Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77207.t1 | XP_003622990.1 | 98.8 | 246 | 3 | 0 | 1 | 246 | 1 | 246 | 3.20E-121 | 444.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77207.t1 | Q9SAI5 | 47.3 | 245 | 127 | 2 | 4 | 246 | 3 | 247 | 1.2e-55 | 218.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77207.t1 | G7L2C7 | 98.8 | 246 | 3 | 0 | 1 | 246 | 1 | 246 | 2.3e-121 | 444.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051791 | MS.gene77207 | 0.82618 | 3.13E-54 | -1.69E-46 |
| MS.gene053148 | MS.gene77207 | 0.800638 | 1.31E-48 | -1.69E-46 |
| MS.gene057684 | MS.gene77207 | -0.80754 | 4.81E-50 | -1.69E-46 |
| MS.gene060763 | MS.gene77207 | 0.802283 | 6.04E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene77207 | MS.gene034157 | PPI |
| MS.gene053148 | MS.gene77207 | PPI |
| MS.gene77207 | MS.gene26979 | PPI |
| MS.gene77207 | MS.gene55098 | PPI |
| MS.gene77207 | MS.gene56166 | PPI |
| MS.gene037074 | MS.gene77207 | PPI |
| MS.gene77207 | MS.gene24260 | PPI |
| MS.gene77207 | MS.gene054580 | PPI |
| MS.gene77207 | MS.gene034156 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77207.t1 | MTR_7g059170 | 98.780 | 246 | 3 | 0 | 1 | 246 | 1 | 246 | 0.0 | 497 |
| MS.gene77207.t1 | MTR_4g008160 | 47.234 | 235 | 123 | 1 | 13 | 246 | 9 | 243 | 1.46e-73 | 224 |
| MS.gene77207.t1 | MTR_1g022385 | 46.383 | 235 | 125 | 1 | 13 | 246 | 41 | 275 | 4.56e-72 | 221 |
| MS.gene77207.t1 | MTR_2g038250 | 45.344 | 247 | 131 | 2 | 1 | 246 | 1 | 244 | 1.98e-71 | 219 |
| MS.gene77207.t1 | MTR_3g029930 | 83.784 | 74 | 11 | 1 | 1 | 74 | 1 | 73 | 4.37e-34 | 117 |
| MS.gene77207.t1 | MTR_1g022375 | 48.684 | 76 | 39 | 0 | 161 | 236 | 81 | 156 | 7.63e-20 | 83.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77207.t1 | AT1G80750 | 51.210 | 248 | 118 | 3 | 1 | 246 | 1 | 247 | 1.50e-78 | 237 |
| MS.gene77207.t1 | AT2G01250 | 48.101 | 237 | 118 | 2 | 13 | 246 | 8 | 242 | 1.86e-73 | 224 |
| MS.gene77207.t1 | AT3G13580 | 46.383 | 235 | 125 | 1 | 13 | 246 | 10 | 244 | 2.41e-73 | 224 |
| MS.gene77207.t1 | AT3G13580 | 46.383 | 235 | 125 | 1 | 13 | 246 | 10 | 244 | 2.41e-73 | 224 |
| MS.gene77207.t1 | AT3G13580 | 46.383 | 235 | 125 | 1 | 13 | 246 | 10 | 244 | 2.41e-73 | 224 |
| MS.gene77207.t1 | AT3G13580 | 46.383 | 235 | 125 | 1 | 13 | 246 | 10 | 244 | 2.41e-73 | 224 |
