Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72653.t1 | XP_003612362.1 | 99.1 | 113 | 1 | 0 | 1 | 113 | 1 | 113 | 6.30E-53 | 216.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72653.t1 | P40619 | 63.5 | 96 | 34 | 1 | 11 | 105 | 10 | 105 | 1.9e-26 | 120.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72653.t1 | G7K181 | 99.1 | 113 | 1 | 0 | 1 | 113 | 1 | 113 | 4.6e-53 | 216.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene72653.t1 | TR | HMG |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049989 | MS.gene72653 | 0.810388 | 1.18E-50 | -1.69E-46 |
| MS.gene052308 | MS.gene72653 | 0.813966 | 1.96E-51 | -1.69E-46 |
| MS.gene053348 | MS.gene72653 | 0.821615 | 3.67E-53 | -1.69E-46 |
| MS.gene054551 | MS.gene72653 | 0.820918 | 5.32E-53 | -1.69E-46 |
| MS.gene054593 | MS.gene72653 | 0.808417 | 3.13E-50 | -1.69E-46 |
| MS.gene055308 | MS.gene72653 | 0.832793 | 7.72E-56 | -1.69E-46 |
| MS.gene055578 | MS.gene72653 | 0.832308 | 1.02E-55 | -1.69E-46 |
| MS.gene055579 | MS.gene72653 | 0.802155 | 6.42E-49 | -1.69E-46 |
| MS.gene055957 | MS.gene72653 | 0.882464 | 1.02E-70 | -1.69E-46 |
| MS.gene056041 | MS.gene72653 | 0.853025 | 3.14E-61 | -1.69E-46 |
| MS.gene056042 | MS.gene72653 | 0.842213 | 2.97E-58 | -1.69E-46 |
| MS.gene056335 | MS.gene72653 | 0.807534 | 4.82E-50 | -1.69E-46 |
| MS.gene05640 | MS.gene72653 | 0.814536 | 1.47E-51 | -1.69E-46 |
| MS.gene057458 | MS.gene72653 | 0.843012 | 1.82E-58 | -1.69E-46 |
| MS.gene058128 | MS.gene72653 | 0.848856 | 4.69E-60 | -1.69E-46 |
| MS.gene058853 | MS.gene72653 | 0.819658 | 1.03E-52 | -1.69E-46 |
| MS.gene060473 | MS.gene72653 | 0.816245 | 6.11E-52 | -1.69E-46 |
| MS.gene060565 | MS.gene72653 | 0.809827 | 1.56E-50 | -1.69E-46 |
| MS.gene06093 | MS.gene72653 | 0.814053 | 1.87E-51 | -1.69E-46 |
| MS.gene061099 | MS.gene72653 | 0.835555 | 1.57E-56 | -1.69E-46 |
| MS.gene061260 | MS.gene72653 | 0.808527 | 2.96E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72653.t1 | MTR_5g024180 | 96.825 | 126 | 4 | 0 | 1 | 126 | 1 | 126 | 4.02e-83 | 240 |
| MS.gene72653.t1 | MTR_8g073345 | 66.935 | 124 | 38 | 2 | 1 | 123 | 1 | 122 | 1.11e-50 | 158 |
| MS.gene72653.t1 | MTR_8g073345 | 66.935 | 124 | 38 | 2 | 1 | 123 | 1 | 122 | 1.62e-50 | 158 |
| MS.gene72653.t1 | MTR_5g024180 | 94.048 | 84 | 2 | 1 | 43 | 123 | 3 | 86 | 2.81e-48 | 151 |
| MS.gene72653.t1 | MTR_3g115580 | 60.952 | 105 | 33 | 2 | 6 | 105 | 13 | 114 | 1.59e-34 | 118 |
| MS.gene72653.t1 | MTR_7g068280 | 67.568 | 74 | 24 | 0 | 32 | 105 | 47 | 120 | 1.27e-29 | 105 |
| MS.gene72653.t1 | MTR_7g082820 | 64.557 | 79 | 26 | 2 | 28 | 105 | 4 | 81 | 1.43e-27 | 100 |
