AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene74134


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene74134.t1 MTR_7g025630 77.394 376 82 2 1 375 231 604 0.0 576
MS.gene74134.t1 MTR_8g032650 72.178 381 103 2 1 380 245 623 0.0 544
MS.gene74134.t1 MTR_7g026030 70.866 381 108 2 1 380 245 623 0.0 543
MS.gene74134.t1 MTR_7g025720 72.340 376 101 2 1 375 245 618 0.0 542
MS.gene74134.t1 MTR_7g025760 69.761 377 110 2 1 375 245 619 0.0 531
MS.gene74134.t1 MTR_7g078210 67.460 378 119 3 1 375 245 621 2.86e-178 510
MS.gene74134.t1 MTR_7g078190 68.074 379 117 3 1 376 246 623 8.67e-178 509
MS.gene74134.t1 MTR_7g025790 68.901 373 113 2 1 372 245 615 8.75e-177 506
MS.gene74134.t1 MTR_7g025260 65.183 382 129 2 1 380 217 596 2.74e-175 501
MS.gene74134.t1 MTR_7g025740 65.316 395 127 4 1 385 245 639 3.45e-173 498
MS.gene74134.t1 MTR_7g025620 66.216 370 122 2 1 369 245 612 3.93e-168 484
MS.gene74134.t1 MTR_7g024030 66.216 370 122 2 1 369 245 612 1.38e-164 475
MS.gene74134.t1 MTR_7g025820 64.773 352 120 2 1 350 245 594 6.05e-158 457
MS.gene74134.t1 MTR_4g063720 60.326 368 140 5 1 364 243 608 9.77e-149 436
MS.gene74134.t1 MTR_4g063710 60.326 368 140 5 1 364 243 608 3.44e-148 434
MS.gene74134.t1 MTR_7g099680 57.662 385 157 5 1 381 243 625 1.63e-146 430
MS.gene74134.t1 MTR_7g024580 57.743 381 155 5 1 377 243 621 1.76e-146 430
MS.gene74134.t1 MTR_7g024390 59.563 366 142 5 1 362 243 606 1.92e-145 427
MS.gene74134.t1 MTR_8g103930 57.487 374 155 3 1 372 242 613 5.26e-141 414
MS.gene74134.t1 MTR_7g021440 57.724 369 152 3 1 367 245 611 6.62e-141 414
MS.gene74134.t1 MTR_7g026110 55.108 372 164 2 1 371 244 613 2.17e-140 413
MS.gene74134.t1 MTR_4g130540 55.906 381 162 5 1 377 242 620 1.60e-139 412
MS.gene74134.t1 MTR_2g022050 57.867 375 152 4 1 371 245 617 3.60e-139 410
MS.gene74134.t1 MTR_2g032550 57.029 377 156 5 1 373 246 620 2.37e-138 408
MS.gene74134.t1 MTR_5g066800 56.568 373 158 3 1 371 256 626 2.91e-138 408
MS.gene74134.t1 MTR_7g011590 58.543 357 145 2 1 356 233 587 1.08e-136 403
MS.gene74134.t1 MTR_2g038270 56.757 370 154 5 1 366 253 620 2.78e-134 398
MS.gene74134.t1 MTR_7g451380 55.200 375 162 4 1 371 245 617 8.59e-134 396
MS.gene74134.t1 MTR_7g025770 55.827 369 158 4 1 366 245 611 1.04e-133 396
MS.gene74134.t1 MTR_2g038260 56.150 374 157 6 2 371 246 616 1.36e-132 393
MS.gene74134.t1 MTR_7g026090 56.873 371 154 4 1 369 245 611 1.13e-131 390
MS.gene74134.t1 MTR_7g026140 54.324 370 162 5 1 366 229 595 2.50e-127 380
MS.gene74134.t1 MTR_1g041565 53.930 369 148 4 1 366 188 537 3.01e-127 377
MS.gene74134.t1 MTR_4g079590 55.068 365 159 4 1 362 245 607 5.54e-127 379
MS.gene74134.t1 MTR_7g029415 54.255 376 166 4 1 373 252 624 2.37e-126 377
MS.gene74134.t1 MTR_7g026050 52.973 370 141 5 1 366 1 341 2.20e-125 365
MS.gene74134.t1 MTR_4g027145 55.840 351 151 3 1 349 257 605 2.50e-124 372