| MS.gene77207.t1 | AT3G13580 | 46.383 | 235 | 125 | 1 | 13 | 246 | 10 | 244 | 2.41e-73 | 224 |
| MS.gene77207.t1 | AT3G13580 | 46.383 | 235 | 125 | 1 | 13 | 246 | 10 | 244 | 2.41e-73 | 224 |
| MS.gene77207.t1 | AT3G13580 | 46.383 | 235 | 125 | 1 | 13 | 246 | 10 | 244 | 2.41e-73 | 224 |
| MS.gene77207.t1 | AT3G13580 | 46.383 | 235 | 125 | 1 | 13 | 246 | 10 | 244 | 2.41e-73 | 224 |
| MS.gene77207.t1 | AT3G13580 | 46.383 | 235 | 125 | 1 | 13 | 246 | 10 | 244 | 2.41e-73 | 224 |
| MS.gene77207.t1 | AT2G44120 | 47.257 | 237 | 120 | 2 | 13 | 246 | 8 | 242 | 3.17e-73 | 223 |
| MS.gene77207.t1 | AT2G44120 | 47.257 | 237 | 120 | 2 | 13 | 246 | 13 | 247 | 3.26e-73 | 223 |
| MS.gene77207.t1 | AT2G01250 | 43.605 | 172 | 92 | 2 | 13 | 181 | 8 | 177 | 3.55e-38 | 132 |
Find 58 sgRNAs with CRISPR-Local
Find 111 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAACTGAACAAGTGCTTTC+TGG | 0.154170 | 7.2:+37596792 | None:intergenic |
| CTGAATACGAATGACTATTA+TGG | 0.199323 | 7.2:+37596928 | None:intergenic |
| CTTGTAAATCAGCTCCTTTA+TGG | 0.209662 | 7.2:+37596129 | None:intergenic |
| TACAAGGATGGTGGAGATTC+AGG | 0.234481 | 7.2:-37595805 | MS.gene77207:CDS |
| CATAATAGTCATTCGTATTC+AGG | 0.240399 | 7.2:-37596927 | MS.gene77207:CDS |
| CAGAAAGCACTTGTTCAGTT+TGG | 0.268658 | 7.2:-37596791 | MS.gene77207:CDS |
| AAGCCAGCAGATGGATTAAA+AGG | 0.288400 | 7.2:-37595841 | MS.gene77207:CDS |
| CCCTTCGTTTCATTCTAATA+AGG | 0.310268 | 7.2:+37596993 | None:intergenic |
| TTGTAGGAATTGGGAAAGTT+TGG | 0.312133 | 7.2:-37595958 | MS.gene77207:intron |
| GGAATATAGTTGAGATCCTT+TGG | 0.341292 | 7.2:+37597314 | None:intergenic |
| AGAAAGCACTTGTTCAGTTT+GGG | 0.353399 | 7.2:-37596790 | MS.gene77207:CDS |
| TGCTGGCTTGTTCAGTTCAA+AGG | 0.380601 | 7.2:+37595855 | None:intergenic |
| TGAATACGAATGACTATTAT+GGG | 0.384437 | 7.2:+37596929 | None:intergenic |
| CTCTTCTTCAATATAACCTC+AGG | 0.413339 | 7.2:+37597293 | None:intergenic |
| ACTATTATGGGCTTGTTGCT+TGG | 0.413991 | 7.2:+37596941 | None:intergenic |
| TGCAAATCTTAAAACCATAA+AGG | 0.425498 | 7.2:-37596143 | MS.gene77207:CDS |
| GTTCAAAGGGCCACATAAAT+CGG | 0.432282 | 7.2:+37595869 | None:intergenic |
| AGCATGGGCCTTGAGTAAAA+AGG | 0.451851 | 7.2:-37597258 | MS.gene77207:CDS |
| GTTGAACCATATGTCACCTA+TGG | 0.470090 | 7.2:-37596700 | MS.gene77207:CDS |
| CAATGTTGGTCCACACTTCA+AGG | 0.470139 | 7.2:-37595899 | MS.gene77207:CDS |
| GCTGGCTTGTTCAGTTCAAA+GGG | 0.484099 | 7.2:+37595856 | None:intergenic |
