Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77441.t1 | GAU46528.1 | 98.3 | 118 | 2 | 0 | 1 | 118 | 1 | 118 | 4.80E-55 | 224.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77441.t1 | P40590 | 98.3 | 115 | 2 | 0 | 1 | 115 | 1 | 115 | 3.7e-56 | 219.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77441.t1 | A0A2Z6NQE2 | 98.3 | 118 | 2 | 0 | 1 | 118 | 1 | 118 | 3.5e-55 | 224.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050320 | MS.gene77441 | 0.835086 | 2.06E-56 | -1.69E-46 |
| MS.gene050838 | MS.gene77441 | 0.845015 | 5.28E-59 | -1.69E-46 |
| MS.gene051746 | MS.gene77441 | 0.838364 | 3.00E-57 | -1.69E-46 |
| MS.gene051748 | MS.gene77441 | 0.841267 | 5.27E-58 | -1.69E-46 |
| MS.gene051850 | MS.gene77441 | 0.82224 | 2.63E-53 | -1.69E-46 |
| MS.gene051885 | MS.gene77441 | 0.814988 | 1.16E-51 | -1.69E-46 |
| MS.gene051903 | MS.gene77441 | 0.83124 | 1.87E-55 | -1.69E-46 |
| MS.gene052947 | MS.gene77441 | 0.84529 | 4.45E-59 | -1.69E-46 |
| MS.gene053109 | MS.gene77441 | 0.831741 | 1.41E-55 | -1.69E-46 |
| MS.gene053952 | MS.gene77441 | 0.820485 | 6.69E-53 | -1.69E-46 |
| MS.gene054403 | MS.gene77441 | 0.800251 | 1.57E-48 | -1.69E-46 |
| MS.gene055424 | MS.gene77441 | 0.820706 | 5.95E-53 | -1.69E-46 |
| MS.gene056075 | MS.gene77441 | 0.859345 | 4.41E-63 | -1.69E-46 |
| MS.gene057094 | MS.gene77441 | 0.846404 | 2.22E-59 | -1.69E-46 |
| MS.gene058074 | MS.gene77441 | 0.813124 | 3.00E-51 | -1.69E-46 |
| MS.gene059171 | MS.gene77441 | 0.814652 | 1.38E-51 | -1.69E-46 |
| MS.gene059726 | MS.gene77441 | 0.829891 | 3.99E-55 | -1.69E-46 |
| MS.gene06001 | MS.gene77441 | 0.833492 | 5.17E-56 | -1.69E-46 |
| MS.gene060574 | MS.gene77441 | 0.832142 | 1.12E-55 | -1.69E-46 |
| MS.gene061145 | MS.gene77441 | 0.809296 | 2.03E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77441.t1 | MTR_5g040570 | 97.458 | 118 | 3 | 0 | 1 | 118 | 1 | 118 | 1.67e-79 | 234 |
| MS.gene77441.t1 | MTR_7g010150 | 99.130 | 115 | 1 | 0 | 1 | 115 | 1 | 115 | 1.70e-78 | 231 |
| MS.gene77441.t1 | MTR_8g467460 | 99.130 | 115 | 1 | 0 | 1 | 115 | 1 | 115 | 3.01e-78 | 231 |
| MS.gene77441.t1 | MTR_7g011050 | 63.559 | 118 | 26 | 2 | 1 | 118 | 1 | 101 | 2.95e-42 | 139 |
| MS.gene77441.t1 | MTR_8g019410 | 46.903 | 113 | 22 | 2 | 4 | 115 | 47 | 122 | 1.25e-17 | 76.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77441.t1 | AT1G26880 | 93.103 | 116 | 8 | 0 | 1 | 116 | 1 | 116 | 2.48e-74 | 221 |
| MS.gene77441.t1 | AT1G69620 | 93.103 | 116 | 8 | 0 | 1 | 116 | 1 | 116 | 3.52e-74 | 221 |
| MS.gene77441.t1 | AT3G28900 | 90.435 | 115 | 11 | 0 | 1 | 115 | 1 | 115 | 4.08e-71 | 213 |
| MS.gene77441.t1 | AT1G26880 | 91.304 | 92 | 8 | 0 | 1 | 92 | 1 | 92 | 6.28e-57 | 176 |
Find 52 sgRNAs with CRISPR-Local
Find 406 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGGATCATTAGGGCTTTCT+TGG | 0.253359 | 5.1:-30764579 | MS.gene77441:CDS |
| ATCAATCTTGCAACATTTAC+CGG | 0.293367 | 5.1:+30760349 | None:intergenic |
| TGAATTCTCTTGCCAGTAAC+AGG | 0.301708 | 5.1:+30766401 | None:intergenic |
| TCTGGTTCTATAGGATCATT+AGG | 0.302724 | 5.1:-30764589 | MS.gene77441:intron |
| AACCCTGTGTTGGTTGGATT+TGG | 0.331681 | 5.1:+30766594 | None:intergenic |
| TTCACAGTCCTGCGGTTTCT+AGG | 0.351101 | 5.1:+30764742 | None:intergenic |
| GGACCTAAGTGTCCTGTTAC+TGG | 0.354989 | 5.1:-30766413 | MS.gene77441:CDS |
| AGAGCAAAAGATTGTGAAAA+AGG | 0.358157 | 5.1:-30764552 | MS.gene77441:CDS |
| TCTGGTAAAGTTGATTTAAC+CGG | 0.400224 | 5.1:-30760368 | MS.gene77441:CDS |
| AGGACTGTGAACCGTGCTTA+TGG | 0.432739 | 5.1:-30764730 | MS.gene77441:CDS |
| GGTCGTTATGGTCGATTCTC+TGG | 0.434817 | 5.1:-30760386 | MS.gene77441:CDS |
| ATAAGCATACAAACCTTTCC+CGG | 0.437755 | 5.1:+30764683 | None:intergenic |
| GATTCTTGTGCCTAAAATGA+AGG | 0.455127 | 5.1:-30760291 | MS.gene77441:CDS |
| AATTCAGAAGGCAAAGGAAA+AGG | 0.455813 | 5.1:-30764522 | MS.gene77441:intron |
| CTCTCGCAAGGACTTGTTTG+AGG | 0.462249 | 5.1:+30760523 | None:intergenic |
| GTTACTGGCAAGAGAATTCA+AGG | 0.469764 | 5.1:-30766398 | MS.gene77441:CDS |
| TTTGTCTGGAGGTGCTGTCC+GGG | 0.481029 | 5.1:-30764701 | MS.gene77441:CDS |
| CTGGAGGTGCTGTCCGGGAA+AGG | 0.484140 | 5.1:-30764696 | MS.gene77441:intron |
| TAAAATGAAGGAAGAGGAAG+AGG | 0.496269 | 5.1:-30760279 | MS.gene77441:CDS |
| CTGGTTCTATAGGATCATTA+GGG | 0.498453 | 5.1:-30764588 | MS.gene77441:intron |
| CTACAGAGTACAAGAGATCA+AGG | 0.501509 | 5.1:-30764768 | MS.gene77441:CDS |
| TTTGACAACCCTGTGTTGGT+TGG | 0.514440 | 5.1:+30766588 | None:intergenic |
| AACAAAGTAAGAGGTCGTTA+TGG | 0.523674 | 5.1:-30760398 | MS.gene77441:CDS |
| TAAATGTTGCAAGATTGATC+AGG | 0.528748 | 5.1:-30760345 | MS.gene77441:CDS |
| GAAACAAGTCTTTAGCAAGC+TGG | 0.531303 | 5.1:-30760553 | MS.gene77441:CDS |
| CAGATGCTAAACAAAGTAAG+AGG | 0.541988 | 5.1:-30760407 | MS.gene77441:CDS |
| CATCTTCCTTACAGCGTCCA+CGG | 0.543707 | 5.1:+30760466 | None:intergenic |
| TCAGGTTACAGCTGAGATGA+AGG | 0.548610 | 5.1:-30760327 | MS.gene77441:CDS |
| TTGCCAGTAACAGGACACTT+AGG | 0.549594 | 5.1:+30766410 | None:intergenic |
| CACAGGGTTGTCAAAACCCC+TGG | 0.556629 | 5.1:-30766580 | MS.gene77441:intron |
| TGTGCCTAAAATGAAGGAAG+AGG | 0.558094 | 5.1:-30760285 | MS.gene77441:CDS |
| CTTGATCTCTTGTACTCTGT+AGG | 0.561073 | 5.1:+30764769 | None:intergenic |
| CAACCAAATCCAACCAACAC+AGG | 0.569419 | 5.1:-30766597 | MS.gene77441:CDS |
| ACTACTAAGAAGAGAGCTAG+TGG | 0.569876 | 5.1:-30766434 | MS.gene77441:CDS |
| CTGTGAACCGTGCTTATGGT+GGG | 0.576307 | 5.1:-30764726 | MS.gene77441:CDS |
| ACTGTGAACCGTGCTTATGG+TGG | 0.577518 | 5.1:-30764727 | MS.gene77441:CDS |
| AATCCTCTGTCTCTCTCGCA+AGG | 0.590945 | 5.1:+30760511 | None:intergenic |
| AAAGGTCCTCAAAATTCAGA+AGG | 0.596465 | 5.1:-30764534 | MS.gene77441:CDS |