MS.gene74134.t1 MTR_2g437440 54.521 376 145 6 1 371 245 599 6.85e-124 370
MS.gene74134.t1 MTR_7g026170 53.476 374 169 4 1 371 245 616 7.89e-124 371
MS.gene74134.t1 MTR_4g063720 59.688 320 123 5 49 364 220 537 9.58e-124 369
MS.gene74134.t1 MTR_7g074460 56.213 338 144 2 38 373 264 599 2.44e-123 369
MS.gene74134.t1 MTR_7g026130 54.891 368 156 4 1 361 245 609 9.76e-118 358
MS.gene74134.t1 MTR_1g017130 51.902 368 134 4 1 366 245 571 1.46e-115 348
MS.gene74134.t1 MTR_2g032580 51.596 376 143 7 1 371 245 586 2.08e-114 345
MS.gene74134.t1 MTR_7g451360 48.421 380 158 5 1 376 215 560 9.54e-112 338
MS.gene74134.t1 MTR_6g033800 49.062 373 185 4 1 371 154 523 2.79e-111 337
MS.gene74134.t1 MTR_6g033850 49.198 374 185 4 1 371 243 614 4.32e-111 340
MS.gene74134.t1 MTR_6g033870 48.731 394 190 5 1 384 245 636 2.37e-109 335
MS.gene74134.t1 MTR_6g033760 49.864 367 176 5 1 361 243 607 2.01e-108 331
MS.gene74134.t1 MTR_6g033820 45.939 394 201 5 1 384 243 634 2.29e-104 322
MS.gene74134.t1 MTR_7g007000 48.378 370 160 6 1 366 227 569 3.70e-104 319
MS.gene74134.t1 MTR_6g033955 50.437 343 160 5 1 335 243 583 3.34e-102 316
MS.gene74134.t1 MTR_8g099795 47.443 352 178 6 1 347 269 618 9.31e-102 315
MS.gene74134.t1 MTR_8g099945 47.159 352 179 6 1 347 269 618 4.69e-101 313
MS.gene74134.t1 MTR_2g017730 48.538 342 158 8 1 332 242 575 1.81e-95 297
MS.gene74134.t1 MTR_1g077240 52.189 297 130 5 78 371 1 288 3.92e-83 255
MS.gene74134.t1 MTR_7g035155 42.287 376 158 7 1 373 245 564 1.75e-75 244
MS.gene74134.t1 MTR_6g034005 42.857 350 174 8 1 336 163 500 2.39e-74 244
MS.gene74134.t1 MTR_6g033810 60.694 173 67 1 1 172 119 291 1.78e-67 215
MS.gene74134.t1 MTR_2g010020 41.176 323 176 9 1 316 282 597 1.29e-65 221
MS.gene74134.t1 MTR_2g010020 41.176 323 176 9 1 316 281 596 1.31e-65 221
MS.gene74134.t1 MTR_4g092920 41.176 323 176 9 1 316 145 460 1.48e-65 218
MS.gene74134.t1 MTR_4g092920 41.176 323 176 9 1 316 279 594 2.12e-64 218
MS.gene74134.t1 MTR_2g005690 37.640 356 206 10 1 349 298 644 4.40e-64 217
MS.gene74134.t1 MTR_2g040160 66.242 157 52 1 1 156 1341 1497 4.15e-61 213
MS.gene74134.t1 MTR_2g040220 60.571 175 60 2 1 166 1254 1428 2.13e-60 211
MS.gene74134.t1 MTR_2g040260 65.605 157 53 1 1 156 1270 1426 4.32e-59 207
MS.gene74134.t1 MTR_6g033855 47.727 220 76 3 1 220 119 299 1.79e-57 190
MS.gene74134.t1 MTR_2g040370 63.816 152 55 0 1 152 1261 1412 5.07e-57 201
MS.gene74134.t1 MTR_2g040370 62.914 151 56 0 1 151 1646 1796 4.63e-49 178
MS.gene74134.t1 MTR_2g040370 63.816 152 55 0 1 152 1261 1412 5.21e-57 201
MS.gene74134.t1 MTR_2g040370 64.138 145 52 0 1 145 1646 1790 3.28e-48 176
MS.gene74134.t1 MTR_2g032160 64.885 131 46 0 1 131 245 375 6.61e-54 185
MS.gene74134.t1 MTR_2g040350 60.510 157 61 1 1 156 1274 1430 2.56e-52 187
MS.gene74134.t1 MTR_2g040350 60.510 157 61 1 1 156 1056 1212 2.58e-52 187
MS.gene74134.t1 MTR_1g116250 41.762 261 109 6 104 362 60 279 1.76e-48 166