| ATAATAGTCATTCGTATTCA+GGG | 0.488242 | 7.2:-37596926 | MS.gene77207:CDS |
| GCTTACCCATAGGTGACATA+TGG | 0.491527 | 7.2:+37596694 | None:intergenic |
| ACGAAGGGTCAAGTGGAGAC+GGG | 0.493528 | 7.2:-37596978 | MS.gene77207:CDS |
| TTGGCCATCACTCCATCAGT+TGG | 0.498511 | 7.2:+37596733 | None:intergenic |
| AGAGGAAACACAGCGAAGCA+TGG | 0.507603 | 7.2:-37597274 | MS.gene77207:CDS |
| GTCTTTGTGAAGCCAACTGA+TGG | 0.508756 | 7.2:-37596745 | MS.gene77207:CDS |
| ACAAGGATGGTGGAGATTCA+GGG | 0.513757 | 7.2:-37595804 | MS.gene77207:CDS |
| AGACAATAATCTTATTGAGC+AGG | 0.517657 | 7.2:-37596065 | MS.gene77207:intron |
| CTGAGGTTATATTGAAGAAG+AGG | 0.519905 | 7.2:-37597292 | MS.gene77207:CDS |
| AGGAAGTTGTCCGATTTATG+TGG | 0.520802 | 7.2:-37595879 | MS.gene77207:CDS |
| AAAGGAGCTGATTTACAAGA+AGG | 0.528892 | 7.2:-37596125 | MS.gene77207:CDS |
| ACTTGAAAAGATGGCTGAAG+AGG | 0.529766 | 7.2:-37597342 | None:intergenic |
| AACGAAGGGTCAAGTGGAGA+CGG | 0.529927 | 7.2:-37596979 | MS.gene77207:CDS |
| AATCTCCACCATCCTTGTAT+CGG | 0.534716 | 7.2:+37595809 | None:intergenic |
| TGATGGAGTGATGGCCAAGC+TGG | 0.538270 | 7.2:-37596728 | MS.gene77207:CDS |
| AGTCCTTGGACTTCCTGAGC+TGG | 0.543154 | 7.2:+37597213 | None:intergenic |
| GAGGAAACACAGCGAAGCAT+GGG | 0.549509 | 7.2:-37597273 | MS.gene77207:CDS |
| ATAAGATTATTGTCTGTCAA+AGG | 0.552916 | 7.2:+37596073 | None:intergenic |
| GAACTGAACAAGCCAGCAGA+TGG | 0.558045 | 7.2:-37595850 | MS.gene77207:CDS |
| GTGCATCAAATTGACAATGT+TGG | 0.571611 | 7.2:-37595913 | MS.gene77207:CDS |
| CGAAGGGTCAAGTGGAGACG+GGG | 0.582255 | 7.2:-37596977 | MS.gene77207:CDS |
| TGGTTCAACTCTCGCCAGCT+TGG | 0.586026 | 7.2:+37596714 | None:intergenic |
| GGCTGAAGAGGAACAACCAA+AGG | 0.590481 | 7.2:-37597330 | MS.gene77207:CDS |
| TTGAACCATATGTCACCTAT+GGG | 0.596680 | 7.2:-37596699 | MS.gene77207:intron |
| AAGGAGCTGATTTACAAGAA+GGG | 0.608163 | 7.2:-37596124 | MS.gene77207:CDS |
| GAATGAAACGAAGGGTCAAG+TGG | 0.608473 | 7.2:-37596985 | MS.gene77207:CDS |
| CGGACAACTTCCTTGAAGTG+TGG | 0.624573 | 7.2:+37595889 | None:intergenic |
| ACCTTATTAGAATGAAACGA+AGG | 0.629621 | 7.2:-37596994 | MS.gene77207:CDS |
| TTTCCAGCTCAGGAAGTCCA+AGG | 0.632786 | 7.2:-37597216 | MS.gene77207:CDS |
| CAAGGATGGTGGAGATTCAG+GGG | 0.643297 | 7.2:-37595803 | MS.gene77207:CDS |
| CCTTATTAGAATGAAACGAA+GGG | 0.647440 | 7.2:-37596993 | MS.gene77207:CDS |
