Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74134.t1 | AES78181.2 | 77.4 | 376 | 82 | 2 | 1 | 375 | 231 | 604 | 4.20E-152 | 547.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74134.t1 | P09189 | 58.6 | 379 | 151 | 5 | 1 | 375 | 243 | 619 | 1.7e-114 | 414.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74134.t1 | G7KYY8 | 77.4 | 376 | 82 | 2 | 1 | 375 | 231 | 604 | 3.0e-152 | 547.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049142 | MS.gene74134 | 0.821641 | 3.63E-53 | -1.69E-46 |
MS.gene04976 | MS.gene74134 | 0.802429 | 5.63E-49 | -1.69E-46 |
MS.gene05016 | MS.gene74134 | 0.808265 | 3.37E-50 | -1.69E-46 |
MS.gene050807 | MS.gene74134 | 0.800832 | 1.20E-48 | -1.69E-46 |
MS.gene051719 | MS.gene74134 | 0.802421 | 5.65E-49 | -1.69E-46 |
MS.gene051720 | MS.gene74134 | 0.812701 | 3.71E-51 | -1.69E-46 |
MS.gene052020 | MS.gene74134 | 0.802501 | 5.44E-49 | -1.69E-46 |
MS.gene052323 | MS.gene74134 | 0.82801 | 1.14E-54 | -1.69E-46 |
MS.gene052516 | MS.gene74134 | 0.825053 | 5.78E-54 | -1.69E-46 |
MS.gene052611 | MS.gene74134 | 0.822967 | 1.78E-53 | -1.69E-46 |
MS.gene052665 | MS.gene74134 | 0.818501 | 1.90E-52 | -1.69E-46 |
MS.gene052773 | MS.gene74134 | 0.817466 | 3.25E-52 | -1.69E-46 |
MS.gene052863 | MS.gene74134 | 0.822109 | 2.82E-53 | -1.69E-46 |
MS.gene052896 | MS.gene74134 | 0.800459 | 1.43E-48 | -1.69E-46 |
MS.gene053221 | MS.gene74134 | 0.801557 | 8.51E-49 | -1.69E-46 |
MS.gene053599 | MS.gene74134 | 0.810453 | 1.14E-50 | -1.69E-46 |
MS.gene054467 | MS.gene74134 | 0.808556 | 2.92E-50 | -1.69E-46 |
MS.gene054472 | MS.gene74134 | 0.82028 | 7.45E-53 | -1.69E-46 |
MS.gene055465 | MS.gene74134 | 0.811335 | 7.37E-51 | -1.69E-46 |
MS.gene055466 | MS.gene74134 | 0.803671 | 3.12E-49 | -1.69E-46 |
MS.gene055469 | MS.gene74134 | 0.807072 | 6.04E-50 | -1.69E-46 |
MS.gene055818 | MS.gene74134 | 0.818145 | 2.28E-52 | -1.69E-46 |
MS.gene05604 | MS.gene74134 | 0.825555 | 4.40E-54 | -1.69E-46 |
MS.gene056173 | MS.gene74134 | 0.804827 | 1.79E-49 | -1.69E-46 |
MS.gene057869 | MS.gene74134 | 0.805368 | 1.38E-49 | -1.69E-46 |
MS.gene057915 | MS.gene74134 | 0.808195 | 3.49E-50 | -1.69E-46 |
MS.gene058625 | MS.gene74134 | 0.816771 | 4.66E-52 | -1.69E-46 |
MS.gene058636 | MS.gene74134 | 0.821214 | 4.55E-53 | -1.69E-46 |
MS.gene059439 | MS.gene74134 | 0.803698 | 3.08E-49 | -1.69E-46 |
MS.gene059725 | MS.gene74134 | 0.822035 | 2.94E-53 | -1.69E-46 |
MS.gene060312 | MS.gene74134 | 0.8017 | 7.96E-49 | -1.69E-46 |
MS.gene06052 | MS.gene74134 | 0.804385 | 2.22E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74134.t1 | MTR_7g025630 | 77.394 | 376 | 82 | 2 | 1 | 375 | 231 | 604 | 0.0 | 576 |
MS.gene74134.t1 | MTR_8g032650 | 72.178 | 381 | 103 | 2 | 1 | 380 | 245 | 623 | 0.0 | 544 |
MS.gene74134.t1 | MTR_7g026030 | 70.866 | 381 | 108 | 2 | 1 | 380 | 245 | 623 | 0.0 | 543 |
MS.gene74134.t1 | MTR_7g025720 | 72.340 | 376 | 101 | 2 | 1 | 375 | 245 | 618 | 0.0 | 542 |
MS.gene74134.t1 | MTR_7g025760 | 69.761 | 377 | 110 | 2 | 1 | 375 | 245 | 619 | 0.0 | 531 |
MS.gene74134.t1 | MTR_7g078210 | 67.460 | 378 | 119 | 3 | 1 | 375 | 245 | 621 | 2.86e-178 | 510 |
MS.gene74134.t1 | MTR_7g078190 | 68.074 | 379 | 117 | 3 | 1 | 376 | 246 | 623 | 8.67e-178 | 509 |
MS.gene74134.t1 | MTR_7g025790 | 68.901 | 373 | 113 | 2 | 1 | 372 | 245 | 615 | 8.75e-177 | 506 |
MS.gene74134.t1 | MTR_7g025260 | 65.183 | 382 | 129 | 2 | 1 | 380 | 217 | 596 | 2.74e-175 | 501 |
MS.gene74134.t1 | MTR_7g025740 | 65.316 | 395 | 127 | 4 | 1 | 385 | 245 | 639 | 3.45e-173 | 498 |
MS.gene74134.t1 | MTR_7g025620 | 66.216 | 370 | 122 | 2 | 1 | 369 | 245 | 612 | 3.93e-168 | 484 |
