Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000365.t1 | XP_013467242.1 | 95.7 | 883 | 37 | 1 | 98 | 980 | 104 | 985 | 0.00E+00 | 1561.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000365.t1 | Q6NU40 | 28.8 | 903 | 480 | 21 | 140 | 979 | 198 | 1000 | 6.2e-84 | 313.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000365.t1 | A0A072VI46 | 95.7 | 883 | 37 | 1 | 98 | 980 | 104 | 985 | 0.0e+00 | 1561.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000365.t1 | MTR_1g047790 | 96.029 | 957 | 37 | 1 | 24 | 980 | 30 | 985 | 0.0 | 1831 |
| MS.gene000365.t1 | MTR_4g050180 | 23.503 | 451 | 268 | 11 | 347 | 768 | 455 | 857 | 2.04e-14 | 78.6 |
| MS.gene000365.t1 | MTR_4g050180 | 23.503 | 451 | 268 | 11 | 347 | 768 | 426 | 828 | 2.44e-14 | 78.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000365.t1 | AT1G04730 | 55.940 | 926 | 344 | 15 | 66 | 979 | 69 | 942 | 0.0 | 959 |
| MS.gene000365.t1 | AT1G04730 | 58.862 | 773 | 262 | 11 | 212 | 979 | 1 | 722 | 0.0 | 875 |
| MS.gene000365.t1 | AT1G04730 | 58.862 | 773 | 262 | 11 | 212 | 979 | 1 | 722 | 0.0 | 875 |
| MS.gene000365.t1 | AT1G04730 | 58.862 | 773 | 262 | 11 | 212 | 979 | 1 | 722 | 0.0 | 875 |
| MS.gene000365.t1 | AT5G22010 | 31.944 | 216 | 103 | 5 | 344 | 544 | 390 | 576 | 3.63e-14 | 77.8 |
| MS.gene000365.t1 | AT5G22010 | 31.944 | 216 | 103 | 5 | 344 | 544 | 390 | 576 | 5.53e-14 | 77.0 |
Find 203 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGGTAGCTTTATAAACTTTA+AGG | 0.108911 | 1.1:+31182991 | MS.gene000365:CDS |
| AAGCTAGAGGTCTCGGTTTA+TGG | 0.138883 | 1.1:-31164410 | None:intergenic |
| TCATGGACCGTTAGTGTTTC+AGG | 0.171737 | 1.1:-31164074 | None:intergenic |
| GTAGAGATCTGTCATCATTT+TGG | 0.180648 | 1.1:-31184742 | None:intergenic |
| CTTTCTAACAAAACACTAAT+AGG | 0.222514 | 1.1:-31163814 | None:intergenic |
| ACTTCATACTTCAGGGTATT+AGG | 0.243838 | 1.1:-31182932 | None:intergenic |
| TTGAAAAGAGAGAGAAAGTT+AGG | 0.252411 | 1.1:+31162930 | MS.gene000365:CDS |
| CTTTCTTCTTAGAGAGAAAT+TGG | 0.253179 | 1.1:-31178908 | None:intergenic |
| TTTACCTATGAAGCAGGTTT+TGG | 0.269384 | 1.1:+31183128 | MS.gene000365:CDS |
| TCACCTGTCGAAGAAATTTA+AGG | 0.271243 | 1.1:-31183924 | None:intergenic |
| ACTGGTGCTCAGTTTGATAT+TGG | 0.281263 | 1.1:+31180693 | MS.gene000365:intron |
| GATTTCCTTGCTAAAACATT+AGG | 0.287862 | 1.1:-31183788 | None:intergenic |
| CGGTGGTGGTTGTTCTGGTT+CGG | 0.289350 | 1.1:-31162831 | None:intergenic |
| ATCGGAATCTGAATTCAAAT+TGG | 0.302705 | 1.1:-31162891 | None:intergenic |
| CATGAATTCCATCCAGAATC+AGG | 0.306086 | 1.1:-31181066 | None:intergenic |
| CATCTGCTACTTCATACTTC+AGG | 0.308025 | 1.1:-31182940 | None:intergenic |
| TGGTTTACCGGTATGATATA+AGG | 0.308456 | 1.1:-31180954 | None:intergenic |