| GAAGCCAACTGATGGAGTGA+TGG | 0.656585 | 7.2:-37596737 | MS.gene77207:CDS |
| TAATAGTCATTCGTATTCAG+GGG | 0.663363 | 7.2:-37596925 | MS.gene77207:intron |
| GGATCTCAACTATATTCCTG+AGG | 0.677649 | 7.2:-37597309 | MS.gene77207:CDS |
| GCTCATTGATGAGATCCTCA+CGG | 0.701499 | 7.2:+37595779 | None:intergenic |
| GGAGACGGGGAGATAAATCG+AGG | 0.706828 | 7.2:-37596964 | MS.gene77207:CDS |
| TGGAGATTCAGGGGACCGTG+AGG | 0.708623 | 7.2:-37595794 | MS.gene77207:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATAACAAAATAAAAGGA+GGG | + | chr7.2:37595970-37595989 | None:intergenic | 15.0% |
| !! | AGTGAATATAACAAAATAAA+AGG | + | chr7.2:37595974-37595993 | None:intergenic | 15.0% |
| !! | TTTATGTTATGATATGTAAT+TGG | - | chr7.2:37596472-37596491 | MS.gene77207:intron | 15.0% |
| !! | ATATTCAAAAATGAAATCCT+CGG | + | chr7.2:37595916-37595935 | None:intergenic | 20.0% |
| !! | GAATATAACAAAATAAAAGG+AGG | + | chr7.2:37595971-37595990 | None:intergenic | 20.0% |
| !!! | AAACAGATTTTCACAAAATT+AGG | + | chr7.2:37596916-37596935 | None:intergenic | 20.0% |
| !!! | AACCAGTTTTTATAATAAAG+TGG | + | chr7.2:37596820-37596839 | None:intergenic | 20.0% |
| !!! | TTTTTGGTTTAGAATATTCA+TGG | - | chr7.2:37596557-37596576 | MS.gene77207:intron | 20.0% |
| ! | ATAAGATTATTGTCTGTCAA+AGG | + | chr7.2:37597021-37597040 | None:intergenic | 25.0% |
| ! | ATAATAGTCATTCGTATTCA+GGG | - | chr7.2:37596165-37596184 | MS.gene77207:intron | 25.0% |
| ! | CACCACTTTATTATAAAAAC+TGG | - | chr7.2:37596815-37596834 | MS.gene77207:CDS | 25.0% |
| ! | GACAAAAAATCAAAACATCA+AGG | + | chr7.2:37596210-37596229 | None:intergenic | 25.0% |
| ! | GTTATGATATGTAATTGGAA+GGG | - | chr7.2:37596477-37596496 | MS.gene77207:intron | 25.0% |
| ! | TAGAATATTCATGGAAGATT+GGG | - | chr7.2:37596566-37596585 | MS.gene77207:intron | 25.0% |
| ! | TATTCAAAAATGAAATCCTC+GGG | + | chr7.2:37595915-37595934 | None:intergenic | 25.0% |
| ! | TGAACTTCATAAATTGTTTG+TGG | - | chr7.2:37596509-37596528 | MS.gene77207:intron | 25.0% |
| ! | TGAATACGAATGACTATTAT+GGG | + | chr7.2:37596165-37596184 | None:intergenic | 25.0% |
| ! | TGCAAATCTTAAAACCATAA+AGG | - | chr7.2:37596948-37596967 | MS.gene77207:CDS | 25.0% |
| ! | TGTTATGATATGTAATTGGA+AGG | - | chr7.2:37596476-37596495 | MS.gene77207:intron | 25.0% |
| ! | TTAGAATATTCATGGAAGAT+TGG | - | chr7.2:37596565-37596584 | MS.gene77207:intron | 25.0% |