MS.gene74134.t1 | MTR_7g024030 | 66.216 | 370 | 122 | 2 | 1 | 369 | 245 | 612 | 1.38e-164 | 475 |
MS.gene74134.t1 | MTR_7g025820 | 64.773 | 352 | 120 | 2 | 1 | 350 | 245 | 594 | 6.05e-158 | 457 |
MS.gene74134.t1 | MTR_4g063720 | 60.326 | 368 | 140 | 5 | 1 | 364 | 243 | 608 | 9.77e-149 | 436 |
MS.gene74134.t1 | MTR_4g063710 | 60.326 | 368 | 140 | 5 | 1 | 364 | 243 | 608 | 3.44e-148 | 434 |
MS.gene74134.t1 | MTR_7g099680 | 57.662 | 385 | 157 | 5 | 1 | 381 | 243 | 625 | 1.63e-146 | 430 |
MS.gene74134.t1 | MTR_7g024580 | 57.743 | 381 | 155 | 5 | 1 | 377 | 243 | 621 | 1.76e-146 | 430 |
MS.gene74134.t1 | MTR_7g024390 | 59.563 | 366 | 142 | 5 | 1 | 362 | 243 | 606 | 1.92e-145 | 427 |
MS.gene74134.t1 | MTR_8g103930 | 57.487 | 374 | 155 | 3 | 1 | 372 | 242 | 613 | 5.26e-141 | 414 |
MS.gene74134.t1 | MTR_7g021440 | 57.724 | 369 | 152 | 3 | 1 | 367 | 245 | 611 | 6.62e-141 | 414 |
MS.gene74134.t1 | MTR_7g026110 | 55.108 | 372 | 164 | 2 | 1 | 371 | 244 | 613 | 2.17e-140 | 413 |
MS.gene74134.t1 | MTR_4g130540 | 55.906 | 381 | 162 | 5 | 1 | 377 | 242 | 620 | 1.60e-139 | 412 |
MS.gene74134.t1 | MTR_2g022050 | 57.867 | 375 | 152 | 4 | 1 | 371 | 245 | 617 | 3.60e-139 | 410 |
MS.gene74134.t1 | MTR_2g032550 | 57.029 | 377 | 156 | 5 | 1 | 373 | 246 | 620 | 2.37e-138 | 408 |
MS.gene74134.t1 | MTR_5g066800 | 56.568 | 373 | 158 | 3 | 1 | 371 | 256 | 626 | 2.91e-138 | 408 |
MS.gene74134.t1 | MTR_7g011590 | 58.543 | 357 | 145 | 2 | 1 | 356 | 233 | 587 | 1.08e-136 | 403 |
MS.gene74134.t1 | MTR_2g038270 | 56.757 | 370 | 154 | 5 | 1 | 366 | 253 | 620 | 2.78e-134 | 398 |
MS.gene74134.t1 | MTR_7g451380 | 55.200 | 375 | 162 | 4 | 1 | 371 | 245 | 617 | 8.59e-134 | 396 |
MS.gene74134.t1 | MTR_7g025770 | 55.827 | 369 | 158 | 4 | 1 | 366 | 245 | 611 | 1.04e-133 | 396 |
MS.gene74134.t1 | MTR_2g038260 | 56.150 | 374 | 157 | 6 | 2 | 371 | 246 | 616 | 1.36e-132 | 393 |
MS.gene74134.t1 | MTR_7g026090 | 56.873 | 371 | 154 | 4 | 1 | 369 | 245 | 611 | 1.13e-131 | 390 |
MS.gene74134.t1 | MTR_7g026140 | 54.324 | 370 | 162 | 5 | 1 | 366 | 229 | 595 | 2.50e-127 | 380 |
MS.gene74134.t1 | MTR_1g041565 | 53.930 | 369 | 148 | 4 | 1 | 366 | 188 | 537 | 3.01e-127 | 377 |
MS.gene74134.t1 | MTR_4g079590 | 55.068 | 365 | 159 | 4 | 1 | 362 | 245 | 607 | 5.54e-127 | 379 |
MS.gene74134.t1 | MTR_7g029415 | 54.255 | 376 | 166 | 4 | 1 | 373 | 252 | 624 | 2.37e-126 | 377 |
MS.gene74134.t1 | MTR_7g026050 | 52.973 | 370 | 141 | 5 | 1 | 366 | 1 | 341 | 2.20e-125 | 365 |
MS.gene74134.t1 | MTR_4g027145 | 55.840 | 351 | 151 | 3 | 1 | 349 | 257 | 605 | 2.50e-124 | 372 |
MS.gene74134.t1 | MTR_2g437440 | 54.521 | 376 | 145 | 6 | 1 | 371 | 245 | 599 | 6.85e-124 | 370 |
MS.gene74134.t1 | MTR_7g026170 | 53.476 | 374 | 169 | 4 | 1 | 371 | 245 | 616 | 7.89e-124 | 371 |
MS.gene74134.t1 | MTR_4g063720 | 59.688 | 320 | 123 | 5 | 49 | 364 | 220 | 537 | 9.58e-124 | 369 |
MS.gene74134.t1 | MTR_7g074460 | 56.213 | 338 | 144 | 2 | 38 | 373 | 264 | 599 | 2.44e-123 | 369 |
MS.gene74134.t1 | MTR_7g026130 | 54.891 | 368 | 156 | 4 | 1 | 361 | 245 | 609 | 9.76e-118 | 358 |
MS.gene74134.t1 | MTR_1g017130 | 51.902 | 368 | 134 | 4 | 1 | 366 | 245 | 571 | 1.46e-115 | 348 |
MS.gene74134.t1 | MTR_2g032580 | 51.596 | 376 | 143 | 7 | 1 | 371 | 245 | 586 | 2.08e-114 | 345 |
MS.gene74134.t1 | MTR_7g451360 | 48.421 | 380 | 158 | 5 | 1 | 376 | 215 | 560 | 9.54e-112 | 338 |
MS.gene74134.t1 | MTR_6g033800 | 49.062 | 373 | 185 | 4 | 1 | 371 | 154 | 523 | 2.79e-111 | 337 |
MS.gene74134.t1 | MTR_6g033850 | 49.198 | 374 | 185 | 4 | 1 | 371 | 243 | 614 | 4.32e-111 | 340 |
