% |
| ! | ATGCACTGTTGGTCTAACTA+TGG | - | chr1.1:78075768-78075787 | MS.gene71771:intron | 40.0% |
| ! | ATTTTGTTCGGGAGAGCTTA+TGG | - | chr1.1:78076492-78076511 | MS.gene71771:CDS | 40.0% |
| ! | CAACTTGGCTTAGATCGTTT+TGG | - | chr1.1:78075948-78075967 | MS.gene71771:intron | 40.0% |
| ! | CTGTGTCACTGTTAAGCTAT+GGG | + | chr1.1:78076139-78076158 | None:intergenic | 40.0% |
| ! | GCTTGTTGCTTCTTCATGTA+AGG | - | chr1.1:78075744-78075763 | MS.gene71771:intron | 40.0% |
| ! | TCTGTGTCACTGTTAAGCTA+TGG | + | chr1.1:78076140-78076159 | None:intergenic | 40.0% |
| ! | TGACAACTGGCTTACACAAA+AGG | - | chr1.1:78073128-78073147 | MS.gene71771:intron | 40.0% |
| ! | TGGAATTCTAGCTGTTGGAA+TGG | - | chr1.1:78077051-78077070 | MS.gene71771:CDS | 40.0% |
| ! | TTTGGAGCACATCGATGTTA+TGG | - | chr1.1:78076356-78076375 | MS.gene71771:CDS | 40.0% |
| !! | ACCATTGGCTCTTTGTAGAA+GGG | - | chr1.1:78074729-78074748 | MS.gene71771:intron | 40.0% |
| !! | ATCTATGGTAGCCTTATCGA+TGG | - | chr1.1:78072332-78072351 | MS.gene71771:CDS | 40.0% |
| !! | GATCATCATAGTCTTGTCCA+TGG | + | chr1.1:78072944-78072963 | None:intergenic | 40.0% |
| AAACACAGTTGGAACTGCGT+CGG | + | chr1.1:78075611-78075630 | None:intergenic | 45.0% | |
| AAAGTGTACAACGGTGAGAC+GGG | + | chr1.1:78075977-78075996 | None:intergenic | 45.0% | |
| AACCAACGGAAAAAGAGTCC+AGG | + | chr1.1:78072308-78072327 | None:intergenic | 45.0% | |
| AACCATAGTCATAGAAGGGC+TGG | - | chr1.1:78075400-78075419 | MS.gene71771:intron | 45.0% | |
| AAGATTCACCTTTACTGCGG+GGG | - | chr1.1:78072411-78072430 | MS.gene71771:CDS | 45.0% | |
| ACCGATGCAAAATGACCAGA+GGG | + | chr1.1:78073156-78073175 | None:intergenic | 45.0% | |
| ACCTCTCCATTGATGCTTAC+AGG | + | chr1.1:78072628-78072647 | None:intergenic | 45.0% | |
| ACCTGTAAGCATCAATGGAG+AGG | - | chr1.1:78072624-78072643 | MS.gene71771:intron | 45.0% | |
| ACGATTTGACCACTACATCC+AGG | + | chr1.1:78072366-78072385 | None:intergenic | 45.0% | |
| ACTACCAGCCATCATTTGGA+TGG | + | chr1.1:78075365-78075384 | None:intergenic | 45.0% | |
| AGAGAAACCTCGACTTTCCA+TGG | + | chr1.1:78074049-78074068 | None:intergenic | 45.0% | |
| AGCTAGAGTTGTGGGCAAAT+AGG | + | chr1.1:78075122-78075141 | None:intergenic | 45.0% | |
| AGTCTTGGTATGAGATTGCG+CGG | - | chr1.1:78074080-78074099 | MS.gene71771:intron | 45.0% | |
| ATATCATGGCCATGAACCTG+AGG | + | chr1.1:78074106-78074125 | None:intergenic | 45.0% | |
| CAAACGGGAATGGCATATAC+AGG | - | chr1.1:78072725-78072744 | MS.gene71771:intron | 45.0% | |
| CAAGATTCACCTTTACTGCG+GGG | - | chr1.1:78072410-78072429 | MS.gene71771:CDS | 45.0% | |
| CAATAGCAGATTGCGGAAAC+TGG | + | chr1.1:78075177-78075196 | None:intergenic | 45.0% | |
