Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051791.t1 | XP_013458440.1 | 92.1 | 265 | 21 | 0 | 1 | 265 | 30 | 294 | 5.80E-129 | 470.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051791.t1 | O64571 | 33.0 | 194 | 105 | 6 | 2 | 181 | 31 | 213 | 1.6e-13 | 78.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051791.t1 | A0A072UT04 | 92.1 | 265 | 21 | 0 | 1 | 265 | 30 | 294 | 4.2e-129 | 470.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051791 | MS.gene053122 | 0.821388 | 4.15E-53 | -1.69E-46 |
| MS.gene051791 | MS.gene053226 | 0.804387 | 2.21E-49 | -1.69E-46 |
| MS.gene051791 | MS.gene056215 | 0.811627 | 6.37E-51 | -1.69E-46 |
| MS.gene051791 | MS.gene060429 | 0.825759 | 3.93E-54 | -1.69E-46 |
| MS.gene051791 | MS.gene066105 | 0.813063 | 3.09E-51 | -1.69E-46 |
| MS.gene051791 | MS.gene066566 | 0.838971 | 2.09E-57 | -1.69E-46 |
| MS.gene051791 | MS.gene067521 | 0.822658 | 2.11E-53 | -1.69E-46 |
| MS.gene051791 | MS.gene070943 | 0.804903 | 1.73E-49 | -1.69E-46 |
| MS.gene051791 | MS.gene07100 | 0.800154 | 1.65E-48 | -1.69E-46 |
| MS.gene051791 | MS.gene071958 | 0.810488 | 1.12E-50 | -1.69E-46 |
| MS.gene051791 | MS.gene073092 | 0.822433 | 2.38E-53 | -1.69E-46 |
| MS.gene051791 | MS.gene073300 | 0.81763 | 2.99E-52 | -1.69E-46 |
| MS.gene051791 | MS.gene073785 | 0.821449 | 4.01E-53 | -1.69E-46 |
| MS.gene051791 | MS.gene074382 | 0.802667 | 5.03E-49 | -1.69E-46 |
| MS.gene051791 | MS.gene07719 | 0.828832 | 7.22E-55 | -1.69E-46 |
| MS.gene051791 | MS.gene08537 | 0.821533 | 3.84E-53 | -1.69E-46 |
| MS.gene051791 | MS.gene20230 | 0.804147 | 2.48E-49 | -1.69E-46 |
| MS.gene051791 | MS.gene22964 | 0.813325 | 2.71E-51 | -1.69E-46 |
| MS.gene051791 | MS.gene22974 | 0.815361 | 9.62E-52 | -1.69E-46 |
| MS.gene051791 | MS.gene24264 | 0.812399 | 4.32E-51 | -1.69E-46 |
| MS.gene051791 | MS.gene24846 | 0.816644 | 4.97E-52 | -1.69E-46 |
| MS.gene051791 | MS.gene24930 | 0.811337 | 7.36E-51 | -1.69E-46 |
| MS.gene051791 | MS.gene25673 | 0.888068 | 8.19E-73 | -1.69E-46 |
| MS.gene051791 | MS.gene26976 | 0.827977 | 1.16E-54 | -1.69E-46 |
| MS.gene051791 | MS.gene27299 | 0.824817 | 6.57E-54 | -1.69E-46 |
| MS.gene051791 | MS.gene27569 | 0.80341 | 3.53E-49 | -1.69E-46 |
| MS.gene051791 | MS.gene30946 | 0.807157 | 5.80E-50 | -1.69E-46 |
| MS.gene051791 | MS.gene32419 | 0.814877 | 1.23E-51 | -1.69E-46 |
| MS.gene051791 | MS.gene35135 | 0.831989 | 1.22E-55 | -1.69E-46 |
| MS.gene051791 | MS.gene35438 | 0.802288 | 6.02E-49 | -1.69E-46 |
| MS.gene051791 | MS.gene35533 | 0.814733 | 1.33E-51 | -1.69E-46 |
| MS.gene051791 | MS.gene36568 | 0.805712 | 1.17E-49 | -1.69E-46 |
| MS.gene051791 | MS.gene38256 | 0.816089 | 6.62E-52 | -1.69E-46 |
| MS.gene051791 | MS.gene40595 | 0.829117 | 6.16E-55 | -1.69E-46 |
| MS.gene051791 | MS.gene43992 | 0.828333 | 9.53E-55 | -1.69E-46 |
| MS.gene051791 | MS.gene44141 | 0.818341 | 2.06E-52 | -1.69E-46 |
| MS.gene051791 | MS.gene45425 | 0.804177 | 2.45E-49 | -1.69E-46 |
| MS.gene051791 | MS.gene52404 | 0.827182 | 1.80E-54 | -1.69E-46 |
| MS.gene051791 | MS.gene55818 | 0.835641 | 1.49E-56 | -1.69E-46 |
| MS.gene051791 | MS.gene56067 | 0.847807 | 9.15E-60 | -1.69E-46 |
| MS.gene051791 | MS.gene56414 | 0.811647 | 6.31E-51 | -1.69E-46 |
| MS.gene051791 | MS.gene58719 | 0.808375 | 3.19E-50 | -1.69E-46 |
| MS.gene051791 | MS.gene61739 | 0.803002 | 4.29E-49 | -1.69E-46 |
| MS.gene051791 | MS.gene67139 | 0.803294 | 3.73E-49 | -1.69E-46 |
| MS.gene051791 | MS.gene68663 | 0.803362 | 3.61E-49 | -1.69E-46 |
| MS.gene051791 | MS.gene69778 | 0.814713 | 1.34E-51 | -1.69E-46 |