MS.gene74134.t1 | MTR_6g033870 | 48.731 | 394 | 190 | 5 | 1 | 384 | 245 | 636 | 2.37e-109 | 335 |
MS.gene74134.t1 | MTR_6g033760 | 49.864 | 367 | 176 | 5 | 1 | 361 | 243 | 607 | 2.01e-108 | 331 |
MS.gene74134.t1 | MTR_6g033820 | 45.939 | 394 | 201 | 5 | 1 | 384 | 243 | 634 | 2.29e-104 | 322 |
MS.gene74134.t1 | MTR_7g007000 | 48.378 | 370 | 160 | 6 | 1 | 366 | 227 | 569 | 3.70e-104 | 319 |
MS.gene74134.t1 | MTR_6g033955 | 50.437 | 343 | 160 | 5 | 1 | 335 | 243 | 583 | 3.34e-102 | 316 |
MS.gene74134.t1 | MTR_8g099795 | 47.443 | 352 | 178 | 6 | 1 | 347 | 269 | 618 | 9.31e-102 | 315 |
MS.gene74134.t1 | MTR_8g099945 | 47.159 | 352 | 179 | 6 | 1 | 347 | 269 | 618 | 4.69e-101 | 313 |
MS.gene74134.t1 | MTR_2g017730 | 48.538 | 342 | 158 | 8 | 1 | 332 | 242 | 575 | 1.81e-95 | 297 |
MS.gene74134.t1 | MTR_1g077240 | 52.189 | 297 | 130 | 5 | 78 | 371 | 1 | 288 | 3.92e-83 | 255 |
MS.gene74134.t1 | MTR_7g035155 | 42.287 | 376 | 158 | 7 | 1 | 373 | 245 | 564 | 1.75e-75 | 244 |
MS.gene74134.t1 | MTR_6g034005 | 42.857 | 350 | 174 | 8 | 1 | 336 | 163 | 500 | 2.39e-74 | 244 |
MS.gene74134.t1 | MTR_6g033810 | 60.694 | 173 | 67 | 1 | 1 | 172 | 119 | 291 | 1.78e-67 | 215 |
MS.gene74134.t1 | MTR_2g010020 | 41.176 | 323 | 176 | 9 | 1 | 316 | 282 | 597 | 1.29e-65 | 221 |
MS.gene74134.t1 | MTR_2g010020 | 41.176 | 323 | 176 | 9 | 1 | 316 | 281 | 596 | 1.31e-65 | 221 |
MS.gene74134.t1 | MTR_4g092920 | 41.176 | 323 | 176 | 9 | 1 | 316 | 145 | 460 | 1.48e-65 | 218 |
MS.gene74134.t1 | MTR_4g092920 | 41.176 | 323 | 176 | 9 | 1 | 316 | 279 | 594 | 2.12e-64 | 218 |
MS.gene74134.t1 | MTR_2g005690 | 37.640 | 356 | 206 | 10 | 1 | 349 | 298 | 644 | 4.40e-64 | 217 |
MS.gene74134.t1 | MTR_2g040160 | 66.242 | 157 | 52 | 1 | 1 | 156 | 1341 | 1497 | 4.15e-61 | 213 |
MS.gene74134.t1 | MTR_2g040220 | 60.571 | 175 | 60 | 2 | 1 | 166 | 1254 | 1428 | 2.13e-60 | 211 |
MS.gene74134.t1 | MTR_2g040260 | 65.605 | 157 | 53 | 1 | 1 | 156 | 1270 | 1426 | 4.32e-59 | 207 |
MS.gene74134.t1 | MTR_6g033855 | 47.727 | 220 | 76 | 3 | 1 | 220 | 119 | 299 | 1.79e-57 | 190 |
MS.gene74134.t1 | MTR_2g040370 | 63.816 | 152 | 55 | 0 | 1 | 152 | 1261 | 1412 | 5.07e-57 | 201 |
MS.gene74134.t1 | MTR_2g040370 | 62.914 | 151 | 56 | 0 | 1 | 151 | 1646 | 1796 | 4.63e-49 | 178 |
MS.gene74134.t1 | MTR_2g040370 | 63.816 | 152 | 55 | 0 | 1 | 152 | 1261 | 1412 | 5.21e-57 | 201 |
MS.gene74134.t1 | MTR_2g040370 | 64.138 | 145 | 52 | 0 | 1 | 145 | 1646 | 1790 | 3.28e-48 | 176 |
MS.gene74134.t1 | MTR_2g032160 | 64.885 | 131 | 46 | 0 | 1 | 131 | 245 | 375 | 6.61e-54 | 185 |
MS.gene74134.t1 | MTR_2g040350 | 60.510 | 157 | 61 | 1 | 1 | 156 | 1274 | 1430 | 2.56e-52 | 187 |
MS.gene74134.t1 | MTR_2g040350 | 60.510 | 157 | 61 | 1 | 1 | 156 | 1056 | 1212 | 2.58e-52 | 187 |
MS.gene74134.t1 | MTR_1g116250 | 41.762 | 261 | 109 | 6 | 104 | 362 | 60 | 279 | 1.76e-48 | 166 |
MS.gene74134.t1 | MTR_5g005870 | 38.246 | 285 | 160 | 9 | 47 | 323 | 61 | 337 | 5.54e-48 | 168 |
MS.gene74134.t1 | MTR_4g088515 | 76.190 | 105 | 25 | 0 | 89 | 193 | 515 | 619 | 2.98e-46 | 167 |
MS.gene74134.t1 | MTR_7g074540 | 41.089 | 202 | 115 | 2 | 173 | 372 | 1 | 200 | 7.36e-43 | 148 |
MS.gene74134.t1 | MTR_7g451390 | 40.678 | 177 | 99 | 3 | 203 | 376 | 18 | 191 | 9.63e-33 | 121 |
MS.gene74134.t1 | MTR_5g006180 | 32.432 | 259 | 145 | 9 | 1 | 250 | 270 | 507 | 4.78e-28 | 115 |
MS.gene74134.t1 | MTR_4g115780 | 35.270 | 241 | 150 | 5 | 22 | 259 | 413 | 650 | 2.58e-26 | 111 |
MS.gene74134.t1 | MTR_1g068900 | 44.030 | 134 | 74 | 1 | 183 | 315 | 23 | 156 | 3.05e-26 | 103 |
