Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene77476.t1 | XP_024633428.1 | 92 | 1249 | 65 | 3 | 1 | 1214 | 1 | 1249 | 0.00E+00 | 2265.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene77476.t1 | Q7Y1C4 | 43.4 | 1242 | 585 | 28 | 1 | 1214 | 1 | 1152 | 1.8e-258 | 894.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene77476.t1 | G7J9J4 | 91.7 | 1254 | 64 | 4 | 1 | 1214 | 1 | 1254 | 0.0e+00 | 2260.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049397 | MS.gene77476 | 0.808564 | 2.91E-50 | -1.69E-46 |
MS.gene049989 | MS.gene77476 | 0.856413 | 3.27E-62 | -1.69E-46 |
MS.gene050297 | MS.gene77476 | 0.815609 | 8.47E-52 | -1.69E-46 |
MS.gene050648 | MS.gene77476 | 0.804384 | 2.22E-49 | -1.69E-46 |
MS.gene051629 | MS.gene77476 | 0.822878 | 1.87E-53 | -1.69E-46 |
MS.gene051816 | MS.gene77476 | 0.80151 | 8.70E-49 | -1.69E-46 |
MS.gene052367 | MS.gene77476 | 0.821144 | 4.72E-53 | -1.69E-46 |
MS.gene053348 | MS.gene77476 | 0.84043 | 8.74E-58 | -1.69E-46 |
MS.gene053416 | MS.gene77476 | 0.835614 | 1.51E-56 | -1.69E-46 |
MS.gene053417 | MS.gene77476 | 0.828237 | 1.01E-54 | -1.69E-46 |
MS.gene053929 | MS.gene77476 | 0.80823 | 3.43E-50 | -1.69E-46 |
MS.gene054885 | MS.gene77476 | 0.801166 | 1.02E-48 | -1.69E-46 |
MS.gene055411 | MS.gene77476 | 0.809635 | 1.72E-50 | -1.69E-46 |
MS.gene056041 | MS.gene77476 | 0.832337 | 1.00E-55 | -1.69E-46 |
MS.gene05640 | MS.gene77476 | 0.816041 | 6.78E-52 | -1.69E-46 |
MS.gene056526 | MS.gene77476 | 0.849323 | 3.48E-60 | -1.69E-46 |
MS.gene058196 | MS.gene77476 | 0.814956 | 1.18E-51 | -1.69E-46 |
MS.gene058197 | MS.gene77476 | 0.814001 | 1.92E-51 | -1.69E-46 |
MS.gene058198 | MS.gene77476 | 0.808874 | 2.50E-50 | -1.69E-46 |
MS.gene058827 | MS.gene77476 | 0.817422 | 3.32E-52 | -1.69E-46 |
MS.gene059300 | MS.gene77476 | 0.827786 | 1.29E-54 | -1.69E-46 |
MS.gene059553 | MS.gene77476 | 0.835483 | 1.63E-56 | -1.69E-46 |
MS.gene060473 | MS.gene77476 | 0.860148 | 2.53E-63 | -1.69E-46 |
MS.gene060565 | MS.gene77476 | 0.864393 | 1.26E-64 | -1.69E-46 |
MS.gene06057 | MS.gene77476 | 0.80221 | 6.25E-49 | -1.69E-46 |
MS.gene06093 | MS.gene77476 | 0.821825 | 3.29E-53 | -1.69E-46 |
MS.gene061260 | MS.gene77476 | 0.842487 | 2.51E-58 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene77476.t1 | MTR_3g083250 | 91.707 | 1254 | 64 | 4 | 1 | 1214 | 1 | 1254 | 0.0 | 2321 |