| TCGAGTAATTCGAGTTCTTC+GGG | 0.309357 | 1.1:-31162728 | None:intergenic |
| CAATGGGATTCTACTGTGTT+TGG | 0.310955 | 1.1:+31164324 | MS.gene000365:CDS |
| GACTTTGGCCACTCGATGTT+TGG | 0.326000 | 1.1:-31181452 | None:intergenic |
| TGGTGATAGTGACCTGATTC+TGG | 0.331266 | 1.1:+31181054 | MS.gene000365:CDS |
| TAAGTATATTACCGGTCTTA+TGG | 0.335176 | 1.1:-31181725 | None:intergenic |
| CGATGTCATGGATATGGATA+TGG | 0.345675 | 1.1:+31162694 | MS.gene000365:CDS |
| AGAGAGAGAAAGTTAGGGTT+AGG | 0.346481 | 1.1:+31162936 | MS.gene000365:CDS |
| GGTGGTGGTTGTTCTGGTTC+GGG | 0.346780 | 1.1:-31162830 | None:intergenic |
| GCTTCGGCCACCTCCGACTT+CGG | 0.349858 | 1.1:+31162994 | MS.gene000365:CDS |
| GTTGGCGGTGGTGGTTGTTC+TGG | 0.349989 | 1.1:-31162836 | None:intergenic |
| AGCTAGAGGTCTCGGTTTAT+GGG | 0.350467 | 1.1:-31164409 | None:intergenic |
| AACATTAGGTTGACTTTCAA+TGG | 0.351503 | 1.1:-31183774 | None:intergenic |
| AGACTTAATTTCTCCATTGT+TGG | 0.358311 | 1.1:+31181684 | MS.gene000365:CDS |
| TTTGAATTCAGATTCCGATT+TGG | 0.363594 | 1.1:+31162895 | MS.gene000365:CDS |
| AAACTTTGCTTCCCTGCATC+AGG | 0.364573 | 1.1:-31168418 | None:intergenic |
| TTCGGGTTCGAGTTCGTCTT+CGG | 0.369479 | 1.1:-31162813 | None:intergenic |
| TGATTTCGATGTCATGGATA+TGG | 0.372752 | 1.1:+31162688 | MS.gene000365:CDS |
| AATTGTAGAGGAGATTCTTC+TGG | 0.374605 | 1.1:+31163175 | MS.gene000365:CDS |
| GTTTAAGAAGTCAAGTGTTA+AGG | 0.375440 | 1.1:+31184715 | MS.gene000365:CDS |
| AAGTGCAGCTGCATGATTCT+TGG | 0.379554 | 1.1:-31183741 | None:intergenic |
| GAACAAAAGGAGGGCACACC+TGG | 0.382644 | 1.1:+31164496 | MS.gene000365:CDS |
| TGATGCAGGGAAGCAAAGTT+TGG | 0.385461 | 1.1:+31168420 | MS.gene000365:CDS |
| TTACTGCACCGAATGGTGAT+AGG | 0.393177 | 1.1:+31163101 | MS.gene000365:CDS |
| TTCGAGTAATTCGAGTTCTT+CGG | 0.396296 | 1.1:-31162729 | None:intergenic |
| TGATTCTTGGTATTCGCAAA+TGG | 0.399723 | 1.1:-31183728 | None:intergenic |
| CAAGTTTGGTGAAATTGTCT+TGG | 0.403380 | 1.1:-31183822 | None:intergenic |
| TCGGGTTCGAGTTCGTCTTC+GGG | 0.406020 | 1.1:-31162812 | None:intergenic |
| TTTATAAAGCTACCGATAGA+AGG | 0.414296 | 1.1:-31182983 | None:intergenic |
| TGCACCAAAACCTGCTTCAT+AGG | 0.417809 | 1.1:-31183132 | None:intergenic |
| TTTAAGAAGTCAAGTGTTAA+GGG | 0.418513 | 1.1:+31184716 | MS.gene000365:CDS |
| TCACCATTCGGTGCAGTAAC+CGG | 0.421890 | 1.1:-31163097 | None:intergenic |
| GTTCCTTAAATTTCTTCGAC+AGG | 0.426510 | 1.1:+31183921 | MS.gene000365:CDS |
| GGGAAGCAAAGTTTGGATAA+AGG | 0.427568 | 1.1:+31168427 | MS.gene000365:CDS |
| CCTGGAGTAGTAATAGTAAC+AGG | 0.427634 | 1.1:+31164514 | MS.gene000365:CDS |
| CGATTTGCGTCGGAGATTGA+TGG | 0.427799 | 1.1:+31163064 | MS.gene000365:CDS |
| AAATTTAAGGAACTCCTAGA+TGG | 0.428279 | 1.1:-31183911 | None:intergenic |
