Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059726.t1 | RHN74985.1 | 99.4 | 673 | 4 | 0 | 1 | 673 | 1 | 673 | 0.00E+00 | 1206.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059726.t1 | Q9C6I8 | 79.3 | 675 | 134 | 2 | 1 | 673 | 1 | 671 | 2.5e-278 | 959.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059726.t1 | A0A396JEX7 | 99.4 | 673 | 4 | 0 | 1 | 673 | 1 | 673 | 0.0e+00 | 1206.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050838 | MS.gene059726 | 0.822673 | 2.09E-53 | -1.69E-46 |
| MS.gene051746 | MS.gene059726 | 0.828612 | 8.16E-55 | -1.69E-46 |
| MS.gene051748 | MS.gene059726 | 0.820717 | 5.92E-53 | -1.69E-46 |
| MS.gene051850 | MS.gene059726 | 0.857807 | 1.27E-62 | -1.69E-46 |
| MS.gene051903 | MS.gene059726 | 0.803822 | 2.90E-49 | -1.69E-46 |
| MS.gene053109 | MS.gene059726 | 0.804506 | 2.09E-49 | -1.69E-46 |
| MS.gene053952 | MS.gene059726 | 0.805092 | 1.58E-49 | -1.69E-46 |
| MS.gene054937 | MS.gene059726 | 0.80845 | 3.08E-50 | -1.69E-46 |
| MS.gene056075 | MS.gene059726 | 0.832722 | 8.04E-56 | -1.69E-46 |
| MS.gene057052 | MS.gene059726 | 0.802015 | 6.86E-49 | -1.69E-46 |
| MS.gene057094 | MS.gene059726 | 0.888654 | 4.87E-73 | -1.69E-46 |
| MS.gene059726 | MS.gene06001 | 0.828608 | 8.18E-55 | -1.69E-46 |
| MS.gene059726 | MS.gene060574 | 0.804411 | 2.19E-49 | -1.69E-46 |
| MS.gene059726 | MS.gene061145 | 0.804167 | 2.46E-49 | -1.69E-46 |
| MS.gene059726 | MS.gene06172 | 0.800609 | 1.33E-48 | -1.69E-46 |
| MS.gene059726 | MS.gene063817 | 0.808529 | 2.96E-50 | -1.69E-46 |
| MS.gene059726 | MS.gene065602 | 0.801198 | 1.01E-48 | -1.69E-46 |
| MS.gene059726 | MS.gene065715 | 0.808051 | 3.74E-50 | -1.69E-46 |
| MS.gene059726 | MS.gene066455 | 0.846122 | 2.65E-59 | -1.69E-46 |
| MS.gene059726 | MS.gene067938 | 0.802144 | 6.45E-49 | -1.69E-46 |
| MS.gene059726 | MS.gene069310 | 0.851502 | 8.51E-61 | -1.69E-46 |
| MS.gene059726 | MS.gene069962 | 0.8493 | 3.53E-60 | -1.69E-46 |
| MS.gene059726 | MS.gene072057 | 0.812551 | 4.00E-51 | -1.69E-46 |
| MS.gene059726 | MS.gene07222 | 0.826924 | 2.08E-54 | -1.69E-46 |
| MS.gene059726 | MS.gene072641 | 0.812345 | 4.44E-51 | -1.69E-46 |
| MS.gene059726 | MS.gene073332 | 0.809404 | 1.92E-50 | -1.69E-46 |
| MS.gene059726 | MS.gene07808 | 0.826269 | 2.98E-54 | -1.69E-46 |
| MS.gene059726 | MS.gene07810 | 0.808361 | 3.22E-50 | -1.69E-46 |
| MS.gene059726 | MS.gene20740 | 0.821633 | 3.64E-53 | -1.69E-46 |
| MS.gene059726 | MS.gene21219 | 0.812585 | 3.94E-51 | -1.69E-46 |
| MS.gene059726 | MS.gene24867 | 0.854461 | 1.21E-61 | -1.69E-46 |
| MS.gene059726 | MS.gene27879 | 0.809745 | 1.63E-50 | -1.69E-46 |
| MS.gene059726 | MS.gene28632 | 0.82041 | 6.96E-53 | -1.69E-46 |
| MS.gene059726 | MS.gene29581 | 0.812229 | 4.71E-51 | -1.69E-46 |
| MS.gene059726 | MS.gene30325 | 0.810665 | 1.03E-50 | -1.69E-46 |
| MS.gene059726 | MS.gene30904 | 0.804259 | 2.35E-49 | -1.69E-46 |
| MS.gene059726 | MS.gene31405 | 0.808526 | 2.97E-50 | -1.69E-46 |
| MS.gene059726 | MS.gene35379 | 0.800964 | 1.13E-48 | -1.69E-46 |
| MS.gene059726 | MS.gene35699 | 0.80124 | 9.89E-49 | -1.69E-46 |
| MS.gene059726 | MS.gene38070 | 0.801079 | 1.07E-48 | -1.69E-46 |
| MS.gene059726 | MS.gene40055 | 0.804739 | 1.87E-49 | -1.69E-46 |
| MS.gene059726 | MS.gene42247 | 0.810686 | 1.02E-50 | -1.69E-46 |
| MS.gene059726 | MS.gene44141 | 0.819142 | 1.36E-52 | -1.69E-46 |
| MS.gene059726 | MS.gene49777 | 0.812481 | 4.15E-51 | -1.69E-46 |
| MS.gene059726 | MS.gene55732 | 0.824311 | 8.65E-54 | -1.69E-46 |
| MS.gene059726 | MS.gene56166 | 0.809726 | 1.64E-50 | -1.69E-46 |
| MS.gene059726 | MS.gene57391 | 0.812059 | 5.13E-51 | -1.69E-46 |
| MS.gene059726 | MS.gene57462 | 0.841817 | 3.77E-58 | -1.69E-46 |
| MS.gene059726 | MS.gene57578 | 0.854698 | 1.04E-61 | -1.69E-46 |
| MS.gene059726 | MS.gene58227 | 0.827004 | 1.99E-54 | -1.69E-46 |
| MS.gene059726 | MS.gene58693 | 0.825956 | 3.53E-54 | -1.69E-46 |
| MS.gene059726 | MS.gene62834 | 0.814524 | 1.47E-51 | -1.69E-46 |
| MS.gene059726 | MS.gene63726 | 0.84122 | 5.42E-58 | -1.69E-46 |
| MS.gene059726 | MS.gene65076 | 0.833259 | 5.91E-56 | -1.69E-46 |
| MS.gene059726 | MS.gene66089 | 0.854775 | 9.83E-62 | -1.69E-46 |
| MS.gene059726 | MS.gene67235 | 0.805628 | 1.22E-49 | -1.69E-46 |
| MS.gene059726 | MS.gene67681 | 0.803831 | 2.89E-49 | -1.69E-46 |
| MS.gene059726 | MS.gene70215 | 0.815667 | 8.22E-52 | -1.69E-46 |
| MS.gene059726 | MS.gene70218 | 0.802071 | 6.67E-49 | -1.69E-46 |
| MS.gene059726 | MS.gene72285 | 0.815469 | 9.10E-52 | -1.69E-46 |
| MS.gene059726 | MS.gene75171 | 0.847188 | 1.35E-59 | -1.69E-46 |
| MS.gene059726 | MS.gene77163 | 0.800924 | 1.15E-48 | -1.69E-46 |