MS.gene77476.t1 | MTR_0191s0030 | 73.447 | 821 | 147 | 6 | 256 | 1058 | 41 | 808 | 0.0 | 1189 |
MS.gene77476.t1 | MTR_0191s0030 | 41.294 | 201 | 84 | 6 | 68 | 265 | 1 | 170 | 2.92e-26 | 117 |
MS.gene77476.t1 | MTR_6g033115 | 76.489 | 638 | 105 | 5 | 545 | 1178 | 4 | 600 | 0.0 | 982 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene77476.t1 | AT5G01630 | 52.345 | 917 | 394 | 14 | 319 | 1214 | 258 | 1152 | 0.0 | 922 |
MS.gene77476.t1 | AT4G00020 | 51.254 | 917 | 400 | 14 | 319 | 1214 | 258 | 1148 | 0.0 | 908 |
MS.gene77476.t1 | AT4G00020 | 51.570 | 892 | 387 | 13 | 319 | 1191 | 258 | 1123 | 0.0 | 891 |
MS.gene77476.t1 | AT4G00020 | 49.622 | 925 | 399 | 17 | 319 | 1212 | 258 | 1146 | 0.0 | 857 |
MS.gene77476.t1 | AT4G00020 | 51.166 | 858 | 370 | 14 | 319 | 1153 | 258 | 1089 | 0.0 | 837 |
MS.gene77476.t1 | AT4G00020 | 51.669 | 749 | 320 | 12 | 319 | 1048 | 258 | 983 | 0.0 | 742 |
Find 292 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGGTATTGATTTCCGATTAT+TGG | 0.177850 | 3.2:-72071249 | None:intergenic |
AATATAACTCACATTTAATT+TGG | 0.178578 | 3.2:-72070449 | None:intergenic |
GAGAAAGCTTTGAAAGATTC+TGG | 0.189705 | 3.2:+72070564 | MS.gene77476:CDS |
GGGAGGTCGTTATCTATTTC+TGG | 0.198566 | 3.2:+72066002 | MS.gene77476:CDS |
GTTAGAGCAAAGACGTTATT+AGG | 0.201204 | 3.2:+72065291 | MS.gene77476:CDS |
CAATTATCCTCTGGTGCTTC+TGG | 0.202376 | 3.2:+72066754 | MS.gene77476:CDS |
CTGGCAGTTTGGAATTTAAT+TGG | 0.207082 | 3.2:-72065978 | None:intergenic |
ATTGCCTCATTTGCAGCTTA+TGG | 0.211304 | 3.2:+72065617 | MS.gene77476:CDS |
ATTGCCTCATTTGCAGCTTA+TGG | 0.211304 | 3.2:+72065839 | MS.gene77476:CDS |
ACAACAGATTGGAACTTAAT+TGG | 0.219435 | 3.2:-72065762 | None:intergenic |
AGTTTACTTCTTCACATAAA+TGG | 0.223688 | 3.2:+72068288 | MS.gene77476:CDS |
GATTTCCGATTATTGGAAAA+TGG | 0.239451 | 3.2:-72071242 | None:intergenic |
GCTTCTTGGTGATCCTGATT+TGG | 0.254490 | 3.2:+72066049 | MS.gene77476:CDS |
CTTCTTGGTGATCCTGATTT+GGG | 0.261549 | 3.2:+72066050 | MS.gene77476:CDS |
TGCCTCCCTGCTCTGATTCC+CGG | 0.270037 | 3.2:-72067822 | None:intergenic |
GACTCACCTGCTTCTGTGTT+GGG | 0.271516 | 3.2:-72070692 | None:intergenic |
TCAAGACGAACCTCGTTTAC+AGG | 0.275730 | 3.2:+72065383 | MS.gene77476:CDS |