| AGGAAGAGGAAACTCATGAA+AGG | 0.598338 | 5.1:-30760265 | MS.gene77441:CDS |
| AATTGCAGATTCCACACTTG+AGG | 0.607246 | 5.1:-30764792 | MS.gene77441:intron |
| CAAGGCTGCCTAGAAACCGC+AGG | 0.608893 | 5.1:-30764750 | MS.gene77441:CDS |
| AGTCCTTGCGAGAGAGACAG+AGG | 0.613801 | 5.1:-30760514 | MS.gene77441:CDS |
| GTAGCTGTGACGACGGCGAT+AGG | 0.621925 | 5.1:+30766621 | None:intergenic |
| TACTCTGTAGGCCTCAAGTG+TGG | 0.623172 | 5.1:+30764781 | None:intergenic |
| CCTCAAAATTCAGAAGGCAA+AGG | 0.629318 | 5.1:-30764528 | MS.gene77441:CDS |
| AACCAAATCCAACCAACACA+GGG | 0.630763 | 5.1:-30766596 | MS.gene77441:CDS |
| TGTGAACCGTGCTTATGGTG+GGG | 0.634295 | 5.1:-30764725 | MS.gene77441:CDS |
| TGGTTGCGTAGCTGTGACGA+CGG | 0.639865 | 5.1:+30766614 | None:intergenic |
| ACAAAACCCCACCATAAGCA+CGG | 0.670068 | 5.1:+30764719 | None:intergenic |
| GGTTACAGCTGAGATGAAGG+AGG | 0.700251 | 5.1:-30760324 | MS.gene77441:CDS |
| CATCTCAATATGTATCTCCG+TGG | 0.704484 | 5.1:-30760483 | MS.gene77441:CDS |
| AAGCACGGTTCACAGTCCTG+CGG | 0.716531 | 5.1:+30764734 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAATAAAATAATAATTTTT+CGG | + | chr5.1:30765174-30765193 | None:intergenic | 0.0% |
| !! | CTATTAACTAATATTAATAA+TGG | + | chr5.1:30765347-30765366 | None:intergenic | 10.0% |
| !! | TAATATTAGTTAATAGTAAT+TGG | - | chr5.1:30765351-30765370 | MS.gene77441:intron | 10.0% |
| !!! | TACTTAAATTTTATTTCTTT+GGG | + | chr5.1:30763090-30763109 | None:intergenic | 10.0% |
| !!! | TATTAATTTATGATTTTCTT+GGG | - | chr5.1:30765125-30765144 | MS.gene77441:intron | 10.0% |
| !!! | TTATTAATTTATGATTTTCT+TGG | - | chr5.1:30765124-30765143 | MS.gene77441:intron | 10.0% |
| !! | AAGTATACATAAGAAATTAT+TGG | + | chr5.1:30762626-30762645 | None:intergenic | 15.0% |
| !! | ATTACTTAAAATGTAAATGT+TGG | - | chr5.1:30764462-30764481 | MS.gene77441:intron | 15.0% |
| !! | CAAGAAAAATGATAAAATTA+TGG | - | chr5.1:30761033-30761052 | MS.gene77441:intron | 15.0% |
| !! | TCTAAATTAATAAATTTCTC+CGG | + | chr5.1:30763991-30764010 | None:intergenic | 15.0% |
| !!! | AAACTCTTTAATTTAATACT+CGG | + | chr5.1:30765277-30765296 | None:intergenic | 15.0% |
| !!! | AACAATAAAACTTTTCTTTT+TGG | - | chr5.1:30762839-30762858 | MS.gene77441:intron | 15.0% |
| !!! | AGATATTGTGTATAATTTTA+GGG | + | chr5.1:30761226-30761245 | None:intergenic | 15.0% |
| !!! | AGTTTTTCAATTTTTTACAT+TGG | - | chr5.1:30765201-30765220 | MS.gene77441:intron | 15.0% |
| !!! | ATTTACATTTTAAGTAATCA+TGG | + | chr5.1:30764460-30764479 | None:intergenic | 15.0% |
| !!! | CATAATTTTATCATTTTTCT+TGG | + | chr5.1:30761035-30761054 | None:intergenic | 15.0% |
| !!! | GTACTTAAATTTTATTTCTT+TGG | + | chr5.1:30763091-30763110 | None:intergenic | 15.0% |
| !!! | TATTATATGTTTCTTACTTT+TGG | - | chr5.1:30761921-30761940 | MS.gene77441:intron | 15.0% |
| !!! | TTTATATTGTGACTATTTTT+AGG | - | chr5.1:30763051-30763070 | MS.gene77441:intron | 15.0% |
| !! | AAACATAAATAAGAACATAG+AGG | - | chr5.1:30765517-30765536 | MS.gene77441:intron | 20.0% |
| !! | AAATTGAAATTAACTTACCA+GGG | + | chr5.1:30760219-30760238 | None:intergenic | 20.0% |
| !! | AAATTTCCCGAAAAATAATT+CGG | + | chr5.1:30764068-30764087 | None:intergenic | 20.0% |
| !! | AATCAAGTAAAATTGTTAAC+TGG | + | chr5.1:30761478-30761497 | None:intergenic | 20.0% |
| !! | AATCTAATTATATTTGTCTC+TGG | - | chr5.1:30762172-30762191 | MS.gene77441:intron | 20.0% |
| !! | AATGATTAAACAGAGTTATT+GGG | + | chr5.1:30764283-30764302 | None:intergenic | 20.0% |
| !! | ATAACATTTAGCATTTATGT+TGG | + | chr5.1:30765718-30765737 | None:intergenic | 20.0% |
| !! | ATAATAAACCTAACACAATA+AGG | + | chr5.1:30765597-30765616 | None:intergenic | 20.0% |
| !! | CAAAACACGTTAAAATATTT+CGG | - | chr5.1:30761147-30761166 | MS.gene77441:intron | 20.0% |
| !! | CAACATAAAACTATAAACAA+TGG | + | chr5.1:30760554-30760573 | None:intergenic | 20.0% |
| !! | CTAAAATTATACACAATATC+TGG | - | chr5.1:30761225-30761244 | MS.gene77441:intron | 20.0% |
| !! | TAGAATTTCAAAAACTAAAC+TGG | + | chr5.1:30761585-30761604 | None:intergenic | 20.0% |
| !! | TCATTAGAATCTAATTATGA+TGG | - | chr5.1:30765639-30765658 | MS.gene77441:intron | 20.0% |
| !! | TGGTCATATATTAAAAAACA+TGG | + | chr5.1:30761458-30761477 | None:intergenic | 20.0% |
| !! | TGTTCATATAATAAGAAACA+TGG | + | chr5.1:30761688-30761707 | None:intergenic | 20.0% |
| !!! | AAATGAGATAACAATCTTTT+TGG | - | chr5.1:30762309-30762328 | MS.gene77441:intron | 20.0% |
| !!! | AACTAATATTAATAATGGAG+AGG | + | chr5.1:30765342-30765361 | None:intergenic | 20.0% |
| !!! | AATATTGATTAAAAATGCCA+AGG | + | chr5.1:30761434-30761453 | None:intergenic | 20.0% |
| !!! | AATTTGAAATGAAGCATTTA+GGG | + | chr5.1:30763436-30763455 | None:intergenic | 20.0% |
| !!! | AATTTGAAATGATTTGCAAT+TGG | - | chr5.1:30763280-30763299 | MS.gene77441:intron | 20.0% |
| !!! | AGCTTTTACATTTAATGATT+TGG | - | chr5.1:30762134-30762153 | MS.gene77441:intron | 20.0% |
| !!! | AGTTTGAAATAAACATCATA+CGG | + | chr5.1:30761000-30761019 | None:intergenic | 20.0% |
| !!! | ATATAAGACAATTCTTGTTT+AGG | - | chr5.1:30765566-30765585 | MS.gene77441:intron | 20.0% |
| !!! | CAGATATTGTGTATAATTTT+AGG | + | chr5.1:30761227-30761246 | None:intergenic | 20.0% |
| !!! | CGTTTATTTTTTTCATTGAT+TGG | - | chr5.1:30760415-30760434 | MS.gene77441:intron | 20.0% |
| !!! | GATTTGTTATGTTTTGAAAT+TGG | - | chr5.1:30760275-30760294 | MS.gene77441:CDS | 20.0% |
| !!! | TAGTTTTATGTTGTGATTTA+TGG | - | chr5.1:30760561-30760580 | MS.gene77441:CDS | 20.0% |
| !!! | TATTTGTGTTTTCTTTGATT+TGG | - | chr5.1:30765614-30765633 | MS.gene77441:intron | 20.0% |
| !!! | TCTAAAATAATAAATGTGTC+CGG | + | chr5.1:30765239-30765258 | None:intergenic | 20.0% |
| !!! | TTTTGAATTTTCTGGTTTAT+TGG | - | chr5.1:30762462-30762481 | MS.gene77441:intron | 20.0% |
| ! | AAAAGATTGGGTAATTAATC+AGG | + | chr5.1:30762970-30762989 | None:intergenic | 25.0% |