| MS.gene059726 | MS.gene77282 | 0.833686 | 4.62E-56 | -1.69E-46 |
| MS.gene059726 | MS.gene77441 | 0.829891 | 3.99E-55 | -1.69E-46 |
| MS.gene059726 | MS.gene81280 | 0.818569 | 1.83E-52 | -1.69E-46 |
| MS.gene059726 | MS.gene83135 | 0.808361 | 3.22E-50 | -1.69E-46 |
| MS.gene059726 | MS.gene83217 | 0.819331 | 1.23E-52 | -1.69E-46 |
| MS.gene059726 | MS.gene84316 | 0.808039 | 3.77E-50 | -1.69E-46 |
| MS.gene059726 | MS.gene84455 | 0.806133 | 9.54E-50 | -1.69E-46 |
| MS.gene059726 | MS.gene85108 | 0.804955 | 1.68E-49 | -1.69E-46 |
| MS.gene059726 | MS.gene86937 | 0.824121 | 9.58E-54 | -1.69E-46 |
| MS.gene059726 | MS.gene88427 | 0.834972 | 2.20E-56 | -1.69E-46 |
| MS.gene059726 | MS.gene90833 | 0.812649 | 3.81E-51 | -1.69E-46 |
| MS.gene059726 | MS.gene91524 | 0.804747 | 1.86E-49 | -1.69E-46 |
| MS.gene059726 | MS.gene92572 | 0.833181 | 6.18E-56 | -1.69E-46 |
| MS.gene059726 | MS.gene94561 | 0.821704 | 3.51E-53 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059726.t1 | MTR_8g018150 | 99.257 | 673 | 5 | 0 | 1 | 673 | 1 | 673 | 0.0 | 1377 |
| MS.gene059726.t1 | MTR_2g078050 | 95.691 | 673 | 6 | 1 | 1 | 673 | 1 | 650 | 0.0 | 1315 |
| MS.gene059726.t1 | MTR_2g078050 | 98.883 | 537 | 6 | 0 | 137 | 673 | 1 | 537 | 0.0 | 1088 |
| MS.gene059726.t1 | MTR_7g450930 | 28.065 | 310 | 196 | 5 | 62 | 361 | 49 | 341 | 2.56e-31 | 125 |
| MS.gene059726.t1 | MTR_7g450930 | 28.065 | 310 | 196 | 5 | 62 | 361 | 136 | 428 | 2.50e-30 | 124 |
| MS.gene059726.t1 | MTR_7g450930 | 29.707 | 239 | 154 | 2 | 62 | 293 | 136 | 367 | 2.22e-29 | 121 |
| MS.gene059726.t1 | MTR_2g082240 | 61.607 | 112 | 37 | 3 | 566 | 673 | 39 | 148 | 5.53e-28 | 110 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059726.t1 | AT1G50920 | 76.991 | 678 | 144 | 5 | 1 | 673 | 1 | 671 | 0.0 | 1068 |
| MS.gene059726.t1 | AT1G10300 | 70.294 | 680 | 173 | 6 | 1 | 673 | 30 | 687 | 0.0 | 930 |
| MS.gene059726.t1 | AT1G10300 | 70.294 | 680 | 173 | 6 | 1 | 673 | 30 | 687 | 0.0 | 930 |
| MS.gene059726.t1 | AT1G10300 | 70.294 | 680 | 173 | 6 | 1 | 673 | 1 | 658 | 0.0 | 929 |
| MS.gene059726.t1 | AT1G80770 | 25.967 | 362 | 256 | 4 | 6 | 365 | 76 | 427 | 1.60e-30 | 125 |
| MS.gene059726.t1 | AT1G80770 | 27.241 | 290 | 206 | 2 | 6 | 293 | 69 | 355 | 3.24e-30 | 124 |
| MS.gene059726.t1 | AT1G80770 | 28.448 | 232 | 166 | 0 | 62 | 293 | 51 | 282 | 3.98e-30 | 122 |
| MS.gene059726.t1 | AT1G80770 | 27.241 | 290 | 206 | 2 | 6 | 293 | 92 | 378 | 4.12e-30 | 124 |
| MS.gene059726.t1 | AT1G80770 | 25.967 | 362 | 256 | 4 | 6 | 365 | 107 | 458 | 5.93e-30 | 124 |
| MS.gene059726.t1 | AT1G80770 | 25.967 | 362 | 256 | 4 | 6 | 365 | 123 | 474 | 1.57e-29 | 123 |
| MS.gene059726.t1 | AT3G23860 | 36.757 | 185 | 100 | 6 | 6 | 179 | 6 | 184 | 5.10e-20 | 90.1 |
| MS.gene059726.t1 | AT3G23860 | 36.757 | 185 | 100 | 6 | 6 | 179 | 19 | 197 | 7.20e-20 | 90.1 |
| MS.gene059726.t1 | AT3G23860 | 36.757 | 185 | 100 | 6 | 6 | 179 | 19 | 197 | 7.20e-20 | 90.1 |
Find 165 sgRNAs with CRISPR-Local
Find 184 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATACAAGTGCTTCGGTTTA+AGG | 0.111950 | 2.4:+20519759 | None:intergenic |
| GGCATTCTTGTTTCTCTTCT+TGG | 0.113775 | 2.4:+20519814 | None:intergenic |
| CATTGATACACCTGGGATTT+TGG | 0.122171 | 2.4:-20521064 | MS.gene059726:CDS |
| AGATAATCTGCCAGAAATTT+TGG | 0.147637 | 2.4:-20520395 | MS.gene059726:CDS |
| ATCAAAATAGTCCTGGTATT+TGG | 0.197584 | 2.4:+20521225 | None:intergenic |
| TTGTTCTTCTTGGATATATC+AGG | 0.214420 | 2.4:-20520967 | MS.gene059726:CDS |
| AATACTGCTAGGAATCTTAT+TGG | 0.238602 | 2.4:-20521423 | MS.gene059726:CDS |
| TGGTCCGAGTTTGGCGTATT+TGG | 0.244369 | 2.4:-20521289 | MS.gene059726:CDS |
| TTGTGACCATCCAAAATTTC+TGG | 0.250913 | 2.4:+20520385 | None:intergenic |
| TCCTTCTGGTCACGTGGTTT+CGG | 0.274078 | 2.4:+20520586 | None:intergenic |
| CCTTTATCAACAAGATTACT+AGG | 0.281811 | 2.4:-20521173 | MS.gene059726:CDS |
| AGCGGCAATATTGTTCTTCT+TGG | 0.291223 | 2.4:-20520977 | MS.gene059726:CDS |
| ACGAGGAAACTCGTCGATTA+TGG | 0.301155 | 2.4:+20521530 | None:intergenic |
| AAGCAACTTAACATAATCTT+TGG | 0.307508 | 2.4:+20521392 | None:intergenic |
| ATAATGCTTTCTCAAATTCA+TGG | 0.310089 | 2.4:+20520444 | None:intergenic |
| TCTTGGGCTTGATCCTTCTA+TGG | 0.315254 | 2.4:-20520077 | MS.gene059726:CDS |
| ATCCCATCGTTTCTTCCTTC+TGG | 0.317491 | 2.4:+20519995 | None:intergenic |
| TTTGAGAAAGCATTATATTC+TGG | 0.326466 | 2.4:-20520437 | MS.gene059726:CDS |
| GCTAAAGCCTCTTGCTGTTC+CGG | 0.334792 | 2.4:+20520241 | None:intergenic |
| GTAGATCACTGTCTCGTTCC+AGG | 0.336726 | 2.4:-20519931 | MS.gene059726:CDS |
| AAGGATCTGGAGGAAGAAAA+TGG | 0.337588 | 2.4:-20520484 | MS.gene059726:CDS |
| TACACGGAGGTCTTTCCTTC+TGG | 0.338390 | 2.4:+20520572 | None:intergenic |