| CAGTTTCTGAGCTGATGTAG+CGG | - | chr1.1:78074895-78074914 | MS.gene71771:intron | 45.0% | |
| CATCGGTGACTGATATAGCA+TGG | - | chr1.1:78073169-78073188 | MS.gene71771:CDS | 45.0% | |
| CTCCCCAATCGAAGAAATGA+TGG | - | chr1.1:78077031-78077050 | MS.gene71771:CDS | 45.0% | |
| CTCGTAGGTAGTTGACTGAT+AGG | - | chr1.1:78074495-78074514 | MS.gene71771:intron | 45.0% | |
| CTCTTCAAGATGGAGAGTCT+TGG | - | chr1.1:78074065-78074084 | MS.gene71771:intron | 45.0% | |
| CTGAAAAGACTTCTGGTGTG+TGG | - | chr1.1:78072971-78072990 | MS.gene71771:intron | 45.0% | |
| CTGTATATGCCATTCCCGTT+TGG | + | chr1.1:78072727-78072746 | None:intergenic | 45.0% | |
| CTTACACAAAAGGTTCCCTC+TGG | - | chr1.1:78073138-78073157 | MS.gene71771:intron | 45.0% | |
| GAGACGGAGTTGTCAATTAG+TGG | - | chr1.1:78074760-78074779 | MS.gene71771:intron | 45.0% | |
| GCCAGTTGATCTTCAATTGG+AGG | + | chr1.1:78075640-78075659 | None:intergenic | 45.0% | |
| GCGACAAGACAGTGAAAATC+TGG | - | chr1.1:78076921-78076940 | MS.gene71771:intron | 45.0% | |
| GCTAGAGTTGTGGGCAAATA+GGG | + | chr1.1:78075121-78075140 | None:intergenic | 45.0% | |
| GCTGTCACACTACTCGTAAA+TGG | + | chr1.1:78076995-78077014 | None:intergenic | 45.0% | |
| GGAGGTTCAGTAAACACAGT+TGG | + | chr1.1:78075622-78075641 | None:intergenic | 45.0% | |
| GGATTTGGCTGTATACTCGT+AGG | - | chr1.1:78074480-78074499 | MS.gene71771:intron | 45.0% | |
| GGTCAAATCGTCCTTGCAAT+GGG | - | chr1.1:78072375-78072394 | MS.gene71771:CDS | 45.0% | |
| GGTGCAAATATGTCAGCTCT+TGG | - | chr1.1:78074298-78074317 | MS.gene71771:intron | 45.0% | |
| GTAGTGTGACAGCATTGTCT+TGG | - | chr1.1:78077002-78077021 | MS.gene71771:CDS | 45.0% | |
| GTCACACTACTCGTAAATGG+AGG | + | chr1.1:78076992-78077011 | None:intergenic | 45.0% | |
| GTCGAGGTTTCTCTTCAAGA+TGG | - | chr1.1:78074055-78074074 | MS.gene71771:intron | 45.0% | |
| TACAGATTGGATCCGGAGTT+TGG | - | chr1.1:78072591-78072610 | MS.gene71771:intron | 45.0% | |
| TACCAGCCCTTCTATGACTA+TGG | + | chr1.1:78075405-78075424 | None:intergenic | 45.0% | |
| TATAGAAGGTCCTGTCCTTG+TGG | - | chr1.1:78072774-78072793 | MS.gene71771:intron | 45.0% | |
| TATATCAGCTAGCCATGACC+AGG | - | chr1.1:78073212-78073231 | MS.gene71771:CDS | 45.0% | |
| TATCCAATCCTCCCATTGCA+AGG | + | chr1.1:78072389-78072408 | None:intergenic | 45.0% | |
| TCATGTTCTTGGAACCCACA+CGG | - | chr1.1:78076875-78076894 | MS.gene71771:intron | 45.0% | |
| TCCCTTCTACAAAGAGCCAA+TGG | + | chr1.1:78074733-78074752 | None:intergenic | 45.0% | |
| TCTGGCATGGAGGAAAATTG+AGG | - | chr1.1:78077207-78077226 | MS.gene71771:intron | 45.0% | |