GATTTGGGAGATTTCTTTGA+TGG | 0.299751 | 3.2:+72066065 | MS.gene77476:CDS |
CATATCTGCCATTAGGAATT+CGG | 0.300492 | 3.2:-72070389 | None:intergenic |
TGTAAAGAATGGGATATATT+CGG | 0.302175 | 3.2:-72068525 | None:intergenic |
TGACAATGGAACATCTAAAA+TGG | 0.304206 | 3.2:-72067975 | None:intergenic |
ACTACACGCAACCTCATAAA+TGG | 0.309834 | 3.2:-72070609 | None:intergenic |
TCCTTTGCATTAGAAGATAA+TGG | 0.317935 | 3.2:-72071092 | None:intergenic |
CAGGCTGCTTATTATTTGTA+TGG | 0.322115 | 3.2:-72066520 | None:intergenic |
AATGCAATAGATGATAGTTT+TGG | 0.322409 | 3.2:+72065204 | MS.gene77476:CDS |
AGGACCATACAAACCATATA+TGG | 0.322671 | 3.2:+72071858 | MS.gene77476:CDS |
GGTTCGCATATTTATGATTA+CGG | 0.330430 | 3.2:+72070316 | MS.gene77476:CDS |
ATCATTACAAATGGATTGTA+TGG | 0.332897 | 3.2:+72067457 | MS.gene77476:CDS |
TTACCTTTCTTTGTAAAGAA+TGG | 0.343658 | 3.2:-72068536 | None:intergenic |
TGATACCTTGAGGTTGAAAA+AGG | 0.344369 | 3.2:-72065072 | None:intergenic |
GGAATCAAATTTCAAATAAT+AGG | 0.344969 | 3.2:-72071906 | None:intergenic |
CCGTAGATCCGGCAAGGTTA+TGG | 0.348151 | 3.2:-72071608 | None:intergenic |
TTCTTGTTATACAAGGGTTT+CGG | 0.353305 | 3.2:-72066377 | None:intergenic |
GCAGGTTTATGCGGCTGGAA+TGG | 0.353377 | 3.2:+72068142 | MS.gene77476:CDS |
AAAACCTCAAGGGGTGAAAC+TGG | 0.358217 | 3.2:-72068166 | None:intergenic |
TGTCACCTGTCTGGCTGTAT+TGG | 0.358302 | 3.2:-72066989 | None:intergenic |
ATCCCATTCTTTACAAAGAA+AGG | 0.360000 | 3.2:+72068533 | MS.gene77476:CDS |
TAGCATCAGCAACCCATATA+TGG | 0.360952 | 3.2:-72071871 | None:intergenic |
AAAATTGTGCAACCAGATAT+TGG | 0.364051 | 3.2:+72065486 | MS.gene77476:CDS |
CCACTACGACTACCAATATC+TGG | 0.367849 | 3.2:-72065498 | None:intergenic |
AAACGCGCTAGGAGGCTTCT+TGG | 0.367921 | 3.2:+72066035 | MS.gene77476:CDS |
TAAAGTTGCTGGTCCACCTT+TGG | 0.369700 | 3.2:+72068444 | MS.gene77476:CDS |
TACCTTTCTTTGTAAAGAAT+GGG | 0.373115 | 3.2:-72068535 | None:intergenic |
GTCCCCAGAGGTAGAGATAT+TGG | 0.374012 | 3.2:-72066606 | None:intergenic |
TTGGATAGTGAAATGGATAT+CGG | 0.378756 | 3.2:-72066798 | None:intergenic |
ACGACCTCCCACTGGCAGTT+TGG | 0.385339 | 3.2:-72065989 | None:intergenic |
CAAATGGATTGTATGGAAAC+TGG | 0.386415 | 3.2:+72067464 | MS.gene77476:CDS |
CACTTCATTCTTGTTATACA+AGG | 0.388000 | 3.2:-72066384 | None:intergenic |
CTGCTCTGATTCCCGGTTTG+TGG | 0.390136 | 3.2:-72067815 | None:intergenic |