| MS.gene051791 | MS.gene69947 | 0.818064 | 2.38E-52 | -1.69E-46 |
| MS.gene051791 | MS.gene70656 | 0.821526 | 3.85E-53 | -1.69E-46 |
| MS.gene051791 | MS.gene75625 | 0.81441 | 1.56E-51 | -1.69E-46 |
| MS.gene051791 | MS.gene77207 | 0.82618 | 3.13E-54 | -1.69E-46 |
| MS.gene051791 | MS.gene77739 | 0.819162 | 1.34E-52 | -1.69E-46 |
| MS.gene051791 | MS.gene78130 | 0.828748 | 7.57E-55 | -1.69E-46 |
| MS.gene051791 | MS.gene80886 | 0.804651 | 1.95E-49 | -1.69E-46 |
| MS.gene051791 | MS.gene84300 | 0.800716 | 1.26E-48 | -1.69E-46 |
| MS.gene051791 | MS.gene86150 | 0.819032 | 1.44E-52 | -1.69E-46 |
| MS.gene051791 | MS.gene89562 | 0.814394 | 1.58E-51 | -1.69E-46 |
| MS.gene051791 | MS.gene91485 | 0.809856 | 1.54E-50 | -1.69E-46 |
| MS.gene051791 | MS.gene93501 | 0.803782 | 2.96E-49 | -1.69E-46 |
| MS.gene051791 | MS.gene96322 | 0.835034 | 2.12E-56 | -1.69E-46 |
| MS.gene051791 | MS.gene96338 | 0.813182 | 2.91E-51 | -1.69E-46 |
| MS.gene051791 | MS.gene98953 | 0.804921 | 1.71E-49 | -1.69E-46 |
| MS.gene051791 | MS.gene99657 | 0.802104 | 6.57E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051791.t1 | MTR_4g125720 | 92.075 | 265 | 21 | 0 | 1 | 265 | 30 | 294 | 2.17e-179 | 495 |
| MS.gene051791.t1 | MTR_4g125720 | 92.271 | 207 | 16 | 0 | 1 | 207 | 30 | 236 | 1.93e-139 | 392 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051791.t1 | AT2G19385 | 48.507 | 268 | 113 | 7 | 1 | 265 | 30 | 275 | 2.82e-61 | 194 |
| MS.gene051791.t1 | AT2G19380 | 34.463 | 177 | 88 | 6 | 1 | 161 | 30 | 194 | 8.87e-19 | 85.9 |
| MS.gene051791.t1 | AT2G19380 | 44.578 | 83 | 44 | 1 | 49 | 131 | 207 | 287 | 1.72e-13 | 70.5 |
Find 54 sgRNAs with CRISPR-Local
Find 196 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACATCAGTTGACGTGGAAAA+TGG | 0.191316 | 8.2:-7020593 | MS.gene051791:CDS |
| GGAAAATGGGGAAGTATTTC+AGG | 0.217234 | 8.2:-7020579 | MS.gene051791:CDS |
| AAACTTCATTCACCGGTTTC+AGG | 0.267736 | 8.2:+7020684 | None:intergenic |
| CAACAGGAATGTTCAATCTT+TGG | 0.280454 | 8.2:+7020009 | None:intergenic |
| CATCAGTTGACGTGGAAAAT+GGG | 0.380294 | 8.2:-7020592 | MS.gene051791:CDS |
| CTTGTTCTCAACTGCAAAGT+TGG | 0.386423 | 8.2:+7020048 | None:intergenic |
| TAGATTCCTGCAGTGCTTTG+AGG | 0.398509 | 8.2:+7020234 | None:intergenic |
| TTCTTCATCTTCAATCCATC+AGG | 0.401465 | 8.2:+7020272 | None:intergenic |
| AATTCAACATACAAATTTCA+AGG | 0.401997 | 8.2:+7020505 | None:intergenic |
| CTTTGTTTGCCATCTTTGAC+AGG | 0.405588 | 8.2:+7021787 | None:intergenic |
| TCAGAAGACTCGTGCAACTT+TGG | 0.435496 | 8.2:+7020716 | None:intergenic |
| GCTTCGAAGCATGGAACGCT+CGG | 0.436244 | 8.2:+7020837 | None:intergenic |
| TCCACTGCATCCTTTGCATC+AGG | 0.440074 | 8.2:+7020785 | None:intergenic |
| TTTGCCATCTTTGACAGGCT+TGG | 0.441946 | 8.2:+7021792 | None:intergenic |
| CAGGCGCAAAATTATCTGTC+TGG | 0.451138 | 8.2:+7020804 | None:intergenic |
| GGAGACGGGTTCTAATGATA+TGG | 0.458688 | 8.2:-7020765 | MS.gene051791:CDS |
| ATTGACTGTGGACAGATGTT+TGG | 0.460865 | 8.2:-7023071 | MS.gene051791:CDS |
| CAAGAGAGAGGAAAATAAAG+TGG | 0.462140 | 8.2:-7020547 | MS.gene051791:CDS |
| CAGGAAAAGTATGGTCCAAA+AGG | 0.462353 | 8.2:-7021844 | MS.gene051791:CDS |
| TGAACAAAATAACCTGAAAC+CGG | 0.469254 | 8.2:-7020696 | MS.gene051791:CDS |
| TACTGGTGGCAGCATCCTGA+TGG | 0.473972 | 8.2:-7020287 | MS.gene051791:intron |
| CTCAACTGCAAAGTTGGAGC+TGG | 0.492457 | 8.2:+7020054 | None:intergenic |
| GAACAAGTATGTGCGATTAG+TGG | 0.494270 | 8.2:-7020032 | MS.gene051791:CDS |
| GCAAAGGATGCAGTGGAGAC+GGG | 0.502647 | 8.2:-7020779 | MS.gene051791:CDS |