| TGGCGACAAAGATACCTTTC+CGG | + | chr1.1:78072442-78072461 | None:intergenic | 45.0% | |
| TGGGATTCTATGGTGGTCAT+TGG | - | chr1.1:78073034-78073053 | MS.gene71771:intron | 45.0% | |
| TGGTCAAATCGTCCTTGCAA+TGG | - | chr1.1:78072374-78072393 | MS.gene71771:CDS | 45.0% | |
| TTATAGTCTTCTTGCGAGGC+AGG | - | chr1.1:78076829-78076848 | MS.gene71771:intron | 45.0% | |
| TTATGCTCCATGGAAAGTCG+AGG | - | chr1.1:78074039-78074058 | MS.gene71771:intron | 45.0% | |
| TTCTGCCACAGCAGTAGATT+GGG | + | chr1.1:78076067-78076086 | None:intergenic | 45.0% | |
| TTCTGGTGTGTGGATGAATG+TGG | - | chr1.1:78072981-78073000 | MS.gene71771:intron | 45.0% | |
| TTGCAAATTCATGGCCGTGT+GGG | + | chr1.1:78076892-78076911 | None:intergenic | 45.0% | |
| ! | AAGGGCATACAGATTGGATC+CGG | - | chr1.1:78072584-78072603 | MS.gene71771:intron | 45.0% |
| ! | AAGGGGAATCACCGTTTTGT+TGG | - | chr1.1:78074151-78074170 | MS.gene71771:intron | 45.0% |
| ! | CAATTTTCCTCCATGCCAGA+CGG | + | chr1.1:78077207-78077226 | None:intergenic | 45.0% |
| ! | CACACACCAGAAGTCTTTTC+AGG | + | chr1.1:78072973-78072992 | None:intergenic | 45.0% |
| ! | CATGTCCATAAGCGGTTTTC+AGG | - | chr1.1:78076528-78076547 | MS.gene71771:CDS | 45.0% |
| ! | GTTGGTTCATGGAAAGCAGT+TGG | - | chr1.1:78076102-78076121 | MS.gene71771:intron | 45.0% |
| !! | ATGGTGGATCGTTCCATCTT+TGG | - | chr1.1:78073091-78073110 | MS.gene71771:intron | 45.0% |
| !! | GACCATTGGCTCTTTGTAGA+AGG | - | chr1.1:78074728-78074747 | MS.gene71771:intron | 45.0% |
| !! | GATATAGCATGGGCTAGATC+TGG | - | chr1.1:78073180-78073199 | MS.gene71771:CDS | 45.0% |
| !! | GATGGAAGCATTGTAGTACC+GGG | - | chr1.1:78077121-78077140 | MS.gene71771:intron | 45.0% |
| !! | GGATGGAAGCATTGTAGTAC+CGG | - | chr1.1:78077120-78077139 | MS.gene71771:intron | 45.0% |
| !! | TACAAATGGGGTTGATGGTC+TGG | - | chr1.1:78075567-78075586 | MS.gene71771:intron | 45.0% |
| !! | TATGGTAGCCTTATCGATGG+CGG | - | chr1.1:78072335-78072354 | MS.gene71771:CDS | 45.0% |
| !! | TCCCTCTGGTCATTTTGCAT+CGG | - | chr1.1:78073152-78073171 | MS.gene71771:intron | 45.0% |
| AACACAGTTGGAACTGCGTC+GGG | + | chr1.1:78075610-78075629 | None:intergenic | 50.0% | |
| AACTGGCATGGCACACACTT+TGG | - | chr1.1:78075653-78075672 | MS.gene71771:intron | 50.0% | |
| AAGAAGAAGAGCCAGCCACA+AGG | + | chr1.1:78072792-78072811 | None:intergenic | 50.0% | |
| AGGCAATTCCGCCATCGATA+AGG | + | chr1.1:78072346-78072365 | None:intergenic | 50.0% | |
| AGGGAATGGATGCAGAGCAT+CGG | + | chr1.1:78075082-78075101 | None:intergenic | 50.0% | |
| ATCGCCATAATGGCGAAGCT+AGG | + | chr1.1:78074861-78074880 | None:intergenic | 50.0% | |