| TTTAAGAGTACAGATGAGAG+TGG | 0.433939 | 1.1:+31164546 | MS.gene000365:CDS |
| AGAAATTCGCGCATTCGAAC+AGG | 0.440184 | 1.1:-31185422 | None:intergenic |
| TTGTCTCTTGTTCCTTCTAT+CGG | 0.440495 | 1.1:+31182971 | MS.gene000365:CDS |
| CATTGCACTCAGTGCTTTAG+CGG | 0.442706 | 1.1:+31178536 | MS.gene000365:CDS |
| GATGAGAGTGGGAGCTCAAA+TGG | 0.443695 | 1.1:+31164558 | MS.gene000365:CDS |
| ACTCTTGTGGTTAAAACAAT+GGG | 0.444335 | 1.1:+31164308 | MS.gene000365:CDS |
| ATCTGCTACTTCATACTTCA+GGG | 0.444478 | 1.1:-31182939 | None:intergenic |
| CACTTGGCGTAATGATCTTA+AGG | 0.447217 | 1.1:-31168648 | None:intergenic |
| GAAAGTTAGGGTTAGGGTAG+CGG | 0.448403 | 1.1:+31162943 | MS.gene000365:CDS |
| ATCTGAATTCAAATTGGAAC+GGG | 0.449378 | 1.1:-31162885 | None:intergenic |
| GCGAAATCTGTTGGCGGTGG+TGG | 0.449678 | 1.1:-31162845 | None:intergenic |
| AGTGCTTTAGCGGATTATAC+AGG | 0.455389 | 1.1:+31178546 | MS.gene000365:CDS |
| GCTGAAAAGAAGCCTGATGC+AGG | 0.458981 | 1.1:+31168406 | MS.gene000365:CDS |
| ATTACAATTACTGTCGGATA+AGG | 0.460067 | 1.1:+31182829 | MS.gene000365:CDS |
| TAAAACTCACAGGTCTTGAC+AGG | 0.461992 | 1.1:-31168495 | None:intergenic |
| GATTCTTGGTATTCGCAAAT+GGG | 0.462184 | 1.1:-31183727 | None:intergenic |
| CAATTATCATGATCCAGTTA+TGG | 0.463721 | 1.1:+31181105 | MS.gene000365:CDS |
| CAGTTAGTCGGGTGGTAAGC+AGG | 0.464227 | 1.1:+31176791 | MS.gene000365:CDS |
| GGTTTACCGGTATGATATAA+GGG | 0.466141 | 1.1:-31180953 | None:intergenic |
| TGATTCAAAGCCAAAGTGTC+TGG | 0.469721 | 1.1:+31167549 | MS.gene000365:CDS |
| AAATTTGAAGCTAGAGGTCT+CGG | 0.471517 | 1.1:-31164417 | None:intergenic |
| AGCCAATCCTCTTCTTCTGC+AGG | 0.471765 | 1.1:-31162974 | None:intergenic |
| ACGAAGCTGGATAGGTATTA+CGG | 0.473484 | 1.1:+31163130 | MS.gene000365:CDS |
| GGAAAGGAAATCATCAAAGA+AGG | 0.474855 | 1.1:+31168456 | MS.gene000365:CDS |
| TACCTTCTGTTCTGGTGCAC+CGG | 0.476036 | 1.1:-31164616 | None:intergenic |
| AAGTTTGGATAAAGGACAAA+TGG | 0.476134 | 1.1:+31168435 | MS.gene000365:CDS |
| CAGTCTTGAAGTTTATGATC+TGG | 0.476462 | 1.1:+31181238 | MS.gene000365:CDS |
| TGTTCAACCAACAGTTAGTC+GGG | 0.477153 | 1.1:+31176780 | MS.gene000365:CDS |
| AACATCAGAACAATCCAAAT+CGG | 0.477494 | 1.1:-31162909 | None:intergenic |
| TCGCGATAACGTCTTATCCT+TGG | 0.485922 | 1.1:-31163044 | None:intergenic |
| AAGTTTGGTGAAATTGTCTT+GGG | 0.486340 | 1.1:-31183821 | None:intergenic |
| GAGAGAGAAAGTTAGGGTTA+GGG | 0.486429 | 1.1:+31162937 | MS.gene000365:CDS |
| TTGAAATCTTACCGCATTGA+GGG | 0.487130 | 1.1:-31178934 | None:intergenic |
| GGGCATGACGTTATTGAGGC+TGG | 0.495747 | 1.1:+31183689 | MS.gene000365:CDS |
| CAGGAACATCGACAACACTT+TGG | 0.495799 | 1.1:-31164055 | None:intergenic |
| TACTCTTGTGGTTAAAACAA+TGG | 0.496335 | 1.1:+31164307 | MS.gene000365:CDS |