| TGAAGCAGATCACCATAAAA+AGG | 0.341915 | 2.4:+20521492 | None:intergenic |
| CCTAGTAATCTTGTTGATAA+AGG | 0.346637 | 2.4:+20521173 | None:intergenic |
| TCGACGAGTTTCCTCGTCTT+GGG | 0.351870 | 2.4:-20521524 | MS.gene059726:CDS |
| GGAAGGCAGCTGTCGTCTCT+TGG | 0.361895 | 2.4:-20520094 | MS.gene059726:CDS |
| TTGTTCCTGGAGAAGGCCTT+AGG | 0.365376 | 2.4:-20519883 | MS.gene059726:CDS |
| TATGTTAAGTTGCTTAAGTA+TGG | 0.368634 | 2.4:-20521384 | MS.gene059726:CDS |
| TGTTTGAAGGTTGCTGCTCT+TGG | 0.370788 | 2.4:-20521339 | MS.gene059726:CDS |
| AAACCGAAGCACTTGTATAC+TGG | 0.371562 | 2.4:-20519755 | MS.gene059726:CDS |
| GTGAAATTGCATAGCCTTTG+TGG | 0.373188 | 2.4:+20521619 | None:intergenic |
| TAAGAGGATTGGTCCGAGTT+TGG | 0.377873 | 2.4:-20521298 | MS.gene059726:CDS |
| TGGATATATCAGGGTCTTGT+GGG | 0.379230 | 2.4:-20520957 | MS.gene059726:CDS |
| TCCACCCTATGTAGAATGTC+AGG | 0.383879 | 2.4:+20520343 | None:intergenic |
| TACCACTAAGTCGCTGTTTG+TGG | 0.397916 | 2.4:-20521121 | MS.gene059726:CDS |
| CCACCACATGAAGTTGTTCC+TGG | 0.400337 | 2.4:-20519896 | MS.gene059726:CDS |
| TGTAATGATCCTTGTTATAG+AGG | 0.402232 | 2.4:+20521466 | None:intergenic |
| TAGAAAGAGAGGAAGGGTTA+AGG | 0.404415 | 2.4:-20520315 | MS.gene059726:CDS |
| GTTTGAAGGTTGCTGCTCTT+GGG | 0.414727 | 2.4:-20521338 | MS.gene059726:CDS |
| ATATTCTGGCTGATGATGAT+TGG | 0.429551 | 2.4:-20520423 | MS.gene059726:CDS |
| TTGGATATATCAGGGTCTTG+TGG | 0.430521 | 2.4:-20520958 | MS.gene059726:CDS |
| ACCCACAAACAGCGACTTAG+TGG | 0.433204 | 2.4:+20521119 | None:intergenic |
| GAGTTTGGCGTATTTGGAAC+AGG | 0.435961 | 2.4:-20521283 | MS.gene059726:CDS |
| AAGAGGCTTTAGCTGAGATT+AGG | 0.440739 | 2.4:-20520231 | MS.gene059726:CDS |
| ACCACTAAGTCGCTGTTTGT+GGG | 0.442566 | 2.4:-20521120 | MS.gene059726:CDS |
| GAAGGCAGCTGTCGTCTCTT+GGG | 0.448895 | 2.4:-20520093 | MS.gene059726:CDS |
| GGAACAGGTTAGGCAGCATA+TGG | 0.451534 | 2.4:-20521268 | MS.gene059726:CDS |
| GAAGAGTTAGAAAGAGAGGA+AGG | 0.452104 | 2.4:-20520322 | MS.gene059726:CDS |
| GCAGTTCACAACAGAAAGAA+TGG | 0.457219 | 2.4:-20520116 | MS.gene059726:CDS |
| AAGGAACTCTTCCCGACATT+CGG | 0.460165 | 2.4:+20521192 | None:intergenic |
| GTCGCTGTTTGTGGGTCATA+CGG | 0.461201 | 2.4:-20521112 | MS.gene059726:CDS |
| GCGCCTGTCTGTCTTTCCGT+TGG | 0.461936 | 2.4:+20519724 | None:intergenic |
| AAATCAACGACTGTCTGAAC+AGG | 0.462069 | 2.4:-20520624 | MS.gene059726:CDS |
| CTGAGACGCTGTTTCTTGCT+AGG | 0.462261 | 2.4:+20519953 | None:intergenic |
| GGATGTGTACTGTGCTTAAG+AGG | 0.463986 | 2.4:-20521314 | MS.gene059726:CDS |
| TGGCGTATTTGGAACAGGTT+AGG | 0.466876 | 2.4:-20521278 | MS.gene059726:CDS |
| ATCGACGAGTTTCCTCGTCT+TGG | 0.469968 | 2.4:-20521525 | MS.gene059726:CDS |
| TCGAATTTCCTTGAAACGGT+TGG | 0.471228 | 2.4:+20520148 | None:intergenic |
| AGAGCCGACCAACCGTTTCA+AGG | 0.471571 | 2.4:-20520156 | MS.gene059726:CDS |
| ATTCTGTTAATAGCCATAGA+AGG | 0.473599 | 2.4:+20520064 | None:intergenic |
| CAAGGAAATTCGACAAGGAC+AGG | 0.474490 | 2.4:-20520138 | MS.gene059726:CDS |
| CTTGTCGAATTTCCTTGAAA+CGG | 0.475481 | 2.4:+20520144 | None:intergenic |
| CTGGTATTTGGATCAATTGA+AGG | 0.475786 | 2.4:+20521237 | None:intergenic |
| AAGATCACTGTGGTACCAAA+TGG | 0.476500 | 2.4:-20521699 | MS.gene059726:CDS |
| TTTCCAGTATACAAGTGCTT+CGG | 0.477671 | 2.4:+20519752 | None:intergenic |
| GGTGGAAGAGTTAGAAAGAG+AGG | 0.483491 | 2.4:-20520326 | MS.gene059726:CDS |
| ATCTGAGGAGGATATGAAGT+TGG | 0.486204 | 2.4:-20520824 | MS.gene059726:CDS |
| CAAGACTGATTTGCAGCCGT+TGG | 0.487122 | 2.4:-20520854 | MS.gene059726:CDS |
| AACAACTTCATGTGGTGGGC+GGG | 0.497263 | 2.4:+20519901 | None:intergenic |
| GTATCGTTGTAAGTGTTTGA+AGG | 0.497290 | 2.4:-20521352 | MS.gene059726:CDS |
| TGGGTATACTATTGCTCAGC+AGG | 0.498609 | 2.4:-20520938 | MS.gene059726:CDS |
| ATAATATTCCGATCCTCAAA+CGG | 0.499586 | 2.4:+20521036 | None:intergenic |
| CTTTAGCTTCCAAAACTGCC+GGG | 0.505469 | 2.4:+20520545 | None:intergenic |
| TGTTCCTGGAGAAGGCCTTA+GGG | 0.506108 | 2.4:-20519882 | MS.gene059726:CDS |
| ACTGATTTGCAGCCGTTGGA+TGG | 0.507314 | 2.4:-20520850 | MS.gene059726:CDS |
| TTTGTGGGTATCCGAATGTC+GGG | 0.508017 | 2.4:-20521203 | MS.gene059726:CDS |
| TCATCTTAATCTCAACCCTC+TGG | 0.510875 | 2.4:+20520656 | None:intergenic |
| TCTATCAGCTTCTCCACGCT+TGG | 0.514227 | 2.4:+20519793 | None:intergenic |
| TGGATAGGCCGTTTGAGGAT+CGG | 0.514877 | 2.4:-20521044 | MS.gene059726:CDS |
| GCTTTAGCTTCCAAAACTGC+CGG | 0.515588 | 2.4:+20520544 | None:intergenic |
| TTGAAGACTTCGATTGGTCA+TGG | 0.522130 | 2.4:-20520778 | MS.gene059726:CDS |
| CATGAAGTTGTTCCTGGAGA+AGG | 0.522867 | 2.4:-20519890 | MS.gene059726:CDS |
| ATACGGATTACAAGTATTTG+AGG | 0.523494 | 2.4:-20521095 | MS.gene059726:CDS |