GTCACCTGTCTGGCTGTATT+GGG | 0.390519 | 3.2:-72066988 | None:intergenic |
CGGTAATTGTTATCGGCGTC+GGG | 0.391361 | 3.2:-72064929 | None:intergenic |
TTGCCACCGGTAATTGTTAT+CGG | 0.392866 | 3.2:-72064936 | None:intergenic |
GGAGAAGCATATGCAATTGC+AGG | 0.393974 | 3.2:+72070999 | MS.gene77476:CDS |
ATGGACTGTCTTAACGGTAT+TGG | 0.396758 | 3.2:-72066501 | None:intergenic |
ATTTGTATGGACTGTCTTAA+CGG | 0.397845 | 3.2:-72066507 | None:intergenic |
TGTTGTAGATAATATTGTTT+CGG | 0.407964 | 3.2:+72070273 | MS.gene77476:CDS |
CATGGAAGGAAGGGGAGGGG+TGG | 0.408337 | 3.2:-72065017 | None:intergenic |
CTTGTGCAGATCTGGGGAGC+AGG | 0.412599 | 3.2:+72068124 | MS.gene77476:intron |
GAATATTACTAACAACAGAT+TGG | 0.415489 | 3.2:-72065773 | None:intergenic |
TCAAAGAAATCTCCCAAATC+AGG | 0.416428 | 3.2:-72066062 | None:intergenic |
CCAATCAACCATAACCTTGC+CGG | 0.418238 | 3.2:+72071600 | MS.gene77476:CDS |
AATTCCTTGATGTGCATCCT+TGG | 0.419461 | 3.2:-72066817 | None:intergenic |
TGTTTGTAGGACAGAAGCTT+CGG | 0.420765 | 3.2:+72068020 | MS.gene77476:CDS |
GTAAAGAATGGGATATATTC+GGG | 0.420871 | 3.2:-72068524 | None:intergenic |
CCGGAGTCATATCTGCCATT+AGG | 0.422638 | 3.2:-72070396 | None:intergenic |
ATGAATCATGATCAAACAAT+GGG | 0.424139 | 3.2:-72071572 | None:intergenic |
AATGTGTCGATAAACTTTCC+TGG | 0.426300 | 3.2:-72071528 | None:intergenic |
CTCCGTGCTGTGTCAATAGA+TGG | 0.427383 | 3.2:-72067083 | None:intergenic |
TTATACAAGGGTTTCGGTCC+AGG | 0.427521 | 3.2:-72066371 | None:intergenic |
AATAATAAGCAGCCTGCTAG+TGG | 0.430845 | 3.2:+72066527 | MS.gene77476:CDS |
CAGGTTTATGCGGCTGGAAT+GGG | 0.431824 | 3.2:+72068143 | MS.gene77476:CDS |
GGGTCTTGAATCATTACAAA+TGG | 0.432801 | 3.2:+72067448 | MS.gene77476:CDS |
AGCTTCGCAACGAAGGTAAT+GGG | 0.433487 | 3.2:+72066279 | MS.gene77476:CDS |
CAACCCATATATGGTTTGTA+TGG | 0.434022 | 3.2:-72071862 | None:intergenic |
TAATCGACAGGTAAAGTTGC+TGG | 0.434418 | 3.2:+72068433 | MS.gene77476:intron |
AAGAAGGCATAGTAACAATC+TGG | 0.435277 | 3.2:+72070667 | MS.gene77476:CDS |
TTGTCAAAGCAACTGGCTGC+TGG | 0.435548 | 3.2:+72067992 | MS.gene77476:CDS |
CGGTTTAGTACCTCAAACTT+TGG | 0.436809 | 3.2:+72068492 | MS.gene77476:CDS |
ATTTCCAATATCTCTACCTC+TGG | 0.438122 | 3.2:+72066602 | MS.gene77476:CDS |
CCGACGCCGATAACAATTAC+CGG | 0.438369 | 3.2:+72064930 | MS.gene77476:CDS |