| ! | AAATCTCATACATCAATTGA+AGG | - | chr5.1:30764566-30764585 | MS.gene77441:CDS | 25.0% |
| ! | AATCCAATATCAAATACTCT+TGG | - | chr5.1:30765745-30765764 | MS.gene77441:intron | 25.0% |
| ! | AATCGTAACATCATAAATCA+AGG | + | chr5.1:30760485-30760504 | None:intergenic | 25.0% |
| ! | AATTCAAAACTGTATCACAA+TGG | + | chr5.1:30762451-30762470 | None:intergenic | 25.0% |
| ! | AATTGAAATTAACTTACCAG+GGG | + | chr5.1:30760218-30760237 | None:intergenic | 25.0% |
| ! | AATTTCCCGAAAAATAATTC+GGG | + | chr5.1:30764067-30764086 | None:intergenic | 25.0% |
| ! | ACAATACATAAACTTGATTC+TGG | + | chr5.1:30765682-30765701 | None:intergenic | 25.0% |
| ! | ATGATTAAACAGAGTTATTG+GGG | + | chr5.1:30764282-30764301 | None:intergenic | 25.0% |
| ! | ATTACATGAGAAGAGAAATT+TGG | + | chr5.1:30766077-30766096 | None:intergenic | 25.0% |
| ! | CAATAAGACACAATTAACAT+AGG | + | chr5.1:30762392-30762411 | None:intergenic | 25.0% |
| ! | CAATACATAAACTTGATTCT+GGG | + | chr5.1:30765681-30765700 | None:intergenic | 25.0% |
| ! | CTATGTTAATTGTGTCTTAT+TGG | - | chr5.1:30762390-30762409 | MS.gene77441:intron | 25.0% |
| ! | CTCTATAAATTAATAGTGTC+AGG | - | chr5.1:30763964-30763983 | MS.gene77441:intron | 25.0% |
| ! | GAAATTGAAATTAACTTACC+AGG | + | chr5.1:30760220-30760239 | None:intergenic | 25.0% |
| ! | GAATGATTAAACAGAGTTAT+TGG | + | chr5.1:30764284-30764303 | None:intergenic | 25.0% |
| ! | GTAAAAACAGTAAGTTTACA+AGG | + | chr5.1:30763692-30763711 | None:intergenic | 25.0% |
| ! | TCTTAGACTTCATAAACAAT+AGG | - | chr5.1:30763634-30763653 | MS.gene77441:intron | 25.0% |
| ! | TTAAAGCAGAACAATAATGA+TGG | - | chr5.1:30763829-30763848 | MS.gene77441:intron | 25.0% |
| ! | TTACATGAGAAGAGAAATTT+GGG | + | chr5.1:30766076-30766095 | None:intergenic | 25.0% |
| !! | AAGATTGTTATCTCATTTTG+TGG | + | chr5.1:30762307-30762326 | None:intergenic | 25.0% |
| !! | AATAATGGAGAGGAATTAAA+GGG | + | chr5.1:30765332-30765351 | None:intergenic | 25.0% |
| !! | ACTACTCTTAAACTTTTATG+TGG | + | chr5.1:30763885-30763904 | None:intergenic | 25.0% |
| !! | ATTTGAAATGAAGCATTTAG+GGG | + | chr5.1:30763435-30763454 | None:intergenic | 25.0% |
| !! | CTTAATTTTGTTCCAAGTTA+AGG | + | chr5.1:30761634-30761653 | None:intergenic | 25.0% |
| !! | GAATTTGAAATGAAGCATTT+AGG | + | chr5.1:30763437-30763456 | None:intergenic | 25.0% |
| !! | TAATAATGGAGAGGAATTAA+AGG | + | chr5.1:30765333-30765352 | None:intergenic | 25.0% |
| !! | TGATTAATTACCCAATCTTT+TGG | - | chr5.1:30762969-30762988 | MS.gene77441:intron | 25.0% |
| !! | TTGCTTTGTTATAGAATGTT+TGG | - | chr5.1:30761744-30761763 | MS.gene77441:intron | 25.0% |
| !!! | AATATTTTAACGTGTTTTGG+AGG | + | chr5.1:30761146-30761165 | None:intergenic | 25.0% |
| !!! | ACCACATTTACAAGTTTTAA+AGG | + | chr5.1:30760688-30760707 | None:intergenic | 25.0% |
| !!! | ACCTTTAAAACTTGTAAATG+TGG | - | chr5.1:30760684-30760703 | MS.gene77441:intron | 25.0% |
| !!! | ATATGTCCCGAATTATTTTT+CGG | - | chr5.1:30764058-30764077 | MS.gene77441:intron | 25.0% |
| !!! | ATGTTGTTTTCTCTGTTTTT+AGG | - | chr5.1:30766617-30766636 | MS.gene77441:CDS | 25.0% |
| !!! | ATTGTTTTGTAGTTTTTTGC+TGG | - | chr5.1:30762675-30762694 | MS.gene77441:intron | 25.0% |
| !!! | ATTTGTTTTCCTGATTTGAT+TGG | + | chr5.1:30765543-30765562 | None:intergenic | 25.0% |
| !!! | ATTTTGTGTTGTTGAAATGT+AGG | - | chr5.1:30760303-30760322 | MS.gene77441:CDS | 25.0% |
| !!! | CGAAATATTTTAACGTGTTT+TGG | + | chr5.1:30761149-30761168 | None:intergenic | 25.0% |
| !!! | GGTATTTTAGTTTTTCTACA+AGG | + | chr5.1:30762949-30762968 | None:intergenic | 25.0% |
| !!! | TAATGATTTGGTTTAATTGC+TGG | - | chr5.1:30762146-30762165 | MS.gene77441:intron | 25.0% |
| !!! | TATACTTTTTATCTCCCTTT+AGG | + | chr5.1:30765496-30765515 | None:intergenic | 25.0% |
| !!! | TGATACAGTTTTGAATTTTC+TGG | - | chr5.1:30762454-30762473 | MS.gene77441:intron | 25.0% |
| !!! | TGGTTATTTTCTAAGTCTAA+CGG | - | chr5.1:30762538-30762557 | MS.gene77441:intron | 25.0% |
| !!! | TTTCCAAGAGTATTTGATAT+TGG | + | chr5.1:30765751-30765770 | None:intergenic | 25.0% |
| AAAATACTCTATTCTTCCAC+TGG | - | chr5.1:30762797-30762816 | MS.gene77441:intron | 30.0% | |
| AAATAGTAGAGTGATATGGA+GGG | - | chr5.1:30764613-30764632 | MS.gene77441:intron | 30.0% | |
| AACTCTGTTTAATCATTCCA+TGG | - | chr5.1:30764286-30764305 | MS.gene77441:intron | 30.0% | |
| ACTGTACATACCAAACAAAA+AGG | - | chr5.1:30764921-30764940 | MS.gene77441:intron | 30.0% | |
| AGAGCAAAAGATTGTGAAAA+AGG | - | chr5.1:30762227-30762246 | MS.gene77441:intron | 30.0% | |
| AGATGAAAAAAATCCTCATG+AGG | + | chr5.1:30763663-30763682 | None:intergenic | 30.0% | |
| AGGTTTGTATGCTTATCTTA+CGG | - | chr5.1:30762103-30762122 | MS.gene77441:intron | 30.0% | |
| AGTTCTTATGAAGTTTGGAA+CGG | + | chr5.1:30763329-30763348 | None:intergenic | 30.0% | |
| ATCAATCTTGCAACATTTAC+CGG | + | chr5.1:30766433-30766452 | None:intergenic | 30.0% | |
| ATGTTGGAATTCACTACTTT+CGG | - | chr5.1:30764478-30764497 | MS.gene77441:intron | 30.0% | |
| ATGTTGTGATTTATGGTAAC+TGG | - | chr5.1:30760568-30760587 | MS.gene77441:CDS | 30.0% | |
| CAAAGGAGATAAAAAGTGAT+GGG | + | chr5.1:30765976-30765995 | None:intergenic | 30.0% | |
| CATACATCAATTGAAGGAAT+GGG | - | chr5.1:30764572-30764591 | MS.gene77441:CDS | 30.0% | |
| GACTTAGAAAATAACCACAA+AGG | + | chr5.1:30762535-30762554 | None:intergenic | 30.0% | |
| GAGAAAGTTCTTATGAAGTT+TGG | + | chr5.1:30763334-30763353 | None:intergenic | 30.0% | |
| GATACAGTTCATGACAATTT+AGG | - | chr5.1:30760758-30760777 | MS.gene77441:intron | 30.0% | |
| GTACACACAACTATAATGTT+TGG | - | chr5.1:30763562-30763581 | MS.gene77441:intron | 30.0% | |
| GTGTGTATTTATGAGTTACA+AGG | - | chr5.1:30764095-30764114 | MS.gene77441:intron | 30.0% | |