| AGGCTTTAGCTGAGATTAGG+AGG | 0.525671 | 2.4:-20520228 | MS.gene059726:CDS |
| ATTTGTGGGTATCCGAATGT+CGG | 0.527331 | 2.4:-20521204 | MS.gene059726:CDS |
| GATCATTACAAGCTTGCACT+TGG | 0.533978 | 2.4:-20521453 | MS.gene059726:CDS |
| CGACGAGTTTCCTCGTCTTG+GGG | 0.536676 | 2.4:-20521523 | MS.gene059726:CDS |
| CATCTAGGAAAGGTCGGAAG+AGG | 0.537520 | 2.4:-20520027 | MS.gene059726:CDS |
| AAGAGAGGAAGGGTTAAGGC+AGG | 0.537690 | 2.4:-20520311 | MS.gene059726:CDS |
| AGCTAAGCAAGCAGCTGCTG+AGG | 0.538394 | 2.4:-20520524 | MS.gene059726:CDS |
| CAGTTCACAACAGAAAGAAT+GGG | 0.538822 | 2.4:-20520115 | MS.gene059726:CDS |
| TGTTCTTCTTGGATATATCA+GGG | 0.539338 | 2.4:-20520966 | MS.gene059726:CDS |
| CTGGTTCAGCAATCTCTCAC+AGG | 0.539812 | 2.4:+20520675 | None:intergenic |
| GAAGCGTTGAAGACTTCGAT+TGG | 0.542280 | 2.4:-20520784 | MS.gene059726:CDS |
| GAGGAAGAAAATGGAGGTGC+TGG | 0.545405 | 2.4:-20520475 | MS.gene059726:CDS |
| TTGACCCTGACATTCTACAT+AGG | 0.545444 | 2.4:-20520348 | MS.gene059726:CDS |
| GCTCCAACGGAAAGACAGAC+AGG | 0.546765 | 2.4:-20519727 | MS.gene059726:CDS |
| ATTTCCTTGAAACGGTTGGT+CGG | 0.548211 | 2.4:+20520152 | None:intergenic |
| GACTTAGTGGTAAACGCATA+CGG | 0.548539 | 2.4:+20521132 | None:intergenic |
| TGAAGGTTGCTGCTCTTGGG+AGG | 0.548846 | 2.4:-20521335 | MS.gene059726:CDS |
| CCCACAAATCAAAATAGTCC+TGG | 0.549797 | 2.4:+20521218 | None:intergenic |
| CTTTATCAACAAGATTACTA+GGG | 0.552134 | 2.4:-20521172 | MS.gene059726:CDS |
| GAATCCCTAAGGCCTTCTCC+AGG | 0.554177 | 2.4:+20519878 | None:intergenic |
| TATCAAGTCATTGATACACC+TGG | 0.555673 | 2.4:-20521072 | MS.gene059726:CDS |
| CAAAGCAATTAAACTTGCGA+AGG | 0.557324 | 2.4:-20519843 | MS.gene059726:CDS |
| TGGTGGGCGGGAGACCGACC+TGG | 0.559000 | 2.4:+20519913 | None:intergenic |
| GGAAGGGTTAAGGCAGGCAG+AGG | 0.559674 | 2.4:-20520305 | MS.gene059726:CDS |
| TTCGATTGGTCATGGAGGCG+AGG | 0.565252 | 2.4:-20520770 | MS.gene059726:CDS |
| TCGATTGGTCATGGAGGCGA+GGG | 0.566051 | 2.4:-20520769 | MS.gene059726:CDS |
| TGTACTGTGCTTAAGAGGAT+TGG | 0.566698 | 2.4:-20521309 | MS.gene059726:CDS |
| ATGAGTGCGTTGACTGAAGA+AGG | 0.569510 | 2.4:-20520721 | MS.gene059726:CDS |
| TTCTTCAGTCAACGCACTCA+TGG | 0.570366 | 2.4:+20520723 | None:intergenic |
| CCAGGAACAACTTCATGTGG+TGG | 0.570925 | 2.4:+20519896 | None:intergenic |
| GGTCTTTCCTTCTGGTCACG+TGG | 0.574635 | 2.4:+20520580 | None:intergenic |
| TTGTTGCACACAACAATCAA+AGG | 0.575746 | 2.4:+20520874 | None:intergenic |
| TGACCCTGACATTCTACATA+GGG | 0.576210 | 2.4:-20520347 | MS.gene059726:CDS |
| CTTCAATTGATCCAAATACC+AGG | 0.577769 | 2.4:-20521236 | MS.gene059726:CDS |
| TGTTCCAAATACGCCAAACT+CGG | 0.584896 | 2.4:+20521285 | None:intergenic |
| TCCGAAACCACGTGACCAGA+AGG | 0.588470 | 2.4:-20520587 | MS.gene059726:CDS |
| AACGGCCTATCCAAAATCCC+AGG | 0.591191 | 2.4:+20521054 | None:intergenic |
| TCCTCAGATAATCCATCCAA+CGG | 0.593838 | 2.4:+20520838 | None:intergenic |
| TATACTGGAAAGCGCTCCAA+CGG | 0.594583 | 2.4:-20519740 | MS.gene059726:CDS |
| AAGACCTCCGTGTATTCCCC+CGG | 0.595257 | 2.4:-20520563 | MS.gene059726:CDS |
| TTTAGCTTCCAAAACTGCCG+GGG | 0.602297 | 2.4:+20520546 | None:intergenic |
| CAGGAACAACTTCATGTGGT+GGG | 0.604752 | 2.4:+20519897 | None:intergenic |
| TGCTCTTGCGCATTTGAGAG+CGG | 0.605421 | 2.4:-20520995 | MS.gene059726:CDS |
| CCCTGACATTCTACATAGGG+TGG | 0.608061 | 2.4:-20520344 | MS.gene059726:CDS |
| TCACCAGAAGGAAGAAACGA+TGG | 0.608184 | 2.4:-20519998 | MS.gene059726:CDS |
| ATCACTGTCTCGTTCCAGGT+CGG | 0.608845 | 2.4:-20519927 | MS.gene059726:CDS |
| TTGGTCAGATTAATACTGCT+AGG | 0.610371 | 2.4:-20521434 | MS.gene059726:CDS |
| AGAAGGAAGAAACGATGGGA+TGG | 0.612953 | 2.4:-20519993 | MS.gene059726:CDS |
| GAACAACTTCATGTGGTGGG+CGG | 0.613605 | 2.4:+20519900 | None:intergenic |
| AAGAGTTAGAAAGAGAGGAA+GGG | 0.614663 | 2.4:-20520321 | MS.gene059726:CDS |
| CACCAGAAGGAAGAAACGAT+GGG | 0.615415 | 2.4:-20519997 | MS.gene059726:CDS |
| TGCGTAGCAGATCTGCATCT+AGG | 0.616314 | 2.4:-20520042 | MS.gene059726:CDS |
| AGGTTAGGCAGCATATGGCT+AGG | 0.618497 | 2.4:-20521263 | MS.gene059726:CDS |
| ATTGACACCGGAACAGCAAG+AGG | 0.621917 | 2.4:-20520248 | MS.gene059726:CDS |
| GCCGTTGGATGGATTATCTG+AGG | 0.624201 | 2.4:-20520839 | MS.gene059726:CDS |
| GTGAGAGATTGCTGAACCAG+AGG | 0.624481 | 2.4:-20520672 | MS.gene059726:CDS |
| ATCAAGTCATTGATACACCT+GGG | 0.625389 | 2.4:-20521071 | MS.gene059726:CDS |
| AGCAGATCTGCATCTAGGAA+AGG | 0.625927 | 2.4:-20520037 | MS.gene059726:CDS |
| TCTCCAGGAACAACTTCATG+TGG | 0.626458 | 2.4:+20519893 | None:intergenic |
| AAAGCAATTAAACTTGCGAA+GGG | 0.631135 | 2.4:-20519842 | MS.gene059726:CDS |
| CCACCCTATGTAGAATGTCA+GGG | 0.631460 | 2.4:+20520344 | None:intergenic |
| ATCTAGGAAAGGTCGGAAGA+GGG | 0.633227 | 2.4:-20520026 | MS.gene059726:CDS |