| GATATTGGTTCGCAAGTTGT+TGG | 0.497004 | 1.1:+31180708 | MS.gene000365:CDS |
| GCTTTCAGAACTAGCTTCCA+AGG | 0.500607 | 1.1:-31164033 | None:intergenic |
| AATTCGAGTTCTTCGGGGAG+AGG | 0.501144 | 1.1:-31162722 | None:intergenic |
| GAACAAAAGGAGGGCACAGT+TGG | 0.504795 | 1.1:+31164445 | MS.gene000365:CDS |
| GTATACCTGTGATATGACTT+TGG | 0.506724 | 1.1:-31181467 | None:intergenic |
| AAAGTAGTGGTCATCATCAT+CGG | 0.508984 | 1.1:-31162780 | None:intergenic |
| TGAAAAGAGAGAGAAAGTTA+GGG | 0.509596 | 1.1:+31162931 | MS.gene000365:CDS |
| GACGTTATCGCGATTTGCGT+CGG | 0.512410 | 1.1:+31163054 | MS.gene000365:CDS |
| AGCACTGAGTGCAATGGCAT+TGG | 0.515089 | 1.1:-31178529 | None:intergenic |
| CTCCTGCAGAAGAAGAGGAT+TGG | 0.516624 | 1.1:+31162972 | MS.gene000365:CDS |
| AATGGATGATTTCGATGTCA+TGG | 0.519594 | 1.1:+31162682 | None:intergenic |
| AACAACGATGATGGAAAAGA+TGG | 0.521725 | 1.1:+31181588 | MS.gene000365:CDS |
| TTGTTGTTCGTAAGTGCGAT+AGG | 0.521744 | 1.1:-31162756 | None:intergenic |
| AAAACTGCGACTTTAACAAA+AGG | 0.522898 | 1.1:+31183665 | MS.gene000365:CDS |
| TAGGTAAAGAAAGTACGTAA+TGG | 0.523920 | 1.1:-31183113 | None:intergenic |
| CAGAAGAAGAGGATTGGCTT+CGG | 0.525407 | 1.1:+31162978 | MS.gene000365:CDS |
| TAGGTATCGAACAACGATGA+TGG | 0.526147 | 1.1:+31181579 | MS.gene000365:intron |
| TACTGCACCGAATGGTGATA+GGG | 0.528385 | 1.1:+31163102 | MS.gene000365:CDS |
| ACTTTCTTTACCTATGAAGC+AGG | 0.529453 | 1.1:+31183122 | MS.gene000365:CDS |
| AAGTAGTGGTCATCATCATC+GGG | 0.530659 | 1.1:-31162779 | None:intergenic |
| ATAGGAAATACCAGACACTT+TGG | 0.531590 | 1.1:-31167559 | None:intergenic |
| ACACAACAAATGCCTCTCCT+TGG | 0.533973 | 1.1:+31181281 | MS.gene000365:CDS |
| GAAAGGAAATCATCAAAGAA+GGG | 0.537066 | 1.1:+31168457 | MS.gene000365:CDS |
| TGATAGGGTTTATACGAAGC+TGG | 0.538089 | 1.1:+31163117 | MS.gene000365:CDS |
| TGGTAACTTACTTGGCCACT+TGG | 0.539907 | 1.1:-31168664 | None:intergenic |
| CCTGTTACTATTACTACTCC+AGG | 0.540186 | 1.1:-31164514 | None:intergenic |
| AAGTCTTCAACAAAGGAAGT+AGG | 0.542169 | 1.1:-31181667 | None:intergenic |
| AATATATATGTAACAAGGAG+GGG | 0.542801 | 1.1:+31178499 | MS.gene000365:CDS |
| TGATGGAAAGGGTGCTGTGG+AGG | 0.543413 | 1.1:+31167686 | MS.gene000365:CDS |
| TGTTCTCGACATCTGGAAAG+AGG | 0.544296 | 1.1:+31180752 | MS.gene000365:CDS |
| TAGGTGGTGGATGAAATTGA+TGG | 0.544828 | 1.1:+31167654 | MS.gene000365:intron |
| ATCCCCACCATCCATAAGAC+CGG | 0.546602 | 1.1:+31181714 | MS.gene000365:CDS |
| GGGTTTATACGAAGCTGGAT+AGG | 0.547407 | 1.1:+31163122 | MS.gene000365:CDS |
| TTCGCAAGTTGTTGGCCAGA+AGG | 0.548250 | 1.1:+31180716 | MS.gene000365:CDS |
| AATGCAAAGTCACGGAATAC+CGG | 0.549958 | 1.1:+31164597 | MS.gene000365:CDS |
| GTATAAACCCTATCACCATT+CGG | 0.550752 | 1.1:-31163109 | None:intergenic |
