Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76239.t1 | XP_013470262.1 | 97 | 298 | 9 | 0 | 1 | 298 | 1 | 298 | 2.50E-160 | 574.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76239.t1 | Q9SEZ6 | 70.9 | 292 | 84 | 1 | 7 | 298 | 6 | 296 | 7.9e-123 | 441.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76239.t1 | A0A072W210 | 97.0 | 298 | 9 | 0 | 1 | 298 | 1 | 298 | 1.8e-160 | 574.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050438 | MS.gene76239 | 0.828627 | 8.09E-55 | -1.69E-46 |
| MS.gene050442 | MS.gene76239 | 0.804711 | 1.89E-49 | -1.69E-46 |
| MS.gene050586 | MS.gene76239 | 0.815765 | 7.82E-52 | -1.69E-46 |
| MS.gene050719 | MS.gene76239 | 0.804908 | 1.72E-49 | -1.69E-46 |
| MS.gene050721 | MS.gene76239 | 0.803353 | 3.63E-49 | -1.69E-46 |
| MS.gene050724 | MS.gene76239 | 0.811988 | 5.31E-51 | -1.69E-46 |
| MS.gene050815 | MS.gene76239 | 0.808115 | 3.63E-50 | -1.69E-46 |
| MS.gene052665 | MS.gene76239 | 0.803541 | 3.32E-49 | -1.69E-46 |
| MS.gene053074 | MS.gene76239 | 0.822696 | 2.06E-53 | -1.69E-46 |
| MS.gene054185 | MS.gene76239 | 0.811035 | 8.56E-51 | -1.69E-46 |
| MS.gene057260 | MS.gene76239 | 0.808116 | 3.63E-50 | -1.69E-46 |
| MS.gene058168 | MS.gene76239 | 0.827448 | 1.56E-54 | -1.69E-46 |
| MS.gene058906 | MS.gene76239 | 0.804132 | 2.50E-49 | -1.69E-46 |
| MS.gene060803 | MS.gene76239 | 0.80254 | 5.34E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene000365 | MS.gene76239 | PPI |
| MS.gene066552 | MS.gene76239 | PPI |
| MS.gene76239 | MS.gene78156 | PPI |
| MS.gene76239 | MS.gene066551 | PPI |
| MS.gene76239 | MS.gene43369 | PPI |
| MS.gene76239 | MS.gene41343 | PPI |
| MS.gene76239 | MS.gene53708 | PPI |
| MS.gene76239 | MS.gene071261 | PPI |
| MS.gene76239 | MS.gene045765 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76239.t1 | MTR_1g111980 | 97.651 | 298 | 7 | 0 | 1 | 298 | 1 | 298 | 0.0 | 604 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76239.t1 | AT2G25100 | 71.331 | 293 | 83 | 1 | 6 | 298 | 5 | 296 | 1.63e-165 | 461 |
| MS.gene76239.t1 | AT2G25100 | 66.212 | 293 | 79 | 2 | 6 | 298 | 5 | 277 | 1.56e-148 | 418 |
Find 74 sgRNAs with CRISPR-Local
Find 259 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAATTGAAATTAAACAATT+TGG | 0.119349 | 1.1:+79032779 | MS.gene76239:CDS |
| CTGCCATGGGCCTCGTTGAT+AGG | 0.233916 | 1.1:+79030527 | MS.gene76239:CDS |
| TGTTTACTTCTTGAGCATTT+TGG | 0.237684 | 1.1:-79030376 | None:intergenic |
| TTGAAAGCCAATGATTCTAT+TGG | 0.257884 | 1.1:+79030315 | MS.gene76239:CDS |
| CGTTGATAGGGTGCTCAAAA+TGG | 0.268094 | 1.1:+79030540 | MS.gene76239:CDS |
| GATCACAAACATTCTATCTT+TGG | 0.271558 | 1.1:+79031218 | MS.gene76239:CDS |
| GCAACCACAAATTTGATAGA+TGG | 0.310246 | 1.1:-79030848 | None:intergenic |
| TATTTCTTCGCTTCTCCTCT+TGG | 0.315790 | 1.1:-79032814 | None:intergenic |
| CAATTGAAATTAAACAATTT+GGG | 0.333217 | 1.1:+79032780 | MS.gene76239:CDS |
| CAAGTGGTAAAGGGCGTTCT+AGG | 0.341183 | 1.1:+79032841 | MS.gene76239:CDS |
| AACATTAGTCAGGTTTAGTT+GGG | 0.344847 | 1.1:+79031247 | MS.gene76239:CDS |
| GGCATCGGAGGCTTGCATAA+TGG | 0.349327 | 1.1:+79029212 | MS.gene76239:CDS |
| GTCCTTGGTCCTATGGTCTA+TGG | 0.350982 | 1.1:+79029261 | MS.gene76239:CDS |
| TCTAGCCAAGACTTGGTTGC+AGG | 0.363522 | 1.1:-79031194 | None:intergenic |
| CAAATTTGTGGTTGCAAAGA+AGG | 0.370740 | 1.1:+79030856 | MS.gene76239:CDS |
| CAAGCCTCCGATGCCCATTC+CGG | 0.377392 | 1.1:-79029204 | None:intergenic |
| ATCTGAAGCTGCTATGGTTC+CGG | 0.379212 | 1.1:+79029185 | MS.gene76239:CDS |
| AGCTGCTATGGTTCCGGAAT+GGG | 0.380956 | 1.1:+79029191 | MS.gene76239:CDS |
| GCATCGGAGGCTTGCATAAT+GGG | 0.384725 | 1.1:+79029213 | MS.gene76239:CDS |
| CAACATTAGTCAGGTTTAGT+TGG | 0.397868 | 1.1:+79031246 | MS.gene76239:CDS |
| ATTGATACAGTTGGAGATCC+AGG | 0.399985 | 1.1:+79030794 | MS.gene76239:CDS |
| GGTGGCAGCAATAATAATAA+TGG | 0.411127 | 1.1:+79032750 | MS.gene76239:CDS |
| GATAACATTCACAGGAACTT+TGG | 0.418465 | 1.1:+79031053 | MS.gene76239:CDS |
| CAACTAAACCTGACTAATGT+TGG | 0.422536 | 1.1:-79031245 | None:intergenic |
| AGGTCCTGTCCTTGGTCCTA+TGG | 0.426005 | 1.1:+79029254 | MS.gene76239:CDS |
| GAGATCGAGCTATAAGAGAT+TGG | 0.427593 | 1.1:+79031012 | MS.gene76239:CDS |