| AGAAACAAGAATGCCAAGCG+TGG | 0.633691 | 2.4:-20519806 | MS.gene059726:CDS |
| GCTTCATGTCCTCTATAACA+AGG | 0.634232 | 2.4:-20521475 | MS.gene059726:CDS |
| TAGCCTTTGTGGACAACAGT+TGG | 0.638716 | 2.4:+20521630 | None:intergenic |
| GATCTGCATCTAGGAAAGGT+CGG | 0.639204 | 2.4:-20520033 | MS.gene059726:CDS |
| GGATGAATGTCCCCAAGACG+AGG | 0.644458 | 2.4:+20521513 | None:intergenic |
| ACACCAACTGTTGTCCACAA+AGG | 0.647881 | 2.4:-20521633 | MS.gene059726:CDS |
| GTATTCTAATCCAACAACAT+CGG | 0.653178 | 2.4:-20520198 | MS.gene059726:CDS |
| GTATACTATTGCTCAGCAGG+CGG | 0.653456 | 2.4:-20520935 | MS.gene059726:CDS |
| AAGAGGGAGAGATCACCAGA+AGG | 0.653816 | 2.4:-20520010 | MS.gene059726:CDS |
| CGTTTCAAGGAAATTCGACA+AGG | 0.654192 | 2.4:-20520143 | MS.gene059726:CDS |
| TTAGCTTCCAAAACTGCCGG+GGG | 0.654804 | 2.4:+20520547 | None:intergenic |
| TCACAACAGAAAGAATGGGA+AGG | 0.666061 | 2.4:-20520111 | MS.gene059726:CDS |
| AGATGGAACTGAATTGACAC+CGG | 0.673997 | 2.4:-20520260 | MS.gene059726:CDS |
| CGATTGGTCATGGAGGCGAG+GGG | 0.686897 | 2.4:-20520768 | MS.gene059726:CDS |
| TGAGAGATTGCTGAACCAGA+GGG | 0.687755 | 2.4:-20520671 | MS.gene059726:CDS |
| GTTGGATGGATTATCTGAGG+AGG | 0.697358 | 2.4:-20520836 | MS.gene059726:CDS |
| AAGACTTCGATTGGTCATGG+AGG | 0.712504 | 2.4:-20520775 | MS.gene059726:CDS |
| GACTGAAGAAGGTGTGATTG+CGG | 0.713697 | 2.4:-20520710 | MS.gene059726:CDS |
| GATCTGGAGGAAGAAAATGG+AGG | 0.764738 | 2.4:-20520481 | MS.gene059726:CDS |
| CAATTTCAAGAAGATCACTG+TGG | 0.830107 | 2.4:-20521709 | MS.gene059726:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AAGCAACTTAACATAATCTT+TGG | + | chr2.4:20520052-20520071 | None:intergenic | 25.0% |
| ! | ATAATGCTTTCTCAAATTCA+TGG | + | chr2.4:20521000-20521019 | None:intergenic | 25.0% |
| ! | CTTTATCAACAAGATTACTA+GGG | - | chr2.4:20520269-20520288 | MS.gene059726:CDS | 25.0% |
| !! | TATGTTAAGTTGCTTAAGTA+TGG | - | chr2.4:20520057-20520076 | MS.gene059726:CDS | 25.0% |
| !!! | CTTTTCATGAAAATTAGTCT+GGG | + | chr2.4:20519884-20519903 | None:intergenic | 25.0% |
| !!! | TTTGAGAAAGCATTATATTC+TGG | - | chr2.4:20521004-20521023 | MS.gene059726:CDS | 25.0% |
| AAAGCAATTAAACTTGCGAA+GGG | - | chr2.4:20521599-20521618 | MS.gene059726:CDS | 30.0% | |
| AATACTGCTAGGAATCTTAT+TGG | - | chr2.4:20520018-20520037 | MS.gene059726:CDS | 30.0% | |
| ATAATATTCCGATCCTCAAA+CGG | + | chr2.4:20520408-20520427 | None:intergenic | 30.0% | |
| ATCAAAATAGTCCTGGTATT+TGG | + | chr2.4:20520219-20520238 | None:intergenic | 30.0% | |
| ATTCTGTTAATAGCCATAGA+AGG | + | chr2.4:20521380-20521399 | None:intergenic | 30.0% | |
| CCTTTATCAACAAGATTACT+AGG | - | chr2.4:20520268-20520287 | MS.gene059726:CDS | 30.0% | |
| GTATTCTAATCCAACAACAT+CGG | - | chr2.4:20521243-20521262 | MS.gene059726:CDS | 30.0% | |
| TGTTCTTCTTGGATATATCA+GGG | - | chr2.4:20520475-20520494 | MS.gene059726:CDS | 30.0% | |
| TTGTTCTTCTTGGATATATC+AGG | - | chr2.4:20520474-20520493 | MS.gene059726:CDS | 30.0% | |
| ! | AGATAATCTGCCAGAAATTT+TGG | - | chr2.4:20521046-20521065 | MS.gene059726:CDS | 30.0% |
| ! | ATACGGATTACAAGTATTTG+AGG | - | chr2.4:20520346-20520365 | MS.gene059726:CDS | 30.0% |
| ! | CCTAGTAATCTTGTTGATAA+AGG | + | chr2.4:20520271-20520290 | None:intergenic | 30.0% |
| ! | GCTTTTCATGAAAATTAGTC+TGG | + | chr2.4:20519885-20519904 | None:intergenic | 30.0% |
| ! | TCAACGAAATCTTTTCCATT+TGG | + | chr2.4:20519760-20519779 | None:intergenic | 30.0% |
| ! | TCTTTTTAATCCGATGTTGT+TGG | + | chr2.4:20521256-20521275 | None:intergenic | 30.0% |
| ! | TGTAATGATCCTTGTTATAG+AGG | + | chr2.4:20519978-20519997 | None:intergenic | 30.0% |
| !!! | GATGATGATTTTGAGATAGA+TGG | - | chr2.4:20521164-20521183 | MS.gene059726:CDS | 30.0% |
| AAGAGTTAGAAAGAGAGGAA+GGG | - | chr2.4:20521120-20521139 | MS.gene059726:CDS | 35.0% | |
| ATCAAGTCATTGATACACCT+GGG | - | chr2.4:20520370-20520389 | MS.gene059726:CDS | 35.0% | |
| CAAAGCAATTAAACTTGCGA+AGG | - | chr2.4:20521598-20521617 | MS.gene059726:CDS | 35.0% | |
| CAATTTCAAGAAGATCACTG+TGG | - | chr2.4:20519732-20519751 | MS.gene059726:CDS | 35.0% | |
| CAGTTCACAACAGAAAGAAT+GGG | - | chr2.4:20521326-20521345 | MS.gene059726:CDS | 35.0% | |
| CTGGTATTTGGATCAATTGA+AGG | + | chr2.4:20520207-20520226 | None:intergenic | 35.0% | |
| CTTCAATTGATCCAAATACC+AGG | - | chr2.4:20520205-20520224 | MS.gene059726:CDS | 35.0% | |
| CTTGTCGAATTTCCTTGAAA+CGG | + | chr2.4:20521300-20521319 | None:intergenic | 35.0% | |
| GTATCGTTGTAAGTGTTTGA+AGG | - | chr2.4:20520089-20520108 | MS.gene059726:CDS | 35.0% | |
| TATACAAGTGCTTCGGTTTA+AGG | + | chr2.4:20521685-20521704 | None:intergenic | 35.0% | |
| TATCAAGTCATTGATACACC+TGG | - | chr2.4:20520369-20520388 | MS.gene059726:CDS | 35.0% | |