| !! | AGTCTACTATCTATACTTTT+TGG | - | chr7.2:37596541-37596560 | MS.gene77207:intron | 25.0% |
| !!! | CTTTTGCTCTATTTGTTTTT+AGG | - | chr7.2:37596254-37596273 | MS.gene77207:intron | 25.0% |
| ACAAAAACAATTCAGTGAGT+GGG | + | chr7.2:37597094-37597113 | None:intergenic | 30.0% | |
| ACCTTATTAGAATGAAACGA+AGG | - | chr7.2:37596097-37596116 | MS.gene77207:CDS | 30.0% | |
| AGACAATAATCTTATTGAGC+AGG | - | chr7.2:37597026-37597045 | MS.gene77207:intron | 30.0% | |
| ATGAATTCTATCACTTGTGT+AGG | - | chr7.2:37596068-37596087 | MS.gene77207:CDS | 30.0% | |
| CACTACTATTAGTACACATA+AGG | + | chr7.2:37596663-37596682 | None:intergenic | 30.0% | |
| CATAATAGTCATTCGTATTC+AGG | - | chr7.2:37596164-37596183 | MS.gene77207:intron | 30.0% | |
| CCTTATTAGAATGAAACGAA+GGG | - | chr7.2:37596098-37596117 | MS.gene77207:CDS | 30.0% | |
| CTCTACTATTAGTACACATA+AGG | + | chr7.2:37596729-37596748 | None:intergenic | 30.0% | |
| CTGAATACGAATGACTATTA+TGG | + | chr7.2:37596166-37596185 | None:intergenic | 30.0% | |
| TAATAGTCATTCGTATTCAG+GGG | - | chr7.2:37596166-37596185 | MS.gene77207:intron | 30.0% | |
| TACAAAAACAATTCAGTGAG+TGG | + | chr7.2:37597095-37597114 | None:intergenic | 30.0% | |
| TATGTAAAGTAGTGCACATA+TGG | - | chr7.2:37596785-37596804 | MS.gene77207:CDS | 30.0% | |
| ! | CATTTTTGAATATCGCAACA+GGG | - | chr7.2:37595923-37595942 | MS.gene77207:CDS | 30.0% |
| !! | TCATTTTTGAATATCGCAAC+AGG | - | chr7.2:37595922-37595941 | MS.gene77207:CDS | 30.0% |
| !!! | ACTTTTTGACTTGTAGGAAT+TGG | - | chr7.2:37597123-37597142 | MS.gene77207:intron | 30.0% |
| !!! | CTTTTTGACTTGTAGGAATT+GGG | - | chr7.2:37597124-37597143 | MS.gene77207:intron | 30.0% |
| !!! | TGTTTCACTTTTTGACTTGT+AGG | - | chr7.2:37597117-37597136 | MS.gene77207:intron | 30.0% |
| AGAAAAAAAGTTTCCAGCTC+AGG | - | chr7.2:37595865-37595884 | MS.gene77207:CDS | 35.0% | |
| AGGATTGAAAAACCGATACA+AGG | - | chr7.2:37597270-37597289 | MS.gene77207:CDS | 35.0% | |
| ATCCTCAGCAAACTGAAATT+TGG | + | chr7.2:37596889-37596908 | None:intergenic | 35.0% | |
| CAAAGGAAAACTAGGAATCT+AGG | + | chr7.2:37597070-37597089 | None:intergenic | 35.0% | |
| CCCTTCGTTTCATTCTAATA+AGG | + | chr7.2:37596101-37596120 | None:intergenic | 35.0% | |
| CTCTTCTTCAATATAACCTC+AGG | + | chr7.2:37595801-37595820 | None:intergenic | 35.0% | |
| CTGAGGTTATATTGAAGAAG+AGG | - | chr7.2:37595799-37595818 | MS.gene77207:CDS | 35.0% | |