| CAAATCGTCCTTGCAATGGG+AGG | - | chr1.1:78072378-78072397 | MS.gene71771:CDS | 50.0% | |
| CACCGATGCAAAATGACCAG+AGG | + | chr1.1:78073157-78073176 | None:intergenic | 50.0% | |
| CACGGCCATGAATTTGCAAC+AGG | - | chr1.1:78076893-78076912 | MS.gene71771:intron | 50.0% | |
| CATAGAATCCCAGAGCACAG+TGG | + | chr1.1:78073026-78073045 | None:intergenic | 50.0% | |
| CATCAGCTCCGCCAACAAAA+CGG | + | chr1.1:78074165-78074184 | None:intergenic | 50.0% | |
| CGCTACATCAGCTCAGAAAC+TGG | + | chr1.1:78074897-78074916 | None:intergenic | 50.0% | |
| CTACAGTAAACCGTCTGGCA+TGG | - | chr1.1:78077194-78077213 | MS.gene71771:intron | 50.0% | |
| CTACTGCTGTGGCAGAAGTA+TGG | - | chr1.1:78076070-78076089 | MS.gene71771:intron | 50.0% | |
| CTTCCGTGGATGCAACCAAA+GGG | + | chr1.1:78072882-78072901 | None:intergenic | 50.0% | |
| CTTCTGCCACAGCAGTAGAT+TGG | + | chr1.1:78076068-78076087 | None:intergenic | 50.0% | |
| CTTTGGTTGCATCCACGGAA+GGG | - | chr1.1:78072881-78072900 | MS.gene71771:intron | 50.0% | |
| GAACTAAGCCACTGTGCTCT+GGG | - | chr1.1:78073015-78073034 | MS.gene71771:intron | 50.0% | |
| GAGTGAATCGGGGTTCATTG+CGG | + | chr1.1:78073619-78073638 | None:intergenic | 50.0% | |
| GTACTTCCACTGACGAGTAG+TGG | - | chr1.1:78072169-78072188 | MS.gene71771:CDS | 50.0% | |
| GTGACAGCATTGTCTTGGGT+TGG | - | chr1.1:78077007-78077026 | MS.gene71771:CDS | 50.0% | |
| GTTGCAAATTCATGGCCGTG+TGG | + | chr1.1:78076893-78076912 | None:intergenic | 50.0% | |
| TACGCGAACAAGAAGAGCAG+CGG | + | chr1.1:78077152-78077171 | None:intergenic | 50.0% | |
| TAGCTTCGCCATTATGGCGA+TGG | - | chr1.1:78074860-78074879 | MS.gene71771:intron | 50.0% | |
| TATGCCATTCCCGTTTGGCA+CGG | + | chr1.1:78072722-78072741 | None:intergenic | 50.0% | |
| TGCCAGACGGTTTACTGTAG+AGG | + | chr1.1:78077194-78077213 | None:intergenic | 50.0% | |
| TGCCTCTACAGTAAACCGTC+TGG | - | chr1.1:78077189-78077208 | MS.gene71771:intron | 50.0% | |
| TGCGTCGGGAACAGTTTCAA+AGG | + | chr1.1:78075596-78075615 | None:intergenic | 50.0% | |
| TGGCAGCCTGAAAAGACTTC+TGG | - | chr1.1:78072964-78072983 | MS.gene71771:intron | 50.0% | |
| TTACGTAGCTCCGTGCCAAA+CGG | - | chr1.1:78072709-78072728 | MS.gene71771:intron | 50.0% | |
| TTCCGTGGATGCAACCAAAG+GGG | + | chr1.1:78072881-78072900 | None:intergenic | 50.0% | |
| TTTGGTTGCATCCACGGAAG+GGG | - | chr1.1:78072882-78072901 | MS.gene71771:intron | 50.0% | |
| ! | CTGTGGCAGAAGTATGGCTT+TGG | - | chr1.1:78076076-78076095 | MS.gene71771:intron | 50.0% |
| ! | TGCCTGGACTCTTTTTCCGT+TGG | - | chr1.1:78072303-78072322 | MS.gene71771:CDS | 50.0% |
| !! | AGGGACACAAGCGGATTATC+TGG | - | chr1.1:78076852-78076871 | MS.gene71771:intron | 50.0% |