| TGAAGCAGATCACCATAAAA+AGG | + | chr2.4:20519952-20519971 | None:intergenic | 35.0% | |
| TTGGTCAGATTAATACTGCT+AGG | - | chr2.4:20520007-20520026 | MS.gene059726:CDS | 35.0% | |
| TTGTGACCATCCAAAATTTC+TGG | + | chr2.4:20521059-20521078 | None:intergenic | 35.0% | |
| TTGTTGCACACAACAATCAA+AGG | + | chr2.4:20520570-20520589 | None:intergenic | 35.0% | |
| TTTCCAGTATACAAGTGCTT+CGG | + | chr2.4:20521692-20521711 | None:intergenic | 35.0% | |
| ! | AATCTGCCAGAAATTTTGGA+TGG | - | chr2.4:20521050-20521069 | MS.gene059726:CDS | 35.0% |
| ! | ATATTCTGGCTGATGATGAT+TGG | - | chr2.4:20521018-20521037 | MS.gene059726:CDS | 35.0% |
| ! | CTTTTCGCATGTAGAATTGT+CGG | + | chr2.4:20519852-20519871 | None:intergenic | 35.0% |
| !!! | ACCAGGACTATTTTGATTTG+TGG | - | chr2.4:20520222-20520241 | MS.gene059726:CDS | 35.0% |
| !!! | CCAGGACTATTTTGATTTGT+GGG | - | chr2.4:20520223-20520242 | MS.gene059726:CDS | 35.0% |
| AAAAACTGAGAAGGATCTGG+AGG | - | chr2.4:20520947-20520966 | MS.gene059726:CDS | 40.0% | |
| AAATCAACGACTGTCTGAAC+AGG | - | chr2.4:20520817-20520836 | MS.gene059726:CDS | 40.0% | |
| AAGATCACTGTGGTACCAAA+TGG | - | chr2.4:20519742-20519761 | MS.gene059726:CDS | 40.0% | |
| AAGGATCTGGAGGAAGAAAA+TGG | - | chr2.4:20520957-20520976 | MS.gene059726:CDS | 40.0% | |
| AGATGGAACTGAATTGACAC+CGG | - | chr2.4:20521181-20521200 | MS.gene059726:CDS | 40.0% | |
| AGCGGCAATATTGTTCTTCT+TGG | - | chr2.4:20520464-20520483 | MS.gene059726:CDS | 40.0% | |
| ATCTGAGGAGGATATGAAGT+TGG | - | chr2.4:20520617-20520636 | MS.gene059726:CDS | 40.0% | |
| ATTTCCTTGAAACGGTTGGT+CGG | + | chr2.4:20521292-20521311 | None:intergenic | 40.0% | |
| ATTTGTGGGTATCCGAATGT+CGG | - | chr2.4:20520237-20520256 | MS.gene059726:CDS | 40.0% | |
| CCCACAAATCAAAATAGTCC+TGG | + | chr2.4:20520226-20520245 | None:intergenic | 40.0% | |
| CGTTTCAAGGAAATTCGACA+AGG | - | chr2.4:20521298-20521317 | MS.gene059726:CDS | 40.0% | |
| GAAGAGTTAGAAAGAGAGGA+AGG | - | chr2.4:20521119-20521138 | MS.gene059726:CDS | 40.0% | |
| GACTTAGTGGTAAACGCATA+CGG | + | chr2.4:20520312-20520331 | None:intergenic | 40.0% | |
| GAGAAAAACTGAGAAGGATC+TGG | - | chr2.4:20520944-20520963 | MS.gene059726:CDS | 40.0% | |
| GATCATTACAAGCTTGCACT+TGG | - | chr2.4:20519988-20520007 | MS.gene059726:CDS | 40.0% | |
| GCAGTTCACAACAGAAAGAA+TGG | - | chr2.4:20521325-20521344 | MS.gene059726:CDS | 40.0% | |
| GCTTCATGTCCTCTATAACA+AGG | - | chr2.4:20519966-20519985 | MS.gene059726:CDS | 40.0% | |
| GGAGAAGAGAAAAACTGAGA+AGG | - | chr2.4:20520938-20520957 | MS.gene059726:CDS | 40.0% | |
| GTGAAATTGCATAGCCTTTG+TGG | + | chr2.4:20519825-20519844 | None:intergenic | 40.0% | |
| TAGAAAGAGAGGAAGGGTTA+AGG | - | chr2.4:20521126-20521145 | MS.gene059726:CDS | 40.0% | |
| TCACAACAGAAAGAATGGGA+AGG | - | chr2.4:20521330-20521349 | MS.gene059726:CDS | 40.0% | |
| TCATCTTAATCTCAACCCTC+TGG | + | chr2.4:20520788-20520807 | None:intergenic | 40.0% | |
| TCCTCAGATAATCCATCCAA+CGG | + | chr2.4:20520606-20520625 | None:intergenic | 40.0% | |
| TCGAATTTCCTTGAAACGGT+TGG | + | chr2.4:20521296-20521315 | None:intergenic | 40.0% | |
| TGACCCTGACATTCTACATA+GGG | - | chr2.4:20521094-20521113 | MS.gene059726:CDS | 40.0% | |
| TGTACTGTGCTTAAGAGGAT+TGG | - | chr2.4:20520132-20520151 | MS.gene059726:CDS | 40.0% | |
| TGTTCCAAATACGCCAAACT+CGG | + | chr2.4:20520159-20520178 | None:intergenic | 40.0% | |
| TTGACCCTGACATTCTACAT+AGG | - | chr2.4:20521093-20521112 | MS.gene059726:CDS | 40.0% | |
| TTGGATATATCAGGGTCTTG+TGG | - | chr2.4:20520483-20520502 | MS.gene059726:CDS | 40.0% | |
| ! | AAACCGAAGCACTTGTATAC+TGG | - | chr2.4:20521686-20521705 | MS.gene059726:CDS | 40.0% |
| ! | AAGAGGCTTTAGCTGAGATT+AGG | - | chr2.4:20521210-20521229 | MS.gene059726:CDS | 40.0% |
| ! | ATACACCTGGGATTTTGGAT+AGG | - | chr2.4:20520382-20520401 | MS.gene059726:CDS | 40.0% |
| ! | CATTGATACACCTGGGATTT+TGG | - | chr2.4:20520377-20520396 | MS.gene059726:CDS | 40.0% |
| ! | GGCATTCTTGTTTCTCTTCT+TGG | + | chr2.4:20521630-20521649 | None:intergenic | 40.0% |
| ! | GGGGACATTCATCCTTTTTA+TGG | - | chr2.4:20519937-20519956 | MS.gene059726:CDS | 40.0% |
| ! | TCTTTTGAGCAGAATCCCTA+AGG | + | chr2.4:20521577-20521596 | None:intergenic | 40.0% |
| ! | TGGATATATCAGGGTCTTGT+GGG | - | chr2.4:20520484-20520503 | MS.gene059726:CDS | 40.0% |
| ! | TTGAAGACTTCGATTGGTCA+TGG | - | chr2.4:20520663-20520682 | MS.gene059726:CDS | 40.0% |
| AAGGAACTCTTCCCGACATT+CGG | + | chr2.4:20520252-20520271 | None:intergenic | 45.0% | |
| ACACCAACTGTTGTCCACAA+AGG | - | chr2.4:20519808-20519827 | MS.gene059726:CDS | 45.0% | |
| ACCACTAAGTCGCTGTTTGT+GGG | - | chr2.4:20520321-20520340 | MS.gene059726:CDS | 45.0% | |
| AGAAACAAGAATGCCAAGCG+TGG | - | chr2.4:20521635-20521654 | MS.gene059726:CDS | 45.0% | |