| CTTGTAAATCAGCTCCTTTA+TGG | + | chr7.2:37596965-37596984 | None:intergenic | 35.0% | |
| GGAATATAGTTGAGATCCTT+TGG | + | chr7.2:37595780-37595799 | None:intergenic | 35.0% | |
| GTGCATCAAATTGACAATGT+TGG | - | chr7.2:37597178-37597197 | MS.gene77207:CDS | 35.0% | |
| TCCTCAGCAAACTGAAATTT+GGG | + | chr7.2:37596888-37596907 | None:intergenic | 35.0% | |
| TTGAAAAACCGATACAAGGA+TGG | - | chr7.2:37597274-37597293 | MS.gene77207:CDS | 35.0% | |
| TTGAACCATATGTCACCTAT+GGG | - | chr7.2:37596392-37596411 | MS.gene77207:intron | 35.0% | |
| TTGAGCAGGTAATACATACA+TGG | - | chr7.2:37597040-37597059 | MS.gene77207:intron | 35.0% | |
| TTGTAGGAATTGGGAAAGTT+TGG | - | chr7.2:37597133-37597152 | MS.gene77207:intron | 35.0% | |
| ! | AAAGGAGCTGATTTACAAGA+AGG | - | chr7.2:37596966-37596985 | MS.gene77207:CDS | 35.0% |
| ! | AAGGAGCTGATTTACAAGAA+GGG | - | chr7.2:37596967-37596986 | MS.gene77207:CDS | 35.0% |
| ! | AATCCTTTTAATCCATCTGC+TGG | + | chr7.2:37597256-37597275 | None:intergenic | 35.0% |
| !! | AGAAAGCACTTGTTCAGTTT+GGG | - | chr7.2:37596301-37596320 | MS.gene77207:intron | 35.0% |
| !!! | TGAGCTGGAAACTTTTTTTC+TGG | + | chr7.2:37595866-37595885 | None:intergenic | 35.0% |
| AAAAACCGATACAAGGATGG+TGG | - | chr7.2:37597277-37597296 | MS.gene77207:CDS | 40.0% | |
| AATCTCCACCATCCTTGTAT+CGG | + | chr7.2:37597285-37597304 | None:intergenic | 40.0% | |
| AGGAAGTTGTCCGATTTATG+TGG | - | chr7.2:37597212-37597231 | MS.gene77207:CDS | 40.0% | |
| ATTGGGTTACTTGGAGATCA+AGG | - | chr7.2:37596583-37596602 | MS.gene77207:intron | 40.0% | |
| CAAACTGAACAAGTGCTTTC+TGG | + | chr7.2:37596302-37596321 | None:intergenic | 40.0% | |
| CACAGGAAAGTAAAGATGCA+AGG | + | chr7.2:37596852-37596871 | None:intergenic | 40.0% | |
| CAGATGCTTGCAACTATGTT+AGG | - | chr7.2:37596621-37596640 | MS.gene77207:intron | 40.0% | |
| CCTCAGCAAACTGAAATTTG+GGG | + | chr7.2:37596887-37596906 | None:intergenic | 40.0% | |
| GCTTGCAACTATGTTAGGAA+AGG | - | chr7.2:37596626-37596645 | MS.gene77207:intron | 40.0% | |
| GGATCTCAACTATATTCCTG+AGG | - | chr7.2:37595782-37595801 | MS.gene77207:CDS | 40.0% | |
| GTTCAAAGGGCCACATAAAT+CGG | + | chr7.2:37597225-37597244 | None:intergenic | 40.0% | |
| GTTGAACCATATGTCACCTA+TGG | - | chr7.2:37596391-37596410 | MS.gene77207:intron | 40.0% | |
| TCAATCAATCGCTTACCCAT+AGG | + | chr7.2:37596410-37596429 | None:intergenic | 40.0% | |