| MS.gene72653.t1 | MTR_1g115220 | 47.423 | 97 | 49 | 1 | 32 | 128 | 98 | 192 | 9.80e-25 | 94.7 |
| MS.gene72653.t1 | MTR_4g094622 | 38.272 | 81 | 50 | 0 | 25 | 105 | 53 | 133 | 6.38e-15 | 67.8 |
| MS.gene72653.t1 | MTR_0405s0060 | 94.118 | 34 | 2 | 0 | 82 | 115 | 74 | 107 | 2.32e-14 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72653.t1 | AT1G20693 | 63.810 | 105 | 34 | 2 | 18 | 122 | 23 | 123 | 3.11e-36 | 122 |
| MS.gene72653.t1 | AT1G20693 | 63.810 | 105 | 34 | 2 | 18 | 122 | 23 | 123 | 4.12e-36 | 121 |
| MS.gene72653.t1 | AT1G20693 | 63.810 | 105 | 34 | 2 | 18 | 122 | 23 | 123 | 4.24e-36 | 121 |
| MS.gene72653.t1 | AT1G20696 | 65.591 | 93 | 31 | 1 | 30 | 122 | 29 | 120 | 4.41e-35 | 119 |
| MS.gene72653.t1 | AT2G17560 | 48.462 | 130 | 64 | 1 | 6 | 135 | 8 | 134 | 8.77e-35 | 118 |
| MS.gene72653.t1 | AT2G17560 | 48.462 | 130 | 64 | 1 | 6 | 135 | 8 | 134 | 8.77e-35 | 118 |
| MS.gene72653.t1 | AT2G17560 | 51.695 | 118 | 54 | 1 | 6 | 123 | 8 | 122 | 1.53e-34 | 117 |
| MS.gene72653.t1 | AT1G20696 | 72.368 | 76 | 21 | 0 | 30 | 105 | 29 | 104 | 2.23e-34 | 117 |
| MS.gene72653.t1 | AT1G20696 | 72.368 | 76 | 21 | 0 | 30 | 105 | 29 | 104 | 4.29e-34 | 116 |
| MS.gene72653.t1 | AT3G51880 | 50.355 | 141 | 54 | 5 | 9 | 141 | 18 | 150 | 1.47e-31 | 111 |
| MS.gene72653.t1 | AT3G51880 | 53.226 | 124 | 43 | 4 | 9 | 124 | 18 | 134 | 3.71e-31 | 109 |
| MS.gene72653.t1 | AT3G51880 | 53.226 | 124 | 43 | 4 | 9 | 124 | 18 | 134 | 7.05e-31 | 109 |
| MS.gene72653.t1 | AT3G51880 | 53.226 | 124 | 43 | 4 | 9 | 124 | 18 | 134 | 7.05e-31 | 109 |
| MS.gene72653.t1 | AT3G51880 | 53.226 | 124 | 43 | 4 | 9 | 124 | 18 | 134 | 7.05e-31 | 109 |
| MS.gene72653.t1 | AT4G35570 | 45.763 | 118 | 58 | 2 | 7 | 122 | 9 | 122 | 1.31e-29 | 104 |
| MS.gene72653.t1 | AT4G35570 | 45.763 | 118 | 58 | 2 | 7 | 122 | 9 | 122 | 1.31e-29 | 104 |
| MS.gene72653.t1 | AT1G20696 | 48.980 | 98 | 34 | 2 | 44 | 125 | 1 | 98 | 1.01e-21 | 83.6 |
| MS.gene72653.t1 | AT1G20696 | 55.696 | 79 | 34 | 1 | 44 | 122 | 1 | 78 | 1.25e-21 | 83.6 |
| MS.gene72653.t1 | AT5G23420 | 49.275 | 69 | 32 | 2 | 34 | 101 | 113 | 179 | 1.34e-13 | 65.9 |
| MS.gene72653.t1 | AT2G34450 | 35.714 | 70 | 45 | 0 | 36 | 105 | 63 | 132 | 9.14e-13 | 62.0 |
| MS.gene72653.t1 | AT2G34450 | 35.714 | 70 | 45 | 0 | 36 | 105 | 63 | 132 | 9.14e-13 | 62.0 |
| MS.gene72653.t1 | AT2G34450 | 35.714 | 70 | 45 | 0 | 36 | 105 | 63 | 132 | 9.14e-13 | 62.0 |
| MS.gene72653.t1 | AT4G23800 | 49.315 | 73 | 34 | 1 | 32 | 104 | 251 | 320 | 1.47e-12 | 63.9 |
| MS.gene72653.t1 | AT4G23800 | 41.892 | 74 | 42 | 1 | 32 | 105 | 375 | 447 | 1.10e-11 | 61.6 |