| AGAAGGAAGAAACGATGGGA+TGG | - | chr2.4:20521448-20521467 | MS.gene059726:CDS | 45.0% | |
| AGCAGATCTGCATCTAGGAA+AGG | - | chr2.4:20521404-20521423 | MS.gene059726:CDS | 45.0% | |
| ATCCCATCGTTTCTTCCTTC+TGG | + | chr2.4:20521449-20521468 | None:intergenic | 45.0% | |
| ATCTAGGAAAGGTCGGAAGA+GGG | - | chr2.4:20521415-20521434 | MS.gene059726:CDS | 45.0% | |
| CAAGGAAATTCGACAAGGAC+AGG | - | chr2.4:20521303-20521322 | MS.gene059726:CDS | 45.0% | |
| CACCAGAAGGAAGAAACGAT+GGG | - | chr2.4:20521444-20521463 | MS.gene059726:CDS | 45.0% | |
| CAGGAACAACTTCATGTGGT+GGG | + | chr2.4:20521547-20521566 | None:intergenic | 45.0% | |
| CATGAAGTTGTTCCTGGAGA+AGG | - | chr2.4:20521551-20521570 | MS.gene059726:CDS | 45.0% | |
| CCACCCTATGTAGAATGTCA+GGG | + | chr2.4:20521100-20521119 | None:intergenic | 45.0% | |
| GATCTGCATCTAGGAAAGGT+CGG | - | chr2.4:20521408-20521427 | MS.gene059726:CDS | 45.0% | |
| GATCTGGAGGAAGAAAATGG+AGG | - | chr2.4:20520960-20520979 | MS.gene059726:CDS | 45.0% | |
| GGATGTGTACTGTGCTTAAG+AGG | - | chr2.4:20520127-20520146 | MS.gene059726:CDS | 45.0% | |
| GGTGGAAGAGTTAGAAAGAG+AGG | - | chr2.4:20521115-20521134 | MS.gene059726:CDS | 45.0% | |
| GTATACTATTGCTCAGCAGG+CGG | - | chr2.4:20520506-20520525 | MS.gene059726:CDS | 45.0% | |
| GTTTGAAGGTTGCTGCTCTT+GGG | - | chr2.4:20520103-20520122 | MS.gene059726:CDS | 45.0% | |
| TACCACTAAGTCGCTGTTTG+TGG | - | chr2.4:20520320-20520339 | MS.gene059726:CDS | 45.0% | |
| TAGCCTTTGTGGACAACAGT+TGG | + | chr2.4:20519814-20519833 | None:intergenic | 45.0% | |
| TCACCAGAAGGAAGAAACGA+TGG | - | chr2.4:20521443-20521462 | MS.gene059726:CDS | 45.0% | |
| TCCACCCTATGTAGAATGTC+AGG | + | chr2.4:20521101-20521120 | None:intergenic | 45.0% | |
| TCTCCAGGAACAACTTCATG+TGG | + | chr2.4:20521551-20521570 | None:intergenic | 45.0% | |
| TCTTGGGCTTGATCCTTCTA+TGG | - | chr2.4:20521364-20521383 | MS.gene059726:CDS | 45.0% | |
| TGAGAGATTGCTGAACCAGA+GGG | - | chr2.4:20520770-20520789 | MS.gene059726:CDS | 45.0% | |
| TGGGTATACTATTGCTCAGC+AGG | - | chr2.4:20520503-20520522 | MS.gene059726:CDS | 45.0% | |
| TGTTTGAAGGTTGCTGCTCT+TGG | - | chr2.4:20520102-20520121 | MS.gene059726:CDS | 45.0% | |
| TTCTTCAGTCAACGCACTCA+TGG | + | chr2.4:20520721-20520740 | None:intergenic | 45.0% | |
| TTTGTGGGTATCCGAATGTC+GGG | - | chr2.4:20520238-20520257 | MS.gene059726:CDS | 45.0% | |
| ! | AAGACTTCGATTGGTCATGG+AGG | - | chr2.4:20520666-20520685 | MS.gene059726:CDS | 45.0% |
| ! | ACGAGGAAACTCGTCGATTA+TGG | + | chr2.4:20519914-20519933 | None:intergenic | 45.0% |
| ! | AGGCTTTAGCTGAGATTAGG+AGG | - | chr2.4:20521213-20521232 | MS.gene059726:CDS | 45.0% |
| ! | CTTTAGCTTCCAAAACTGCC+GGG | + | chr2.4:20520899-20520918 | None:intergenic | 45.0% |
| ! | GACTGAAGAAGGTGTGATTG+CGG | - | chr2.4:20520731-20520750 | MS.gene059726:CDS | 45.0% |
| ! | GAGTTTGGCGTATTTGGAAC+AGG | - | chr2.4:20520158-20520177 | MS.gene059726:CDS | 45.0% |
| ! | GATTTTGGATAGGCCGTTTG+AGG | - | chr2.4:20520392-20520411 | MS.gene059726:CDS | 45.0% |
| ! | GCTTTAGCTTCCAAAACTGC+CGG | + | chr2.4:20520900-20520919 | None:intergenic | 45.0% |
| ! | TGGCGTATTTGGAACAGGTT+AGG | - | chr2.4:20520163-20520182 | MS.gene059726:CDS | 45.0% |
| ! | TTTAGCTTCCAAAACTGCCG+GGG | + | chr2.4:20520898-20520917 | None:intergenic | 45.0% |
| !! | ATGAGTGCGTTGACTGAAGA+AGG | - | chr2.4:20520720-20520739 | MS.gene059726:CDS | 45.0% |
| !! | GAAGCGTTGAAGACTTCGAT+TGG | - | chr2.4:20520657-20520676 | MS.gene059726:CDS | 45.0% |
| !! | GTTGGATGGATTATCTGAGG+AGG | - | chr2.4:20520605-20520624 | MS.gene059726:CDS | 45.0% |
| !! | TAAGAGGATTGGTCCGAGTT+TGG | - | chr2.4:20520143-20520162 | MS.gene059726:CDS | 45.0% |
| !! | TATACTGGAAAGCGCTCCAA+CGG | - | chr2.4:20521701-20521720 | MS.gene059726:CDS | 45.0% |
| AAAACTGCCGGGGGAATACA+CGG | + | chr2.4:20520888-20520907 | None:intergenic | 50.0% | |
| AACGGCCTATCCAAAATCCC+AGG | + | chr2.4:20520390-20520409 | None:intergenic | 50.0% | |
| AAGAGAGGAAGGGTTAAGGC+AGG | - | chr2.4:20521130-20521149 | MS.gene059726:CDS | 50.0% | |
| AAGAGGGAGAGATCACCAGA+AGG | - | chr2.4:20521431-20521450 | MS.gene059726:CDS | 50.0% | |
| ACCCACAAACAGCGACTTAG+TGG | + | chr2.4:20520325-20520344 | None:intergenic | 50.0% | |
| AGGTTAGGCAGCATATGGCT+AGG | - | chr2.4:20520178-20520197 | MS.gene059726:CDS | 50.0% | |
| ATCACTGTCTCGTTCCAGGT+CGG | - | chr2.4:20521514-20521533 | MS.gene059726:CDS | 50.0% | |
| ATCGACGAGTTTCCTCGTCT+TGG | - | chr2.4:20519916-20519935 | MS.gene059726:CDS | 50.0% | |
| ATTGACACCGGAACAGCAAG+AGG | - | chr2.4:20521193-20521212 | MS.gene059726:CDS | 50.0% | |
| CATCTAGGAAAGGTCGGAAG+AGG | - | chr2.4:20521414-20521433 | MS.gene059726:CDS | 50.0% | |