MS.gene74134.t1 | MTR_2g031670 | 87.931 | 58 | 7 | 0 | 108 | 165 | 283 | 340 | 3.24e-26 | 108 |
MS.gene74134.t1 | MTR_7g026190 | 55.319 | 94 | 33 | 2 | 44 | 137 | 9 | 93 | 8.63e-26 | 103 |
MS.gene74134.t1 | MTR_7g026190 | 47.887 | 71 | 37 | 0 | 254 | 324 | 94 | 164 | 2.23e-13 | 68.9 |
MS.gene74134.t1 | MTR_4g107920 | 36.548 | 197 | 116 | 8 | 61 | 252 | 314 | 506 | 9.39e-25 | 106 |
MS.gene74134.t1 | MTR_3g081170 | 36.424 | 151 | 94 | 1 | 1 | 149 | 274 | 424 | 3.91e-24 | 105 |
MS.gene74134.t1 | MTR_5g090110 | 33.953 | 215 | 126 | 7 | 22 | 231 | 274 | 477 | 4.52e-24 | 103 |
MS.gene74134.t1 | MTR_3g051300 | 26.005 | 423 | 242 | 15 | 1 | 362 | 238 | 650 | 4.54e-23 | 101 |
MS.gene74134.t1 | MTR_5g092570 | 23.182 | 440 | 258 | 13 | 1 | 371 | 238 | 666 | 8.33e-22 | 97.8 |
MS.gene74134.t1 | MTR_7g026180 | 33.180 | 217 | 113 | 4 | 157 | 371 | 143 | 329 | 2.92e-21 | 94.0 |
MS.gene74134.t1 | MTR_2g102180 | 28.922 | 204 | 131 | 4 | 1 | 192 | 238 | 439 | 9.09e-20 | 91.7 |
MS.gene74134.t1 | MTR_4g012050 | 28.431 | 204 | 132 | 3 | 1 | 192 | 238 | 439 | 1.22e-18 | 88.2 |
MS.gene74134.t1 | MTR_2g017710 | 37.121 | 132 | 51 | 2 | 61 | 191 | 70 | 170 | 9.52e-17 | 80.1 |
MS.gene74134.t1 | MTR_7g026095 | 38.636 | 88 | 54 | 0 | 238 | 325 | 256 | 343 | 1.11e-13 | 72.0 |
MS.gene74134.t1 | MTR_6g033815 | 56.140 | 57 | 25 | 0 | 280 | 336 | 1 | 57 | 1.57e-12 | 63.9 |
MS.gene74134.t1 | MTR_6g478100 | 37.895 | 95 | 58 | 1 | 271 | 364 | 208 | 302 | 2.49e-11 | 64.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74134.t1 | AT3G12580 | 58.575 | 379 | 151 | 5 | 1 | 375 | 243 | 619 | 3.45e-149 | 437 |
MS.gene74134.t1 | AT5G02500 | 58.696 | 368 | 146 | 5 | 1 | 364 | 243 | 608 | 3.04e-145 | 427 |
MS.gene74134.t1 | AT5G02490 | 57.609 | 368 | 150 | 5 | 1 | 364 | 243 | 608 | 1.74e-141 | 417 |
MS.gene74134.t1 | AT1G16030 | 55.906 | 381 | 162 | 5 | 1 | 377 | 242 | 620 | 8.29e-140 | 412 |
MS.gene74134.t1 | AT3G09440 | 57.609 | 368 | 150 | 5 | 1 | 364 | 243 | 608 | 2.06e-139 | 412 |
MS.gene74134.t1 | AT3G09440 | 57.609 | 368 | 150 | 5 | 1 | 364 | 243 | 608 | 2.06e-139 | 412 |
MS.gene74134.t1 | AT3G09440 | 57.609 | 368 | 150 | 5 | 1 | 364 | 243 | 608 | 2.06e-139 | 412 |
MS.gene74134.t1 | AT3G09440 | 57.609 | 368 | 150 | 5 | 1 | 364 | 243 | 608 | 2.06e-139 | 412 |
MS.gene74134.t1 | AT1G56410 | 54.881 | 379 | 163 | 6 | 1 | 375 | 243 | 617 | 1.26e-132 | 393 |
MS.gene74134.t1 | AT5G28540 | 48.509 | 369 | 183 | 6 | 1 | 364 | 268 | 634 | 8.12e-109 | 333 |
MS.gene74134.t1 | AT5G42020 | 48.238 | 369 | 184 | 6 | 1 | 364 | 268 | 634 | 1.07e-107 | 331 |
MS.gene74134.t1 | AT5G42020 | 48.238 | 369 | 184 | 6 | 1 | 364 | 273 | 639 | 2.84e-107 | 330 |
MS.gene74134.t1 | AT1G09080 | 44.920 | 374 | 199 | 5 | 4 | 372 | 275 | 646 | 3.09e-91 | 288 |
MS.gene74134.t1 | AT1G09080 | 45.902 | 366 | 191 | 5 | 4 | 364 | 285 | 648 | 3.32e-91 | 288 |
MS.gene74134.t1 | AT5G42020 | 50.000 | 234 | 113 | 3 | 1 | 232 | 268 | 499 | 8.01e-69 | 228 |
MS.gene74134.t1 | AT5G02500 | 72.414 | 145 | 40 | 0 | 1 | 145 | 243 | 387 | 1.20e-68 | 225 |
MS.gene74134.t1 | AT5G02500 | 39.785 | 93 | 56 | 0 | 272 | 364 | 386 | 478 | 1.43e-13 | 72.4 |
MS.gene74134.t1 | AT5G49910 | 36.269 | 386 | 229 | 11 | 1 | 378 | 307 | 683 | 2.23e-63 | 216 |
MS.gene74134.t1 | AT4G24280 | 39.752 | 322 | 180 | 9 | 1 | 315 | 307 | 621 | 8.30e-63 | 214 |
MS.gene74134.t1 | AT5G09590 | 39.938 | 323 | 180 | 9 | 1 | 316 | 285 | 600 | 1.82e-62 | 213 |
MS.gene74134.t1 | AT4G37910 | 41.176 | 323 | 176 | 9 | 1 | 316 | 280 | 595 | 3.18e-59 | 204 |
MS.gene74134.t1 | AT4G37910 | 41.176 | 323 | 176 | 9 | 1 | 316 | 280 | 595 | 3.18e-59 | 204 |