| TCATGGAAGATTGGGTTACT+TGG | - | chr7.2:37596574-37596593 | MS.gene77207:intron | 40.0% | |
| !! | AAGCCAGCAGATGGATTAAA+AGG | - | chr7.2:37597250-37597269 | MS.gene77207:CDS | 40.0% |
| !! | ACTATTATGGGCTTGTTGCT+TGG | + | chr7.2:37596153-37596172 | None:intergenic | 40.0% |
| !! | CAGAAAGCACTTGTTCAGTT+TGG | - | chr7.2:37596300-37596319 | MS.gene77207:intron | 40.0% |
| !!! | GGGCTTTTTTATGAAGTCCT+TGG | + | chr7.2:37595895-37595914 | None:intergenic | 40.0% |
| AGCATGGGCCTTGAGTAAAA+AGG | - | chr7.2:37595833-37595852 | MS.gene77207:CDS | 45.0% | |
| CAATGTTGGTCCACACTTCA+AGG | - | chr7.2:37597192-37597211 | MS.gene77207:CDS | 45.0% | |
| CAATTCAGTGAGTGGGTCAA+AGG | + | chr7.2:37597087-37597106 | None:intergenic | 45.0% | |
| GAATGAAACGAAGGGTCAAG+TGG | - | chr7.2:37596106-37596125 | MS.gene77207:CDS | 45.0% | |
| GAGTGGGTCAAAGGAAAACT+AGG | + | chr7.2:37597078-37597097 | None:intergenic | 45.0% | |
| GCATCATGTGTGACATGCAT+AGG | + | chr7.2:37596688-37596707 | None:intergenic | 45.0% | |
| GCTCATTGATGAGATCCTCA+CGG | + | chr7.2:37597315-37597334 | None:intergenic | 45.0% | |
| GCTTACCCATAGGTGACATA+TGG | + | chr7.2:37596400-37596419 | None:intergenic | 45.0% | |
| GGACTTCATAAAAAAGCCCG+AGG | - | chr7.2:37595896-37595915 | MS.gene77207:CDS | 45.0% | |
| GTCTTTGTGAAGCCAACTGA+TGG | - | chr7.2:37596346-37596365 | MS.gene77207:intron | 45.0% | |
| TGGGGATAGTGCATATACAC+AGG | + | chr7.2:37596869-37596888 | None:intergenic | 45.0% | |
| ! | GAGTTGCGCCTTTTTACTCA+AGG | + | chr7.2:37595844-37595863 | None:intergenic | 45.0% |
| !! | ACAAGGATGGTGGAGATTCA+GGG | - | chr7.2:37597287-37597306 | MS.gene77207:CDS | 45.0% |
| !! | CCCCAAATTTCAGTTTGCTG+AGG | - | chr7.2:37596884-37596903 | MS.gene77207:intron | 45.0% |
| !! | GCTGGCTTGTTCAGTTCAAA+GGG | + | chr7.2:37597238-37597257 | None:intergenic | 45.0% |
| !! | TACAAGGATGGTGGAGATTC+AGG | - | chr7.2:37597286-37597305 | MS.gene77207:CDS | 45.0% |
| !! | TGCTGGCTTGTTCAGTTCAA+AGG | + | chr7.2:37597239-37597258 | None:intergenic | 45.0% |
| AACGAAGGGTCAAGTGGAGA+CGG | - | chr7.2:37596112-37596131 | MS.gene77207:CDS | 50.0% | |
| AGAGGAAACACAGCGAAGCA+TGG | - | chr7.2:37595817-37595836 | MS.gene77207:CDS | 50.0% | |
| CGGACAACTTCCTTGAAGTG+TGG | + | chr7.2:37597205-37597224 | None:intergenic | 50.0% | |
| GAACTGAACAAGCCAGCAGA+TGG | - | chr7.2:37597241-37597260 | MS.gene77207:CDS | 50.0% | |