| CCACCACATGAAGTTGTTCC+TGG | - | chr2.4:20521545-20521564 | MS.gene059726:CDS | 50.0% | |
| CCAGGAACAACTTCATGTGG+TGG | + | chr2.4:20521548-20521567 | None:intergenic | 50.0% | |
| CCCTGACATTCTACATAGGG+TGG | - | chr2.4:20521097-20521116 | MS.gene059726:CDS | 50.0% | |
| CTGGTTCAGCAATCTCTCAC+AGG | + | chr2.4:20520769-20520788 | None:intergenic | 50.0% | |
| GGAACAGGTTAGGCAGCATA+TGG | - | chr2.4:20520173-20520192 | MS.gene059726:CDS | 50.0% | |
| GTAGATCACTGTCTCGTTCC+AGG | - | chr2.4:20521510-20521529 | MS.gene059726:CDS | 50.0% | |
| GTCGCTGTTTGTGGGTCATA+CGG | - | chr2.4:20520329-20520348 | MS.gene059726:CDS | 50.0% | |
| GTGAGAGATTGCTGAACCAG+AGG | - | chr2.4:20520769-20520788 | MS.gene059726:CDS | 50.0% | |
| TACACGGAGGTCTTTCCTTC+TGG | + | chr2.4:20520872-20520891 | None:intergenic | 50.0% | |
| TCCTTCTGGTCACGTGGTTT+CGG | + | chr2.4:20520858-20520877 | None:intergenic | 50.0% | |
| TCGACGAGTTTCCTCGTCTT+GGG | - | chr2.4:20519917-20519936 | MS.gene059726:CDS | 50.0% | |
| TCTATCAGCTTCTCCACGCT+TGG | + | chr2.4:20521651-20521670 | None:intergenic | 50.0% | |
| TGCGTAGCAGATCTGCATCT+AGG | - | chr2.4:20521399-20521418 | MS.gene059726:CDS | 50.0% | |
| TGCTCTTGCGCATTTGAGAG+CGG | - | chr2.4:20520446-20520465 | MS.gene059726:CDS | 50.0% | |
| TGGATAGGCCGTTTGAGGAT+CGG | - | chr2.4:20520397-20520416 | MS.gene059726:CDS | 50.0% | |
| TGGTCCGAGTTTGGCGTATT+TGG | - | chr2.4:20520152-20520171 | MS.gene059726:CDS | 50.0% | |
| TGTTCCTGGAGAAGGCCTTA+GGG | - | chr2.4:20521559-20521578 | MS.gene059726:CDS | 50.0% | |
| TTAGCTTCCAAAACTGCCGG+GGG | + | chr2.4:20520897-20520916 | None:intergenic | 50.0% | |
| TTGTTCCTGGAGAAGGCCTT+AGG | - | chr2.4:20521558-20521577 | MS.gene059726:CDS | 50.0% | |
| ! | GAACAACTTCATGTGGTGGG+CGG | + | chr2.4:20521544-20521563 | None:intergenic | 50.0% |
| ! | GAGGAAGAAAATGGAGGTGC+TGG | - | chr2.4:20520966-20520985 | MS.gene059726:CDS | 50.0% |
| !! | AACAACTTCATGTGGTGGGC+GGG | + | chr2.4:20521543-20521562 | None:intergenic | 50.0% |
| !! | ACTGATTTGCAGCCGTTGGA+TGG | - | chr2.4:20520591-20520610 | MS.gene059726:CDS | 50.0% |
| !! | CAAGACTGATTTGCAGCCGT+TGG | - | chr2.4:20520587-20520606 | MS.gene059726:CDS | 50.0% |
| !! | CTGAGACGCTGTTTCTTGCT+AGG | + | chr2.4:20521491-20521510 | None:intergenic | 50.0% |
| !! | GCCGTTGGATGGATTATCTG+AGG | - | chr2.4:20520602-20520621 | MS.gene059726:CDS | 50.0% |
| !! | GCTAAAGCCTCTTGCTGTTC+CGG | + | chr2.4:20521203-20521222 | None:intergenic | 50.0% |
| AAGACCTCCGTGTATTCCCC+CGG | - | chr2.4:20520878-20520897 | MS.gene059726:CDS | 55.0% | |
| AGAGCCGACCAACCGTTTCA+AGG | - | chr2.4:20521285-20521304 | MS.gene059726:CDS | 55.0% | |
| AGCTAAGCAAGCAGCTGCTG+AGG | - | chr2.4:20520917-20520936 | MS.gene059726:CDS | 55.0% | |
| CGACGAGTTTCCTCGTCTTG+GGG | - | chr2.4:20519918-20519937 | MS.gene059726:CDS | 55.0% | |
| GAAGGCAGCTGTCGTCTCTT+GGG | - | chr2.4:20521348-20521367 | MS.gene059726:CDS | 55.0% | |
| GAATCCCTAAGGCCTTCTCC+AGG | + | chr2.4:20521566-20521585 | None:intergenic | 55.0% | |
| GCTCCAACGGAAAGACAGAC+AGG | - | chr2.4:20521714-20521733 | MS.gene059726:CDS | 55.0% | |
| GGATGAATGTCCCCAAGACG+AGG | + | chr2.4:20519931-20519950 | None:intergenic | 55.0% | |
| GGTCTTTCCTTCTGGTCACG+TGG | + | chr2.4:20520864-20520883 | None:intergenic | 55.0% | |
| TCCGAAACCACGTGACCAGA+AGG | - | chr2.4:20520854-20520873 | MS.gene059726:CDS | 55.0% | |
| TGAAGGTTGCTGCTCTTGGG+AGG | - | chr2.4:20520106-20520125 | MS.gene059726:CDS | 55.0% | |
| ! | GTGTATTCCCCCGGCAGTTT+TGG | - | chr2.4:20520887-20520906 | MS.gene059726:CDS | 55.0% |
| ! | TCGATTGGTCATGGAGGCGA+GGG | - | chr2.4:20520672-20520691 | MS.gene059726:CDS | 55.0% |
| ! | TTCGATTGGTCATGGAGGCG+AGG | - | chr2.4:20520671-20520690 | MS.gene059726:CDS | 55.0% |
| GCGCCTGTCTGTCTTTCCGT+TGG | + | chr2.4:20521720-20521739 | None:intergenic | 60.0% | |
| GGAAGGCAGCTGTCGTCTCT+TGG | - | chr2.4:20521347-20521366 | MS.gene059726:CDS | 60.0% | |
| GGAAGGGTTAAGGCAGGCAG+AGG | - | chr2.4:20521136-20521155 | MS.gene059726:CDS | 60.0% | |
| ! | CGATTGGTCATGGAGGCGAG+GGG | - | chr2.4:20520673-20520692 | MS.gene059726:CDS | 60.0% |
| ACTGCCGGGGGAATACACGG+AGG | + | chr2.4:20520885-20520904 | None:intergenic | 65.0% | |
| ! | TGGTGGGCGGGAGACCGACC+TGG | + | chr2.4:20521531-20521550 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 20519721 | 20521742 | 20519721 | ID=MS.gene059726 |
| chr2.4 | mRNA | 20519721 | 20521742 | 20519721 | ID=MS.gene059726.t1;Parent=MS.gene059726 |
| chr2.4 | exon | 20519721 | 20521742 | 20519721 | ID=MS.gene059726.t1.exon1;Parent=MS.gene059726.t1 |
| chr2.4 | CDS | 20519721 | 20521742 | 20519721 | ID=cds.MS.gene059726.t1;Parent=MS.gene059726.t1 |
| Gene Sequence |
| Protein sequence |