MS.gene74134.t1 MTR_5g005870 38.246 285 160 9 47 323 61 337 5.54e-48 168
MS.gene74134.t1 MTR_4g088515 76.190 105 25 0 89 193 515 619 2.98e-46 167
MS.gene74134.t1 MTR_7g074540 41.089 202 115 2 173 372 1 200 7.36e-43 148
MS.gene74134.t1 MTR_7g451390 40.678 177 99 3 203 376 18 191 9.63e-33 121
MS.gene74134.t1 MTR_5g006180 32.432 259 145 9 1 250 270 507 4.78e-28 115
MS.gene74134.t1 MTR_4g115780 35.270 241 150 5 22 259 413 650 2.58e-26 111
MS.gene74134.t1 MTR_1g068900 44.030 134 74 1 183 315 23 156 3.05e-26 103
MS.gene74134.t1 MTR_2g031670 87.931 58 7 0 108 165 283 340 3.24e-26 108
MS.gene74134.t1 MTR_7g026190 55.319 94 33 2 44 137 9 93 8.63e-26 103
MS.gene74134.t1 MTR_7g026190 47.887 71 37 0 254 324 94 164 2.23e-13 68.9
MS.gene74134.t1 MTR_4g107920 36.548 197 116 8 61 252 314 506 9.39e-25 106
MS.gene74134.t1 MTR_3g081170 36.424 151 94 1 1 149 274 424 3.91e-24 105
MS.gene74134.t1 MTR_5g090110 33.953 215 126 7 22 231 274 477 4.52e-24 103
MS.gene74134.t1 MTR_3g051300 26.005 423 242 15 1 362 238 650 4.54e-23 101
MS.gene74134.t1 MTR_5g092570 23.182 440 258 13 1 371 238 666 8.33e-22 97.8
MS.gene74134.t1 MTR_7g026180 33.180 217 113 4 157 371 143 329 2.92e-21 94.0
MS.gene74134.t1 MTR_2g102180 28.922 204 131 4 1 192 238 439 9.09e-20 91.7
MS.gene74134.t1 MTR_4g012050 28.431 204 132 3 1 192 238 439 1.22e-18 88.2
MS.gene74134.t1 MTR_2g017710 37.121 132 51 2 61 191 70 170 9.52e-17 80.1
MS.gene74134.t1 MTR_7g026095 38.636 88 54 0 238 325 256 343 1.11e-13 72.0
MS.gene74134.t1 MTR_6g033815 56.140 57 25 0 280 336 1 57 1.57e-12 63.9
MS.gene74134.t1 MTR_6g478100 37.895 95 58 1 271 364 208 302 2.49e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene74134.t1 AT3G12580 58.575 379 151 5 1 375 243 619 3.45e-149 437
MS.gene74134.t1 AT5G02500 58.696 368 146 5 1 364 243 608 3.04e-145 427
MS.gene74134.t1 AT5G02490 57.609 368 150 5 1 364 243 608 1.74e-141 417
MS.gene74134.t1 AT1G16030 55.906 381 162 5 1 377 242 620 8.29e-140 412
MS.gene74134.t1 AT3G09440 57.609 368 150 5 1 364 243 608 2.06e-139 412
MS.gene74134.t1 AT3G09440 57.609 368 150 5 1 364 243 608 2.06e-139 412
MS.gene74134.t1 AT3G09440 57.609 368 150 5 1 364 243 608 2.06e-139 412
MS.gene74134.t1 AT3G09440 57.609 368 150 5 1 364 243 608 2.06e-139 412
MS.gene74134.t1 AT1G56410 54.881 379 163 6 1 375 243 617 1.26e-132 393
MS.gene74134.t1 AT5G28540 48.509 369 183 6 1 364 268 634 8.12e-109 333
MS.gene74134.t1 AT5G42020 48.238 369 184 6 1 364 268 634 1.07e-107 331
MS.gene74134.t1 AT5G42020 48.238 369 184 6 1 364 273 639 2.84e-107 330
MS.gene74134.t1 AT1G09080 44.920 374 199 5 4 372 275 646 3.09e-91 288
MS.gene74134.t1 AT1G09080 45.902 366 191 5 4 364 285 648 3.32e-91 288
MS.gene74134.t1 AT5G42020 50.000 234 113 3 1 232 268 499 8.01e-69 228
MS.gene74134.t1 AT5G02500 72.414 145 40 0 1 145 243 387 1.20e-68 225
MS.gene74134.t1 AT5G02500 39.785 93 56 0 272 364 386 478 1.43e-13 72.4