| MS.gene72653.t1 | AT4G23800 | 49.315 | 73 | 34 | 1 | 32 | 104 | 251 | 320 | 1.61e-12 | 63.9 |
| MS.gene72653.t1 | AT4G23800 | 41.892 | 74 | 42 | 1 | 32 | 105 | 369 | 441 | 1.15e-11 | 61.6 |
| MS.gene72653.t1 | AT2G34450 | 36.620 | 71 | 44 | 1 | 36 | 105 | 63 | 133 | 2.94e-12 | 60.8 |
| MS.gene72653.t1 | AT4G11080 | 46.575 | 73 | 36 | 1 | 32 | 104 | 242 | 311 | 1.65e-11 | 60.8 |
Find 36 sgRNAs with CRISPR-Local
Find 62 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACAATGCGTGCTTACAATA+TGG | 0.281097 | 5.4:+15577129 | MS.gene72653:CDS |
| GGAGGCCTCTTAGGCTTGTT+AGG | 0.297257 | 5.4:-15576540 | None:intergenic |
| AAAGCACTTGGAGGCCTCTT+AGG | 0.299005 | 5.4:-15576549 | None:intergenic |
| TTGAATTAGGTTGGGAAAGC+TGG | 0.350890 | 5.4:+15576925 | MS.gene72653:intron |
| AAGCGCAAGGGCGCTGGTAC+TGG | 0.369054 | 5.4:+15576489 | MS.gene72653:CDS |
| AGGAGGATGAGGAGTAAAGT+TGG | 0.417672 | 5.4:+15577428 | MS.gene72653:CDS |
| TTATCAGCCTTAGCATTGAA+TGG | 0.428927 | 5.4:-15577085 | None:intergenic |
| ACAGCAACGGACTTGTTGCT+TGG | 0.433440 | 5.4:-15576815 | None:intergenic |
| TTAGCATCGGAAACAGCTTT+CGG | 0.437399 | 5.4:-15576350 | None:intergenic |
| ATGCTAAACCTGCTGATAAC+CGG | 0.456641 | 5.4:+15576366 | MS.gene72653:CDS |
| ACAATGCGTGCTTACAATAT+GGG | 0.459061 | 5.4:+15577130 | MS.gene72653:CDS |
| AGTAAAGTTGGTGGTGCTGA+AGG | 0.482862 | 5.4:+15577440 | MS.gene72653:CDS |
| TGCTAAGGCTGATAAGTTGA+AGG | 0.485540 | 5.4:+15577093 | MS.gene72653:CDS |
| GAATCTCACCGGTTATCAGC+AGG | 0.496399 | 5.4:-15576374 | None:intergenic |
| GTTCAGAGAGAGGTTTAAGA+AGG | 0.508587 | 5.4:+15576787 | MS.gene72653:CDS |
| GGAAAGCTGGTGGAAAGGAA+TGG | 0.519414 | 5.4:+15576938 | MS.gene72653:CDS |
| AGGTTGAAGCGCAAGGGCGC+TGG | 0.524589 | 5.4:+15576483 | MS.gene72653:intron |
| GTTTGTTAGGTTGAAGCGCA+AGG | 0.526395 | 5.4:+15576476 | MS.gene72653:intron |
| AAGAATGCTTCTGAGGAAGA+AGG | 0.530721 | 5.4:+15577265 | MS.gene72653:CDS |
| AATTAGGTTGGGAAAGCTGG+TGG | 0.535794 | 5.4:+15576928 | MS.gene72653:intron |
| AGGATCCTAACAAGCCTAAG+AGG | 0.536126 | 5.4:+15576535 | MS.gene72653:CDS |
| GGTTGGGAAAGCTGGTGGAA+AGG | 0.549667 | 5.4:+15576933 | MS.gene72653:intron |
| AAAACGAAGAAAGCACTTGG+AGG | 0.557236 | 5.4:-15576558 | None:intergenic |
| TTTGTTAGGTTGAAGCGCAA+GGG | 0.561375 | 5.4:+15576477 | MS.gene72653:intron |
| TAAGGCTCCATTCAATGCTA+AGG | 0.574542 | 5.4:+15577078 | MS.gene72653:CDS |
| AGGATGAGGAGTAAAGTTGG+TGG | 0.574604 | 5.4:+15577431 | MS.gene72653:CDS |
| GACTGAGAAGAATGCTTCTG+AGG | 0.577758 | 5.4:+15577258 | MS.gene72653:intron |
| ATGAAAACGAAGAAAGCACT+TGG | 0.589018 | 5.4:-15576561 | None:intergenic |
| AAGCAACAAGTCCGTTGCTG+TGG | 0.608709 | 5.4:+15576817 | MS.gene72653:CDS |