| TAAATGTTGCAAGATTGATC+AGG | - | chr5.1:30766434-30766453 | MS.gene77441:CDS | 30.0% | |
| TAAATTAATAGTGTCAGGAC+CGG | - | chr5.1:30763969-30763988 | MS.gene77441:intron | 30.0% | |
| TAACAACACTCCAAAAGATT+GGG | + | chr5.1:30762982-30763001 | None:intergenic | 30.0% | |
| TACATGAGAAAATCAGAAGT+TGG | + | chr5.1:30763545-30763564 | None:intergenic | 30.0% | |
| TACATGAGAAGAGAAATTTG+GGG | + | chr5.1:30766075-30766094 | None:intergenic | 30.0% | |
| TCATACATCAATTGAAGGAA+TGG | - | chr5.1:30764571-30764590 | MS.gene77441:CDS | 30.0% | |
| TGAGCAATTGATATTTACCA+AGG | + | chr5.1:30761264-30761283 | None:intergenic | 30.0% | |
| TGATTAAAAATGCCAAGGTT+GGG | + | chr5.1:30761429-30761448 | None:intergenic | 30.0% | |
| TGGTAAATATCAATTGCTCA+TGG | - | chr5.1:30761264-30761283 | MS.gene77441:intron | 30.0% | |
| TGTGAAATAGTAGAGTGATA+TGG | - | chr5.1:30764609-30764628 | MS.gene77441:intron | 30.0% | |
| TTAACAACACTCCAAAAGAT+TGG | + | chr5.1:30762983-30763002 | None:intergenic | 30.0% | |
| TTCGGATTATAAAATCCGAA+CGG | - | chr5.1:30761101-30761120 | MS.gene77441:intron | 30.0% | |
| TTGATGGGGATATTTATTTG+AGG | + | chr5.1:30765849-30765868 | None:intergenic | 30.0% | |
| TTGATTAAAAATGCCAAGGT+TGG | + | chr5.1:30761430-30761449 | None:intergenic | 30.0% | |
| TTGCAAGCTCAAATAATCAT+AGG | + | chr5.1:30761951-30761970 | None:intergenic | 30.0% | |
| TTGGGACCGAAAATTATAAA+GGG | - | chr5.1:30765143-30765162 | MS.gene77441:intron | 30.0% | |
| TTTATAATCCGAACTGCATA+GGG | + | chr5.1:30761094-30761113 | None:intergenic | 30.0% | |
| ! | ATAGTAAAAAAGCATGTCAG+AGG | + | chr5.1:30761895-30761914 | None:intergenic | 30.0% |
| ! | CTCACTCTCTTTTCTTATAT+TGG | - | chr5.1:30766198-30766217 | MS.gene77441:intron | 30.0% |
| ! | GGAGATCCCTTTATAATTTT+CGG | + | chr5.1:30765152-30765171 | None:intergenic | 30.0% |
| ! | TCTGGTAAAGTTGATTTAAC+CGG | - | chr5.1:30766411-30766430 | MS.gene77441:CDS | 30.0% |
| ! | TTTTATAATCCGAACTGCAT+AGG | + | chr5.1:30761095-30761114 | None:intergenic | 30.0% |
| !! | AATCTTTTTGGAAGACTCTT+AGG | - | chr5.1:30762321-30762340 | MS.gene77441:intron | 30.0% |
| !! | AATTAAAGGTACTACTGGTA+AGG | + | chr5.1:30762506-30762525 | None:intergenic | 30.0% |
| !! | ATATTTGTCTCTGGTTCTAT+AGG | - | chr5.1:30762181-30762200 | MS.gene77441:intron | 30.0% |
| !! | GACTAATTTGCCTTTTTGTT+TGG | + | chr5.1:30764934-30764953 | None:intergenic | 30.0% |
| !! | GCTTAAATTAAAGGTACTAC+TGG | + | chr5.1:30762511-30762530 | None:intergenic | 30.0% |
| !! | TATGTCCCGAATTATTTTTC+GGG | - | chr5.1:30764059-30764078 | MS.gene77441:intron | 30.0% |
| !! | TGTTGATTTCCAATGAAGTA+AGG | - | chr5.1:30763480-30763499 | MS.gene77441:intron | 30.0% |
| !!! | CTTCTATGCTATTTTTTGTG+TGG | + | chr5.1:30764382-30764401 | None:intergenic | 30.0% |
| !!! | GTTGTTTTTGTAAGCTATCT+TGG | + | chr5.1:30760835-30760854 | None:intergenic | 30.0% |
| !!! | TCTCTGTTTTTAGGTTTTGA+CGG | - | chr5.1:30766626-30766645 | MS.gene77441:CDS | 30.0% |
| AAACAAGACCACAACATTAG+AGG | - | chr5.1:30762758-30762777 | MS.gene77441:intron | 35.0% | |
| AAACATCATACGGACAATCT+AGG | + | chr5.1:30760990-30761009 | None:intergenic | 35.0% | |
| AAAGGTCCTCAAAATTCAGA+AGG | - | chr5.1:30762245-30762264 | MS.gene77441:intron | 35.0% | |
| AACAAAGTAAGAGGTCGTTA+TGG | - | chr5.1:30766381-30766400 | MS.gene77441:intron | 35.0% | |
| AACAGCATTCATAATTCCAG+TGG | + | chr5.1:30762816-30762835 | None:intergenic | 35.0% | |
| AAGGAATGGGCAATTTACAA+AGG | - | chr5.1:30764585-30764604 | MS.gene77441:intron | 35.0% | |
| AATCAATCGTGGGTACAAAA+GGG | - | chr5.1:30764543-30764562 | MS.gene77441:CDS | 35.0% | |
| AATCATGGTAACATGCATGA+AGG | + | chr5.1:30764445-30764464 | None:intergenic | 35.0% | |
| AATTCAGAAGGCAAAGGAAA+AGG | - | chr5.1:30762257-30762276 | MS.gene77441:intron | 35.0% | |
| ACAAAAAGAAAGGGAAAGGT+GGG | - | chr5.1:30764674-30764693 | MS.gene77441:intron | 35.0% | |
| ACATCATCAAAATGCAGAAG+CGG | - | chr5.1:30763710-30763729 | MS.gene77441:intron | 35.0% | |
| ACTACTGTGTTCATTTGCAT+TGG | - | chr5.1:30765008-30765027 | MS.gene77441:intron | 35.0% | |
| ACTTCCTGGACAAAAAGAAA+GGG | - | chr5.1:30764665-30764684 | MS.gene77441:intron | 35.0% | |
| ATAAGCATACAAACCTTTCC+CGG | + | chr5.1:30762099-30762118 | None:intergenic | 35.0% | |
| ATATCAATTGCTCATGGCAT+TGG | - | chr5.1:30761270-30761289 | MS.gene77441:intron | 35.0% | |
| ATGAGAAGAAAAAACCAGAG+AGG | - | chr5.1:30765466-30765485 | MS.gene77441:intron | 35.0% | |
| ATGCTAGGTCTTAAGAACAA+AGG | + | chr5.1:30763182-30763201 | None:intergenic | 35.0% | |
| ATTCAATCACTGTATGCTTC+TGG | + | chr5.1:30763931-30763950 | None:intergenic | 35.0% | |
| CAGATGCTAAACAAAGTAAG+AGG | - | chr5.1:30766372-30766391 | MS.gene77441:intron | 35.0% | |
| CATAACCACATGTATACCTT+TGG | - | chr5.1:30763771-30763790 | MS.gene77441:intron | 35.0% | |
| CCAAAACTGTAATCAATCGT+GGG | - | chr5.1:30764533-30764552 | MS.gene77441:CDS | 35.0% | |
| CCAATACTTCTCATTTGATC+TGG | - | chr5.1:30762918-30762937 | MS.gene77441:intron | 35.0% | |
| CTAATTTACGTTGAGTTCCA+AGG | + | chr5.1:30764986-30765005 | None:intergenic | 35.0% | |
| CTTGGGACCGAAAATTATAA+AGG | - | chr5.1:30765142-30765161 | MS.gene77441:intron | 35.0% | |
| GAAATAGTAGAGTGATATGG+AGG | - | chr5.1:30764612-30764631 | MS.gene77441:intron | 35.0% | |
| GAATAGAAGTAAGTGACCAA+AGG | + | chr5.1:30763790-30763809 | None:intergenic | 35.0% | |
| GATTCTTGTGCCTAAAATGA+AGG | - | chr5.1:30766488-30766507 | MS.gene77441:intron | 35.0% | |
| GCAAAGGAGATAAAAAGTGA+TGG | + | chr5.1:30765977-30765996 | None:intergenic | 35.0% | |
| GGAAGATGTGAAGATATTTG+TGG | - | chr5.1:30766328-30766347 | MS.gene77441:intron | 35.0% | |
| GGTTTGTATGCTTATCTTAC+GGG | - | chr5.1:30762104-30762123 | MS.gene77441:intron | 35.0% | |
| GTGCAGTAAATGTAAACAAG+AGG | - | chr5.1:30765052-30765071 | MS.gene77441:intron | 35.0% | |