MS.gene74134.t1 AT5G49910 36.269 386 229 11 1 378 307 683 2.23e-63 216
MS.gene74134.t1 AT4G24280 39.752 322 180 9 1 315 307 621 8.30e-63 214
MS.gene74134.t1 AT5G09590 39.938 323 180 9 1 316 285 600 1.82e-62 213
MS.gene74134.t1 AT4G37910 41.176 323 176 9 1 316 280 595 3.18e-59 204
MS.gene74134.t1 AT4G37910 41.176 323 176 9 1 316 280 595 3.18e-59 204
MS.gene74134.t1 AT2G32120 34.298 242 151 6 27 263 286 524 1.51e-31 125
MS.gene74134.t1 AT2G32120 34.298 242 151 6 27 263 286 524 1.51e-31 125
MS.gene74134.t1 AT1G11660 26.267 434 255 15 1 380 202 624 2.71e-27 114
MS.gene74134.t1 AT1G11660 26.267 434 255 15 1 380 239 661 2.77e-27 114
MS.gene74134.t1 AT1G11660 26.267 434 255 15 1 380 239 661 2.77e-27 114
MS.gene74134.t1 AT1G11660 26.267 434 255 15 1 380 239 661 2.77e-27 114
MS.gene74134.t1 AT4G16660 28.571 280 165 6 1 254 273 543 5.78e-26 110
MS.gene74134.t1 AT4G16660 31.707 205 131 2 1 196 297 501 6.61e-26 110
MS.gene74134.t1 AT1G79920 29.412 204 130 3 1 192 238 439 4.67e-20 92.8
MS.gene74134.t1 AT1G79920 29.412 204 130 3 1 192 238 439 4.67e-20 92.8
MS.gene74134.t1 AT1G79920 29.412 204 130 3 1 192 238 439 4.67e-20 92.8
MS.gene74134.t1 AT1G79920 29.412 204 130 3 1 192 238 439 4.76e-20 92.4
MS.gene74134.t1 AT1G79930 28.922 204 131 3 1 192 238 439 1.20e-19 91.3
MS.gene74134.t1 AT1G79930 28.922 204 131 3 1 192 238 439 1.30e-19 91.3

Find 72 sgRNAs with CRISPR-Local

Find 81 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCAACCTCCTCAGGGCTTT+TGG 0.162983 7.4:-75498208 None:intergenic
TGCATATTTAGTTGAAATTA+TGG 0.178409 7.4:+75498744 MS.gene74134:CDS
TATGCATTACCTTCATCTTT+AGG 0.182314 7.4:-75498727 None:intergenic
ATGCATTACCTTCATCTTTA+GGG 0.246907 7.4:-75498726 None:intergenic
TCCTTGTTGGTGGTTCTTCT+AGG 0.249840 7.4:+75498443 MS.gene74134:CDS
CCTTGAAATTGTCAGCTTCC+TGG 0.269169 7.4:-75498990 None:intergenic
ATTACAATAACTAATGAAAA+TGG 0.292577 7.4:+75498934 MS.gene74134:CDS
AGAACTTTCTTACATCAATA+AGG 0.318018 7.4:+75498255 MS.gene74134:CDS
GATTAATTCTGCAATGATAA+AGG 0.326851 7.4:+75499140 MS.gene74134:CDS
TGTAATAGCTGTCTCACTTT+AGG 0.338590 7.4:-75498469 None:intergenic
TAAGTTTGAGCAACTGAATA+TGG 0.354840 7.4:+75498339 MS.gene74134:CDS
ACATCCTGCAGTACAAAGTT+TGG 0.363650 7.4:-75498601 None:intergenic
AGTTGAAGCAAGAAATGCTT+TGG 0.381737 7.4:+75499038 MS.gene74134:CDS
TGCTTATGGTGCAGCTGTCC+AGG 0.386356 7.4:+75498546 MS.gene74134:CDS
CCTGACGAGGCTGTTGCTTA+TGG 0.386964 7.4:+75498532 MS.gene74134:CDS
CCATAAGCAACAGCCTCGTC+AGG 0.403631 7.4:-75498532 None:intergenic
TAAACTTGTGTCTTCTTGAA+TGG 0.405865 7.4:-75498697 None:intergenic
AGTTGAAATTATGGTTTATG+AGG 0.406537 7.4:+75498753 MS.gene74134:CDS
TAAAGTGAGACAGCTATTAC+AGG 0.414531 7.4:+75498471 MS.gene74134:CDS
GATGTTACCCCTTTGTCACT+TGG 0.431351 7.4:+75498619 MS.gene74134:CDS
AGAGATTGAGAGAATGATCC+AGG 0.439899 7.4:+75498972 MS.gene74134:CDS
TGACATAGATGCTATGTGTC+AGG 0.442076 7.4:+75498285 MS.gene74134:CDS