| TGCAAAGGATGCAGTGGAGA+CGG | 0.510937 | 8.2:-7020780 | MS.gene051791:CDS |
| CTTCGAAGCATGGAACGCTC+GGG | 0.518211 | 8.2:+7020838 | None:intergenic |
| TCGGAAGAAACTTCATTCAC+CGG | 0.522070 | 8.2:+7020677 | None:intergenic |
| CTAGTGGTTGCTTCGAAGCA+TGG | 0.522690 | 8.2:+7020828 | None:intergenic |
| GAGCGAGGCGATTGAGCAGA+AGG | 0.538864 | 8.2:-7020186 | MS.gene051791:intron |
| GCTGCCAAGCCTGTCAAAGA+TGG | 0.543446 | 8.2:-7021796 | MS.gene051791:CDS |
| AAATTATCTGTCTGGACTAG+TGG | 0.555342 | 8.2:+7020812 | None:intergenic |
| GCTAGTCGTTGATATTAATG+TGG | 0.556605 | 8.2:-7021764 | MS.gene051791:CDS |
| CTAGTCGTTGATATTAATGT+GGG | 0.562155 | 8.2:-7021763 | MS.gene051791:CDS |
| AGTTGTCCTCAAAGCACTGC+AGG | 0.573521 | 8.2:-7020240 | MS.gene051791:CDS |
| AACGTCCTCCGTGGTTCTGT+AGG | 0.574054 | 8.2:-7021732 | MS.gene051791:intron |
| GAAAATGGGGAAGTATTTCA+GGG | 0.576073 | 8.2:-7020578 | MS.gene051791:CDS |
| ATGCTGAAGGAAAGAAACAC+GGG | 0.581891 | 8.2:-7020868 | MS.gene051791:CDS |
| GCACTTCTTCTACATGCTGA+AGG | 0.586895 | 8.2:-7020881 | MS.gene051791:CDS |
| ATCAGTTGACGTGGAAAATG+GGG | 0.599482 | 8.2:-7020591 | MS.gene051791:CDS |
| CACACAGTGTATTACAGAAG+CGG | 0.604982 | 8.2:-7023027 | MS.gene051791:intron |
| AAGTATGGTCCAAAAGGCCA+AGG | 0.606114 | 8.2:-7021838 | MS.gene051791:CDS |
| GGAAGTATTTCAGGGCGAGA+AGG | 0.613916 | 8.2:-7020570 | MS.gene051791:CDS |
| AGGGCGAGAAGGCAAGAGAG+AGG | 0.620409 | 8.2:-7020559 | MS.gene051791:CDS |
| CATGCTGAAGGAAAGAAACA+CGG | 0.639025 | 8.2:-7020869 | MS.gene051791:CDS |
| CTGTCAAAGATGGCAAACAA+AGG | 0.639970 | 8.2:-7021786 | MS.gene051791:CDS |
| TAGCTTTCGTGCATTGACTG+TGG | 0.661020 | 8.2:-7023083 | MS.gene051791:CDS |
| GCCTGATGCAAAGGATGCAG+TGG | 0.663160 | 8.2:-7020786 | MS.gene051791:CDS |
| GAATGACACATCAGTTGACG+TGG | 0.669822 | 8.2:-7020600 | MS.gene051791:CDS |
| AAATGAAAATGAATTGAGCG+AGG | 0.672838 | 8.2:-7020201 | MS.gene051791:CDS |
| CTTCTGTAATACACTGTGTG+TGG | 0.673491 | 8.2:+7023030 | None:intergenic |
| GCTTAGCTGAACGTCCTCCG+TGG | 0.705410 | 8.2:-7021741 | MS.gene051791:CDS |
| AGTATATACCTACAGAACCA+CGG | 0.706642 | 8.2:+7021724 | None:intergenic |
| TGCTGAAGGAAAGAAACACG+GGG | 0.771538 | 8.2:-7020867 | MS.gene051791:CDS |
| ATATACCTACAGAACCACGG+AGG | 0.855057 | 8.2:+7021727 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTACTAAAATTAATACTAA+AGG | + | chr8.2:7022983-7023002 | None:intergenic | 10.0% |
| !!! | TGATCATTTATATTATTTTA+AGG | - | chr8.2:7020996-7021015 | MS.gene051791:intron | 10.0% |
| !!! | TTTTATGTAAATGTAAATAT+AGG | - | chr8.2:7021639-7021658 | MS.gene051791:intron | 10.0% |
| !!! | TTTTTATTATAAAATAGTCT+CGG | + | chr8.2:7022080-7022099 | None:intergenic | 10.0% |
| !! | AATACATTTCTTAGTTTAAT+TGG | - | chr8.2:7021936-7021955 | MS.gene051791:intron | 15.0% |
| !! | AATATAAAAATTCATTATGC+TGG | + | chr8.2:7021124-7021143 | None:intergenic | 15.0% |
| !! | TGAATAATAAACTATCAATT+TGG | - | chr8.2:7020832-7020851 | MS.gene051791:CDS | 15.0% |
| !! | TTATCTATATATGTTATAGT+GGG | - | chr8.2:7022649-7022668 | MS.gene051791:intron | 15.0% |
| !! | TTTATCTATATATGTTATAG+TGG | - | chr8.2:7022648-7022667 | MS.gene051791:intron | 15.0% |
| !!! | ATAATTAATGGACAAAAATA+AGG | + | chr8.2:7020117-7020136 | None:intergenic | 15.0% |
| !!! | CAATTTGTTTCAAAAAATAA+AGG | + | chr8.2:7021768-7021787 | None:intergenic | 15.0% |
| !!! | CTTTATTTTTTGAAACAAAT+TGG | - | chr8.2:7021766-7021785 | MS.gene051791:CDS | 15.0% |
| !!! | TGATAGATTGATAATAATTT+AGG | + | chr8.2:7020921-7020940 | None:intergenic | 15.0% |