| AGCCCATCCAATAGAATCAT+TGG | 0.430568 | 1.1:-79030322 | None:intergenic |
| GAAATAGAATCAAGTGGTAA+AGG | 0.437381 | 1.1:+79032831 | MS.gene76239:CDS |
| CAGGTTTATATTGATACAGT+TGG | 0.452563 | 1.1:+79030785 | MS.gene76239:intron |
| TTCGCTTCTCCTCTTGGATG+TGG | 0.454880 | 1.1:-79032808 | None:intergenic |
| AAGGTGGCACTGAAGTCTTA+TGG | 0.459123 | 1.1:+79031291 | MS.gene76239:CDS |
| GTGATCTTCTAGCCAAGACT+TGG | 0.469330 | 1.1:-79031201 | None:intergenic |
| AAATAGAATCAAGTGGTAAA+GGG | 0.471476 | 1.1:+79032832 | MS.gene76239:CDS |
| TGCCATGGGCCTCGTTGATA+GGG | 0.471507 | 1.1:+79030528 | MS.gene76239:CDS |
| GTTGATAGGGTGCTCAAAAT+GGG | 0.472159 | 1.1:+79030541 | MS.gene76239:CDS |
| ATACTTGCACCACTGACAAC+AGG | 0.477284 | 1.1:-79030893 | None:intergenic |
| AACTTTGGCTCTGGATATCC+CGG | 0.481184 | 1.1:+79031068 | MS.gene76239:CDS |
| AATGGGATCTGAAGCTGCTA+TGG | 0.497249 | 1.1:+79029179 | None:intergenic |
| AGCTTCGCTTCATATTTCCC+TGG | 0.499923 | 1.1:-79030812 | None:intergenic |
| GCGGGAAGAGGTCCTGTCCT+TGG | 0.500138 | 1.1:+79029246 | MS.gene76239:CDS |
| ATTCACAGGAACTTTGGCTC+TGG | 0.501553 | 1.1:+79031059 | MS.gene76239:CDS |
| AGATCGAGCTATAAGAGATT+GGG | 0.506461 | 1.1:+79031013 | MS.gene76239:CDS |
| GACACTAAAAGAAGAGAAGA+GGG | 0.517003 | 1.1:+79030275 | MS.gene76239:CDS |
| TAGATCCTGCAACCAAGTCT+TGG | 0.525753 | 1.1:+79031189 | MS.gene76239:intron |
| AAGCTGCTATGGTTCCGGAA+TGG | 0.527575 | 1.1:+79029190 | MS.gene76239:CDS |
| AAGCCAATGATTCTATTGGA+TGG | 0.528501 | 1.1:+79030319 | MS.gene76239:CDS |
| TGCGAAACTCAAAGTAGCTA+AGG | 0.529377 | 1.1:-79029316 | None:intergenic |
| GGAATCGACGAAGCGGGAAG+AGG | 0.536240 | 1.1:+79029234 | MS.gene76239:CDS |
| TATGGTTCCGGAATGGGCAT+CGG | 0.560760 | 1.1:+79029197 | MS.gene76239:CDS |
| TTAGCTACTTTGAGTTTCGC+AGG | 0.563355 | 1.1:+79029318 | MS.gene76239:CDS |
| AGTCTGCTGATAACATTCAC+AGG | 0.575679 | 1.1:+79031045 | MS.gene76239:CDS |
| AGACACTAAAAGAAGAGAAG+AGG | 0.576756 | 1.1:+79030274 | MS.gene76239:CDS |
| CATAATGGGAATCGACGAAG+CGG | 0.581985 | 1.1:+79029227 | MS.gene76239:CDS |
| AGTCTTTATCCTGTTGTCAG+TGG | 0.587707 | 1.1:+79030884 | MS.gene76239:CDS |
| TGGTGCAAGTATAGTTGCAA+AGG | 0.593002 | 1.1:+79030904 | MS.gene76239:CDS |
| GGTTCCGGAATGGGCATCGG+AGG | 0.594499 | 1.1:+79029200 | MS.gene76239:CDS |
| TTGATACAGTTGGAGATCCA+GGG | 0.597039 | 1.1:+79030795 | MS.gene76239:CDS |
| CACCCTATCAACGAGGCCCA+TGG | 0.597149 | 1.1:-79030530 | None:intergenic |
| AGCCAATGATTCTATTGGAT+GGG | 0.597314 | 1.1:+79030320 | MS.gene76239:CDS |
| GACAACAGGATAAAGACTAT+CGG | 0.599607 | 1.1:-79030879 | None:intergenic |
| ATAATGGGAATCGACGAAGC+GGG | 0.603901 | 1.1:+79029228 | MS.gene76239:CDS |
| GATATCACATGACTCTGCCA+TGG | 0.604388 | 1.1:+79030513 | MS.gene76239:CDS |
| TATAAACAACCATAGACCAT+AGG | 0.606448 | 1.1:-79029270 | None:intergenic |
| TGTTGATGTCATTGACCCAA+AGG | 0.610587 | 1.1:+79030344 | MS.gene76239:CDS |
| ATATCACATGACTCTGCCAT+GGG | 0.613919 | 1.1:+79030514 | MS.gene76239:CDS |
| ACATTAGTCAGGTTTAGTTG+GGG | 0.616439 | 1.1:+79031248 | MS.gene76239:CDS |
| GCAATAATAATAATGGCAAG+AGG | 0.617191 | 1.1:+79032757 | MS.gene76239:CDS |
| GAGTCTGACTTGGATGAAGA+TGG | 0.620122 | 1.1:+79032729 | MS.gene76239:CDS |
| AGCGAAGAAATAGAATCAAG+TGG | 0.622154 | 1.1:+79032825 | MS.gene76239:CDS |
| TAGACCATAGGACCAAGGAC+AGG | 0.637946 | 1.1:-79029258 | None:intergenic |
| TGGGTTTCACCACATCCAAG+AGG | 0.671053 | 1.1:+79032799 | MS.gene76239:CDS |
| AACCATAGACCATAGGACCA+AGG | 0.685457 | 1.1:-79029263 | None:intergenic |
| TTTGGCTCTGGATATCCCGG+AGG | 0.726118 | 1.1:+79031071 | MS.gene76239:CDS |
| TCTGACTTGGATGAAGATGG+TGG | 0.731629 | 1.1:+79032732 | MS.gene76239:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAAGAATTATAATTAAAAA+TGG | - | chr1.1:79029410-79029429 | None:intergenic | 10.0% |
| !! | TTCTAATTAAAATTGAAAAT+AGG | + | chr1.1:79031545-79031564 | MS.gene76239:intron | 10.0% |
| !! | AAATATAACCAAATAAATAG+TGG | - | chr1.1:79029535-79029554 | None:intergenic | 15.0% |
| !! | ATTAAATTCCATTATGTATA+TGG | + | chr1.1:79032606-79032625 | MS.gene76239:intron | 15.0% |
| !! | CAATTGAAATTAAACAATTT+GGG | + | chr1.1:79032780-79032799 | MS.gene76239:CDS | 15.0% |