| !! | CACTGTGCTCTGGGATTCTA+TGG | - | chr1.1:78073024-78073043 | MS.gene71771:intron | 50.0% |
| !! | GAAGTATGGCTTTGGCAGGT+TGG | - | chr1.1:78076084-78076103 | MS.gene71771:intron | 50.0% |
| !! | GGGAATCACCGTTTTGTTGG+CGG | - | chr1.1:78074154-78074173 | MS.gene71771:intron | 50.0% |
| !! | TGTGCTCTGGGATTCTATGG+TGG | - | chr1.1:78073027-78073046 | MS.gene71771:intron | 50.0% |
| !! | TTATCGATGGCGGAATTGCC+TGG | - | chr1.1:78072345-78072364 | MS.gene71771:CDS | 50.0% |
| AACAGCCGCCATCGCCATAA+TGG | + | chr1.1:78074871-78074890 | None:intergenic | 55.0% | |
| ACCCCCTTTGGTTGCATCCA+CGG | - | chr1.1:78072876-78072895 | MS.gene71771:intron | 55.0% | |
| AGTCTTCTTGCGAGGCAGGA+GGG | - | chr1.1:78076833-78076852 | MS.gene71771:intron | 55.0% | |
| ATAACAGGCTTCCCCTTCCG+TGG | + | chr1.1:78072896-78072915 | None:intergenic | 55.0% | |
| CAGTAAACCGTCTGGCATGG+AGG | - | chr1.1:78077197-78077216 | MS.gene71771:intron | 55.0% | |
| CCTTCCGTGGATGCAACCAA+AGG | + | chr1.1:78072883-78072902 | None:intergenic | 55.0% | |
| CCTTTGGTTGCATCCACGGA+AGG | - | chr1.1:78072880-78072899 | MS.gene71771:intron | 55.0% | |
| CGAACTAAGCCACTGTGCTC+TGG | - | chr1.1:78073014-78073033 | MS.gene71771:intron | 55.0% | |
| CGGGAATGGCATATACAGGG+AGG | - | chr1.1:78072729-78072748 | MS.gene71771:intron | 55.0% | |
| CGTCCTTGCAATGGGAGGAT+TGG | - | chr1.1:78072383-78072402 | MS.gene71771:CDS | 55.0% | |
| CTTCGCCATTATGGCGATGG+CGG | - | chr1.1:78074863-78074882 | MS.gene71771:intron | 55.0% | |
| GCGGAATTGCCTGGATGTAG+TGG | - | chr1.1:78072354-78072373 | MS.gene71771:CDS | 55.0% | |
| GGCTTACCACTACTCGTCAG+TGG | + | chr1.1:78072178-78072197 | None:intergenic | 55.0% | |
| GGGTCCATCCAAATGATGGC+TGG | - | chr1.1:78075358-78075377 | MS.gene71771:intron | 55.0% | |
| GGTGGTCATTGGAGCCCAAA+TGG | - | chr1.1:78073045-78073064 | MS.gene71771:intron | 55.0% | |
| GGTTGAATGGCAACCCCCTT+TGG | - | chr1.1:78072864-78072883 | MS.gene71771:intron | 55.0% | |
| GTTCATTCAAACAGGGCCCC+AGG | - | chr1.1:78076693-78076712 | MS.gene71771:CDS | 55.0% | |
| TACGTAGCTCCGTGCCAAAC+GGG | - | chr1.1:78072710-78072729 | MS.gene71771:intron | 55.0% | |
| TAGTCTTCTTGCGAGGCAGG+AGG | - | chr1.1:78076832-78076851 | MS.gene71771:intron | 55.0% | |
| TCCGTGGATGCAACCAAAGG+GGG | + | chr1.1:78072880-78072899 | None:intergenic | 55.0% | |
| TTCACCTTTACTGCGGGGGA+AGG | - | chr1.1:78072415-78072434 | MS.gene71771:CDS | 55.0% | |
| !! | GGCAGAAGTATGGCTTTGGC+AGG | - | chr1.1:78076080-78076099 | MS.gene71771:intron | 55.0% |
| !! | GGCTTTGGCAGGTTGGTTCA+TGG | - | chr1.1:78076091-78076110 | MS.gene71771:intron | 55.0% |