| TAAAATGAAGGAAGAGGAAG+AGG | - | chr5.1:30766500-30766519 | MS.gene77441:intron | 35.0% | |
| TAATCAATCGTGGGTACAAA+AGG | - | chr5.1:30764542-30764561 | MS.gene77441:CDS | 35.0% | |
| TATACCTTGAAGCCTTAACT+TGG | - | chr5.1:30761619-30761638 | MS.gene77441:intron | 35.0% | |
| TATTTGAGGAAGAGAGTGAA+TGG | + | chr5.1:30765835-30765854 | None:intergenic | 35.0% | |
| TCATACATACAATCACCTCA+AGG | + | chr5.1:30763259-30763278 | None:intergenic | 35.0% | |
| TCTGTTTAATCATTCCATGG+CGG | - | chr5.1:30764289-30764308 | MS.gene77441:intron | 35.0% | |
| TGTATCCAATGGTTTATTCG+AGG | + | chr5.1:30763218-30763237 | None:intergenic | 35.0% | |
| TTTGACAGAAGCCATTGAAA+AGG | + | chr5.1:30765911-30765930 | None:intergenic | 35.0% | |
| TTTGGGTCAGTTGTGAATAT+GGG | + | chr5.1:30764233-30764252 | None:intergenic | 35.0% | |
| ! | CAACGATGTGATTTTTGTCA+AGG | - | chr5.1:30766548-30766567 | MS.gene77441:intron | 35.0% |
| ! | CCACGATTGATTACAGTTTT+GGG | + | chr5.1:30764535-30764554 | None:intergenic | 35.0% |
| ! | CCAGATCAAATGAGAAGTAT+TGG | + | chr5.1:30762921-30762940 | None:intergenic | 35.0% |
| ! | CGGATTTTACAAACTGAACA+GGG | - | chr5.1:30761167-30761186 | MS.gene77441:intron | 35.0% |
| ! | CTTTAATTTAAGCGCCTTTG+TGG | - | chr5.1:30762518-30762537 | MS.gene77441:intron | 35.0% |
| ! | GATAAAAAGTGATGGGATGA+AGG | + | chr5.1:30765969-30765988 | None:intergenic | 35.0% |
| ! | GTGTGAAACTTTGAAGGAAA+GGG | - | chr5.1:30764635-30764654 | MS.gene77441:intron | 35.0% |
| ! | TCGGATTTTACAAACTGAAC+AGG | - | chr5.1:30761166-30761185 | MS.gene77441:intron | 35.0% |
| ! | TCTTCCTCTTCCTTCATTTT+AGG | + | chr5.1:30766501-30766520 | None:intergenic | 35.0% |
| ! | TGAATATGGGTTGTCTAGAT+GGG | + | chr5.1:30764220-30764239 | None:intergenic | 35.0% |
| ! | TTGGTGAATTTGGTGAGTAT+AGG | - | chr5.1:30763013-30763032 | MS.gene77441:intron | 35.0% |
| ! | TTGTGTTGTTGAAATGTAGG+TGG | - | chr5.1:30760306-30760325 | MS.gene77441:CDS | 35.0% |
| ! | TTTCCTCCAAGGCATAATTT+TGG | - | chr5.1:30762280-30762299 | MS.gene77441:intron | 35.0% |
| ! | TTTTGTAAGCTATCTTGGAG+AGG | + | chr5.1:30760830-30760849 | None:intergenic | 35.0% |
| !! | CACAAAGGCGCTTAAATTAA+AGG | + | chr5.1:30762520-30762539 | None:intergenic | 35.0% |
| !! | CTGGTTCTATAGGATCATTA+GGG | - | chr5.1:30762191-30762210 | MS.gene77441:intron | 35.0% |
| !! | TCTGGTTCTATAGGATCATT+AGG | - | chr5.1:30762190-30762209 | MS.gene77441:intron | 35.0% |
| !! | TGTTGTGGTCTTGTTTATGT+TGG | + | chr5.1:30762754-30762773 | None:intergenic | 35.0% |
| !! | TTTTGGGAAGATGTGGTTTT+TGG | + | chr5.1:30764519-30764538 | None:intergenic | 35.0% |
| !!! | ATTACAGTTTTGGGAAGATG+TGG | + | chr5.1:30764526-30764545 | None:intergenic | 35.0% |
| !!! | CTATTTTTTGTGTGGAACGA+AGG | + | chr5.1:30764374-30764393 | None:intergenic | 35.0% |
| !!! | GTGTTTTGGAGGATTTTACA+GGG | + | chr5.1:30761135-30761154 | None:intergenic | 35.0% |
| !!! | TTTTTTACATTGGCCCAAGT+CGG | - | chr5.1:30765211-30765230 | MS.gene77441:intron | 35.0% |
| AAACAGAGCCTGTGAATGTT+TGG | - | chr5.1:30760958-30760977 | MS.gene77441:intron | 40.0% | |
| AAACATTCACAGGCTCTGTT+TGG | + | chr5.1:30760959-30760978 | None:intergenic | 40.0% | |
| AAAGGAAAAGGTTTCCTCCA+AGG | - | chr5.1:30762269-30762288 | MS.gene77441:intron | 40.0% | |
| AACCAAATCCAACCAACACA+GGG | - | chr5.1:30760183-30760202 | MS.gene77441:intron | 40.0% | |
| AATCACCTCAAGGTCTAACT+TGG | + | chr5.1:30763249-30763268 | None:intergenic | 40.0% | |
| AATGCTCTTGTTCTGACTAC+TGG | + | chr5.1:30765382-30765401 | None:intergenic | 40.0% | |
| AATGGCTTCCAGACTTTACT+TGG | + | chr5.1:30765817-30765836 | None:intergenic | 40.0% | |
| AATTATGTTGCAGCGAACCT+TGG | - | chr5.1:30764966-30764985 | MS.gene77441:intron | 40.0% | |
| AATTGCAGATTCCACACTTG+AGG | - | chr5.1:30761987-30762006 | MS.gene77441:intron | 40.0% | |
| ACAACATACAACATGTGCCT+TGG | - | chr5.1:30762589-30762608 | MS.gene77441:intron | 40.0% | |
| ACATAGAGGCCAATCAAATC+AGG | - | chr5.1:30765531-30765550 | MS.gene77441:intron | 40.0% | |
| ACTAACTTGAGAGAGAATCC+CGG | - | chr5.1:30764745-30764764 | MS.gene77441:CDS | 40.0% | |
| ACTAATAGGGTGGGAAAAGA+AGG | + | chr5.1:30761061-30761080 | None:intergenic | 40.0% | |
| ACTACTAAGAAGAGAGCTAG+TGG | - | chr5.1:30760345-30760364 | MS.gene77441:CDS | 40.0% | |
| AGCCAGCATATGATTGTTCA+CGG | + | chr5.1:30761802-30761821 | None:intergenic | 40.0% | |
| AGGAAGAGGAAACTCATGAA+AGG | - | chr5.1:30766514-30766533 | MS.gene77441:intron | 40.0% | |
| AGGGGATTCCAAAATACCAT+TGG | + | chr5.1:30763417-30763436 | None:intergenic | 40.0% | |
| ATCCGTGAACAATCATATGC+TGG | - | chr5.1:30761797-30761816 | MS.gene77441:intron | 40.0% | |
| ATGGCTTCCAGACTTTACTT+GGG | + | chr5.1:30765816-30765835 | None:intergenic | 40.0% | |
| ATTAGAATAATCCACCGCCA+TGG | + | chr5.1:30764306-30764325 | None:intergenic | 40.0% | |
| CAAAGAGCGGTAAATGGAAA+AGG | + | chr5.1:30766007-30766026 | None:intergenic | 40.0% | |
| CACTTCCTGGACAAAAAGAA+AGG | - | chr5.1:30764664-30764683 | MS.gene77441:intron | 40.0% | |
| CAGAAGCCATTGAAAAGGTA+AGG | + | chr5.1:30765906-30765925 | None:intergenic | 40.0% | |
| CATCTCAATATGTATCTCCG+TGG | - | chr5.1:30766296-30766315 | MS.gene77441:intron | 40.0% | |
| CCCAAAACTGTAATCAATCG+TGG | - | chr5.1:30764532-30764551 | MS.gene77441:CDS | 40.0% | |
| CCTAGTTAACTGTACAGGAT+AGG | + | chr5.1:30761399-30761418 | None:intergenic | 40.0% | |
| CCTATCCTGTACAGTTAACT+AGG | - | chr5.1:30761396-30761415 | MS.gene77441:intron | 40.0% | |
| CCTCAAAATTCAGAAGGCAA+AGG | - | chr5.1:30762251-30762270 | MS.gene77441:intron | 40.0% | |
| CCTTCTGATATTAATCGCCA+CGG | - | chr5.1:30763391-30763410 | MS.gene77441:intron | 40.0% | |
| CTACAGAGTACAAGAGATCA+AGG | - | chr5.1:30762011-30762030 | MS.gene77441:intron | 40.0% | |