| CTAGGAAAATTTGAAGCTAG+AGG | 0.551637 | 1.1:-31164423 | None:intergenic |
| ATGATGTACAATAATTGCTA+TGG | 0.553694 | 1.1:-31181408 | None:intergenic |
| ATTGAAATCTTACCGCATTG+AGG | 0.554309 | 1.1:-31178935 | None:intergenic |
| TTGTTCAACCAACAGTTAGT+CGG | 0.555383 | 1.1:+31176779 | MS.gene000365:CDS |
| GTCTATGACAGGTACTCTTG+TGG | 0.556382 | 1.1:+31164295 | MS.gene000365:intron |
| TACCGGTCTTATGGATGGTG+GGG | 0.557624 | 1.1:-31181716 | None:intergenic |
| ATTGATGGAGCCCTTGGTGA+TGG | 0.558634 | 1.1:+31167669 | MS.gene000365:CDS |
| AGAAATTAAGTCTTCAACAA+AGG | 0.560850 | 1.1:-31181674 | None:intergenic |
| TTACCGGTCTTATGGATGGT+GGG | 0.560914 | 1.1:-31181717 | None:intergenic |
| AAATATATATGTAACAAGGA+GGG | 0.561991 | 1.1:+31178498 | MS.gene000365:CDS |
| GATTGATGGTGAAGTTATGC+CGG | 0.565913 | 1.1:+31163078 | MS.gene000365:CDS |
| TGGTGATGGAAAGGGTGCTG+TGG | 0.566395 | 1.1:+31167683 | MS.gene000365:CDS |
| TGTACTCCCTTATATCATAC+CGG | 0.566517 | 1.1:+31180947 | MS.gene000365:CDS |
| CGCTAAAGCACTGAGTGCAA+TGG | 0.568087 | 1.1:-31178535 | None:intergenic |
| TTGTGGATATCATGTGGTTG+AGG | 0.568428 | 1.1:+31165700 | MS.gene000365:CDS |
| TCAACTGTAACTTCCGAAGT+CGG | 0.568857 | 1.1:-31163007 | None:intergenic |
| TGGCGTAATGATCTTAAGGC+AGG | 0.570004 | 1.1:-31168644 | None:intergenic |
| TGACAGATCCTTCTGCTATG+TGG | 0.570271 | 1.1:+31165629 | MS.gene000365:intron |
| ATCTTAAGGCAGGTGCATAT+AGG | 0.572649 | 1.1:-31168634 | None:intergenic |
| TGATGTAGAACGATCATCAC+TGG | 0.573132 | 1.1:-31167476 | None:intergenic |
| GATGAAATTGATGGAGCCCT+TGG | 0.575535 | 1.1:+31167663 | MS.gene000365:CDS |
| AGGAGGGCATGACGTTATTG+AGG | 0.578081 | 1.1:+31183685 | MS.gene000365:CDS |
| AGATGCTCCTGCAGAAGAAG+AGG | 0.578687 | 1.1:+31162967 | MS.gene000365:CDS |
| CTTACCACCCGACTAACTGT+TGG | 0.578892 | 1.1:-31176787 | None:intergenic |
| TACCGGTGCACCAGAACAGA+AGG | 0.583983 | 1.1:+31164614 | MS.gene000365:CDS |
| GAGAAGATCAGTAAAAGACT+TGG | 0.584087 | 1.1:-31164123 | None:intergenic |
| AGATCAAGAGAATTTCGCTA+AGG | 0.584578 | 1.1:+31163840 | MS.gene000365:CDS |
| GTAACTTCCGAAGTCGGAGG+TGG | 0.588749 | 1.1:-31163001 | None:intergenic |
| TGTACAATAATTGCTATGGT+AGG | 0.589957 | 1.1:-31181404 | None:intergenic |
| TTAAGAGTACAGATGAGAGT+GGG | 0.592177 | 1.1:+31164547 | MS.gene000365:CDS |
| AATCTGAATTCAAATTGGAA+CGG | 0.592683 | 1.1:-31162886 | None:intergenic |
| GGTGGCATTACAATTACTGT+CGG | 0.593069 | 1.1:+31182823 | MS.gene000365:intron |
| TGGATAAAGGACAAATGGAA+AGG | 0.593258 | 1.1:+31168440 | MS.gene000365:CDS |
| GGAGCCCTTGGTGATGGAAA+GGG | 0.595218 | 1.1:+31167675 | MS.gene000365:CDS |
| TGACTGTTAGCGAAATCTGT+TGG | 0.596289 | 1.1:-31162854 | None:intergenic |
| TATATTACCGGTCTTATGGA+TGG | 0.596794 | 1.1:-31181721 | None:intergenic |