| !! | AAAAACAAATATTGGTAAAG+AGG | + | chr8.2:7022106-7022125 | None:intergenic | 20.0% |
| !! | AATTCAACATACAAATTTCA+AGG | + | chr8.2:7022599-7022618 | None:intergenic | 20.0% |
| !! | ATTCAACCATAAGTTAAAAA+AGG | + | chr8.2:7021685-7021704 | None:intergenic | 20.0% |
| !! | CACAATCGAAAATTATAAAA+AGG | + | chr8.2:7022014-7022033 | None:intergenic | 20.0% |
| !! | TAGATATTATTTCACTCTTA+TGG | - | chr8.2:7022130-7022149 | MS.gene051791:intron | 20.0% |
| !! | TCTAGAAGAAAAACAAATAT+TGG | + | chr8.2:7022114-7022133 | None:intergenic | 20.0% |
| !! | TGTTATATTTCAAAAGTTCA+GGG | - | chr8.2:7021024-7021043 | MS.gene051791:intron | 20.0% |
| !! | TTGTCCATTAATTATAGATT+AGG | - | chr8.2:7020122-7020141 | MS.gene051791:intron | 20.0% |
| !! | TTGTTATATTTCAAAAGTTC+AGG | - | chr8.2:7021023-7021042 | MS.gene051791:intron | 20.0% |
| !! | TTTCTGTGTAAATAAACTAT+GGG | - | chr8.2:7020518-7020537 | MS.gene051791:CDS | 20.0% |
| !!! | AATTTCATTTTCATAGTTCA+GGG | + | chr8.2:7020891-7020910 | None:intergenic | 20.0% |
| !!! | ATTTTTCCTCTTTTTCTTTT+CGG | + | chr8.2:7022446-7022465 | None:intergenic | 20.0% |
| !!! | GAAATTTGTATGTTGAATTT+TGG | - | chr8.2:7022600-7022619 | MS.gene051791:intron | 20.0% |
| !!! | TAATTTCATTTTCATAGTTC+AGG | + | chr8.2:7020892-7020911 | None:intergenic | 20.0% |
| !!! | TATCATTTTCTCTCATATTT+TGG | - | chr8.2:7020864-7020883 | MS.gene051791:CDS | 20.0% |
| !!! | TTTTCTGTGTAAATAAACTA+TGG | - | chr8.2:7020517-7020536 | MS.gene051791:CDS | 20.0% |
| ! | AAATGATAGTCCTAAGTTAA+AGG | + | chr8.2:7020680-7020699 | None:intergenic | 25.0% |
| ! | AGAGAGAAACATAATTATCA+TGG | - | chr8.2:7021501-7021520 | MS.gene051791:intron | 25.0% |
| ! | ATAGAAGAGAGTGATAATTT+AGG | + | chr8.2:7020952-7020971 | None:intergenic | 25.0% |
| ! | ATGAGAGAAAATGATAGTTT+AGG | + | chr8.2:7020860-7020879 | None:intergenic | 25.0% |
| ! | ATTACAGCAGGAAAATTATA+TGG | + | chr8.2:7022781-7022800 | None:intergenic | 25.0% |
| ! | ATTATTTCACTCTTATGGTT+TGG | - | chr8.2:7022135-7022154 | MS.gene051791:intron | 25.0% |
| ! | GAAAAAAGTAAATAAAAGCG+CGG | + | chr8.2:7021992-7022011 | None:intergenic | 25.0% |
| ! | GAATGATATTAGTGTTAATC+AGG | - | chr8.2:7021831-7021850 | MS.gene051791:CDS | 25.0% |
| ! | TAGAAGAGAGTGATAATTTA+GGG | + | chr8.2:7020951-7020970 | None:intergenic | 25.0% |
| ! | TAGAGAGCTAAATTCAAAAT+AGG | + | chr8.2:7020341-7020360 | None:intergenic | 25.0% |
| ! | TCAAATTAGTCATTCCAAAA+AGG | - | chr8.2:7020294-7020313 | MS.gene051791:intron | 25.0% |
| ! | TGAGAGAAAATGATAGTTTA+GGG | + | chr8.2:7020859-7020878 | None:intergenic | 25.0% |
| ! | TTACAGCAGGAAAATTATAT+GGG | + | chr8.2:7022780-7022799 | None:intergenic | 25.0% |
| ! | TTCTGTGTAAATAAACTATG+GGG | - | chr8.2:7020519-7020538 | MS.gene051791:CDS | 25.0% |
| !! | ATTAAGTTGTTTATCCAAAC+AGG | + | chr8.2:7020150-7020169 | None:intergenic | 25.0% |
| !! | TTAAGTTGTTTATCCAAACA+GGG | + | chr8.2:7020149-7020168 | None:intergenic | 25.0% |
| !! | TTCAAAGTTTCCTTTAACTT+AGG | - | chr8.2:7020667-7020686 | MS.gene051791:CDS | 25.0% |
| !! | TTTTACATTAAACGTAAGCA+TGG | + | chr8.2:7021718-7021737 | None:intergenic | 25.0% |
| !!! | CTTCTATTTTGAAAGTAGTT+GGG | - | chr8.2:7020965-7020984 | MS.gene051791:intron | 25.0% |
| !!! | TAATCTGCTTATTGTTTTAC+TGG | - | chr8.2:7022797-7022816 | MS.gene051791:intron | 25.0% |
| !!! | TCTCTAAAATGAGAAAATCA+AGG | - | chr8.2:7020355-7020374 | MS.gene051791:intron | 25.0% |
| !!! | TCTTCTATTTTGAAAGTAGT+TGG | - | chr8.2:7020964-7020983 | MS.gene051791:intron | 25.0% |
| !!! | TTCTATTTTGAAAGTAGTTG+GGG | - | chr8.2:7020966-7020985 | MS.gene051791:intron | 25.0% |