| CTGGACAAAAAGAAAGGGAA+AGG | - | chr5.1:30764670-30764689 | MS.gene77441:intron | 40.0% | |
| CTTGACCTAGTTAACTGTAC+AGG | + | chr5.1:30761404-30761423 | None:intergenic | 40.0% | |
| CTTGATCTCTTGTACTCTGT+AGG | + | chr5.1:30762013-30762032 | None:intergenic | 40.0% | |
| CTTGTTCTCTTCCATTGTCT+TGG | - | chr5.1:30761499-30761518 | MS.gene77441:intron | 40.0% | |
| CTTTGGGTCAGTTGTGAATA+TGG | + | chr5.1:30764234-30764253 | None:intergenic | 40.0% | |
| GAAACAAGTCTTTAGCAAGC+TGG | - | chr5.1:30766226-30766245 | MS.gene77441:intron | 40.0% | |
| GACAAAAAGAAAGGGAAAGG+TGG | - | chr5.1:30764673-30764692 | MS.gene77441:intron | 40.0% | |
| GACCTAGCATATGCCAAATT+AGG | - | chr5.1:30763192-30763211 | MS.gene77441:intron | 40.0% | |
| GAGAGGAATTAAAGGGTAAG+AGG | + | chr5.1:30765325-30765344 | None:intergenic | 40.0% | |
| GGTAAATGGAAAAGGCGAAA+GGG | + | chr5.1:30765999-30766018 | None:intergenic | 40.0% | |
| GGTGTATGGTTATTTGAGCT+TGG | - | chr5.1:30761529-30761548 | MS.gene77441:intron | 40.0% | |
| GGTTTATTCGAGGCCTAATT+TGG | + | chr5.1:30763208-30763227 | None:intergenic | 40.0% | |
| GTTACTGGCAAGAGAATTCA+AGG | - | chr5.1:30760381-30760400 | MS.gene77441:CDS | 40.0% | |
| TAGGATCATTAGGGCTTTCT+TGG | - | chr5.1:30762200-30762219 | MS.gene77441:intron | 40.0% | |
| TCTCTTCCATTGTCTTGGAA+TGG | - | chr5.1:30761504-30761523 | MS.gene77441:intron | 40.0% | |
| TGAATTCTCTTGCCAGTAAC+AGG | + | chr5.1:30760381-30760400 | None:intergenic | 40.0% | |
| TGACATGCTCCTTACTTCAT+TGG | + | chr5.1:30763492-30763511 | None:intergenic | 40.0% | |
| TGAGTATAGGTGAAAGTGAG+AGG | - | chr5.1:30763026-30763045 | MS.gene77441:intron | 40.0% | |
| TGGGGTAGTATTTATAGCGA+TGG | + | chr5.1:30764201-30764220 | None:intergenic | 40.0% | |
| TGGTAAGGTACAGTAACACA+AGG | + | chr5.1:30762491-30762510 | None:intergenic | 40.0% | |
| TGTGCCTAAAATGAAGGAAG+AGG | - | chr5.1:30766494-30766513 | MS.gene77441:intron | 40.0% | |
| TGTGGTCCAAAATTATGCCT+TGG | + | chr5.1:30762289-30762308 | None:intergenic | 40.0% | |
| TGTTCCAAGTTAAGGCTTCA+AGG | + | chr5.1:30761626-30761645 | None:intergenic | 40.0% | |
| TTAGGCCTCGAATAAACCAT+TGG | - | chr5.1:30763210-30763229 | MS.gene77441:intron | 40.0% | |
| TTCCATTGTCTTGGAATGGT+TGG | - | chr5.1:30761508-30761527 | MS.gene77441:intron | 40.0% | |
| TTTGCAATTGGCGTTGCAAT+TGG | - | chr5.1:30763292-30763311 | MS.gene77441:intron | 40.0% | |
| ! | AATGTGTGTCACTGCTATCT+TGG | - | chr5.1:30760505-30760524 | MS.gene77441:CDS | 40.0% |
| ! | AGTGACCAAAGGTATACATG+TGG | + | chr5.1:30763779-30763798 | None:intergenic | 40.0% |
| ! | CCCACGATTGATTACAGTTT+TGG | + | chr5.1:30764536-30764555 | None:intergenic | 40.0% |
| ! | CCTTTGCCTTCTGAATTTTG+AGG | + | chr5.1:30762254-30762273 | None:intergenic | 40.0% |
| ! | CTTTCCCTTTCTTTTTGTCC+AGG | + | chr5.1:30764672-30764691 | None:intergenic | 40.0% |
| ! | GAATATGGGTTGTCTAGATG+GGG | + | chr5.1:30764219-30764238 | None:intergenic | 40.0% |
| ! | GGCAATCCTTACCTTTTCAA+TGG | - | chr5.1:30765897-30765916 | MS.gene77441:intron | 40.0% |
| ! | GGTGTGAAACTTTGAAGGAA+AGG | - | chr5.1:30764634-30764653 | MS.gene77441:intron | 40.0% |
| ! | GTGAATATGGGTTGTCTAGA+TGG | + | chr5.1:30764221-30764240 | None:intergenic | 40.0% |
| ! | TGGAAGCATGATGTATCCAA+TGG | + | chr5.1:30763229-30763248 | None:intergenic | 40.0% |
| ! | TTTTTACATTGGCCCAAGTC+GGG | - | chr5.1:30765212-30765231 | MS.gene77441:intron | 40.0% |
| !! | ACAAAGGAGAGTGTTGAGTT+TGG | + | chr5.1:30763166-30763185 | None:intergenic | 40.0% |
| !! | AGGAACAGCCTTATTGTGTT+AGG | - | chr5.1:30765586-30765605 | MS.gene77441:intron | 40.0% |
| !! | ATGGTGATGGTGATGTCTTT+GGG | + | chr5.1:30764250-30764269 | None:intergenic | 40.0% |
| !! | GCAAAGAAGAGTGTTGTGTT+TGG | + | chr5.1:30763144-30763163 | None:intergenic | 40.0% |
| !! | TATTGGCTCAACATTCACCA+AGG | + | chr5.1:30762609-30762628 | None:intergenic | 40.0% |
| !!! | CGTGTTTTGGAGGATTTTAC+AGG | + | chr5.1:30761136-30761155 | None:intergenic | 40.0% |
| AAAAAGAGCCACGTCACTCT+CGG | - | chr5.1:30764823-30764842 | MS.gene77441:intron | 45.0% | |
| AAACAATAGGCTGCCTCATG+AGG | - | chr5.1:30763647-30763666 | MS.gene77441:intron | 45.0% | |
| AACCAGAGAGGAAGTCCTAA+AGG | - | chr5.1:30765478-30765497 | MS.gene77441:intron | 45.0% | |
| ACAAAACCCCACCATAAGCA+CGG | + | chr5.1:30762063-30762082 | None:intergenic | 45.0% | |
| ACAGAGTTATTGGGGTTGTG+AGG | + | chr5.1:30764274-30764293 | None:intergenic | 45.0% | |
| ACCAAATTCACCAACCAAGG+AGG | + | chr5.1:30763007-30763026 | None:intergenic | 45.0% | |
| ACCAGAGAGGAAGTCCTAAA+GGG | - | chr5.1:30765479-30765498 | MS.gene77441:intron | 45.0% | |
| ACGCGAGAAACTAATAGGGT+GGG | + | chr5.1:30761070-30761089 | None:intergenic | 45.0% | |
| AGTGTGTGCCTCTAATGTTG+TGG | + | chr5.1:30762769-30762788 | None:intergenic | 45.0% | |
| ATATTAATCGCCACGGCCAA+TGG | - | chr5.1:30763398-30763417 | MS.gene77441:intron | 45.0% | |
| CAACCAAATCCAACCAACAC+AGG | - | chr5.1:30760182-30760201 | MS.gene77441:intron | 45.0% | |
| CACCAACCATTCCAAGACAA+TGG | + | chr5.1:30761513-30761532 | None:intergenic | 45.0% | |
| CAGAGTTATTGGGGTTGTGA+GGG | + | chr5.1:30764273-30764292 | None:intergenic | 45.0% | |
| CCAAATTCACCAACCAAGGA+GGG | + | chr5.1:30763006-30763025 | None:intergenic | 45.0% | |
| CCGTGGCGATTAATATCAGA+AGG | + | chr5.1:30763394-30763413 | None:intergenic | 45.0% | |
| CGGTAAATGGAAAAGGCGAA+AGG | + | chr5.1:30766000-30766019 | None:intergenic | 45.0% | |
| CTAACTTGAGAGAGAATCCC+GGG | - | chr5.1:30764746-30764765 | MS.gene77441:CDS | 45.0% | |
| CTCACCAAATTCACCAACCA+AGG | + | chr5.1:30763010-30763029 | None:intergenic | 45.0% | |
| CTTGCTACCCAAGTAAAGTC+TGG | - | chr5.1:30765806-30765825 | MS.gene77441:intron | 45.0% | |
| GGACTTCAAAGAGCGGTAAA+TGG | + | chr5.1:30766013-30766032 | None:intergenic | 45.0% | |