| CTTAAGATCATTACGCCAAG+TGG | 0.597064 | 1.1:+31168649 | MS.gene000365:CDS |
| ATATATATGTAACAAGGAGG+GGG | 0.598305 | 1.1:+31178500 | MS.gene000365:CDS |
| ATTACCGGTCTTATGGATGG+TGG | 0.598649 | 1.1:-31181718 | None:intergenic |
| CTGTTAGCGAAATCTGTTGG+CGG | 0.598908 | 1.1:-31162851 | None:intergenic |
| CTGAAAAGAAGCCTGATGCA+GGG | 0.603143 | 1.1:+31168407 | MS.gene000365:CDS |
| TGGAGCCCTTGGTGATGGAA+AGG | 0.603757 | 1.1:+31167674 | MS.gene000365:CDS |
| ACTGCGACTTTAACAAAAGG+AGG | 0.605355 | 1.1:+31183668 | MS.gene000365:CDS |
| AGAAGATCAGTAAAAGACTT+GGG | 0.607880 | 1.1:-31164122 | None:intergenic |
| AAATATCGCCACATATTGCA+AGG | 0.608936 | 1.1:+31181635 | MS.gene000365:CDS |
| CGGGAGGATTGTAAAAGTAG+TGG | 0.611377 | 1.1:-31162793 | None:intergenic |
| TTCAAAAGCCAAACATCGAG+TGG | 0.613266 | 1.1:+31181444 | MS.gene000365:CDS |
| AGTGGCCAAAGTCATATCAC+AGG | 0.614743 | 1.1:+31181462 | MS.gene000365:CDS |
| CACTTGCACATGTAGCTGCT+AGG | 0.615704 | 1.1:+31165675 | MS.gene000365:CDS |
| GTCACGAAGCTGAATTGTAG+AGG | 0.617778 | 1.1:+31163163 | MS.gene000365:CDS |
| GTATGATATAAGGGAGTACA+AGG | 0.619033 | 1.1:-31180944 | None:intergenic |
| CATGACAAAACTGCTAGACA+TGG | 0.621685 | 1.1:+31183874 | MS.gene000365:CDS |
| TTAGCGAAATCTGTTGGCGG+TGG | 0.621962 | 1.1:-31162848 | None:intergenic |
| GGGGATAAAATGTCCAACAA+TGG | 0.624497 | 1.1:-31181697 | None:intergenic |
| ATGCCGGTTACTGCACCGAA+TGG | 0.624781 | 1.1:+31163094 | MS.gene000365:CDS |
| AAAATATATATGTAACAAGG+AGG | 0.625229 | 1.1:+31178497 | MS.gene000365:CDS |
| CATGTAGCTGCTAGGCATTG+TGG | 0.628699 | 1.1:+31165683 | MS.gene000365:CDS |
| CGATGTTCCTGAAACACTAA+CGG | 0.633829 | 1.1:+31164067 | MS.gene000365:CDS |
| TGAAGAAGTGAGATTCTCCA+AGG | 0.636503 | 1.1:+31163027 | MS.gene000365:CDS |
| AGCACCCTTTCCATCACCAA+GGG | 0.639210 | 1.1:-31167679 | None:intergenic |
| GATAAGTGCCTTGCAATATG+TGG | 0.639941 | 1.1:-31181643 | None:intergenic |
| GATAGTGACCTGATTCTGGA+TGG | 0.642489 | 1.1:+31181058 | MS.gene000365:CDS |
| AAAGGAAATCATCAAAGAAG+GGG | 0.646484 | 1.1:+31168458 | MS.gene000365:CDS |
| GGTTCGAGTTCGTCTTCGGG+AGG | 0.648144 | 1.1:-31162809 | None:intergenic |
| TGCTCAATTAGTTAGCACAA+TGG | 0.651026 | 1.1:+31182865 | MS.gene000365:CDS |
| CGAGTAATTCGAGTTCTTCG+GGG | 0.654717 | 1.1:-31162727 | None:intergenic |
| CTGCGACTTTAACAAAAGGA+GGG | 0.663227 | 1.1:+31183669 | MS.gene000365:CDS |
| AGTATCATCCTACCAAGGAG+AGG | 0.672223 | 1.1:-31181293 | None:intergenic |
| ATACACGCAATGCAAAGTCA+CGG | 0.678553 | 1.1:+31164589 | MS.gene000365:CDS |
| ACTAAAATATATATGTAACA+AGG | 0.680306 | 1.1:+31178494 | MS.gene000365:CDS |
| CAGCACCCTTTCCATCACCA+AGG | 0.682192 | 1.1:-31167680 | None:intergenic |
| ACTGTAACTTCCGAAGTCGG+AGG | 0.688921 | 1.1:-31163004 | None:intergenic |