| GAAGCCAACTGATGGAGTGA+TGG | - | chr7.2:37596354-37596373 | MS.gene77207:intron | 50.0% | |
| GAGGAAACACAGCGAAGCAT+GGG | - | chr7.2:37595818-37595837 | MS.gene77207:CDS | 50.0% | |
| GGCTGAAGAGGAACAACCAA+AGG | - | chr7.2:37595761-37595780 | MS.gene77207:CDS | 50.0% | |
| TTGGCCATCACTCCATCAGT+TGG | + | chr7.2:37596361-37596380 | None:intergenic | 50.0% | |
| TTTCCAGCTCAGGAAGTCCA+AGG | - | chr7.2:37595875-37595894 | MS.gene77207:CDS | 50.0% | |
| !! | CAAGGATGGTGGAGATTCAG+GGG | - | chr7.2:37597288-37597307 | MS.gene77207:CDS | 50.0% |
| ACGAAGGGTCAAGTGGAGAC+GGG | - | chr7.2:37596113-37596132 | MS.gene77207:CDS | 55.0% | |
| AGTCCTTGGACTTCCTGAGC+TGG | + | chr7.2:37595881-37595900 | None:intergenic | 55.0% | |
| GGAGACGGGGAGATAAATCG+AGG | - | chr7.2:37596127-37596146 | MS.gene77207:CDS | 55.0% | |
| TGATGGAGTGATGGCCAAGC+TGG | - | chr7.2:37596363-37596382 | MS.gene77207:intron | 55.0% | |
| TGGTTCAACTCTCGCCAGCT+TGG | + | chr7.2:37596380-37596399 | None:intergenic | 55.0% | |
| CGAAGGGTCAAGTGGAGACG+GGG | - | chr7.2:37596114-37596133 | MS.gene77207:CDS | 60.0% | |
| TGGAGATTCAGGGGACCGTG+AGG | - | chr7.2:37597297-37597316 | MS.gene77207:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 37595759 | 37597354 | 37595759 | ID=MS.gene77207 |
| chr7.2 | mRNA | 37595759 | 37597354 | 37595759 | ID=MS.gene77207.t1;Parent=MS.gene77207 |
| chr7.2 | exon | 37597169 | 37597354 | 37597169 | ID=MS.gene77207.t1.exon1;Parent=MS.gene77207.t1 |
| chr7.2 | CDS | 37597169 | 37597354 | 37597169 | ID=cds.MS.gene77207.t1;Parent=MS.gene77207.t1 |
| chr7.2 | exon | 37596926 | 37597023 | 37596926 | ID=MS.gene77207.t1.exon2;Parent=MS.gene77207.t1 |
| chr7.2 | CDS | 37596926 | 37597023 | 37596926 | ID=cds.MS.gene77207.t1;Parent=MS.gene77207.t1 |
| chr7.2 | exon | 37596700 | 37596837 | 37596700 | ID=MS.gene77207.t1.exon3;Parent=MS.gene77207.t1 |
| chr7.2 | CDS | 37596700 | 37596837 | 37596700 | ID=cds.MS.gene77207.t1;Parent=MS.gene77207.t1 |
| chr7.2 | exon | 37596066 | 37596168 | 37596066 | ID=MS.gene77207.t1.exon4;Parent=MS.gene77207.t1 |
| chr7.2 | CDS | 37596066 | 37596168 | 37596066 | ID=cds.MS.gene77207.t1;Parent=MS.gene77207.t1 |
| chr7.2 | exon | 37595759 | 37595974 | 37595759 | ID=MS.gene77207.t1.exon5;Parent=MS.gene77207.t1 |
| chr7.2 | CDS | 37595759 | 37595974 | 37595759 | ID=cds.MS.gene77207.t1;Parent=MS.gene77207.t1 |
| Gene Sequence |
| Protein sequence |