| GGCCTAATTTGGCATATGCT+AGG | + | chr5.1:30763197-30763216 | None:intergenic | 45.0% | |
| GGTCCAAAATTATGCCTTGG+AGG | + | chr5.1:30762286-30762305 | None:intergenic | 45.0% | |
| GGTGTGAACCAAACATTCAC+AGG | + | chr5.1:30760969-30760988 | None:intergenic | 45.0% | |
| GTGTTACAACTTCTCTCTCC+CGG | + | chr5.1:30764767-30764786 | None:intergenic | 45.0% | |
| GTTGCATGGACTTCAAAGAG+CGG | + | chr5.1:30766020-30766039 | None:intergenic | 45.0% | |
| GTTTAATCATTCCATGGCGG+TGG | - | chr5.1:30764292-30764311 | MS.gene77441:intron | 45.0% | |
| TACTTTGCTCCCACACAGAA+AGG | + | chr5.1:30765441-30765460 | None:intergenic | 45.0% | |
| TCAGGTTACAGCTGAGATGA+AGG | - | chr5.1:30766452-30766471 | MS.gene77441:CDS | 45.0% | |
| TGCTTCCAAGTTAGACCTTG+AGG | - | chr5.1:30763241-30763260 | MS.gene77441:intron | 45.0% | |
| TGTTACAACTTCTCTCTCCC+GGG | + | chr5.1:30764766-30764785 | None:intergenic | 45.0% | |
| TGTTGTTAACCCTCCTTGGT+TGG | - | chr5.1:30762994-30763013 | MS.gene77441:intron | 45.0% | |
| TTCCAAAATACCATTGGCCG+TGG | + | chr5.1:30763411-30763430 | None:intergenic | 45.0% | |
| TTGCCAGTAACAGGACACTT+AGG | + | chr5.1:30760372-30760391 | None:intergenic | 45.0% | |
| TTTACAAACTGAACAGGGCG+CGG | - | chr5.1:30761172-30761191 | MS.gene77441:intron | 45.0% | |
| ! | AAGAAAGGGAAAGGTGGGTT+TGG | - | chr5.1:30764679-30764698 | MS.gene77441:intron | 45.0% |
| ! | AATTGGAGGGGAGAGTTGAT+GGG | + | chr5.1:30765864-30765883 | None:intergenic | 45.0% |
| ! | AGAAGAGAAATTTGGGGCGA+GGG | + | chr5.1:30766069-30766088 | None:intergenic | 45.0% |
| ! | AGAGACTTTGAGAGCAGATC+GGG | + | chr5.1:30765946-30765965 | None:intergenic | 45.0% |
| ! | CTCATGGCATTGGAATACTG+AGG | - | chr5.1:30761280-30761299 | MS.gene77441:intron | 45.0% |
| ! | GAAAGGGTGTAATCACTTCC+TGG | - | chr5.1:30764651-30764670 | MS.gene77441:intron | 45.0% |
| ! | GAGAGACTTTGAGAGCAGAT+CGG | + | chr5.1:30765947-30765966 | None:intergenic | 45.0% |
| ! | GTCTTGGAATGGTTGGTGTA+TGG | - | chr5.1:30761515-30761534 | MS.gene77441:intron | 45.0% |
| ! | TACAGGGTGTTAATGCCGTT+CGG | + | chr5.1:30761119-30761138 | None:intergenic | 45.0% |
| ! | TGGAGGGTGTGAAACTTTGA+AGG | - | chr5.1:30764629-30764648 | MS.gene77441:intron | 45.0% |
| ! | TTTGACAACCCTGTGTTGGT+TGG | + | chr5.1:30760194-30760213 | None:intergenic | 45.0% |
| ! | TTTGGCTCGTTTGTGTGAAG+CGG | - | chr5.1:30764697-30764716 | MS.gene77441:CDS | 45.0% |
| !! | AACCCTGTGTTGGTTGGATT+TGG | + | chr5.1:30760188-30760207 | None:intergenic | 45.0% |
| !! | ACTCTCGGGTTGAAAAGTGT+CGG | - | chr5.1:30764849-30764868 | MS.gene77441:intron | 45.0% |
| !! | AGAGAAGCACCTTTCTGTGT+GGG | - | chr5.1:30765429-30765448 | MS.gene77441:intron | 45.0% |
| !! | CAATCATATGCTGGCTCTGT+TGG | - | chr5.1:30761806-30761825 | MS.gene77441:intron | 45.0% |
| !! | CTGGCTTTGAATGCAAACCT+TGG | - | chr5.1:30761244-30761263 | MS.gene77441:intron | 45.0% |
| !! | GAACGAAGGTGTTGAAGTGT+TGG | + | chr5.1:30764360-30764379 | None:intergenic | 45.0% |
| !! | GATGGTGATGGTGATGTCTT+TGG | + | chr5.1:30764251-30764270 | None:intergenic | 45.0% |
| !! | TAATATTAATTAAAAATAGT+AGG | + | chr5.1:30761665-30761684 | None:intergenic | 5.0% |
| !!! | TAATAAAATAATAATTTTTC+GGG | + | chr5.1:30765173-30765192 | None:intergenic | 5.0% |
| AAAAGAGCCACGTCACTCTC+GGG | - | chr5.1:30764824-30764843 | MS.gene77441:intron | 50.0% | |
| AATCCTCTGTCTCTCTCGCA+AGG | + | chr5.1:30766271-30766290 | None:intergenic | 50.0% | |
| ACTGTGAACCGTGCTTATGG+TGG | - | chr5.1:30762052-30762071 | MS.gene77441:intron | 50.0% | |
| AGGACTGTGAACCGTGCTTA+TGG | - | chr5.1:30762049-30762068 | MS.gene77441:intron | 50.0% | |
| AGGGCACGCGAGAAACTAAT+AGG | + | chr5.1:30761075-30761094 | None:intergenic | 50.0% | |
| CACGCGAGAAACTAATAGGG+TGG | + | chr5.1:30761071-30761090 | None:intergenic | 50.0% | |
| CATCTTCCTTACAGCGTCCA+CGG | + | chr5.1:30766316-30766335 | None:intergenic | 50.0% | |
| CTAGGTCAAGATCCCAACCT+TGG | - | chr5.1:30761414-30761433 | MS.gene77441:intron | 50.0% | |
| CTCCAATTCGTTGCACACAG+CGG | - | chr5.1:30765876-30765895 | MS.gene77441:intron | 50.0% | |
| CTCGTTTGTGTGAAGCGGTT+TGG | - | chr5.1:30764702-30764721 | MS.gene77441:CDS | 50.0% | |
| CTGTGAACCGTGCTTATGGT+GGG | - | chr5.1:30762053-30762072 | MS.gene77441:intron | 50.0% | |
| CTGTGTGCAACGAATTGGAG+GGG | + | chr5.1:30765876-30765895 | None:intergenic | 50.0% | |
| GAATTGGAGGGGAGAGTTGA+TGG | + | chr5.1:30765865-30765884 | None:intergenic | 50.0% | |
| GCTCTTGTTCTGACTACTGG+TGG | + | chr5.1:30765379-30765398 | None:intergenic | 50.0% | |
| GCTGTGTGCAACGAATTGGA+GGG | + | chr5.1:30765877-30765896 | None:intergenic | 50.0% | |
| GGACCTAAGTGTCCTGTTAC+TGG | - | chr5.1:30760366-30760385 | MS.gene77441:CDS | 50.0% | |
| GGGCACGCGAGAAACTAATA+GGG | + | chr5.1:30761074-30761093 | None:intergenic | 50.0% | |
| GGTTACAGCTGAGATGAAGG+AGG | - | chr5.1:30766455-30766474 | MS.gene77441:CDS | 50.0% | |
| GTTATTGGGGTTGTGAGGGA+TGG | + | chr5.1:30764269-30764288 | None:intergenic | 50.0% | |
| TACTCTGTAGGCCTCAAGTG+TGG | + | chr5.1:30762001-30762020 | None:intergenic | 50.0% | |
| TGGAAAAGGCGAAAGGGCAA+AGG | + | chr5.1:30765993-30766012 | None:intergenic | 50.0% | |
| TGTGAACCGTGCTTATGGTG+GGG | - | chr5.1:30762054-30762073 | MS.gene77441:intron | 50.0% | |
| TTCACAGTCCTGCGGTTTCT+AGG | + | chr5.1:30762040-30762059 | None:intergenic | 50.0% | |
| ! | AAGAGAAATTTGGGGCGAGG+GGG | + | chr5.1:30766067-30766086 | None:intergenic | 50.0% |
| ! | CTCTCGCAAGGACTTGTTTG+AGG | + | chr5.1:30766259-30766278 | None:intergenic | 50.0% |
| ! | GAAGAGAAATTTGGGGCGAG+GGG | + | chr5.1:30766068-30766087 | None:intergenic | 50.0% |
| ! | GAGAAGAGAAATTTGGGGCG+AGG | + | chr5.1:30766070-30766089 | None:intergenic | 50.0% |
| ! | GAGACTTTGAGAGCAGATCG+GGG | + | chr5.1:30765945-30765964 | None:intergenic | 50.0% |