MS.gene74134.t1 | AT2G32120 | 34.298 | 242 | 151 | 6 | 27 | 263 | 286 | 524 | 1.51e-31 | 125 |
MS.gene74134.t1 | AT2G32120 | 34.298 | 242 | 151 | 6 | 27 | 263 | 286 | 524 | 1.51e-31 | 125 |
MS.gene74134.t1 | AT1G11660 | 26.267 | 434 | 255 | 15 | 1 | 380 | 202 | 624 | 2.71e-27 | 114 |
MS.gene74134.t1 | AT1G11660 | 26.267 | 434 | 255 | 15 | 1 | 380 | 239 | 661 | 2.77e-27 | 114 |
MS.gene74134.t1 | AT1G11660 | 26.267 | 434 | 255 | 15 | 1 | 380 | 239 | 661 | 2.77e-27 | 114 |
MS.gene74134.t1 | AT1G11660 | 26.267 | 434 | 255 | 15 | 1 | 380 | 239 | 661 | 2.77e-27 | 114 |
MS.gene74134.t1 | AT4G16660 | 28.571 | 280 | 165 | 6 | 1 | 254 | 273 | 543 | 5.78e-26 | 110 |
MS.gene74134.t1 | AT4G16660 | 31.707 | 205 | 131 | 2 | 1 | 196 | 297 | 501 | 6.61e-26 | 110 |
MS.gene74134.t1 | AT1G79920 | 29.412 | 204 | 130 | 3 | 1 | 192 | 238 | 439 | 4.67e-20 | 92.8 |
MS.gene74134.t1 | AT1G79920 | 29.412 | 204 | 130 | 3 | 1 | 192 | 238 | 439 | 4.67e-20 | 92.8 |
MS.gene74134.t1 | AT1G79920 | 29.412 | 204 | 130 | 3 | 1 | 192 | 238 | 439 | 4.67e-20 | 92.8 |
MS.gene74134.t1 | AT1G79920 | 29.412 | 204 | 130 | 3 | 1 | 192 | 238 | 439 | 4.76e-20 | 92.4 |
MS.gene74134.t1 | AT1G79930 | 28.922 | 204 | 131 | 3 | 1 | 192 | 238 | 439 | 1.20e-19 | 91.3 |
MS.gene74134.t1 | AT1G79930 | 28.922 | 204 | 131 | 3 | 1 | 192 | 238 | 439 | 1.30e-19 | 91.3 |
Find 72 sgRNAs with CRISPR-Local
Find 81 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGCAACCTCCTCAGGGCTTT+TGG | 0.162983 | 7.4:-75498208 | None:intergenic |
TGCATATTTAGTTGAAATTA+TGG | 0.178409 | 7.4:+75498744 | MS.gene74134:CDS |
TATGCATTACCTTCATCTTT+AGG | 0.182314 | 7.4:-75498727 | None:intergenic |
ATGCATTACCTTCATCTTTA+GGG | 0.246907 | 7.4:-75498726 | None:intergenic |
TCCTTGTTGGTGGTTCTTCT+AGG | 0.249840 | 7.4:+75498443 | MS.gene74134:CDS |
CCTTGAAATTGTCAGCTTCC+TGG | 0.269169 | 7.4:-75498990 | None:intergenic |
ATTACAATAACTAATGAAAA+TGG | 0.292577 | 7.4:+75498934 | MS.gene74134:CDS |
AGAACTTTCTTACATCAATA+AGG | 0.318018 | 7.4:+75498255 | MS.gene74134:CDS |
GATTAATTCTGCAATGATAA+AGG | 0.326851 | 7.4:+75499140 | MS.gene74134:CDS |
TGTAATAGCTGTCTCACTTT+AGG | 0.338590 | 7.4:-75498469 | None:intergenic |
TAAGTTTGAGCAACTGAATA+TGG | 0.354840 | 7.4:+75498339 | MS.gene74134:CDS |
ACATCCTGCAGTACAAAGTT+TGG | 0.363650 | 7.4:-75498601 | None:intergenic |
AGTTGAAGCAAGAAATGCTT+TGG | 0.381737 | 7.4:+75499038 | MS.gene74134:CDS |
TGCTTATGGTGCAGCTGTCC+AGG | 0.386356 | 7.4:+75498546 | MS.gene74134:CDS |
CCTGACGAGGCTGTTGCTTA+TGG | 0.386964 | 7.4:+75498532 | MS.gene74134:CDS |
CCATAAGCAACAGCCTCGTC+AGG | 0.403631 | 7.4:-75498532 | None:intergenic |
TAAACTTGTGTCTTCTTGAA+TGG | 0.405865 | 7.4:-75498697 | None:intergenic |
AGTTGAAATTATGGTTTATG+AGG | 0.406537 | 7.4:+75498753 | MS.gene74134:CDS |
TAAAGTGAGACAGCTATTAC+AGG | 0.414531 | 7.4:+75498471 | MS.gene74134:CDS |
GATGTTACCCCTTTGTCACT+TGG | 0.431351 | 7.4:+75498619 | MS.gene74134:CDS |
AGAGATTGAGAGAATGATCC+AGG | 0.439899 | 7.4:+75498972 | MS.gene74134:CDS |
TGACATAGATGCTATGTGTC+AGG | 0.442076 | 7.4:+75498285 | MS.gene74134:CDS |
ATTAATTCTGCAATGATAAA+GGG | 0.444399 | 7.4:+75499141 | MS.gene74134:CDS |
GTAGATGATGTAGTCCTTGT+TGG | 0.452511 | 7.4:+75498430 | MS.gene74134:CDS |
ATGAAAATGGAAGATTATCA+AGG | 0.459072 | 7.4:+75498947 | MS.gene74134:CDS |
TCACTTGGTATCTATACAAA+AGG | 0.464893 | 7.4:+75498634 | MS.gene74134:CDS |
AAGGGAGAAAGTATGATTGA+TGG | 0.472563 | 7.4:+75499159 | MS.gene74134:CDS |
TGTTCCAAACTTTGTACTGC+AGG | 0.476659 | 7.4:+75498597 | MS.gene74134:CDS |
TTATGAGTGTGGTGATTCCT+AGG | 0.478815 | 7.4:+75498662 | MS.gene74134:CDS |