| !! | TTAAATTCCATTATGTATAT+GGG | + | chr1.1:79032607-79032626 | MS.gene76239:intron | 15.0% |
| !!! | CATTTTAGTTACAATAAATA+TGG | + | chr1.1:79031149-79031168 | MS.gene76239:intron | 15.0% |
| !! | AAAAAAAAAGCAAAACCAAA+AGG | - | chr1.1:79030415-79030434 | None:intergenic | 20.0% |
| !! | AATTATTGCCACTATTTATT+TGG | + | chr1.1:79029524-79029543 | MS.gene76239:intron | 20.0% |
| !! | AGATGTGAAATGTATAATTT+GGG | + | chr1.1:79030757-79030776 | MS.gene76239:intron | 20.0% |
| !! | ATGAGAAATATATTGTTTGT+GGG | - | chr1.1:79032569-79032588 | None:intergenic | 20.0% |
| !! | CTACTATCATTAATTCATTA+TGG | - | chr1.1:79030165-79030184 | None:intergenic | 20.0% |
| !! | CTTATTTATCTGTTAAAACT+TGG | + | chr1.1:79032693-79032712 | MS.gene76239:intron | 20.0% |
| !! | GCAATTGAAATTAAACAATT+TGG | + | chr1.1:79032779-79032798 | MS.gene76239:CDS | 20.0% |
| !! | TAAATTCCATTATGTATATG+GGG | + | chr1.1:79032608-79032627 | MS.gene76239:intron | 20.0% |
| !! | TCATTTGATAAGTATTAAGT+AGG | + | chr1.1:79032349-79032368 | MS.gene76239:intron | 20.0% |
| !! | TTTAAAGAATCCAAAACTAA+TGG | - | chr1.1:79029445-79029464 | None:intergenic | 20.0% |
| !!! | AAAACTTGGACTTTTTTATA+GGG | + | chr1.1:79032707-79032726 | MS.gene76239:intron | 20.0% |
| !!! | AGAAAGGTATATTAATTTTC+AGG | + | chr1.1:79032134-79032153 | MS.gene76239:intron | 20.0% |
| !!! | CAATAAATATGGTTATGTTT+TGG | + | chr1.1:79031160-79031179 | MS.gene76239:intron | 20.0% |
| !!! | CTTTCTTTTCAATTTAATGA+TGG | + | chr1.1:79030444-79030463 | MS.gene76239:intron | 20.0% |
| !!! | TAAAACTTGGACTTTTTTAT+AGG | + | chr1.1:79032706-79032725 | MS.gene76239:intron | 20.0% |
| !!! | TAATGAGTTGGATAAAAATA+TGG | + | chr1.1:79030004-79030023 | MS.gene76239:intron | 20.0% |
| !!! | TATTTGAAACTTTTGTTTCT+GGG | + | chr1.1:79032013-79032032 | MS.gene76239:intron | 20.0% |
| !!! | TTATTTGAAACTTTTGTTTC+TGG | + | chr1.1:79032012-79032031 | MS.gene76239:intron | 20.0% |
| !!! | TTGATTTGATATTGTTATTC+TGG | - | chr1.1:79031908-79031927 | None:intergenic | 20.0% |
| !!! | TTTTCCCAACATATTTTAAT+GGG | + | chr1.1:79030587-79030606 | MS.gene76239:intron | 20.0% |
| ! | AAATAGAATCAAGTGGTAAA+GGG | + | chr1.1:79032832-79032851 | MS.gene76239:CDS | 25.0% |
| ! | AACTAGAATCATTATCAGAA+AGG | + | chr1.1:79032118-79032137 | MS.gene76239:intron | 25.0% |
| ! | AATTCCAAAAATTACAAACG+TGG | - | chr1.1:79031939-79031958 | None:intergenic | 25.0% |
| ! | ACTGAAAACAAACTCAAATA+AGG | - | chr1.1:79031441-79031460 | None:intergenic | 25.0% |
| ! | AGAAATGTACACTTATGTAT+AGG | + | chr1.1:79030201-79030220 | MS.gene76239:intron | 25.0% |
| ! | ATATTTCTCATGAAAGATGA+AGG | + | chr1.1:79032578-79032597 | MS.gene76239:intron | 25.0% |
| ! | ATTCCAAAAATTACAAACGT+GGG | - | chr1.1:79031938-79031957 | None:intergenic | 25.0% |
| ! | CAAACTATACACATAGAAAT+AGG | + | chr1.1:79029558-79029577 | MS.gene76239:intron | 25.0% |
| ! | CATGAGAAATATATTGTTTG+TGG | - | chr1.1:79032570-79032589 | None:intergenic | 25.0% |
| ! | CATTAAAATATGTTGGGAAA+AGG | - | chr1.1:79030588-79030607 | None:intergenic | 25.0% |
| ! | CTATAACATATCAACTATCA+AGG | - | chr1.1:79032217-79032236 | None:intergenic | 25.0% |
| ! | GAGATGTGAAATGTATAATT+TGG | + | chr1.1:79030756-79030775 | MS.gene76239:intron | 25.0% |
| ! | TAACACTTGGAACATAAAAA+TGG | - | chr1.1:79032656-79032675 | None:intergenic | 25.0% |
| ! | TAATTAAAAATGGAAAGCTC+TGG | - | chr1.1:79029400-79029419 | None:intergenic | 25.0% |
| ! | TCTTCCCATTAAAATATGTT+GGG | - | chr1.1:79030594-79030613 | None:intergenic | 25.0% |
| ! | TGAGAAATATATTGTTTGTG+GGG | - | chr1.1:79032568-79032587 | None:intergenic | 25.0% |
| ! | TTCCTGTTAAAATTACAACA+AGG | - | chr1.1:79030475-79030494 | None:intergenic | 25.0% |
| ! | TTCTTCCCATTAAAATATGT+TGG | - | chr1.1:79030595-79030614 | None:intergenic | 25.0% |
| !! | AATGATTCTAGTTACTTAAG+TGG | - | chr1.1:79032111-79032130 | None:intergenic | 25.0% |
| !! | ATGATTCTAGTTACTTAAGT+GGG | - | chr1.1:79032110-79032129 | None:intergenic | 25.0% |
| !! | CTTGATAGTTGATATGTTAT+AGG | + | chr1.1:79032215-79032234 | MS.gene76239:intron | 25.0% |
| !! | TCAGTTTTCAAAACATTTTC+TGG | + | chr1.1:79031456-79031475 | MS.gene76239:intron | 25.0% |