GCTTTGAAAGATTCTGGCCT+GGG | 0.439971 | 3.2:+72070570 | MS.gene77476:CDS |
ACCATTGGGCAGGGCATTGG+TGG | 0.442677 | 3.2:+72066472 | MS.gene77476:CDS |
CACAAACCGGGAATCAGAGC+AGG | 0.445691 | 3.2:+72067816 | MS.gene77476:CDS |
AGACTCACCTGCTTCTGTGT+TGG | 0.448135 | 3.2:-72070693 | None:intergenic |
TGCTATCCAGCTAGGTGTGC+TGG | 0.450035 | 3.2:+72067501 | MS.gene77476:CDS |
GCATTATCTGAGCCACAAAC+CGG | 0.451413 | 3.2:+72067803 | MS.gene77476:CDS |
CCGGCAAGGTTATGGTTGAT+TGG | 0.451913 | 3.2:-72071600 | None:intergenic |
TGTTCCATTGTCAAAGCAAC+TGG | 0.452238 | 3.2:+72067985 | MS.gene77476:CDS |
AAAACCATTGGGCAGGGCAT+TGG | 0.452394 | 3.2:+72066469 | MS.gene77476:CDS |
AAGCTTCGCAACGAAGGTAA+TGG | 0.453729 | 3.2:+72066278 | MS.gene77476:CDS |
TGGAACATATAGAGCTCATT+GGG | 0.454267 | 3.2:+72068308 | MS.gene77476:CDS |
CTGCCAGCTCCGTCAGAAGA+TGG | 0.455648 | 3.2:+72071954 | MS.gene77476:CDS |
GGCAAATAGACAGTCACAAA+TGG | 0.456805 | 3.2:+72070530 | MS.gene77476:intron |
ATGGAACATATAGAGCTCAT+TGG | 0.457747 | 3.2:+72068307 | MS.gene77476:CDS |
ATTGCAGGACTCATACCATT+TGG | 0.457860 | 3.2:+72071014 | MS.gene77476:CDS |
TTAGTACCTCAAACTTTGGC+AGG | 0.459938 | 3.2:+72068496 | MS.gene77476:CDS |
ATGTGATTGGGATTATTCTC+TGG | 0.460598 | 3.2:-72066200 | None:intergenic |
GCTCTGATAAAATTTCAAAC+TGG | 0.460753 | 3.2:+72065537 | MS.gene77476:CDS |
GGGGTGGGAATAGAAGTAGG+AGG | 0.461215 | 3.2:-72065001 | None:intergenic |
TTTGCAGCCTTCGAAACAAA+TGG | 0.462337 | 3.2:+72066244 | MS.gene77476:CDS |
TTTATGAGGTTGCGTGTAGT+TGG | 0.466003 | 3.2:+72070612 | MS.gene77476:CDS |
GAGTATCAGAAGGAAATAAC+TGG | 0.466519 | 3.2:+72070295 | MS.gene77476:CDS |
CAATGTAATTACCGTAGATC+CGG | 0.466584 | 3.2:-72071619 | None:intergenic |
CATACCATTTGGCTCTGATT+CGG | 0.466881 | 3.2:+72071025 | MS.gene77476:CDS |
GTAATTCCTGCCAAAGTTTG+AGG | 0.467704 | 3.2:-72068502 | None:intergenic |
GAGAAGTAACGCCATTTATG+AGG | 0.467933 | 3.2:+72070598 | MS.gene77476:CDS |
TTTAGTTGGTAGGTTGAACA+TGG | 0.468541 | 3.2:+72065680 | MS.gene77476:CDS |
GGTGGGAATAGAAGTAGGAG+GGG | 0.468575 | 3.2:-72064999 | None:intergenic |
ATGGAAGGAAGGGGAGGGGT+GGG | 0.469291 | 3.2:-72065016 | None:intergenic |
GGGGAGCAGGTTTATGCGGC+TGG | 0.469394 | 3.2:+72068137 | MS.gene77476:CDS |
TGCATCCTTGGATAGTGAAA+TGG | 0.470058 | 3.2:-72066805 | None:intergenic |