ATTAATTCTGCAATGATAAA+GGG 0.444399 7.4:+75499141 MS.gene74134:CDS
GTAGATGATGTAGTCCTTGT+TGG 0.452511 7.4:+75498430 MS.gene74134:CDS
ATGAAAATGGAAGATTATCA+AGG 0.459072 7.4:+75498947 MS.gene74134:CDS
TCACTTGGTATCTATACAAA+AGG 0.464893 7.4:+75498634 MS.gene74134:CDS
AAGGGAGAAAGTATGATTGA+TGG 0.472563 7.4:+75499159 MS.gene74134:CDS
TGTTCCAAACTTTGTACTGC+AGG 0.476659 7.4:+75498597 MS.gene74134:CDS
TTATGAGTGTGGTGATTCCT+AGG 0.478815 7.4:+75498662 MS.gene74134:CDS
TATTATACCCCTAAAGATGA+AGG 0.481135 7.4:+75498718 MS.gene74134:CDS
CCAGGAAGCTGACAATTTCA+AGG 0.491682 7.4:+75498990 MS.gene74134:CDS
GGATCTCTTTGAAAAGTGTA+TGG 0.494325 7.4:+75498360 MS.gene74134:CDS
TGAATAAGATCGACAAAGGT+TGG 0.494660 7.4:+75499253 MS.gene74134:CDS
TGCTTTGCTATAGATGCTAA+TGG 0.495524 7.4:+75498862 MS.gene74134:CDS
AGTAATCAAGTTGACATTAG+TGG 0.495682 7.4:+75498181 MS.gene74134:CDS
GTTGAAATTATGGTTTATGA+GGG 0.502673 7.4:+75498754 MS.gene74134:CDS
TATAGATACCAAGTGACAAA+GGG 0.503607 7.4:-75498627 None:intergenic
TCTTGCATAATTCCTTCCCT+TGG 0.504090 7.4:-75498501 None:intergenic
TTGTCTTGCAGATGCTAAGA+TGG 0.509643 7.4:+75498396 MS.gene74134:CDS
AATGGTACAGAAGTATTCCT+AGG 0.513462 7.4:-75498679 None:intergenic
GTTGCAAAATTCTTGCGAAA+GGG 0.537742 7.4:+75498225 MS.gene74134:CDS
AGAGGAAGGTCGGGAGCAAG+AGG 0.538852 7.4:-75498832 None:intergenic
GGTTGCAAAATTCTTGCGAA+AGG 0.542040 7.4:+75498224 MS.gene74134:CDS
TATGATTGATGGCAACCAGC+AGG 0.544417 7.4:+75499170 MS.gene74134:CDS
ATTTCGTGAAAGAGTTTGAG+AGG 0.548392 7.4:+75498158 MS.gene74134:CDS
GCATACTGTGAGAGGAAGGT+CGG 0.550540 7.4:-75498842 None:intergenic
CATACTGTGAGAGGAAGGTC+GGG 0.559300 7.4:-75498841 None:intergenic
TGCATTACCTTCATCTTTAG+GGG 0.565788 7.4:-75498725 None:intergenic
GATGATGTAGTCCTTGTTGG+TGG 0.568404 7.4:+75498433 MS.gene74134:CDS
GCAAGTGAGAACAACTTGCT+TGG 0.568418 7.4:+75498790 MS.gene74134:CDS
CAGGCTGCTTTGTTGAGTGA+AGG 0.571905 7.4:+75498565 MS.gene74134:CDS
GACATAGATGCTATGTGTCA+GGG 0.576550 7.4:+75498286 MS.gene74134:CDS
AAACAGACGTATCTTCCTGC+TGG 0.578169 7.4:-75499185 None:intergenic
TAATCTTCTCTTTGTCTACA+CGG 0.578212 7.4:-75499122 None:intergenic
AAAAGGAGATATTATGAGTG+TGG 0.581319 7.4:+75498651 MS.gene74134:CDS
CAAAGCATACTGTGAGAGGA+AGG 0.584073 7.4:-75498846 None:intergenic
GTATAGATACCAAGTGACAA+AGG 0.585134 7.4:-75498628 None:intergenic
TGAAAATGGAAGATTATCAA+GGG 0.589866 7.4:+75498948 MS.gene74134:CDS
CATAGCATCTATGTCAATTG+TGG 0.590022 7.4:-75498278 None:intergenic
TCTATTAAACGTCTCTGCAG+TGG 0.590731 7.4:+75498885 MS.gene74134:CDS
CTTCTGTTCATCAATTACAC+GGG 0.593976 7.4:+75498315 MS.gene74134:CDS
ACTTCTGTTCATCAATTACA+CGG 0.601595 7.4:+75498314 MS.gene74134:CDS
ATAGCAAAGCATACTGTGAG+AGG 0.602824 7.4:-75498850 None:intergenic
CTTCACTCAACAAAGCAGCC+TGG 0.604632 7.4:-75498564 None:intergenic
GCGTCCCAAAAGCCCTGAGG+AGG 0.616816 7.4:+75498203 MS.gene74134:CDS
CAAGAGCATCAACCCTGACG+AGG 0.635142 7.4:+75498519 MS.gene74134:CDS