| !!! | TTGAAACAAATTGGTTTTTG+AGG | - | chr8.2:7021775-7021794 | MS.gene051791:CDS | 25.0% |
| !!! | TTTACTCAATGCTATTTCTT+TGG | - | chr8.2:7020618-7020637 | MS.gene051791:CDS | 25.0% |
| AAATGAAAATGAATTGAGCG+AGG | - | chr8.2:7022900-7022919 | MS.gene051791:intron | 30.0% | |
| AAATTGAGGATGGATATTAG+AGG | + | chr8.2:7020426-7020445 | None:intergenic | 30.0% | |
| AAGCTATATGAACATGTCAT+AGG | - | chr8.2:7020215-7020234 | MS.gene051791:CDS | 30.0% | |
| ACTAATTTGAGCTTACTTAC+CGG | + | chr8.2:7020284-7020303 | None:intergenic | 30.0% | |
| AGGATGTTGAAAAATTAGCT+GGG | - | chr8.2:7021659-7021678 | MS.gene051791:intron | 30.0% | |
| ATAAGTACTTGTAAGACTGT+TGG | + | chr8.2:7020260-7020279 | None:intergenic | 30.0% | |
| ATTGACTAACAAATTGAGGA+TGG | + | chr8.2:7020436-7020455 | None:intergenic | 30.0% | |
| CATGAACCGTAAGAAATAAT+AGG | + | chr8.2:7021585-7021604 | None:intergenic | 30.0% | |
| CTAGTCGTTGATATTAATGT+GGG | - | chr8.2:7021338-7021357 | MS.gene051791:intron | 30.0% | |
| CTTATGAAAACAGCTTATTG+TGG | + | chr8.2:7020198-7020217 | None:intergenic | 30.0% | |
| CTTATGGTTGAATTATGTAG+TGG | - | chr8.2:7021692-7021711 | MS.gene051791:intron | 30.0% | |
| GATAAAGCAGAAAACAAGAA+AGG | + | chr8.2:7022634-7022653 | None:intergenic | 30.0% | |
| GGGTCCTAATCTATAATTAA+TGG | + | chr8.2:7020129-7020148 | None:intergenic | 30.0% | |
| TAAGTACTTGTAAGACTGTT+GGG | + | chr8.2:7020259-7020278 | None:intergenic | 30.0% | |
| TACAGCAGGAAAATTATATG+GGG | + | chr8.2:7022779-7022798 | None:intergenic | 30.0% | |
| TAGGATGTTGAAAAATTAGC+TGG | - | chr8.2:7021658-7021677 | MS.gene051791:intron | 30.0% | |
| TATAGTGATATAGAGATAGC+TGG | - | chr8.2:7022698-7022717 | MS.gene051791:intron | 30.0% | |
| TGAACAAAATAACCTGAAAC+CGG | - | chr8.2:7022405-7022424 | MS.gene051791:intron | 30.0% | |
| TGGACAAAAATAAGGCAAAA+AGG | + | chr8.2:7020109-7020128 | None:intergenic | 30.0% | |
| TTATCTGTTTATTCTGAGCA+TGG | - | chr8.2:7022675-7022694 | MS.gene051791:intron | 30.0% | |
| TTTCTTCCGAAAAGAAAAAG+AGG | - | chr8.2:7022437-7022456 | MS.gene051791:intron | 30.0% | |
| ! | AACCATTGACTAACAAATTG+AGG | + | chr8.2:7020440-7020459 | None:intergenic | 30.0% |
| ! | AGGAAAAATGAAGCATTAGA+GGG | - | chr8.2:7022457-7022476 | MS.gene051791:intron | 30.0% |
| ! | AGTCCTCCTATTATTTCTTA+CGG | - | chr8.2:7021576-7021595 | MS.gene051791:intron | 30.0% |
| !! | ATCCTCAATTTGTTAGTCAA+TGG | - | chr8.2:7020435-7020454 | MS.gene051791:intron | 30.0% |
| !! | GTGGTTTGAGTTTTGTAAAA+CGG | - | chr8.2:7020571-7020590 | MS.gene051791:CDS | 30.0% |
| !! | TCTATTTTGAAAGTAGTTGG+GGG | - | chr8.2:7020967-7020986 | MS.gene051791:intron | 30.0% |
| !! | TGGTTTGAGTTTTGTAAAAC+GGG | - | chr8.2:7020572-7020591 | MS.gene051791:CDS | 30.0% |
| !! | TTCGATTTTCAGGAAAAGTA+TGG | - | chr8.2:7021248-7021267 | MS.gene051791:intron | 30.0% |
| AACAATAAGCAGATTACAGC+AGG | + | chr8.2:7022793-7022812 | None:intergenic | 35.0% | |
| AAGTACTTGTAAGACTGTTG+GGG | + | chr8.2:7020258-7020277 | None:intergenic | 35.0% | |
| AATCAGGTAAGAGTCTAAAC+AGG | - | chr8.2:7021847-7021866 | MS.gene051791:intron | 35.0% | |
| AATGCCCTAAAGTAGTTAGA+AGG | + | chr8.2:7020747-7020766 | None:intergenic | 35.0% | |
| ACACTACAATATGCCGTTAT+TGG | + | chr8.2:7022057-7022076 | None:intergenic | 35.0% | |
| ACAGAAACACAACTCATAGA+TGG | + | chr8.2:7022952-7022971 | None:intergenic | 35.0% | |
| ACGGTTCATGCAATCATAAA+GGG | - | chr8.2:7021595-7021614 | MS.gene051791:intron | 35.0% | |
| ACTCACCTTCTAACTACTTT+AGG | - | chr8.2:7020739-7020758 | MS.gene051791:CDS | 35.0% | |