| !! | TTTTCCATCTATCAAATTTG+TGG | + | chr1.1:79030844-79030863 | MS.gene76239:CDS | 25.0% |
| !! | TTTTTCACTTCCTTAGTTTA+CGG | + | chr1.1:79031862-79031881 | MS.gene76239:intron | 25.0% |
| !!! | CTTTTCCCAACATATTTTAA+TGG | + | chr1.1:79030586-79030605 | MS.gene76239:intron | 25.0% |
| !!! | GTTTGGTTTCATAACATTTT+CGG | + | chr1.1:79031380-79031399 | MS.gene76239:intron | 25.0% |
| !!! | TAATGCTAATCCATTAGTTT+TGG | + | chr1.1:79029432-79029451 | MS.gene76239:intron | 25.0% |
| !!! | TTCCTTGTTGTAATTTTAAC+AGG | + | chr1.1:79030470-79030489 | MS.gene76239:intron | 25.0% |
| !!! | TTCTTTAAAATATGCGTGTT+TGG | + | chr1.1:79029456-79029475 | MS.gene76239:intron | 25.0% |
| !!! | TTGTTTTCTAAGGATTTGTT+TGG | + | chr1.1:79031363-79031382 | MS.gene76239:intron | 25.0% |
| !!! | TTTGGTTTCATAACATTTTC+GGG | + | chr1.1:79031381-79031400 | MS.gene76239:intron | 25.0% |
| AAAAATTACAAACGTGGGAT+TGG | - | chr1.1:79031933-79031952 | None:intergenic | 30.0% | |
| AAATATATTGTTTGTGGGGT+GGG | - | chr1.1:79032564-79032583 | None:intergenic | 30.0% | |
| AAATCCTTAGAAAACAAGTG+CGG | - | chr1.1:79031360-79031379 | None:intergenic | 30.0% | |
| AACATGAAGTTAGTGGAATT+TGG | - | chr1.1:79032075-79032094 | None:intergenic | 30.0% | |
| AACATTAGTCAGGTTTAGTT+GGG | + | chr1.1:79031247-79031266 | MS.gene76239:CDS | 30.0% | |
| AAGGTGGTATTTACTATAAC+TGG | - | chr1.1:79031422-79031441 | None:intergenic | 30.0% | |
| AATGAAAACAGAAACCAAAG+AGG | + | chr1.1:79031582-79031601 | MS.gene76239:intron | 30.0% | |
| ACCTATATTAGAAAAGATGG+TGG | + | chr1.1:79029844-79029863 | MS.gene76239:intron | 30.0% | |
| AGATCTAGAGATTAATGAGT+TGG | + | chr1.1:79029992-79030011 | MS.gene76239:intron | 30.0% | |
| AGCACCTATATTAGAAAAGA+TGG | + | chr1.1:79029841-79029860 | MS.gene76239:intron | 30.0% | |
| ATCTTTCAAAGTTACTTGTG+AGG | + | chr1.1:79032312-79032331 | MS.gene76239:intron | 30.0% | |
| ATGACATTAAAGAGAGAGTT+CGG | + | chr1.1:79029816-79029835 | MS.gene76239:intron | 30.0% | |
| ATTAATGTTGACATACTGCT+AGG | + | chr1.1:79031731-79031750 | MS.gene76239:intron | 30.0% | |
| ATTGGATAACATGAAGTTAG+TGG | - | chr1.1:79032082-79032101 | None:intergenic | 30.0% | |
| CAGGTTTATATTGATACAGT+TGG | + | chr1.1:79030785-79030804 | MS.gene76239:intron | 30.0% | |
| CTGAACAGAACAGTATAAAA+AGG | - | chr1.1:79031620-79031639 | None:intergenic | 30.0% | |
| CTTATCCCACTAAATAGAAT+CGG | - | chr1.1:79030069-79030088 | None:intergenic | 30.0% | |
| GAAAACAAACTCAAATAAGG+TGG | - | chr1.1:79031438-79031457 | None:intergenic | 30.0% | |
| GAAATAGAATCAAGTGGTAA+AGG | + | chr1.1:79032831-79032850 | MS.gene76239:CDS | 30.0% | |
| GATCACAAACATTCTATCTT+TGG | + | chr1.1:79031218-79031237 | MS.gene76239:CDS | 30.0% | |
| GCAATAATAATAATGGCAAG+AGG | + | chr1.1:79032757-79032776 | MS.gene76239:CDS | 30.0% | |
| GCAGTATGTCAACATTAATA+TGG | - | chr1.1:79031730-79031749 | None:intergenic | 30.0% | |
| GTGTAAGGGGAAAAATTTAT+CGG | + | chr1.1:79029665-79029684 | MS.gene76239:intron | 30.0% | |
| TAAACCATCAAATTCAAGCT+GGG | + | chr1.1:79029586-79029605 | MS.gene76239:intron | 30.0% | |
| TACGCTTCTTATAAGTACTT+GGG | + | chr1.1:79030700-79030719 | MS.gene76239:intron | 30.0% | |
| TATAAACAACCATAGACCAT+AGG | - | chr1.1:79029273-79029292 | None:intergenic | 30.0% | |
| TTGAAAGCCAATGATTCTAT+TGG | + | chr1.1:79030315-79030334 | MS.gene76239:CDS | 30.0% | |
| TTTCCTTTGTTGACAACAAA+AGG | - | chr1.1:79032399-79032418 | None:intergenic | 30.0% | |
| ! | AAAGTACTACTCAAGTGTAA+GGG | + | chr1.1:79029651-79029670 | MS.gene76239:intron | 30.0% |
| ! | AACCTTTAATCCAACCTTTT+AGG | + | chr1.1:79030983-79031002 | MS.gene76239:intron | 30.0% |
| ! | AATCCCACGTTTGTAATTTT+TGG | + | chr1.1:79031932-79031951 | MS.gene76239:intron | 30.0% |
| ! | AGTTTTCCCCATATACATAA+TGG | - | chr1.1:79032617-79032636 | None:intergenic | 30.0% |
| ! | ATCCATACGACATATTTTGT+TGG | - | chr1.1:79030677-79030696 | None:intergenic | 30.0% |
| ! | TCCACCATCTTTTCTAATAT+AGG | - | chr1.1:79029848-79029867 | None:intergenic | 30.0% |
| ! | TGATTCTAGTTACTTAAGTG+GGG | - | chr1.1:79032109-79032128 | None:intergenic | 30.0% |
| ! | TGGTATATGATAGAGCATTA+TGG | + | chr1.1:79030024-79030043 | MS.gene76239:intron | 30.0% |