| TAAGCAATCGAAGAAAGCTA+AGG | 0.615519 | 5.4:+15576515 | MS.gene72653:CDS |
| GTTATCAGCAGGTTTAGCAT+CGG | 0.618036 | 5.4:-15576363 | None:intergenic |
| GGTGCTGAAGGAAGAAGCGT+AGG | 0.622139 | 5.4:+15577452 | MS.gene72653:CDS |
| TTAGGTCTGAGTTCAGAGAG+AGG | 0.622758 | 5.4:+15576777 | MS.gene72653:intron |
| CAGAAATCTCACCACAGCAA+CGG | 0.627421 | 5.4:-15576828 | None:intergenic |
| ATCGGAAACAGCTTTCGGCA+TGG | 0.634546 | 5.4:-15576345 | None:intergenic |
| TAAGGCTGATAAGTTGAAGG+AGG | 0.688265 | 5.4:+15577096 | MS.gene72653:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTATTATTCTATAATTTTTT+AGG | + | chr5.4:15577361-15577380 | MS.gene72653:intron | 10.0% |
| !!! | TTTCATTATTTTATGTTTTC+AGG | + | chr5.4:15577405-15577424 | MS.gene72653:intron | 15.0% |
| !!! | TTTTTGATTTTTTGTTTGTT+AGG | + | chr5.4:15576463-15576482 | MS.gene72653:intron | 15.0% |
| !!! | ATTTTTGTTTTGCGTTTTTT+AGG | + | chr5.4:15576759-15576778 | MS.gene72653:intron | 20.0% |
| !!! | TTGTGATTTATGTGTATTTT+AGG | + | chr5.4:15577054-15577073 | MS.gene72653:intron | 20.0% |
| !!! | TTTATGTGTATTTTAGGATA+AGG | + | chr5.4:15577060-15577079 | MS.gene72653:intron | 20.0% |
| ! | AGAATCAAATCAAACTTCAA+CGG | - | chr5.4:15576735-15576754 | None:intergenic | 25.0% |
| !! | CTAAATCTTAAATAGCGTTT+TGG | + | chr5.4:15577017-15577036 | MS.gene72653:intron | 25.0% |
| !! | TCTAACGTGATTTTTGAATT+AGG | + | chr5.4:15576912-15576931 | MS.gene72653:intron | 25.0% |
| !! | TTGCTGAATTGAACTAATTT+TGG | + | chr5.4:15577228-15577247 | MS.gene72653:intron | 25.0% |
| !!! | CATTATTTTATGTTTTCAGG+AGG | + | chr5.4:15577408-15577427 | MS.gene72653:intron | 25.0% |
| CCAAAACTCAATAAACGAAA+AGG | - | chr5.4:15576685-15576704 | None:intergenic | 30.0% | |
| ! | ACGTGATTTTTGAATTAGGT+TGG | + | chr5.4:15576916-15576935 | MS.gene72653:intron | 30.0% |
| ! | CCTTTTCGTTTATTGAGTTT+TGG | + | chr5.4:15576682-15576701 | MS.gene72653:intron | 30.0% |
| ! | CGTGATTTTTGAATTAGGTT+GGG | + | chr5.4:15576917-15576936 | MS.gene72653:intron | 30.0% |
| ! | CTTCGTTTTCATGTAAGATT+CGG | + | chr5.4:15576572-15576591 | MS.gene72653:intron | 30.0% |
| ! | TTCACTGTTCTGATTTTACT+CGG | + | chr5.4:15577194-15577213 | MS.gene72653:intron | 30.0% |
| !! | TATTTTATGTTTTCAGGAGG+AGG | + | chr5.4:15577411-15577430 | MS.gene72653:intron | 30.0% |
| ACAATGCGTGCTTACAATAT+GGG | + | chr5.4:15577130-15577149 | MS.gene72653:CDS | 35.0% | |
| ATCATCATTCACTTCAGACT+TGG | - | chr5.4:15577302-15577321 | None:intergenic | 35.0% | |
| GTGCTAAAAGTTGTTCGAAT+CGG | + | chr5.4:15576594-15576613 | MS.gene72653:intron | 35.0% | |
| TAAGCAATCGAAGAAAGCTA+AGG | + | chr5.4:15576515-15576534 | MS.gene72653:CDS | 35.0% | |