| ACTTGAGAAGCTGAATTAAG+GGG | + | chr8.2:7020553-7020572 | None:intergenic | 35.0% | |
| AGTATATACCTACAGAACCA+CGG | + | chr8.2:7021380-7021399 | None:intergenic | 35.0% | |
| AGTCTTACAAGTACTTATGC+CGG | - | chr8.2:7020262-7020281 | MS.gene051791:CDS | 35.0% | |
| CAAGAGAGAGGAAAATAAAG+TGG | - | chr8.2:7022554-7022573 | MS.gene051791:intron | 35.0% | |
| CACTTGAGAAGCTGAATTAA+GGG | + | chr8.2:7020554-7020573 | None:intergenic | 35.0% | |
| CCTCGTATCATTACAATCAT+GGG | - | chr8.2:7020703-7020722 | MS.gene051791:CDS | 35.0% | |
| CTAATACAGTGCAGTCAATT+TGG | + | chr8.2:7021080-7021099 | None:intergenic | 35.0% | |
| CTCACCTTCTAACTACTTTA+GGG | - | chr8.2:7020740-7020759 | MS.gene051791:CDS | 35.0% | |
| CTCGTATCATTACAATCATG+GGG | - | chr8.2:7020704-7020723 | MS.gene051791:CDS | 35.0% | |
| GAACCGTAAGAAATAATAGG+AGG | + | chr8.2:7021582-7021601 | None:intergenic | 35.0% | |
| GCTAGTCGTTGATATTAATG+TGG | - | chr8.2:7021337-7021356 | MS.gene051791:intron | 35.0% | |
| TACGGTTCATGCAATCATAA+AGG | - | chr8.2:7021594-7021613 | MS.gene051791:intron | 35.0% | |
| TCCTCGTATCATTACAATCA+TGG | - | chr8.2:7020702-7020721 | MS.gene051791:CDS | 35.0% | |
| TGGTAAGTGTTTGTGCTATA+AGG | + | chr8.2:7020178-7020197 | None:intergenic | 35.0% | |
| TTATAGATTAGGACCCTGTT+TGG | - | chr8.2:7020133-7020152 | MS.gene051791:intron | 35.0% | |
| TTCTTCATCTTCAATCCATC+AGG | + | chr8.2:7022832-7022851 | None:intergenic | 35.0% | |
| ! | AAATTATCTGTCTGGACTAG+TGG | + | chr8.2:7022292-7022311 | None:intergenic | 35.0% |
| ! | CAGCATTCAAAGTTTTTCCT+TGG | + | chr8.2:7021283-7021302 | None:intergenic | 35.0% |
| ! | CTCATTTTGCTTCGATTTTC+AGG | - | chr8.2:7021238-7021257 | MS.gene051791:intron | 35.0% |
| ! | GAGGAAAAATGAAGCATTAG+AGG | - | chr8.2:7022456-7022475 | MS.gene051791:intron | 35.0% |
| !! | AAAGTTTTTCCTTGGCCTTT+TGG | + | chr8.2:7021275-7021294 | None:intergenic | 35.0% |
| !! | GAAAATGGGGAAGTATTTCA+GGG | - | chr8.2:7022523-7022542 | MS.gene051791:intron | 35.0% |
| !! | TCTGCTTATTGTTTTACTGG+TGG | - | chr8.2:7022800-7022819 | MS.gene051791:intron | 35.0% |
| !!! | TTCTTTGGTTTTCCTCAATG+TGG | - | chr8.2:7020633-7020652 | MS.gene051791:CDS | 35.0% |
| AACTATGACTCTCTCCGATT+TGG | + | chr8.2:7021051-7021070 | None:intergenic | 40.0% | |
| ACATCAGTTGACGTGGAAAA+TGG | - | chr8.2:7022508-7022527 | MS.gene051791:intron | 40.0% | |
| AGCGATTTACTCACTTCTAG+AGG | - | chr8.2:7020479-7020498 | MS.gene051791:intron | 40.0% | |
| AGGTTCAAGTGTAACAACCT+AGG | + | chr8.2:7020321-7020340 | None:intergenic | 40.0% | |
| ATCAGTTGACGTGGAAAATG+GGG | - | chr8.2:7022510-7022529 | MS.gene051791:intron | 40.0% | |
| ATGCTGAAGGAAAGAAACAC+GGG | - | chr8.2:7022233-7022252 | MS.gene051791:intron | 40.0% | |
| ATTGACTGTGGACAGATGTT+TGG | - | chr8.2:7020030-7020049 | MS.gene051791:CDS | 40.0% | |
| CAAAAGTTCAGGGACCAAAT+CGG | - | chr8.2:7021034-7021053 | MS.gene051791:intron | 40.0% | |
| CACAACTCATAGATGGACAA+TGG | + | chr8.2:7022945-7022964 | None:intergenic | 40.0% | |
| CACACAGTGTATTACAGAAG+CGG | - | chr8.2:7020074-7020093 | MS.gene051791:intron | 40.0% | |
| CATCAGTTGACGTGGAAAAT+GGG | - | chr8.2:7022509-7022528 | MS.gene051791:intron | 40.0% | |
| CATGCTGAAGGAAAGAAACA+CGG | - | chr8.2:7022232-7022251 | MS.gene051791:intron | 40.0% | |
| CATGGTCTACATATCCTGTT+CGG | - | chr8.2:7021519-7021538 | MS.gene051791:intron | 40.0% | |
| CCACTTGAGAAGCTGAATTA+AGG | + | chr8.2:7020555-7020574 | None:intergenic | 40.0% | |
| CCCATGATTGTAATGATACG+AGG | + | chr8.2:7020706-7020725 | None:intergenic | 40.0% | |
| CCTTAATTCAGCTTCTCAAG+TGG | - | chr8.2:7020552-7020571 | MS.gene051791:CDS | 40.0% | |