| ! | TGTTTACTTCTTGAGCATTT+TGG | - | chr1.1:79030379-79030398 | None:intergenic | 30.0% |
| ! | TTTTCACTTCCTTAGTTTAC+GGG | + | chr1.1:79031863-79031882 | MS.gene76239:intron | 30.0% |
| !! | AAAAAAGTGACTTGTTTCTG+TGG | - | chr1.1:79032288-79032307 | None:intergenic | 30.0% |
| !! | AAAGGCACTGCAAAAAATAT+AGG | - | chr1.1:79032381-79032400 | None:intergenic | 30.0% |
| !!! | ACTTGCAGCTCTTATTTTAA+AGG | + | chr1.1:79031272-79031291 | MS.gene76239:CDS | 30.0% |
| !!! | TCAAAGTAGCTAAGGTTTTT+TGG | - | chr1.1:79029311-79029330 | None:intergenic | 30.0% |
| AAAGCTGTAGGTATTATGCT+TGG | + | chr1.1:79032472-79032491 | MS.gene76239:intron | 35.0% | |
| AAGCAAAACCAAAAGGACTA+AGG | - | chr1.1:79030408-79030427 | None:intergenic | 35.0% | |
| AAGCCAATGATTCTATTGGA+TGG | + | chr1.1:79030319-79030338 | MS.gene76239:CDS | 35.0% | |
| AAGGAGAGTAGATCAAATGA+AGG | + | chr1.1:79029921-79029940 | MS.gene76239:intron | 35.0% | |
| AAGTACTACTCAAGTGTAAG+GGG | + | chr1.1:79029652-79029671 | MS.gene76239:intron | 35.0% | |
| AATATATTGTTTGTGGGGTG+GGG | - | chr1.1:79032563-79032582 | None:intergenic | 35.0% | |
| ACATTAGTCAGGTTTAGTTG+GGG | + | chr1.1:79031248-79031267 | MS.gene76239:CDS | 35.0% | |
| AGACACTAAAAGAAGAGAAG+AGG | + | chr1.1:79030274-79030293 | MS.gene76239:CDS | 35.0% | |
| AGACTCGTAGATTTGTACTA+AGG | + | chr1.1:79029902-79029921 | MS.gene76239:intron | 35.0% | |
| AGATCGAGCTATAAGAGATT+GGG | + | chr1.1:79031013-79031032 | MS.gene76239:CDS | 35.0% | |
| AGCCAATGATTCTATTGGAT+GGG | + | chr1.1:79030320-79030339 | MS.gene76239:CDS | 35.0% | |
| AGCGAAGAAATAGAATCAAG+TGG | + | chr1.1:79032825-79032844 | MS.gene76239:CDS | 35.0% | |
| AGTGAAATAGTCCTTGAGAA+AGG | + | chr1.1:79032188-79032207 | MS.gene76239:intron | 35.0% | |
| ATGTATAATTTGGGCTCTTC+AGG | + | chr1.1:79030766-79030785 | MS.gene76239:intron | 35.0% | |
| CAAAGTTTGTAAGAGAAGAC+TGG | - | chr1.1:79032511-79032530 | None:intergenic | 35.0% | |
| CAAATTTGTGGTTGCAAAGA+AGG | + | chr1.1:79030856-79030875 | MS.gene76239:CDS | 35.0% | |
| CAACATTAGTCAGGTTTAGT+TGG | + | chr1.1:79031246-79031265 | MS.gene76239:CDS | 35.0% | |
| CAACTAAACCTGACTAATGT+TGG | - | chr1.1:79031248-79031267 | None:intergenic | 35.0% | |
| CAGAGATAAGAATGTTGCAT+TGG | + | chr1.1:79029756-79029775 | MS.gene76239:intron | 35.0% | |
| CGATTCTATTTAGTGGGATA+AGG | + | chr1.1:79030067-79030086 | MS.gene76239:intron | 35.0% | |
| GAAATATATTGTTTGTGGGG+TGG | - | chr1.1:79032565-79032584 | None:intergenic | 35.0% | |
| GACAACAGGATAAAGACTAT+CGG | - | chr1.1:79030882-79030901 | None:intergenic | 35.0% | |
| GACACTAAAAGAAGAGAAGA+GGG | + | chr1.1:79030275-79030294 | MS.gene76239:CDS | 35.0% | |
| GACCTAAAAGGTTGGATTAA+AGG | - | chr1.1:79030988-79031007 | None:intergenic | 35.0% | |
| GATAACATTCACAGGAACTT+TGG | + | chr1.1:79031053-79031072 | MS.gene76239:CDS | 35.0% | |
| GCAACCACAAATTTGATAGA+TGG | - | chr1.1:79030851-79030870 | None:intergenic | 35.0% | |
| GGTGGCAGCAATAATAATAA+TGG | + | chr1.1:79032750-79032769 | MS.gene76239:CDS | 35.0% | |
| GTAAACCATCAAATTCAAGC+TGG | + | chr1.1:79029585-79029604 | MS.gene76239:intron | 35.0% | |
| GTACGCTTCTTATAAGTACT+TGG | + | chr1.1:79030699-79030718 | MS.gene76239:intron | 35.0% | |
| GTTGTGAAAATAGCACAAGT+TGG | - | chr1.1:79032244-79032263 | None:intergenic | 35.0% | |
| TATCAAGGATACCTTTCTCA+AGG | - | chr1.1:79032202-79032221 | None:intergenic | 35.0% | |
| TCAATAATCCTGAAAGCTGT+AGG | + | chr1.1:79032460-79032479 | MS.gene76239:intron | 35.0% | |
| TGAAGTTAAGAGAAGAGAGT+AGG | - | chr1.1:79029346-79029365 | None:intergenic | 35.0% | |
| TGACATTAAAGAGAGAGTTC+GGG | + | chr1.1:79029817-79029836 | MS.gene76239:intron | 35.0% | |
| TGCCAACAAAATATGTCGTA+TGG | + | chr1.1:79030672-79030691 | MS.gene76239:intron | 35.0% | |
| TGTCACATATGCATCTTTGT+TGG | + | chr1.1:79030240-79030259 | MS.gene76239:intron | 35.0% | |
| TTAGTGCAGGAAATTCTACA+CGG | - | chr1.1:79030942-79030961 | None:intergenic | 35.0% | |
| TTGAAGCATGAACAATGCAT+GGG | + | chr1.1:79032534-79032553 | MS.gene76239:intron | 35.0% | |
| ! | ATGTAGCCGATTCTATTTAG+TGG | + | chr1.1:79030060-79030079 | MS.gene76239:intron | 35.0% |
| ! | ATTCTAGTTACTTAAGTGGG+GGG | - | chr1.1:79032107-79032126 | None:intergenic | 35.0% |