| ! | TGAAGTGAATGATGATGATG+AGG | + | chr5.4:15577306-15577325 | MS.gene72653:intron | 35.0% |
| ! | TTATCAGCCTTAGCATTGAA+TGG | - | chr5.4:15577088-15577107 | None:intergenic | 35.0% |
| !! | ATGAAAACGAAGAAAGCACT+TGG | - | chr5.4:15576564-15576583 | None:intergenic | 35.0% |
| AGAATCACGAATCTCGAAGT+CGG | - | chr5.4:15576405-15576424 | None:intergenic | 40.0% | |
| ATGCTAAACCTGCTGATAAC+CGG | + | chr5.4:15576366-15576385 | MS.gene72653:CDS | 40.0% | |
| GACAATGCGTGCTTACAATA+TGG | + | chr5.4:15577129-15577148 | MS.gene72653:CDS | 40.0% | |
| GTTATCAGCAGGTTTAGCAT+CGG | - | chr5.4:15576366-15576385 | None:intergenic | 40.0% | |
| GTTCAGAGAGAGGTTTAAGA+AGG | + | chr5.4:15576787-15576806 | MS.gene72653:CDS | 40.0% | |
| TAAGGCTCCATTCAATGCTA+AGG | + | chr5.4:15577078-15577097 | MS.gene72653:CDS | 40.0% | |
| TCGAGATTCGTGATTCTCAT+CGG | + | chr5.4:15576408-15576427 | MS.gene72653:intron | 40.0% | |
| ! | AAGAATGCTTCTGAGGAAGA+AGG | + | chr5.4:15577265-15577284 | MS.gene72653:CDS | 40.0% |
| ! | GTGAATGATGATGATGAGGA+TGG | + | chr5.4:15577310-15577329 | MS.gene72653:intron | 40.0% |
| ! | TAAGGCTGATAAGTTGAAGG+AGG | + | chr5.4:15577096-15577115 | MS.gene72653:CDS | 40.0% |
| ! | TGCTAAGGCTGATAAGTTGA+AGG | + | chr5.4:15577093-15577112 | MS.gene72653:CDS | 40.0% |
| ! | TTAGCATCGGAAACAGCTTT+CGG | - | chr5.4:15576353-15576372 | None:intergenic | 40.0% |
| !! | AAAACGAAGAAAGCACTTGG+AGG | - | chr5.4:15576561-15576580 | None:intergenic | 40.0% |
| !! | TTGAATTAGGTTGGGAAAGC+TGG | + | chr5.4:15576925-15576944 | MS.gene72653:intron | 40.0% |
| !! | TTTGTTAGGTTGAAGCGCAA+GGG | + | chr5.4:15576477-15576496 | MS.gene72653:intron | 40.0% |
| AGGAGGATGAGGAGTAAAGT+TGG | + | chr5.4:15577428-15577447 | MS.gene72653:CDS | 45.0% | |
| AGGATCCTAACAAGCCTAAG+AGG | + | chr5.4:15576535-15576554 | MS.gene72653:CDS | 45.0% | |
| AGGATGAGGAGTAAAGTTGG+TGG | + | chr5.4:15577431-15577450 | MS.gene72653:CDS | 45.0% | |
| AGTCGGAAGAAGAATCTCAC+CGG | - | chr5.4:15576388-15576407 | None:intergenic | 45.0% | |
| CAGAAATCTCACCACAGCAA+CGG | - | chr5.4:15576831-15576850 | None:intergenic | 45.0% | |
| GACTGAGAAGAATGCTTCTG+AGG | + | chr5.4:15577258-15577277 | MS.gene72653:intron | 45.0% | |
| TTAGGTCTGAGTTCAGAGAG+AGG | + | chr5.4:15576777-15576796 | MS.gene72653:intron | 45.0% | |
| !! | AATTAGGTTGGGAAAGCTGG+TGG | + | chr5.4:15576928-15576947 | MS.gene72653:intron | 45.0% |
| !! | AGTAAAGTTGGTGGTGCTGA+AGG | + | chr5.4:15577440-15577459 | MS.gene72653:CDS | 45.0% |
| !! | ATGTTTTCAGGAGGAGGATG+AGG | + | chr5.4:15577417-15577436 | MS.gene72653:intron | 45.0% |
| !! | GTTTGTTAGGTTGAAGCGCA+AGG | + | chr5.4:15576476-15576495 | MS.gene72653:intron | 45.0% |