GCTATGAATAAGATCGACAA+AGG 0.637168 7.4:+75499249 MS.gene74134:CDS
CATAAGCAACAGCCTCGTCA+GGG 0.646019 7.4:-75498531 None:intergenic
TCCTAGAAGAACCACCAACA+AGG 0.656071 7.4:-75498444 None:intergenic
TCTGCAGTGGACGAAACCAG+TGG 0.685856 7.4:+75498898 MS.gene74134:CDS
ATAGATACCAAGTGACAAAG+GGG 0.717788 7.4:-75498626 None:intergenic
GTGGCGTCCCAAAAGCCCTG+AGG 0.741708 7.4:+75498200 MS.gene74134:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTACAATAACTAATGAAAA+TGG + chr7.4:75498934-75498953 MS.gene74134:CDS 15.0%
!! ATTAATTCTGCAATGATAAA+GGG + chr7.4:75499141-75499160 MS.gene74134:CDS 20.0%
!! TGCATATTTAGTTGAAATTA+TGG + chr7.4:75498744-75498763 MS.gene74134:CDS 20.0%
!!! TGTTTTTGTAAACTTTTTGA+AGG + chr7.4:75499203-75499222 MS.gene74134:CDS 20.0%
! AGAACTTTCTTACATCAATA+AGG + chr7.4:75498255-75498274 MS.gene74134:CDS 25.0%
! AGTTGAAATTATGGTTTATG+AGG + chr7.4:75498753-75498772 MS.gene74134:CDS 25.0%
! ATGAAAATGGAAGATTATCA+AGG + chr7.4:75498947-75498966 MS.gene74134:CDS 25.0%
! GATTAATTCTGCAATGATAA+AGG + chr7.4:75499140-75499159 MS.gene74134:CDS 25.0%
! GTTGAAATTATGGTTTATGA+GGG + chr7.4:75498754-75498773 MS.gene74134:CDS 25.0%
! TGAAAATGGAAGATTATCAA+GGG + chr7.4:75498948-75498967 MS.gene74134:CDS 25.0%
!!! AATTTCATTTTTATTGCCAC+TGG - chr7.4:75498917-75498936 None:intergenic 25.0%
AAAAGGAGATATTATGAGTG+TGG + chr7.4:75498651-75498670 MS.gene74134:CDS 30.0%
ACTTCTGTTCATCAATTACA+CGG + chr7.4:75498314-75498333 MS.gene74134:CDS 30.0%
ATGCATTACCTTCATCTTTA+GGG - chr7.4:75498729-75498748 None:intergenic 30.0%
TAAACTTGTGTCTTCTTGAA+TGG - chr7.4:75498700-75498719 None:intergenic 30.0%
TAAGTTTGAGCAACTGAATA+TGG + chr7.4:75498339-75498358 MS.gene74134:CDS 30.0%
TAATCTTCTCTTTGTCTACA+CGG - chr7.4:75499125-75499144 None:intergenic 30.0%
TATAGATACCAAGTGACAAA+GGG - chr7.4:75498630-75498649 None:intergenic 30.0%
TATGCATTACCTTCATCTTT+AGG - chr7.4:75498730-75498749 None:intergenic 30.0%
TATTATACCCCTAAAGATGA+AGG + chr7.4:75498718-75498737 MS.gene74134:CDS 30.0%
TCACTTGGTATCTATACAAA+AGG + chr7.4:75498634-75498653 MS.gene74134:CDS 30.0%
! TATTACAGGAGTTTTTCCAA+GGG + chr7.4:75498485-75498504 MS.gene74134:CDS 30.0%
!! AGTAATCAAGTTGACATTAG+TGG + chr7.4:75498181-75498200 MS.gene74134:CDS 30.0%
AGTTGAAGCAAGAAATGCTT+TGG + chr7.4:75499038-75499057 MS.gene74134:CDS 35.0%
ATAGATACCAAGTGACAAAG+GGG - chr7.4:75498629-75498648 None:intergenic 35.0%
ATTTCGTGAAAGAGTTTGAG+AGG + chr7.4:75498158-75498177 MS.gene74134:CDS 35.0%
CATAGCATCTATGTCAATTG+TGG - chr7.4:75498281-75498300 None:intergenic 35.0%
CTTCTGTTCATCAATTACAC+GGG + chr7.4:75498315-75498334 MS.gene74134:CDS 35.0%
GCTATGAATAAGATCGACAA+AGG + chr7.4:75499249-75499268 MS.gene74134:CDS 35.0%
GTATAGATACCAAGTGACAA+AGG - chr7.4:75498631-75498650 None:intergenic 35.0%
GTTGCAAAATTCTTGCGAAA+GGG + chr7.4:75498225-75498244 MS.gene74134:CDS 35.0%