| TCAACCAACAGTTAGTCGGG+TGG | 0.692860 | 1.1:+31176783 | MS.gene000365:CDS |
| AAAACTCACAGGTCTTGACA+GGG | 0.694198 | 1.1:-31168494 | None:intergenic |
| TAGGCATTGTGGATATCATG+TGG | 0.703509 | 1.1:+31165694 | MS.gene000365:CDS |
| GAAGAAAGAAACCCTCAATG+CGG | 0.741008 | 1.1:+31178923 | MS.gene000365:CDS |
| AGTTCATCTGAACCACATCG+AGG | 0.753488 | 1.1:-31167516 | None:intergenic |
| TGATGAACAGACAAACCGCG+AGG | 0.794628 | 1.1:+31164148 | MS.gene000365:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 31162683 | 31185451 | 31162683 | ID=MS.gene000365 |
| chr1.1 | mRNA | 31162683 | 31185451 | 31162683 | ID=MS.gene000365.t1;Parent=MS.gene000365 |
| chr1.1 | exon | 31162683 | 31163196 | 31162683 | ID=MS.gene000365.t1.exon1;Parent=MS.gene000365.t1 |
| chr1.1 | CDS | 31162683 | 31163196 | 31162683 | ID=cds.MS.gene000365.t1;Parent=MS.gene000365.t1 |
| chr1.1 | exon | 31163800 | 31163861 | 31163800 | ID=MS.gene000365.t1.exon2;Parent=MS.gene000365.t1 |
| chr1.1 | CDS | 31163800 | 31163861 | 31163800 | ID=cds.MS.gene000365.t1;Parent=MS.gene000365.t1 |
| chr1.1 | exon | 31164032 | 31164169 | 31164032 | ID=MS.gene000365.t1.exon3;Parent=MS.gene000365.t1 |
| chr1.1 | CDS | 31164032 | 31164169 | 31164032 | ID=cds.MS.gene000365.t1;Parent=MS.gene000365.t1 |
| chr1.1 | exon | 31164306 | 31164635 | 31164306 | ID=MS.gene000365.t1.exon4;Parent=MS.gene000365.t1 |
| chr1.1 | CDS | 31164306 | 31164635 | 31164306 | ID=cds.MS.gene000365.t1;Parent=MS.gene000365.t1 |
| chr1.1 | exon | 31165635 | 31165721 | 31165635 | ID=MS.gene000365.t1.exon5;Parent=MS.gene000365.t1 |
| chr1.1 | CDS | 31165635 | 31165721 | 31165635 | ID=cds.MS.gene000365.t1;Parent=MS.gene000365.t1 |
| chr1.1 | exon | 31167469 | 31167570 | 31167469 | ID=MS.gene000365.t1.exon6;Parent=MS.gene000365.t1 |
| chr1.1 | CDS | 31167469 | 31167570 | 31167469 | ID=cds.MS.gene000365.t1;Parent=MS.gene000365.t1 |
| chr1.1 | exon | 31167657 | 31167722 | 31167657 | ID=MS.gene000365.t1.exon7;Parent=MS.gene000365.t1 |
| chr1.1 | CDS | 31167657 | 31167722 | 31167657 | ID=cds.MS.gene000365.t1;Parent=MS.gene000365.t1 |
| chr1.1 | exon | 31168400 | 31168507 | 31168400 | ID=MS.gene000365.t1.exon8;Parent=MS.gene000365.t1 |
| chr1.1 | CDS | 31168400 | 31168507 | 31168400 | ID=cds.MS.gene000365.t1;Parent=MS.gene000365.t1 |
| chr1.1 | exon | 31168614 | 31168675 | 31168614 | ID=MS.gene000365.t1.exon9;Parent=MS.gene000365.t1 |
| chr1.1 | CDS | 31168614 | 31168675 | 31168614 | ID=cds.MS.gene000365.t1;Parent=MS.gene000365.t1 |
| chr1.1 | exon | 31176768 | 31176812 | 31176768 | ID=MS.gene000365.t1.exon10;Parent=MS.gene000365.t1 |
| chr1.1 | CDS | 31176768 | 31176812 | 31176768 | ID=cds.MS.gene000365.t1;Parent=MS.gene000365.t1 |