| ! | GGTCGTTATGGTCGATTCTC+TGG | - | chr5.1:30766393-30766412 | MS.gene77441:intron | 50.0% |
| !! | ATTGGAGGGGAGAGTTGATG+GGG | + | chr5.1:30765863-30765882 | None:intergenic | 50.0% |
| !! | CCCTCCTTGGTTGGTGAATT+TGG | - | chr5.1:30763003-30763022 | MS.gene77441:intron | 50.0% |
| !! | CGAAGGTGTTGAAGTGTTGG+TGG | + | chr5.1:30764357-30764376 | None:intergenic | 50.0% |
| !! | CTCTCGGGTTGAAAAGTGTC+GGG | - | chr5.1:30764850-30764869 | MS.gene77441:intron | 50.0% |
| !! | GAGAGAAGCACCTTTCTGTG+TGG | - | chr5.1:30765428-30765447 | MS.gene77441:intron | 50.0% |
| !! | GCTTATGGTGGGGTTTTGTC+TGG | - | chr5.1:30762064-30762083 | MS.gene77441:intron | 50.0% |
| !! | GGAGTGTTGTTAACCCTCCT+TGG | - | chr5.1:30762990-30763009 | MS.gene77441:intron | 50.0% |
| !! | GGGTTTTGACAACCCTGTGT+TGG | + | chr5.1:30760198-30760217 | None:intergenic | 50.0% |
| !! | TATGGTGGGGTTTTGTCTGG+AGG | - | chr5.1:30762067-30762086 | MS.gene77441:intron | 50.0% |
| !! | TCCCTTTAGGACTTCCTCTC+TGG | + | chr5.1:30765483-30765502 | None:intergenic | 50.0% |
| !!! | TTTTGTCTGGAGGTGCTGTC+CGG | - | chr5.1:30762077-30762096 | MS.gene77441:intron | 50.0% |
| AAATGTGTCCGGTCCCGACT+TGG | + | chr5.1:30765228-30765247 | None:intergenic | 55.0% | |
| AAGCACGGTTCACAGTCCTG+CGG | + | chr5.1:30762048-30762067 | None:intergenic | 55.0% | |
| AATGTGTCCGGTCCCGACTT+GGG | + | chr5.1:30765227-30765246 | None:intergenic | 55.0% | |
| AGGGCGCGGAGAAACTCATT+GGG | - | chr5.1:30761186-30761205 | MS.gene77441:intron | 55.0% | |
| AGTCCTTGCGAGAGAGACAG+AGG | - | chr5.1:30766265-30766284 | MS.gene77441:intron | 55.0% | |
| CACAGGGTTGTCAAAACCCC+TGG | - | chr5.1:30760199-30760218 | MS.gene77441:intron | 55.0% | |
| CATGCAACCTCTTCTTCGCC+CGG | - | chr5.1:30766032-30766051 | MS.gene77441:intron | 55.0% | |
| CGCGGAGAAACTCATTGGGT+GGG | - | chr5.1:30761190-30761209 | MS.gene77441:intron | 55.0% | |
| CGCTGTGTGCAACGAATTGG+AGG | + | chr5.1:30765878-30765897 | None:intergenic | 55.0% | |
| GCAGAAGCGGTGCACATAAG+AGG | - | chr5.1:30763723-30763742 | MS.gene77441:intron | 55.0% | |
| GCGGAGAAACTCATTGGGTG+GGG | - | chr5.1:30761191-30761210 | MS.gene77441:intron | 55.0% | |
| GTATCTCCGTGGACGCTGTA+AGG | - | chr5.1:30766307-30766326 | MS.gene77441:intron | 55.0% | |
| TGCCGCTGTGTGCAACGAAT+TGG | + | chr5.1:30765881-30765900 | None:intergenic | 55.0% | |
| TGGTTGCGTAGCTGTGACGA+CGG | + | chr5.1:30760168-30760187 | None:intergenic | 55.0% | |
| TTGAGAGCAGATCGGGGAAG+AGG | + | chr5.1:30765939-30765958 | None:intergenic | 55.0% | |
| ! | CGCCACGGCCAATGGTATTT+TGG | - | chr5.1:30763406-30763425 | MS.gene77441:intron | 55.0% |
| !! | TTTGTCTGGAGGTGCTGTCC+GGG | - | chr5.1:30762078-30762097 | MS.gene77441:intron | 55.0% |
| ACATTGGCCCAAGTCGGGAC+CGG | - | chr5.1:30765217-30765236 | MS.gene77441:intron | 60.0% | |
| CAAGGCTGCCTAGAAACCGC+AGG | - | chr5.1:30762029-30762048 | MS.gene77441:intron | 60.0% | |
| CAGGGCGCGGAGAAACTCAT+TGG | - | chr5.1:30761185-30761204 | MS.gene77441:intron | 60.0% | |
| CGGGCGAAGAAGAGGTTGCA+TGG | + | chr5.1:30766034-30766053 | None:intergenic | 60.0% | |
| CGTCACTCTCGGGACACTCT+CGG | - | chr5.1:30764834-30764853 | MS.gene77441:intron | 60.0% | |
| CTCGCGTGCCCTATGCAGTT+CGG | - | chr5.1:30761083-30761102 | MS.gene77441:intron | 60.0% | |
| GCGCGGAGAAACTCATTGGG+TGG | - | chr5.1:30761189-30761208 | MS.gene77441:intron | 60.0% | |
| GGGGTTGTGAGGGATGGTGA+TGG | + | chr5.1:30764263-30764282 | None:intergenic | 60.0% | |
| GTAGCTGTGACGACGGCGAT+AGG | + | chr5.1:30760161-30760180 | None:intergenic | 60.0% | |
| GTCACTCTCGGGACACTCTC+GGG | - | chr5.1:30764835-30764854 | MS.gene77441:intron | 60.0% | |
| ! | AGAGTGTCCCGAGAGTGACG+TGG | + | chr5.1:30764834-30764853 | None:intergenic | 60.0% |
| GAGTCGACCGGGCGAAGAAG+AGG | + | chr5.1:30766042-30766061 | None:intergenic | 65.0% | |
| !! | CTGGAGGTGCTGTCCGGGAA+AGG | - | chr5.1:30762083-30762102 | MS.gene77441:intron | 65.0% |
| GCGAGGGGGAAGAGTCGACC+GGG | + | chr5.1:30766053-30766072 | None:intergenic | 70.0% | |
| GGCGAGGGGGAAGAGTCGAC+CGG | + | chr5.1:30766054-30766073 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 30760142 | 30766659 | 30760142 | ID=MS.gene77441 |
| chr5.1 | mRNA | 30760142 | 30766659 | 30760142 | ID=MS.gene77441.t1;Parent=MS.gene77441 |
| chr5.1 | exon | 30766581 | 30766659 | 30766581 | ID=MS.gene77441.t1.exon1;Parent=MS.gene77441.t1 |
| chr5.1 | CDS | 30766581 | 30766659 | 30766581 | ID=cds.MS.gene77441.t1;Parent=MS.gene77441.t1 |
| chr5.1 | exon | 30766397 | 30766476 | 30766397 | ID=MS.gene77441.t1.exon2;Parent=MS.gene77441.t1 |
| chr5.1 | CDS | 30766397 | 30766476 | 30766397 | ID=cds.MS.gene77441.t1;Parent=MS.gene77441.t1 |
| chr5.1 | exon | 30764697 | 30764806 | 30764697 | ID=MS.gene77441.t1.exon3;Parent=MS.gene77441.t1 |
| chr5.1 | CDS | 30764697 | 30764806 | 30764697 | ID=cds.MS.gene77441.t1;Parent=MS.gene77441.t1 |
| chr5.1 | exon | 30764523 | 30764598 | 30764523 | ID=MS.gene77441.t1.exon4;Parent=MS.gene77441.t1 |
| chr5.1 | CDS | 30764523 | 30764598 | 30764523 | ID=cds.MS.gene77441.t1;Parent=MS.gene77441.t1 |
| chr5.1 | exon | 30760478 | 30760606 | 30760478 | ID=MS.gene77441.t1.exon5;Parent=MS.gene77441.t1 |
| chr5.1 | CDS | 30760478 | 30760606 | 30760478 | ID=cds.MS.gene77441.t1;Parent=MS.gene77441.t1 |
| chr5.1 | exon | 30760232 | 30760426 | 30760232 | ID=MS.gene77441.t1.exon6;Parent=MS.gene77441.t1 |
| chr5.1 | CDS | 30760232 | 30760426 | 30760232 | ID=cds.MS.gene77441.t1;Parent=MS.gene77441.t1 |
| chr5.1 | exon | 30760142 | 30760162 | 30760142 | ID=MS.gene77441.t1.exon7;Parent=MS.gene77441.t1 |
| chr5.1 | CDS | 30760142 | 30760162 | 30760142 | ID=cds.MS.gene77441.t1;Parent=MS.gene77441.t1 |
| Gene Sequence |
| Protein sequence |