| AAGCAACAAGTCCGTTGCTG+TGG | + | chr5.4:15576817-15576836 | MS.gene72653:CDS | 50.0% | |
| AAGCTCTGTCTGATGCTGTG+AGG | + | chr5.4:15576962-15576981 | MS.gene72653:intron | 50.0% | |
| GGAAAGCTGGTGGAAAGGAA+TGG | + | chr5.4:15576938-15576957 | MS.gene72653:CDS | 50.0% | |
| ! | AAAGCACTTGGAGGCCTCTT+AGG | - | chr5.4:15576552-15576571 | None:intergenic | 50.0% |
| ! | GAATCTCACCGGTTATCAGC+AGG | - | chr5.4:15576377-15576396 | None:intergenic | 50.0% |
| !! | ACAGCAACGGACTTGTTGCT+TGG | - | chr5.4:15576818-15576837 | None:intergenic | 50.0% |
| GGTTGGGAAAGCTGGTGGAA+AGG | + | chr5.4:15576933-15576952 | MS.gene72653:intron | 55.0% | |
| ! | GGAGGCCTCTTAGGCTTGTT+AGG | - | chr5.4:15576543-15576562 | None:intergenic | 55.0% |
| ! | GGTGCTGAAGGAAGAAGCGT+AGG | + | chr5.4:15577452-15577471 | MS.gene72653:CDS | 55.0% |
| ! | AGGTTGAAGCGCAAGGGCGC+TGG | + | chr5.4:15576483-15576502 | MS.gene72653:intron | 65.0% |
| !! | AAGCGCAAGGGCGCTGGTAC+TGG | + | chr5.4:15576489-15576508 | MS.gene72653:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 15576347 | 15577493 | 15576347 | ID=MS.gene72653 |
| chr5.4 | mRNA | 15576347 | 15577493 | 15576347 | ID=MS.gene72653.t1;Parent=MS.gene72653 |
| chr5.4 | exon | 15576347 | 15576387 | 15576347 | ID=MS.gene72653.t1.exon1;Parent=MS.gene72653.t1 |
| chr5.4 | CDS | 15576347 | 15576387 | 15576347 | ID=cds.MS.gene72653.t1;Parent=MS.gene72653.t1 |
| chr5.4 | exon | 15576485 | 15576583 | 15576485 | ID=MS.gene72653.t1.exon2;Parent=MS.gene72653.t1 |
| chr5.4 | CDS | 15576485 | 15576583 | 15576485 | ID=cds.MS.gene72653.t1;Parent=MS.gene72653.t1 |
| chr5.4 | exon | 15576781 | 15576838 | 15576781 | ID=MS.gene72653.t1.exon3;Parent=MS.gene72653.t1 |
| chr5.4 | CDS | 15576781 | 15576838 | 15576781 | ID=cds.MS.gene72653.t1;Parent=MS.gene72653.t1 |
| chr5.4 | exon | 15576934 | 15576978 | 15576934 | ID=MS.gene72653.t1.exon4;Parent=MS.gene72653.t1 |
| chr5.4 | CDS | 15576934 | 15576978 | 15576934 | ID=cds.MS.gene72653.t1;Parent=MS.gene72653.t1 |
| chr5.4 | exon | 15577076 | 15577156 | 15577076 | ID=MS.gene72653.t1.exon5;Parent=MS.gene72653.t1 |
| chr5.4 | CDS | 15577076 | 15577156 | 15577076 | ID=cds.MS.gene72653.t1;Parent=MS.gene72653.t1 |
| chr5.4 | exon | 15577259 | 15577302 | 15577259 | ID=MS.gene72653.t1.exon6;Parent=MS.gene72653.t1 |
| chr5.4 | CDS | 15577259 | 15577302 | 15577259 | ID=cds.MS.gene72653.t1;Parent=MS.gene72653.t1 |
| chr5.4 | exon | 15577427 | 15577493 | 15577427 | ID=MS.gene72653.t1.exon7;Parent=MS.gene72653.t1 |
| chr5.4 | CDS | 15577427 | 15577493 | 15577427 | ID=cds.MS.gene72653.t1;Parent=MS.gene72653.t1 |
| Gene Sequence |
| Protein sequence |