| ! | GATTCTAGTTACTTAAGTGG+GGG | - | chr1.1:79032108-79032127 | None:intergenic | 35.0% |
| ! | TGTAGCCGATTCTATTTAGT+GGG | + | chr1.1:79030061-79030080 | MS.gene76239:intron | 35.0% |
| ! | TTTTTATAGGGAGTCTGACT+TGG | + | chr1.1:79032719-79032738 | MS.gene76239:intron | 35.0% |
| !! | AATTACTTTTACAGCCCAAG+AGG | - | chr1.1:79031966-79031985 | None:intergenic | 35.0% |
| !! | GAAAGTACTACTCAAGTGTA+AGG | + | chr1.1:79029650-79029669 | MS.gene76239:intron | 35.0% |
| !! | TAGAAAAGATGGTGGAAACT+AGG | + | chr1.1:79029852-79029871 | MS.gene76239:intron | 35.0% |
| !! | TATACCGCACTTGTTTTCTA+AGG | + | chr1.1:79031353-79031372 | MS.gene76239:intron | 35.0% |
| !! | TTGGTTTTCCAACATTAGTC+AGG | + | chr1.1:79031237-79031256 | MS.gene76239:CDS | 35.0% |
| !!! | AGTAGCTAAGGTTTTTTGGT+AGG | - | chr1.1:79029307-79029326 | None:intergenic | 35.0% |
| !!! | TGCAGCTCTTATTTTAAAGG+TGG | + | chr1.1:79031275-79031294 | MS.gene76239:CDS | 35.0% |
| !!! | TTTTGGAATTTGCTCCTCTT+GGG | + | chr1.1:79031949-79031968 | MS.gene76239:intron | 35.0% |
| !!! | TTTTTGGAATTTGCTCCTCT+TGG | + | chr1.1:79031948-79031967 | MS.gene76239:intron | 35.0% |
| AAGGATAGTCAGATCACTAG+AGG | + | chr1.1:79029940-79029959 | MS.gene76239:intron | 40.0% | |
| AAGGTTGGATTAAAGGTTGC+AGG | - | chr1.1:79030981-79031000 | None:intergenic | 40.0% | |
| AATGTTGTATGGGACAGTGT+TGG | + | chr1.1:79029696-79029715 | MS.gene76239:intron | 40.0% | |
| ACGGTAAAACTTCTTAGTGC+AGG | - | chr1.1:79030955-79030974 | None:intergenic | 40.0% | |
| ACTGTCCCATACAACATTGT+TGG | - | chr1.1:79029694-79029713 | None:intergenic | 40.0% | |
| AGCAGTTAAGCTGCTTATGA+TGG | - | chr1.1:79031769-79031788 | None:intergenic | 40.0% | |
| AGCCCATCCAATAGAATCAT+TGG | - | chr1.1:79030325-79030344 | None:intergenic | 40.0% | |
| AGTCTGCTGATAACATTCAC+AGG | + | chr1.1:79031045-79031064 | MS.gene76239:CDS | 40.0% | |
| AGTCTTTATCCTGTTGTCAG+TGG | + | chr1.1:79030884-79030903 | MS.gene76239:CDS | 40.0% | |
| ATATATTGTTTGTGGGGTGG+GGG | - | chr1.1:79032562-79032581 | None:intergenic | 40.0% | |
| ATATCACATGACTCTGCCAT+GGG | + | chr1.1:79030514-79030533 | MS.gene76239:CDS | 40.0% | |
| ATCTTGAAGCCCGTAAACTA+AGG | - | chr1.1:79031875-79031894 | None:intergenic | 40.0% | |
| ATGTTGTATGGGACAGTGTT+GGG | + | chr1.1:79029697-79029716 | MS.gene76239:intron | 40.0% | |
| ATTGATACAGTTGGAGATCC+AGG | + | chr1.1:79030794-79030813 | MS.gene76239:CDS | 40.0% | |
| CTTGAAGCATGAACAATGCA+TGG | + | chr1.1:79032533-79032552 | MS.gene76239:intron | 40.0% | |
| GAGATCGAGCTATAAGAGAT+TGG | + | chr1.1:79031012-79031031 | MS.gene76239:CDS | 40.0% | |
| GATTAAAGGTTGCAGGTAGA+CGG | - | chr1.1:79030974-79030993 | None:intergenic | 40.0% | |
| GCATAATACCTACAGCTTTC+AGG | - | chr1.1:79032471-79032490 | None:intergenic | 40.0% | |
| GGAGACCAACAATGTTGTAT+GGG | + | chr1.1:79029686-79029705 | MS.gene76239:intron | 40.0% | |
| GTATACAGTCACAGAATGCA+TGG | - | chr1.1:79031338-79031357 | None:intergenic | 40.0% | |
| TAGTGCAGGAAATTCTACAC+GGG | - | chr1.1:79030941-79030960 | None:intergenic | 40.0% | |
| TATTTCTTCGCTTCTCCTCT+TGG | - | chr1.1:79032817-79032836 | None:intergenic | 40.0% | |
| TCGATCTCTTGTGACCTAAA+AGG | - | chr1.1:79031000-79031019 | None:intergenic | 40.0% | |
| TCTCTTGTGACCTAAAAGGT+TGG | - | chr1.1:79030996-79031015 | None:intergenic | 40.0% | |
| TGCGAAACTCAAAGTAGCTA+AGG | - | chr1.1:79029319-79029338 | None:intergenic | 40.0% | |
| TGGTGCAAGTATAGTTGCAA+AGG | + | chr1.1:79030904-79030923 | MS.gene76239:CDS | 40.0% | |
| TGTTGATGTCATTGACCCAA+AGG | + | chr1.1:79030344-79030363 | MS.gene76239:CDS | 40.0% | |
| TTACTTAAGTGGGGGGAAAT+TGG | - | chr1.1:79032100-79032119 | None:intergenic | 40.0% | |
| TTGATACAGTTGGAGATCCA+GGG | + | chr1.1:79030795-79030814 | MS.gene76239:CDS | 40.0% | |
| TTTGTTTGCCGTACTTTCCA+CGG | + | chr1.1:79031657-79031676 | MS.gene76239:intron | 40.0% | |
| ! | AAAATGGAAAGCTCTGGCAA+TGG | - | chr1.1:79029394-79029413 | None:intergenic | 40.0% |
| ! | ATCTGAAGTCATGTTAGAGC+TGG | - | chr1.1:79030624-79030643 | None:intergenic | 40.0% |
| ! | CAAACAGACCTTAGTCCTTT+TGG | + | chr1.1:79030397-79030416 | MS.gene76239:intron | 40.0% |
| ! | GTTGATAGGGTGCTCAAAAT+GGG | + | chr1.1:79030541-79030560 | MS.gene76239:CDS | 40.0% |