| CGGTTCATGCAATCATAAAG+GGG | - | chr8.2:7021596-7021615 | MS.gene051791:intron | 40.0% | |
| CTGTCAAAGATGGCAAACAA+AGG | - | chr8.2:7021315-7021334 | MS.gene051791:intron | 40.0% | |
| CTTCTGTAATACACTGTGTG+TGG | + | chr8.2:7020074-7020093 | None:intergenic | 40.0% | |
| CTTGAGAAGCTGAATTAAGG+GGG | + | chr8.2:7020552-7020571 | None:intergenic | 40.0% | |
| CTTGTTCTCAACTGCAAAGT+TGG | + | chr8.2:7023056-7023075 | None:intergenic | 40.0% | |
| GAACAAGTATGTGCGATTAG+TGG | - | chr8.2:7023069-7023088 | MS.gene051791:CDS | 40.0% | |
| GGCATTCTAGTATCTACTGA+AGG | - | chr8.2:7020761-7020780 | MS.gene051791:CDS | 40.0% | |
| GGTTCAAGTGTAACAACCTA+GGG | + | chr8.2:7020320-7020339 | None:intergenic | 40.0% | |
| GGTTCATGCAATCATAAAGG+GGG | - | chr8.2:7021597-7021616 | MS.gene051791:intron | 40.0% | |
| TCGGAAGAAACTTCATTCAC+CGG | + | chr8.2:7022427-7022446 | None:intergenic | 40.0% | |
| TCGGAGAGAGTCATAGTTTA+AGG | - | chr8.2:7021053-7021072 | MS.gene051791:intron | 40.0% | |
| TCTACATATCCTGTTCGGAT+GGG | - | chr8.2:7021524-7021543 | MS.gene051791:intron | 40.0% | |
| TGAGTGTCAACTGCCAATAA+CGG | - | chr8.2:7022041-7022060 | MS.gene051791:intron | 40.0% | |
| TTGACTGCACTGTATTAGTC+TGG | - | chr8.2:7021082-7021101 | MS.gene051791:intron | 40.0% | |
| TTGAGAAGCTGAATTAAGGG+GGG | + | chr8.2:7020551-7020570 | None:intergenic | 40.0% | |
| ! | CAGGAAAAGTATGGTCCAAA+AGG | - | chr8.2:7021257-7021276 | MS.gene051791:intron | 40.0% |
| ! | CTTTGTTTGCCATCTTTGAC+AGG | + | chr8.2:7021317-7021336 | None:intergenic | 40.0% |
| ! | GAGATAGCTGGTGACTTTTA+AGG | - | chr8.2:7022710-7022729 | MS.gene051791:intron | 40.0% |
| ! | TAATTTTGCGCCTGATGCAA+AGG | - | chr8.2:7022306-7022325 | MS.gene051791:intron | 40.0% |
| !! | AAACTTCATTCACCGGTTTC+AGG | + | chr8.2:7022420-7022439 | None:intergenic | 40.0% |
| !! | GGAAAATGGGGAAGTATTTC+AGG | - | chr8.2:7022522-7022541 | MS.gene051791:intron | 40.0% |
| !!! | GCTGGGCCTTTTTTAACTTA+TGG | - | chr8.2:7021676-7021695 | MS.gene051791:intron | 40.0% |
| AAACGGGTACCTATCTGTTG+TGG | - | chr8.2:7020588-7020607 | MS.gene051791:CDS | 45.0% | |
| AACGGGTACCTATCTGTTGT+GGG | - | chr8.2:7020589-7020608 | MS.gene051791:CDS | 45.0% | |
| AACTCCATCCCACAACAGAT+AGG | + | chr8.2:7020600-7020619 | None:intergenic | 45.0% | |
| AAGTATGGTCCAAAAGGCCA+AGG | - | chr8.2:7021263-7021282 | MS.gene051791:intron | 45.0% | |
| ACAAGATCCTAGCCACATTG+AGG | + | chr8.2:7020648-7020667 | None:intergenic | 45.0% | |
| AGTCATTCCAAAAAGGCCCT+AGG | - | chr8.2:7020301-7020320 | MS.gene051791:intron | 45.0% | |
| ATATACCTACAGAACCACGG+AGG | + | chr8.2:7021377-7021396 | None:intergenic | 45.0% | |
| ATCCTGTTCGGATGGGAATT+GGG | - | chr8.2:7021531-7021550 | MS.gene051791:intron | 45.0% | |
| CAGGCGCAAAATTATCTGTC+TGG | + | chr8.2:7022300-7022319 | None:intergenic | 45.0% | |
| GAATGACACATCAGTTGACG+TGG | - | chr8.2:7022501-7022520 | MS.gene051791:intron | 45.0% | |
| GCACTTCTTCTACATGCTGA+AGG | - | chr8.2:7022220-7022239 | MS.gene051791:intron | 45.0% | |
| GTCTACATATCCTGTTCGGA+TGG | - | chr8.2:7021523-7021542 | MS.gene051791:intron | 45.0% | |
| TAGATTCCTGCAGTGCTTTG+AGG | + | chr8.2:7022870-7022889 | None:intergenic | 45.0% | |
| TATCCTGTTCGGATGGGAAT+TGG | - | chr8.2:7021530-7021549 | MS.gene051791:intron | 45.0% | |
| TCAGAAGACTCGTGCAACTT+TGG | + | chr8.2:7022388-7022407 | None:intergenic | 45.0% | |
| TGCAAGTCTCTTGTGGATCA+AGG | - | chr8.2:7021879-7021898 | MS.gene051791:intron | 45.0% | |
| TGCTGAAGGAAAGAAACACG+GGG | - | chr8.2:7022234-7022253 | MS.gene051791:intron | 45.0% | |