TAAAGTGAGACAGCTATTAC+AGG + chr7.4:75498471-75498490 MS.gene74134:CDS 35.0%
TGAATAAGATCGACAAAGGT+TGG + chr7.4:75499253-75499272 MS.gene74134:CDS 35.0%
TGCATTACCTTCATCTTTAG+GGG - chr7.4:75498728-75498747 None:intergenic 35.0%
TGTAATAGCTGTCTCACTTT+AGG - chr7.4:75498472-75498491 None:intergenic 35.0%
! AAGGGAGAAAGTATGATTGA+TGG + chr7.4:75499159-75499178 MS.gene74134:CDS 35.0%
! CTATTACAGGAGTTTTTCCA+AGG + chr7.4:75498484-75498503 MS.gene74134:CDS 35.0%
! GGATCTCTTTGAAAAGTGTA+TGG + chr7.4:75498360-75498379 MS.gene74134:CDS 35.0%
! TGCTTTGCTATAGATGCTAA+TGG + chr7.4:75498862-75498881 MS.gene74134:CDS 35.0%
!! AATGGTACAGAAGTATTCCT+AGG - chr7.4:75498682-75498701 None:intergenic 35.0%
!! CTTTTTGAAGGAGCTTAAGA+TGG + chr7.4:75499215-75499234 MS.gene74134:CDS 35.0%
ACATCCTGCAGTACAAAGTT+TGG - chr7.4:75498604-75498623 None:intergenic 40.0%
AGAGATTGAGAGAATGATCC+AGG + chr7.4:75498972-75498991 MS.gene74134:CDS 40.0%
ATAGCAAAGCATACTGTGAG+AGG - chr7.4:75498853-75498872 None:intergenic 40.0%
GACATAGATGCTATGTGTCA+GGG + chr7.4:75498286-75498305 MS.gene74134:CDS 40.0%
GGTTGCAAAATTCTTGCGAA+AGG + chr7.4:75498224-75498243 MS.gene74134:CDS 40.0%
GTAGATGATGTAGTCCTTGT+TGG + chr7.4:75498430-75498449 MS.gene74134:CDS 40.0%
TCTATTAAACGTCTCTGCAG+TGG + chr7.4:75498885-75498904 MS.gene74134:CDS 40.0%
TCTTGCATAATTCCTTCCCT+TGG - chr7.4:75498504-75498523 None:intergenic 40.0%
TGACATAGATGCTATGTGTC+AGG + chr7.4:75498285-75498304 MS.gene74134:CDS 40.0%
TGTTCCAAACTTTGTACTGC+AGG + chr7.4:75498597-75498616 MS.gene74134:CDS 40.0%
TTATGAGTGTGGTGATTCCT+AGG + chr7.4:75498662-75498681 MS.gene74134:CDS 40.0%
TTGTCTTGCAGATGCTAAGA+TGG + chr7.4:75498396-75498415 MS.gene74134:CDS 40.0%
! AAGAATTTTGCAACCTCCTC+AGG - chr7.4:75498219-75498238 None:intergenic 40.0%
! AGAATTTTGCAACCTCCTCA+GGG - chr7.4:75498218-75498237 None:intergenic 40.0%
AAACAGACGTATCTTCCTGC+TGG - chr7.4:75499188-75499207 None:intergenic 45.0%
CAAAGCATACTGTGAGAGGA+AGG - chr7.4:75498849-75498868 None:intergenic 45.0%
CCAGGAAGCTGACAATTTCA+AGG + chr7.4:75498990-75499009 MS.gene74134:CDS 45.0%
CCTTGAAATTGTCAGCTTCC+TGG - chr7.4:75498993-75499012 None:intergenic 45.0%
GATGATGTAGTCCTTGTTGG+TGG + chr7.4:75498433-75498452 MS.gene74134:CDS 45.0%
GATGTTACCCCTTTGTCACT+TGG + chr7.4:75498619-75498638 MS.gene74134:CDS 45.0%
TCCTAGAAGAACCACCAACA+AGG - chr7.4:75498447-75498466 None:intergenic 45.0%
! ACAGGAGTTTTTCCAAGGGA+AGG + chr7.4:75498489-75498508 MS.gene74134:CDS 45.0%
! GCAAGTGAGAACAACTTGCT+TGG + chr7.4:75498790-75498809 MS.gene74134:CDS 45.0%
! TATGATTGATGGCAACCAGC+AGG + chr7.4:75499170-75499189 MS.gene74134:CDS 45.0%
!! TCCTTGTTGGTGGTTCTTCT+AGG + chr7.4:75498443-75498462 MS.gene74134:CDS 45.0%
CATAAGCAACAGCCTCGTCA+GGG - chr7.4:75498534-75498553 None:intergenic 50.0%
CATACTGTGAGAGGAAGGTC+GGG - chr7.4:75498844-75498863 None:intergenic 50.0%
CTTCACTCAACAAAGCAGCC+TGG - chr7.4:75498567-75498586 None:intergenic 50.0%