TATTATACCCCTAAAGATGA+AGG | 0.481135 | 7.4:+75498718 | MS.gene74134:CDS |
CCAGGAAGCTGACAATTTCA+AGG | 0.491682 | 7.4:+75498990 | MS.gene74134:CDS |
GGATCTCTTTGAAAAGTGTA+TGG | 0.494325 | 7.4:+75498360 | MS.gene74134:CDS |
TGAATAAGATCGACAAAGGT+TGG | 0.494660 | 7.4:+75499253 | MS.gene74134:CDS |
TGCTTTGCTATAGATGCTAA+TGG | 0.495524 | 7.4:+75498862 | MS.gene74134:CDS |
AGTAATCAAGTTGACATTAG+TGG | 0.495682 | 7.4:+75498181 | MS.gene74134:CDS |
GTTGAAATTATGGTTTATGA+GGG | 0.502673 | 7.4:+75498754 | MS.gene74134:CDS |
TATAGATACCAAGTGACAAA+GGG | 0.503607 | 7.4:-75498627 | None:intergenic |
TCTTGCATAATTCCTTCCCT+TGG | 0.504090 | 7.4:-75498501 | None:intergenic |
TTGTCTTGCAGATGCTAAGA+TGG | 0.509643 | 7.4:+75498396 | MS.gene74134:CDS |
AATGGTACAGAAGTATTCCT+AGG | 0.513462 | 7.4:-75498679 | None:intergenic |
GTTGCAAAATTCTTGCGAAA+GGG | 0.537742 | 7.4:+75498225 | MS.gene74134:CDS |
AGAGGAAGGTCGGGAGCAAG+AGG | 0.538852 | 7.4:-75498832 | None:intergenic |
GGTTGCAAAATTCTTGCGAA+AGG | 0.542040 | 7.4:+75498224 | MS.gene74134:CDS |
TATGATTGATGGCAACCAGC+AGG | 0.544417 | 7.4:+75499170 | MS.gene74134:CDS |
ATTTCGTGAAAGAGTTTGAG+AGG | 0.548392 | 7.4:+75498158 | MS.gene74134:CDS |
GCATACTGTGAGAGGAAGGT+CGG | 0.550540 | 7.4:-75498842 | None:intergenic |
CATACTGTGAGAGGAAGGTC+GGG | 0.559300 | 7.4:-75498841 | None:intergenic |
TGCATTACCTTCATCTTTAG+GGG | 0.565788 | 7.4:-75498725 | None:intergenic |
GATGATGTAGTCCTTGTTGG+TGG | 0.568404 | 7.4:+75498433 | MS.gene74134:CDS |
GCAAGTGAGAACAACTTGCT+TGG | 0.568418 | 7.4:+75498790 | MS.gene74134:CDS |
CAGGCTGCTTTGTTGAGTGA+AGG | 0.571905 | 7.4:+75498565 | MS.gene74134:CDS |
GACATAGATGCTATGTGTCA+GGG | 0.576550 | 7.4:+75498286 | MS.gene74134:CDS |
AAACAGACGTATCTTCCTGC+TGG | 0.578169 | 7.4:-75499185 | None:intergenic |
TAATCTTCTCTTTGTCTACA+CGG | 0.578212 | 7.4:-75499122 | None:intergenic |
AAAAGGAGATATTATGAGTG+TGG | 0.581319 | 7.4:+75498651 | MS.gene74134:CDS |
CAAAGCATACTGTGAGAGGA+AGG | 0.584073 | 7.4:-75498846 | None:intergenic |
GTATAGATACCAAGTGACAA+AGG | 0.585134 | 7.4:-75498628 | None:intergenic |
TGAAAATGGAAGATTATCAA+GGG | 0.589866 | 7.4:+75498948 | MS.gene74134:CDS |
CATAGCATCTATGTCAATTG+TGG | 0.590022 | 7.4:-75498278 | None:intergenic |
TCTATTAAACGTCTCTGCAG+TGG | 0.590731 | 7.4:+75498885 | MS.gene74134:CDS |
CTTCTGTTCATCAATTACAC+GGG | 0.593976 | 7.4:+75498315 | MS.gene74134:CDS |
ACTTCTGTTCATCAATTACA+CGG | 0.601595 | 7.4:+75498314 | MS.gene74134:CDS |
ATAGCAAAGCATACTGTGAG+AGG | 0.602824 | 7.4:-75498850 | None:intergenic |
CTTCACTCAACAAAGCAGCC+TGG | 0.604632 | 7.4:-75498564 | None:intergenic |
GCGTCCCAAAAGCCCTGAGG+AGG | 0.616816 | 7.4:+75498203 | MS.gene74134:CDS |
CAAGAGCATCAACCCTGACG+AGG | 0.635142 | 7.4:+75498519 | MS.gene74134:CDS |
GCTATGAATAAGATCGACAA+AGG | 0.637168 | 7.4:+75499249 | MS.gene74134:CDS |
CATAAGCAACAGCCTCGTCA+GGG | 0.646019 | 7.4:-75498531 | None:intergenic |
TCCTAGAAGAACCACCAACA+AGG | 0.656071 | 7.4:-75498444 | None:intergenic |
TCTGCAGTGGACGAAACCAG+TGG | 0.685856 | 7.4:+75498898 | MS.gene74134:CDS |
ATAGATACCAAGTGACAAAG+GGG | 0.717788 | 7.4:-75498626 | None:intergenic |
GTGGCGTCCCAAAAGCCCTG+AGG | 0.741708 | 7.4:+75498200 | MS.gene74134:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTACAATAACTAATGAAAA+TGG | + | chr7.4:75498934-75498953 | MS.gene74134:CDS | 15.0% |
!! | ATTAATTCTGCAATGATAAA+GGG | + | chr7.4:75499141-75499160 | MS.gene74134:CDS | 20.0% |
!! | TGCATATTTAGTTGAAATTA+TGG | + | chr7.4:75498744-75498763 | MS.gene74134:CDS | 20.0% |
!!! | TGTTTTTGTAAACTTTTTGA+AGG | + | chr7.4:75499203-75499222 | MS.gene74134:CDS | 20.0% |
! | AGAACTTTCTTACATCAATA+AGG | + | chr7.4:75498255-75498274 | MS.gene74134:CDS | 25.0% |