| ! | TCTGAAGTCATGTTAGAGCT+GGG | - | chr1.1:79030623-79030642 | None:intergenic | 40.0% |
| ! | TTAGCTACTTTGAGTTTCGC+AGG | + | chr1.1:79029318-79029337 | MS.gene76239:CDS | 40.0% |
| ! | TTTTGGCAGAGAGTTCCTTT+GGG | - | chr1.1:79030362-79030381 | None:intergenic | 40.0% |
| !! | AGATGGTGGAAACTAGGATT+AGG | + | chr1.1:79029858-79029877 | MS.gene76239:intron | 40.0% |
| !! | ATTTTGGCAGAGAGTTCCTT+TGG | - | chr1.1:79030363-79030382 | None:intergenic | 40.0% |
| !! | GTGCCTTTTGTTGTCAACAA+AGG | + | chr1.1:79032393-79032412 | MS.gene76239:intron | 40.0% |
| !! | TATGTAGCATTGACACAGAC+AGG | - | chr1.1:79030128-79030147 | None:intergenic | 40.0% |
| !!! | AAGGTTTTTTGGTAGGAGAG+AGG | - | chr1.1:79029300-79029319 | None:intergenic | 40.0% |
| !!! | AATGGGAGTGCTTTTAACTG+AGG | + | chr1.1:79030558-79030577 | MS.gene76239:CDS | 40.0% |
| !!! | GTTCTAGGTTTTTTCAGGCT+CGG | + | chr1.1:79032856-79032875 | MS.gene76239:CDS | 40.0% |
| AAATTCTACACGGGAGAGTG+AGG | - | chr1.1:79030932-79030951 | None:intergenic | 45.0% | |
| AACCATAGACCATAGGACCA+AGG | - | chr1.1:79029266-79029285 | None:intergenic | 45.0% | |
| ACCATCAAATTCAAGCTGGG+AGG | + | chr1.1:79029589-79029608 | MS.gene76239:intron | 45.0% | |
| ACCTCCCAGCTTGAATTTGA+TGG | - | chr1.1:79029593-79029612 | None:intergenic | 45.0% | |
| AGCTTCGCTTCATATTTCCC+TGG | - | chr1.1:79030815-79030834 | None:intergenic | 45.0% | |
| AGTCATGTTAGAGCTGGGAA+AGG | - | chr1.1:79030618-79030637 | None:intergenic | 45.0% | |
| ATACTTGCACCACTGACAAC+AGG | - | chr1.1:79030896-79030915 | None:intergenic | 45.0% | |
| CAAACACACCGTGGAAAGTA+CGG | - | chr1.1:79031668-79031687 | None:intergenic | 45.0% | |
| CGGAGACCAACAATGTTGTA+TGG | + | chr1.1:79029685-79029704 | MS.gene76239:intron | 45.0% | |
| GATATCACATGACTCTGCCA+TGG | + | chr1.1:79030513-79030532 | MS.gene76239:CDS | 45.0% | |
| GTGATCTTCTAGCCAAGACT+TGG | - | chr1.1:79031204-79031223 | None:intergenic | 45.0% | |
| TAGATCCTGCAACCAAGTCT+TGG | + | chr1.1:79031189-79031208 | MS.gene76239:intron | 45.0% | |
| TATATTGTTTGTGGGGTGGG+GGG | - | chr1.1:79032561-79032580 | None:intergenic | 45.0% | |
| TGGTGGAAACTAGGATTAGG+TGG | + | chr1.1:79029861-79029880 | MS.gene76239:intron | 45.0% | |
| TGTGTTTGAACTAGGCTGGT+AGG | + | chr1.1:79031680-79031699 | MS.gene76239:intron | 45.0% | |
| TGTTCCAAGTGTTACGTGCT+AGG | + | chr1.1:79032662-79032681 | MS.gene76239:intron | 45.0% | |
| TTCAAGCTGGGAGGTTGAAA+TGG | + | chr1.1:79029598-79029617 | MS.gene76239:intron | 45.0% | |
| TTCCACGGTGTGTTTGAACT+AGG | + | chr1.1:79031672-79031691 | MS.gene76239:intron | 45.0% | |
| ! | AAGGTGGCACTGAAGTCTTA+TGG | + | chr1.1:79031291-79031310 | MS.gene76239:CDS | 45.0% |
| ! | ATAATGGGAATCGACGAAGC+GGG | + | chr1.1:79029228-79029247 | MS.gene76239:CDS | 45.0% |
| ! | ATCTGAAGCTGCTATGGTTC+CGG | + | chr1.1:79029185-79029204 | MS.gene76239:CDS | 45.0% |
| ! | ATTCACAGGAACTTTGGCTC+TGG | + | chr1.1:79031059-79031078 | MS.gene76239:CDS | 45.0% |
| ! | CATAATGGGAATCGACGAAG+CGG | + | chr1.1:79029227-79029246 | MS.gene76239:CDS | 45.0% |
| ! | CGTTGATAGGGTGCTCAAAA+TGG | + | chr1.1:79030540-79030559 | MS.gene76239:CDS | 45.0% |
| ! | GTTTCTGTGGTGCTAAGATC+AGG | - | chr1.1:79032275-79032294 | None:intergenic | 45.0% |
| ! | TTTTGAGCACCCTATCAACG+AGG | - | chr1.1:79030540-79030559 | None:intergenic | 45.0% |
| !! | AACTTTGGCTCTGGATATCC+CGG | + | chr1.1:79031068-79031087 | MS.gene76239:CDS | 45.0% |
| !! | GAGTCTGACTTGGATGAAGA+TGG | + | chr1.1:79032729-79032748 | MS.gene76239:CDS | 45.0% |
| !! | TCTGACTTGGATGAAGATGG+TGG | + | chr1.1:79032732-79032751 | MS.gene76239:CDS | 45.0% |
| !! | TGCGTGTTTGGTGTCTGAAA+CGG | + | chr1.1:79029468-79029487 | MS.gene76239:intron | 45.0% |
| !!! | AGGGCGTTCTAGGTTTTTTC+AGG | + | chr1.1:79032851-79032870 | MS.gene76239:CDS | 45.0% |
| !! | AAATTAAATAAAAGAATAAA+TGG | - | chr1.1:79031839-79031858 | None:intergenic | 5.0% |
| AACGCCTAGCACGTAACACT+TGG | - | chr1.1:79032669-79032688 | None:intergenic | 50.0% | |
| AAGCTGCTATGGTTCCGGAA+TGG | + | chr1.1:79029190-79029209 | MS.gene76239:CDS | 50.0% | |
| AAGCTGGGAGGTTGAAATGG+TGG | + | chr1.1:79029601-79029620 | MS.gene76239:intron | 50.0% | |