| AGAAGAGCAGCGGCGAAACC+CGG | + | chr1.1:78077142-78077161 | None:intergenic | 60.0% | |
| AGCTCCGTGCCAAACGGGAA+TGG | - | chr1.1:78072715-78072734 | MS.gene71771:intron | 60.0% | |
| ATTGCGCGGCCTCAGGTTCA+TGG | - | chr1.1:78074094-78074113 | MS.gene71771:intron | 60.0% | |
| CTTTACTGCGGGGGAAGGAC+CGG | - | chr1.1:78072420-78072439 | MS.gene71771:CDS | 60.0% | |
| GAAGAGCCAGCCACAAGGAC+AGG | + | chr1.1:78072787-78072806 | None:intergenic | 60.0% | |
| GAAGGTCCTGTCCTTGTGGC+TGG | - | chr1.1:78072778-78072797 | MS.gene71771:intron | 60.0% | |
| GCAGGCCCAATCTACTGCTG+TGG | - | chr1.1:78076059-78076078 | MS.gene71771:intron | 60.0% | |
| GTATGAGATTGCGCGGCCTC+AGG | - | chr1.1:78074087-78074106 | MS.gene71771:intron | 60.0% | |
| CGAGGCAGGAGGGACACAAG+CGG | - | chr1.1:78076843-78076862 | MS.gene71771:intron | 65.0% | |
| CGGTCCTTCCCCCGCAGTAA+AGG | + | chr1.1:78072422-78072441 | None:intergenic | 65.0% | |
| CTGCGGGGGAAGGACCGGAA+AGG | - | chr1.1:78072425-78072444 | MS.gene71771:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 78072100 | 78077303 | 78072100 | ID=MS.gene71771 |
| chr1.1 | mRNA | 78072100 | 78077303 | 78072100 | ID=MS.gene71771.t1;Parent=MS.gene71771 |
| chr1.1 | exon | 78077213 | 78077303 | 78077213 | ID=MS.gene71771.t1.exon1;Parent=MS.gene71771.t1 |
| chr1.1 | CDS | 78077213 | 78077303 | 78077213 | ID=cds.MS.gene71771.t1;Parent=MS.gene71771.t1 |
| chr1.1 | exon | 78076957 | 78077117 | 78076957 | ID=MS.gene71771.t1.exon2;Parent=MS.gene71771.t1 |
| chr1.1 | CDS | 78076957 | 78077117 | 78076957 | ID=cds.MS.gene71771.t1;Parent=MS.gene71771.t1 |
| chr1.1 | exon | 78076170 | 78076841 | 78076170 | ID=MS.gene71771.t1.exon3;Parent=MS.gene71771.t1 |
| chr1.1 | CDS | 78076170 | 78076841 | 78076170 | ID=cds.MS.gene71771.t1;Parent=MS.gene71771.t1 |
| chr1.1 | exon | 78075054 | 78075375 | 78075054 | ID=MS.gene71771.t1.exon4;Parent=MS.gene71771.t1 |
| chr1.1 | CDS | 78075054 | 78075375 | 78075054 | ID=cds.MS.gene71771.t1;Parent=MS.gene71771.t1 |
| chr1.1 | exon | 78073638 | 78073855 | 78073638 | ID=MS.gene71771.t1.exon5;Parent=MS.gene71771.t1 |
| chr1.1 | CDS | 78073638 | 78073855 | 78073638 | ID=cds.MS.gene71771.t1;Parent=MS.gene71771.t1 |
| chr1.1 | exon | 78073163 | 78073340 | 78073163 | ID=MS.gene71771.t1.exon6;Parent=MS.gene71771.t1 |
| chr1.1 | CDS | 78073163 | 78073340 | 78073163 | ID=cds.MS.gene71771.t1;Parent=MS.gene71771.t1 |
| chr1.1 | exon | 78072100 | 78072590 | 78072100 | ID=MS.gene71771.t1.exon7;Parent=MS.gene71771.t1 |
| chr1.1 | CDS | 78072100 | 78072590 | 78072100 | ID=cds.MS.gene71771.t1;Parent=MS.gene71771.t1 |
| Gene Sequence |
| Protein sequence |