! | AGTTGAAATTATGGTTTATG+AGG | + | chr7.4:75498753-75498772 | MS.gene74134:CDS | 25.0% |
! | ATGAAAATGGAAGATTATCA+AGG | + | chr7.4:75498947-75498966 | MS.gene74134:CDS | 25.0% |
! | GATTAATTCTGCAATGATAA+AGG | + | chr7.4:75499140-75499159 | MS.gene74134:CDS | 25.0% |
! | GTTGAAATTATGGTTTATGA+GGG | + | chr7.4:75498754-75498773 | MS.gene74134:CDS | 25.0% |
! | TGAAAATGGAAGATTATCAA+GGG | + | chr7.4:75498948-75498967 | MS.gene74134:CDS | 25.0% |
!!! | AATTTCATTTTTATTGCCAC+TGG | - | chr7.4:75498917-75498936 | None:intergenic | 25.0% |
AAAAGGAGATATTATGAGTG+TGG | + | chr7.4:75498651-75498670 | MS.gene74134:CDS | 30.0% | |
ACTTCTGTTCATCAATTACA+CGG | + | chr7.4:75498314-75498333 | MS.gene74134:CDS | 30.0% | |
ATGCATTACCTTCATCTTTA+GGG | - | chr7.4:75498729-75498748 | None:intergenic | 30.0% | |
TAAACTTGTGTCTTCTTGAA+TGG | - | chr7.4:75498700-75498719 | None:intergenic | 30.0% | |
TAAGTTTGAGCAACTGAATA+TGG | + | chr7.4:75498339-75498358 | MS.gene74134:CDS | 30.0% | |
TAATCTTCTCTTTGTCTACA+CGG | - | chr7.4:75499125-75499144 | None:intergenic | 30.0% | |
TATAGATACCAAGTGACAAA+GGG | - | chr7.4:75498630-75498649 | None:intergenic | 30.0% | |
TATGCATTACCTTCATCTTT+AGG | - | chr7.4:75498730-75498749 | None:intergenic | 30.0% | |
TATTATACCCCTAAAGATGA+AGG | + | chr7.4:75498718-75498737 | MS.gene74134:CDS | 30.0% | |
TCACTTGGTATCTATACAAA+AGG | + | chr7.4:75498634-75498653 | MS.gene74134:CDS | 30.0% | |
! | TATTACAGGAGTTTTTCCAA+GGG | + | chr7.4:75498485-75498504 | MS.gene74134:CDS | 30.0% |
!! | AGTAATCAAGTTGACATTAG+TGG | + | chr7.4:75498181-75498200 | MS.gene74134:CDS | 30.0% |
AGTTGAAGCAAGAAATGCTT+TGG | + | chr7.4:75499038-75499057 | MS.gene74134:CDS | 35.0% | |
ATAGATACCAAGTGACAAAG+GGG | - | chr7.4:75498629-75498648 | None:intergenic | 35.0% | |
ATTTCGTGAAAGAGTTTGAG+AGG | + | chr7.4:75498158-75498177 | MS.gene74134:CDS | 35.0% | |
CATAGCATCTATGTCAATTG+TGG | - | chr7.4:75498281-75498300 | None:intergenic | 35.0% | |
CTTCTGTTCATCAATTACAC+GGG | + | chr7.4:75498315-75498334 | MS.gene74134:CDS | 35.0% | |
GCTATGAATAAGATCGACAA+AGG | + | chr7.4:75499249-75499268 | MS.gene74134:CDS | 35.0% | |
GTATAGATACCAAGTGACAA+AGG | - | chr7.4:75498631-75498650 | None:intergenic | 35.0% | |
GTTGCAAAATTCTTGCGAAA+GGG | + | chr7.4:75498225-75498244 | MS.gene74134:CDS | 35.0% | |
TAAAGTGAGACAGCTATTAC+AGG | + | chr7.4:75498471-75498490 | MS.gene74134:CDS | 35.0% | |
TGAATAAGATCGACAAAGGT+TGG | + | chr7.4:75499253-75499272 | MS.gene74134:CDS | 35.0% | |
TGCATTACCTTCATCTTTAG+GGG | - | chr7.4:75498728-75498747 | None:intergenic | 35.0% | |
TGTAATAGCTGTCTCACTTT+AGG | - | chr7.4:75498472-75498491 | None:intergenic | 35.0% | |
! | AAGGGAGAAAGTATGATTGA+TGG | + | chr7.4:75499159-75499178 | MS.gene74134:CDS | 35.0% |
! | CTATTACAGGAGTTTTTCCA+AGG | + | chr7.4:75498484-75498503 | MS.gene74134:CDS | 35.0% |
! | GGATCTCTTTGAAAAGTGTA+TGG | + | chr7.4:75498360-75498379 | MS.gene74134:CDS | 35.0% |
! | TGCTTTGCTATAGATGCTAA+TGG | + | chr7.4:75498862-75498881 | MS.gene74134:CDS | 35.0% |
!! | AATGGTACAGAAGTATTCCT+AGG | - | chr7.4:75498682-75498701 | None:intergenic | 35.0% |
!! | CTTTTTGAAGGAGCTTAAGA+TGG | + | chr7.4:75499215-75499234 | MS.gene74134:CDS | 35.0% |
ACATCCTGCAGTACAAAGTT+TGG | - | chr7.4:75498604-75498623 | None:intergenic | 40.0% | |
AGAGATTGAGAGAATGATCC+AGG | + | chr7.4:75498972-75498991 | MS.gene74134:CDS | 40.0% | |
ATAGCAAAGCATACTGTGAG+AGG | - | chr7.4:75498853-75498872 | None:intergenic | 40.0% | |
GACATAGATGCTATGTGTCA+GGG | + | chr7.4:75498286-75498305 | MS.gene74134:CDS | 40.0% | |