| ACGGTGTGTTTGAACTAGGC+TGG | + | chr1.1:79031676-79031695 | MS.gene76239:intron | 50.0% | |
| ACTAGAGGCAGAGGAGGATT+AGG | + | chr1.1:79029955-79029974 | MS.gene76239:intron | 50.0% | |
| AGCCTAGTTCAAACACACCG+TGG | - | chr1.1:79031677-79031696 | None:intergenic | 50.0% | |
| AGCTGCTATGGTTCCGGAAT+GGG | + | chr1.1:79029191-79029210 | MS.gene76239:CDS | 50.0% | |
| AGTCAGATCACTAGAGGCAG+AGG | + | chr1.1:79029946-79029965 | MS.gene76239:intron | 50.0% | |
| AGTCATGACCTACTCACCTC+CGG | - | chr1.1:79031090-79031109 | None:intergenic | 50.0% | |
| GCATCGGAGGCTTGCATAAT+GGG | + | chr1.1:79029213-79029232 | MS.gene76239:CDS | 50.0% | |
| GGAAAAACGCAGAGCCTCTT+TGG | - | chr1.1:79031599-79031618 | None:intergenic | 50.0% | |
| GTCCTTGGTCCTATGGTCTA+TGG | + | chr1.1:79029261-79029280 | MS.gene76239:CDS | 50.0% | |
| TAGACCATAGGACCAAGGAC+AGG | - | chr1.1:79029261-79029280 | None:intergenic | 50.0% | |
| TATGGTTCCGGAATGGGCAT+CGG | + | chr1.1:79029197-79029216 | MS.gene76239:CDS | 50.0% | |
| TGGGTTTCACCACATCCAAG+AGG | + | chr1.1:79032799-79032818 | MS.gene76239:CDS | 50.0% | |
| TTCGCTTCTCCTCTTGGATG+TGG | - | chr1.1:79032811-79032830 | None:intergenic | 50.0% | |
| ! | TCTAGCCAAGACTTGGTTGC+AGG | - | chr1.1:79031197-79031216 | None:intergenic | 50.0% |
| !! | CAAGTGGTAAAGGGCGTTCT+AGG | + | chr1.1:79032841-79032860 | MS.gene76239:CDS | 50.0% |
| AGGTCCTGTCCTTGGTCCTA+TGG | + | chr1.1:79029254-79029273 | MS.gene76239:CDS | 55.0% | |
| CAGATCACTAGAGGCAGAGG+AGG | + | chr1.1:79029949-79029968 | MS.gene76239:intron | 55.0% | |
| GTCATGACCTACTCACCTCC+GGG | - | chr1.1:79031089-79031108 | None:intergenic | 55.0% | |
| TGCCATGGGCCTCGTTGATA+GGG | + | chr1.1:79030528-79030547 | MS.gene76239:CDS | 55.0% | |
| TGGATATCCCGGAGGTGAGT+AGG | + | chr1.1:79031079-79031098 | MS.gene76239:intron | 55.0% | |
| ! | GGCATCGGAGGCTTGCATAA+TGG | + | chr1.1:79029212-79029231 | MS.gene76239:CDS | 55.0% |
| !! | TTTGGCTCTGGATATCCCGG+AGG | + | chr1.1:79031071-79031090 | MS.gene76239:CDS | 55.0% |
| CAAGCCTCCGATGCCCATTC+CGG | - | chr1.1:79029207-79029226 | None:intergenic | 60.0% | |
| CACCCTATCAACGAGGCCCA+TGG | - | chr1.1:79030533-79030552 | None:intergenic | 60.0% | |
| CTGCCATGGGCCTCGTTGAT+AGG | + | chr1.1:79030527-79030546 | MS.gene76239:CDS | 60.0% | |
| GGAATCGACGAAGCGGGAAG+AGG | + | chr1.1:79029234-79029253 | MS.gene76239:CDS | 60.0% | |
| GCGGGAAGAGGTCCTGTCCT+TGG | + | chr1.1:79029246-79029265 | MS.gene76239:CDS | 65.0% | |
| !! | GGTTCCGGAATGGGCATCGG+AGG | + | chr1.1:79029200-79029219 | MS.gene76239:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 79029180 | 79032905 | 79029180 | ID=MS.gene76239 |
| chr1.1 | mRNA | 79029180 | 79032905 | 79029180 | ID=MS.gene76239.t1;Parent=MS.gene76239 |
| chr1.1 | exon | 79029180 | 79029339 | 79029180 | ID=MS.gene76239.t1.exon1;Parent=MS.gene76239.t1 |
| chr1.1 | CDS | 79029180 | 79029339 | 79029180 | ID=cds.MS.gene76239.t1;Parent=MS.gene76239.t1 |
| chr1.1 | exon | 79030268 | 79030391 | 79030268 | ID=MS.gene76239.t1.exon2;Parent=MS.gene76239.t1 |
| chr1.1 | CDS | 79030268 | 79030391 | 79030268 | ID=cds.MS.gene76239.t1;Parent=MS.gene76239.t1 |
| chr1.1 | exon | 79030492 | 79030579 | 79030492 | ID=MS.gene76239.t1.exon3;Parent=MS.gene76239.t1 |
| chr1.1 | CDS | 79030492 | 79030579 | 79030492 | ID=cds.MS.gene76239.t1;Parent=MS.gene76239.t1 |
| chr1.1 | exon | 79030788 | 79030925 | 79030788 | ID=MS.gene76239.t1.exon4;Parent=MS.gene76239.t1 |
| chr1.1 | CDS | 79030788 | 79030925 | 79030788 | ID=cds.MS.gene76239.t1;Parent=MS.gene76239.t1 |
| chr1.1 | exon | 79031005 | 79031092 | 79031005 | ID=MS.gene76239.t1.exon5;Parent=MS.gene76239.t1 |
| chr1.1 | CDS | 79031005 | 79031092 | 79031005 | ID=cds.MS.gene76239.t1;Parent=MS.gene76239.t1 |
| chr1.1 | exon | 79031192 | 79031312 | 79031192 | ID=MS.gene76239.t1.exon6;Parent=MS.gene76239.t1 |
| chr1.1 | CDS | 79031192 | 79031312 | 79031192 | ID=cds.MS.gene76239.t1;Parent=MS.gene76239.t1 |
| chr1.1 | exon | 79032728 | 79032905 | 79032728 | ID=MS.gene76239.t1.exon7;Parent=MS.gene76239.t1 |
| chr1.1 | CDS | 79032728 | 79032905 | 79032728 | ID=cds.MS.gene76239.t1;Parent=MS.gene76239.t1 |
| Gene Sequence |
| Protein sequence |