| chr1.1 | exon | 31178494 | 31178567 | 31178494 | ID=MS.gene000365.t1.exon11;Parent=MS.gene000365.t1 |
| chr1.1 | CDS | 31178494 | 31178567 | 31178494 | ID=cds.MS.gene000365.t1;Parent=MS.gene000365.t1 |
| chr1.1 | exon | 31178877 | 31178944 | 31178877 | ID=MS.gene000365.t1.exon12;Parent=MS.gene000365.t1 |
| chr1.1 | CDS | 31178877 | 31178944 | 31178877 | ID=cds.MS.gene000365.t1;Parent=MS.gene000365.t1 |
| chr1.1 | exon | 31180705 | 31180773 | 31180705 | ID=MS.gene000365.t1.exon13;Parent=MS.gene000365.t1 |
| chr1.1 | CDS | 31180705 | 31180773 | 31180705 | ID=cds.MS.gene000365.t1;Parent=MS.gene000365.t1 |
| chr1.1 | exon | 31180874 | 31180968 | 31180874 | ID=MS.gene000365.t1.exon14;Parent=MS.gene000365.t1 |
| chr1.1 | CDS | 31180874 | 31180968 | 31180874 | ID=cds.MS.gene000365.t1;Parent=MS.gene000365.t1 |
| chr1.1 | exon | 31181054 | 31181135 | 31181054 | ID=MS.gene000365.t1.exon15;Parent=MS.gene000365.t1 |
| chr1.1 | CDS | 31181054 | 31181135 | 31181054 | ID=cds.MS.gene000365.t1;Parent=MS.gene000365.t1 |
| chr1.1 | exon | 31181224 | 31181302 | 31181224 | ID=MS.gene000365.t1.exon16;Parent=MS.gene000365.t1 |
| chr1.1 | CDS | 31181224 | 31181302 | 31181224 | ID=cds.MS.gene000365.t1;Parent=MS.gene000365.t1 |
| chr1.1 | exon | 31181396 | 31181483 | 31181396 | ID=MS.gene000365.t1.exon17;Parent=MS.gene000365.t1 |
| chr1.1 | CDS | 31181396 | 31181483 | 31181396 | ID=cds.MS.gene000365.t1;Parent=MS.gene000365.t1 |
| chr1.1 | exon | 31181582 | 31181735 | 31181582 | ID=MS.gene000365.t1.exon18;Parent=MS.gene000365.t1 |
| chr1.1 | CDS | 31181582 | 31181735 | 31181582 | ID=cds.MS.gene000365.t1;Parent=MS.gene000365.t1 |
| chr1.1 | exon | 31182824 | 31183012 | 31182824 | ID=MS.gene000365.t1.exon19;Parent=MS.gene000365.t1 |
| chr1.1 | CDS | 31182824 | 31183012 | 31182824 | ID=cds.MS.gene000365.t1;Parent=MS.gene000365.t1 |
| chr1.1 | exon | 31183099 | 31183158 | 31183099 | ID=MS.gene000365.t1.exon20;Parent=MS.gene000365.t1 |
| chr1.1 | CDS | 31183099 | 31183158 | 31183099 | ID=cds.MS.gene000365.t1;Parent=MS.gene000365.t1 |
| chr1.1 | exon | 31183632 | 31183942 | 31183632 | ID=MS.gene000365.t1.exon21;Parent=MS.gene000365.t1 |
| chr1.1 | CDS | 31183632 | 31183942 | 31183632 | ID=cds.MS.gene000365.t1;Parent=MS.gene000365.t1 |
| chr1.1 | exon | 31184715 | 31184820 | 31184715 | ID=MS.gene000365.t1.exon22;Parent=MS.gene000365.t1 |
| chr1.1 | CDS | 31184715 | 31184820 | 31184715 | ID=cds.MS.gene000365.t1;Parent=MS.gene000365.t1 |
| chr1.1 | exon | 31185398 | 31185451 | 31185398 | ID=MS.gene000365.t1.exon23;Parent=MS.gene000365.t1 |
| chr1.1 | CDS | 31185398 | 31185451 | 31185398 | ID=cds.MS.gene000365.t1;Parent=MS.gene000365.t1 |
| Gene Sequence |
| Protein sequence |