GGTTGCAAAATTCTTGCGAA+AGG | + | chr7.4:75498224-75498243 | MS.gene74134:CDS | 40.0% | |
GTAGATGATGTAGTCCTTGT+TGG | + | chr7.4:75498430-75498449 | MS.gene74134:CDS | 40.0% | |
TCTATTAAACGTCTCTGCAG+TGG | + | chr7.4:75498885-75498904 | MS.gene74134:CDS | 40.0% | |
TCTTGCATAATTCCTTCCCT+TGG | - | chr7.4:75498504-75498523 | None:intergenic | 40.0% | |
TGACATAGATGCTATGTGTC+AGG | + | chr7.4:75498285-75498304 | MS.gene74134:CDS | 40.0% | |
TGTTCCAAACTTTGTACTGC+AGG | + | chr7.4:75498597-75498616 | MS.gene74134:CDS | 40.0% | |
TTATGAGTGTGGTGATTCCT+AGG | + | chr7.4:75498662-75498681 | MS.gene74134:CDS | 40.0% | |
TTGTCTTGCAGATGCTAAGA+TGG | + | chr7.4:75498396-75498415 | MS.gene74134:CDS | 40.0% | |
! | AAGAATTTTGCAACCTCCTC+AGG | - | chr7.4:75498219-75498238 | None:intergenic | 40.0% |
! | AGAATTTTGCAACCTCCTCA+GGG | - | chr7.4:75498218-75498237 | None:intergenic | 40.0% |
AAACAGACGTATCTTCCTGC+TGG | - | chr7.4:75499188-75499207 | None:intergenic | 45.0% | |
CAAAGCATACTGTGAGAGGA+AGG | - | chr7.4:75498849-75498868 | None:intergenic | 45.0% | |
CCAGGAAGCTGACAATTTCA+AGG | + | chr7.4:75498990-75499009 | MS.gene74134:CDS | 45.0% | |
CCTTGAAATTGTCAGCTTCC+TGG | - | chr7.4:75498993-75499012 | None:intergenic | 45.0% | |
GATGATGTAGTCCTTGTTGG+TGG | + | chr7.4:75498433-75498452 | MS.gene74134:CDS | 45.0% | |
GATGTTACCCCTTTGTCACT+TGG | + | chr7.4:75498619-75498638 | MS.gene74134:CDS | 45.0% | |
TCCTAGAAGAACCACCAACA+AGG | - | chr7.4:75498447-75498466 | None:intergenic | 45.0% | |
! | ACAGGAGTTTTTCCAAGGGA+AGG | + | chr7.4:75498489-75498508 | MS.gene74134:CDS | 45.0% |
! | GCAAGTGAGAACAACTTGCT+TGG | + | chr7.4:75498790-75498809 | MS.gene74134:CDS | 45.0% |
! | TATGATTGATGGCAACCAGC+AGG | + | chr7.4:75499170-75499189 | MS.gene74134:CDS | 45.0% |
!! | TCCTTGTTGGTGGTTCTTCT+AGG | + | chr7.4:75498443-75498462 | MS.gene74134:CDS | 45.0% |
CATAAGCAACAGCCTCGTCA+GGG | - | chr7.4:75498534-75498553 | None:intergenic | 50.0% | |
CATACTGTGAGAGGAAGGTC+GGG | - | chr7.4:75498844-75498863 | None:intergenic | 50.0% | |
CTTCACTCAACAAAGCAGCC+TGG | - | chr7.4:75498567-75498586 | None:intergenic | 50.0% | |
GCATACTGTGAGAGGAAGGT+CGG | - | chr7.4:75498845-75498864 | None:intergenic | 50.0% | |
! | CAGGCTGCTTTGTTGAGTGA+AGG | + | chr7.4:75498565-75498584 | MS.gene74134:CDS | 50.0% |
CCATAAGCAACAGCCTCGTC+AGG | - | chr7.4:75498535-75498554 | None:intergenic | 55.0% | |
TCTGCAGTGGACGAAACCAG+TGG | + | chr7.4:75498898-75498917 | MS.gene74134:CDS | 55.0% | |
TGCTTATGGTGCAGCTGTCC+AGG | + | chr7.4:75498546-75498565 | MS.gene74134:CDS | 55.0% | |
! | CCTGACGAGGCTGTTGCTTA+TGG | + | chr7.4:75498532-75498551 | MS.gene74134:CDS | 55.0% |
! | GCAACCTCCTCAGGGCTTTT+GGG | - | chr7.4:75498210-75498229 | None:intergenic | 55.0% |
! | TGCAACCTCCTCAGGGCTTT+TGG | - | chr7.4:75498211-75498230 | None:intergenic | 55.0% |
!! | CAAGAGCATCAACCCTGACG+AGG | + | chr7.4:75498519-75498538 | MS.gene74134:CDS | 55.0% |
AGAGGAAGGTCGGGAGCAAG+AGG | - | chr7.4:75498835-75498854 | None:intergenic | 60.0% | |
GCGTCCCAAAAGCCCTGAGG+AGG | + | chr7.4:75498203-75498222 | MS.gene74134:CDS | 65.0% | |
GTGGCGTCCCAAAAGCCCTG+AGG | + | chr7.4:75498200-75498219 | MS.gene74134:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.4 | gene | 75498148 | 75499305 | 75498148 | ID=MS.gene74134 |
chr7.4 | mRNA | 75498148 | 75499305 | 75498148 | ID=MS.gene74134.t1;Parent=MS.gene74134 |
chr7.4 | exon | 75498148 | 75499305 | 75498148 | ID=MS.gene74134.t1.exon1;Parent=MS.gene74134.t1 |
chr7.4 | CDS | 75498148 | 75499305 | 75498148 | ID=cds.MS.gene74134.t1;Parent=MS.gene74134.t1 |
Gene Sequence |
Protein sequence |