GCATACTGTGAGAGGAAGGT+CGG - chr7.4:75498845-75498864 None:intergenic 50.0%
! CAGGCTGCTTTGTTGAGTGA+AGG + chr7.4:75498565-75498584 MS.gene74134:CDS 50.0%
CCATAAGCAACAGCCTCGTC+AGG - chr7.4:75498535-75498554 None:intergenic 55.0%
TCTGCAGTGGACGAAACCAG+TGG + chr7.4:75498898-75498917 MS.gene74134:CDS 55.0%
TGCTTATGGTGCAGCTGTCC+AGG + chr7.4:75498546-75498565 MS.gene74134:CDS 55.0%
! CCTGACGAGGCTGTTGCTTA+TGG + chr7.4:75498532-75498551 MS.gene74134:CDS 55.0%
! GCAACCTCCTCAGGGCTTTT+GGG - chr7.4:75498210-75498229 None:intergenic 55.0%
! TGCAACCTCCTCAGGGCTTT+TGG - chr7.4:75498211-75498230 None:intergenic 55.0%
!! CAAGAGCATCAACCCTGACG+AGG + chr7.4:75498519-75498538 MS.gene74134:CDS 55.0%
AGAGGAAGGTCGGGAGCAAG+AGG - chr7.4:75498835-75498854 None:intergenic 60.0%
GCGTCCCAAAAGCCCTGAGG+AGG + chr7.4:75498203-75498222 MS.gene74134:CDS 65.0%
GTGGCGTCCCAAAAGCCCTG+AGG + chr7.4:75498200-75498219 MS.gene74134:CDS 65.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 75498148 75499305 75498148 ID=MS.gene74134
chr7.4 mRNA 75498148 75499305 75498148 ID=MS.gene74134.t1;Parent=MS.gene74134
chr7.4 exon 75498148 75499305 75498148 ID=MS.gene74134.t1.exon1;Parent=MS.gene74134.t1
chr7.4 CDS 75498148 75499305 75498148 ID=cds.MS.gene74134.t1;Parent=MS.gene74134.t1
Gene Sequence

>MS.gene74134

ATGGTGAAACATTTCGTGAAAGAGTTTGAGAGGAGTAATCAAGTTGACATTAGTGGCGTCCCAAAAGCCCTGAGGAGGTTGCAAAATTCTTGCGAAAGGGCAAAAAGAGAACTTTCTTACATCAATAAGGCCACAATTGACATAGATGCTATGTGTCAGGGCATTGACTTCTGTTCATCAATTACACGGGCTAAGTTTGAGCAACTGAATATGGATCTCTTTGAAAAGTGTATGGAGATTGTTAAGAGTTGTCTTGCAGATGCTAAGATGGACAAGAGTTGTGTAGATGATGTAGTCCTTGTTGGTGGTTCTTCTAGGATTCCTAAAGTGAGACAGCTATTACAGGAGTTTTTCCAAGGGAAGGAATTATGCAAGAGCATCAACCCTGACGAGGCTGTTGCTTATGGTGCAGCTGTCCAGGCTGCTTTGTTGAGTGAAGGCAGTAAGAATGTTCCAAACTTTGTACTGCAGGATGTTACCCCTTTGTCACTTGGTATCTATACAAAAGGAGATATTATGAGTGTGGTGATTCCTAGGAATACTTCTGTACCATTCAAGAAGACACAAGTTTATTATACCCCTAAAGATGAAGGTAATGCATATTTAGTTGAAATTATGGTTTATGAGGGTGAGAGAATTGTTGCAAGTGAGAACAACTTGCTTGGTTTGTTTGATCTCAAAGTTCCTCTTGCTCCCGACCTTCCTCTCACAGTATGCTTTGCTATAGATGCTAATGGTCTATTAAACGTCTCTGCAGTGGACGAAACCAGTGGCAATAAAAATGAAATTACAATAACTAATGAAAATGGAAGATTATCAAGGGAAGAGATTGAGAGAATGATCCAGGAAGCTGACAATTTCAAGGCTGAAGACATGAAGTTCAAAATGAAAGTTGAAGCAAGAAATGCTTTGGAAGATTATCTTTACGAAATGAGAAAAAAAATGAATAATGATAGTGTTAGTTCAAAGCTCGACCGTGTAGACAAAGAGAAGATTAATTCTGCAATGATAAAGGGAGAAAGTATGATTGATGGCAACCAGCAGGAAGATACGTCTGTTTTTGTAAACTTTTTGAAGGAGCTTAAGATGGTCTTTGAAGCTGCTATGAATAAGATCGACAAAGGTTGGTCAGATGTTGAAATGATTATGATTGATTAA

Protein sequence

>MS.gene74134.t1

MVKHFVKEFERSNQVDISGVPKALRRLQNSCERAKRELSYINKATIDIDAMCQGIDFCSSITRAKFEQLNMDLFEKCMEIVKSCLADAKMDKSCVDDVVLVGGSSRIPKVRQLLQEFFQGKELCKSINPDEAVAYGAAVQAALLSEGSKNVPNFVLQDVTPLSLGIYTKGDIMSVVIPRNTSVPFKKTQVYYTPKDEGNAYLVEIMVYEGERIVASENNLLGLFDLKVPLAPDLPLTVCFAIDANGLLNVSAVDETSGNKNEITITNENGRLSREEIERMIQEADNFKAEDMKFKMKVEARNALEDYLYEMRKKMNNDSVSSKLDRVDKEKINSAMIKGESMIDGNQQEDTSVFVNFLKELKMVFEAAMNKIDKGWSDVEMIMID