| TTGATCCACAAGAGACTTGC+AGG | + | chr8.2:7021880-7021899 | None:intergenic | 45.0% | |
| TTTGCCATCTTTGACAGGCT+TGG | + | chr8.2:7021312-7021331 | None:intergenic | 45.0% | |
| ! | ATTAGCCTGCAAGTCTCTTG+TGG | - | chr8.2:7021872-7021891 | MS.gene051791:intron | 45.0% |
| ! | GGAGACGGGTTCTAATGATA+TGG | - | chr8.2:7022336-7022355 | MS.gene051791:intron | 45.0% |
| ! | GTAACAACCTAGGGCCTTTT+TGG | + | chr8.2:7020311-7020330 | None:intergenic | 45.0% |
| ! | TACTCACTTCTAGAGGAGTC+TGG | - | chr8.2:7020486-7020505 | MS.gene051791:intron | 45.0% |
| ! | TGGTTTTCCTCAATGTGGCT+AGG | - | chr8.2:7020638-7020657 | MS.gene051791:CDS | 45.0% |
| CATGCAATCATAAAGGGGGC+AGG | - | chr8.2:7021601-7021620 | MS.gene051791:intron | 50.0% | |
| CTAGTGGTTGCTTCGAAGCA+TGG | + | chr8.2:7022276-7022295 | None:intergenic | 50.0% | |
| CTCAACTGCAAAGTTGGAGC+TGG | + | chr8.2:7023050-7023069 | None:intergenic | 50.0% | |
| GGTACCTATCTGTTGTGGGA+TGG | - | chr8.2:7020593-7020612 | MS.gene051791:CDS | 50.0% | |
| TCCACTGCATCCTTTGCATC+AGG | + | chr8.2:7022319-7022338 | None:intergenic | 50.0% | |
| TGCAAAGGATGCAGTGGAGA+CGG | - | chr8.2:7022321-7022340 | MS.gene051791:intron | 50.0% | |
| !! | AGTTGTCCTCAAAGCACTGC+AGG | - | chr8.2:7022861-7022880 | MS.gene051791:intron | 50.0% |
| !! | GGAAGTATTTCAGGGCGAGA+AGG | - | chr8.2:7022531-7022550 | MS.gene051791:intron | 50.0% |
| AGCCCAATTCCCATCCGAAC+AGG | + | chr8.2:7021536-7021555 | None:intergenic | 55.0% | |
| CTTCGAAGCATGGAACGCTC+GGG | + | chr8.2:7022266-7022285 | None:intergenic | 55.0% | |
| GCAAAGGATGCAGTGGAGAC+GGG | - | chr8.2:7022322-7022341 | MS.gene051791:intron | 55.0% | |
| GCCTGATGCAAAGGATGCAG+TGG | - | chr8.2:7022315-7022334 | MS.gene051791:intron | 55.0% | |
| GCTGCCAAGCCTGTCAAAGA+TGG | - | chr8.2:7021305-7021324 | MS.gene051791:intron | 55.0% | |
| GCTTCGAAGCATGGAACGCT+CGG | + | chr8.2:7022267-7022286 | None:intergenic | 55.0% | |
| TACTGGTGGCAGCATCCTGA+TGG | - | chr8.2:7022814-7022833 | MS.gene051791:intron | 55.0% | |
| ! | AACGTCCTCCGTGGTTCTGT+AGG | - | chr8.2:7021369-7021388 | MS.gene051791:intron | 55.0% |
| AGGGCGAGAAGGCAAGAGAG+AGG | - | chr8.2:7022542-7022561 | MS.gene051791:intron | 60.0% | |
| GAGCGAGGCGATTGAGCAGA+AGG | - | chr8.2:7022915-7022934 | MS.gene051791:intron | 60.0% | |
| GCTTAGCTGAACGTCCTCCG+TGG | - | chr8.2:7021360-7021379 | MS.gene051791:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 7020021 | 7023102 | 7020021 | ID=MS.gene051791 |
| chr8.2 | mRNA | 7020021 | 7023102 | 7020021 | ID=MS.gene051791.t1;Parent=MS.gene051791 |
| chr8.2 | exon | 7023028 | 7023102 | 7023028 | ID=MS.gene051791.t1.exon1;Parent=MS.gene051791.t1 |
| chr8.2 | CDS | 7023028 | 7023102 | 7023028 | ID=cds.MS.gene051791.t1;Parent=MS.gene051791.t1 |
| chr8.2 | exon | 7021733 | 7021863 | 7021733 | ID=MS.gene051791.t1.exon2;Parent=MS.gene051791.t1 |
| chr8.2 | CDS | 7021733 | 7021863 | 7021733 | ID=cds.MS.gene051791.t1;Parent=MS.gene051791.t1 |
| chr8.2 | exon | 7020517 | 7020934 | 7020517 | ID=MS.gene051791.t1.exon3;Parent=MS.gene051791.t1 |
| chr8.2 | CDS | 7020517 | 7020934 | 7020517 | ID=cds.MS.gene051791.t1;Parent=MS.gene051791.t1 |
| chr8.2 | exon | 7020187 | 7020297 | 7020187 | ID=MS.gene051791.t1.exon4;Parent=MS.gene051791.t1 |
| chr8.2 | CDS | 7020187 | 7020297 | 7020187 | ID=cds.MS.gene051791.t1;Parent=MS.gene051791.t1 |
| chr8.2 | exon | 7020021 | 7020083 | 7020021 | ID=MS.gene051791.t1.exon5;Parent=MS.gene051791.t1 |
| chr8.2 | CDS | 7020021 | 7020083 | 7020021 | ID=cds.MS.gene051791.t1;Parent=MS.gene051791.t1 |
| Gene Sequence |
| Protein sequence |