ATTGTTACTATGCCTTCTTT+AGG | 0.470118 | 3.2:-72070663 | None:intergenic |
ATTACCTGATGTCACCTGTC+TGG | 0.470613 | 3.2:-72066998 | None:intergenic |
GCTGCTGGAAGATTGTTTGT+AGG | 0.471023 | 3.2:+72068007 | MS.gene77476:CDS |
ATATCTGCCATTAGGAATTC+GGG | 0.471026 | 3.2:-72070388 | None:intergenic |
GAAAAGGTGTTGGGTATAGT+TGG | 0.472509 | 3.2:+72072098 | MS.gene77476:CDS |
CTTGATAGTGGTAGTGTTAG+TGG | 0.474341 | 3.2:+72065726 | MS.gene77476:CDS |
GAGGATGGAGAGTAAAATGA+TGG | 0.477162 | 3.2:+72068696 | MS.gene77476:CDS |
ATTAAATTCCAAACTGCCAG+TGG | 0.479529 | 3.2:+72065981 | MS.gene77476:CDS |
CCGGTAATTGTTATCGGCGT+CGG | 0.480036 | 3.2:-72064930 | None:intergenic |
AATAGAGAAACTCAAGGAAA+AGG | 0.481279 | 3.2:+72072082 | MS.gene77476:CDS |
TTAGTTGGTACGTTGAAGAA+TGG | 0.482066 | 3.2:+72065903 | MS.gene77476:CDS |
CGGAAATCAATACCATTGTC+AGG | 0.483234 | 3.2:+72071257 | MS.gene77476:CDS |
GTTTGTAGGACAGAAGCTTC+GGG | 0.483618 | 3.2:+72068021 | MS.gene77476:CDS |
AGCCCATCTTCTGACGGAGC+TGG | 0.484532 | 3.2:-72071957 | None:intergenic |
GATTTGGCTCAATTATCCTC+TGG | 0.484666 | 3.2:+72066745 | MS.gene77476:intron |
CACGTGGAAAACCATTGGGC+AGG | 0.486395 | 3.2:+72066462 | MS.gene77476:CDS |
TCATTTCAAAGTCCTTTAGT+TGG | 0.487907 | 3.2:+72065888 | MS.gene77476:CDS |
TGCAGAACCCGAATTCCTAA+TGG | 0.487970 | 3.2:+72070381 | MS.gene77476:CDS |
AGCAGCCTGCTAGTGGGAAA+AGG | 0.487997 | 3.2:+72066534 | MS.gene77476:CDS |
AGCTTTGAAAGATTCTGGCC+TGG | 0.488036 | 3.2:+72070569 | MS.gene77476:CDS |
AAACTCAAGGAAAAGGTGTT+GGG | 0.490315 | 3.2:+72072089 | MS.gene77476:CDS |
GCTCATTGGGCAGATCGGTT+AGG | 0.491199 | 3.2:+72068321 | MS.gene77476:CDS |
AAAGTTACTATTTCTTCTAA+CGG | 0.491582 | 3.2:+72065264 | MS.gene77476:CDS |
GCCATTATCTTCTAATGCAA+AGG | 0.497976 | 3.2:+72071091 | MS.gene77476:CDS |
CCATAACCTTGCCGGATCTA+CGG | 0.498113 | 3.2:+72071608 | MS.gene77476:CDS |
GGAGGGGTGGGAATAGAAGT+AGG | 0.501265 | 3.2:-72065004 | None:intergenic |
CAATGGGGAGCAAAAGCAAA+TGG | 0.502054 | 3.2:-72071556 | None:intergenic |
TTCTGAGGTGAGAACACTGT+GGG | 0.503240 | 3.2:-72071928 | None:intergenic |
GAAAATTCCATTTGTTTCGA+AGG | 0.503805 | 3.2:-72066251 | None:intergenic |
GGATTCACGTGGAAAACCAT+TGG | 0.504425 | 3.2:+72066457 | MS.gene77476:CDS |
GAAACTCAAGGAAAAGGTGT+TGG | 0.504991 | 3.2:+72072088 | MS.gene77476:CDS |
ATTTGTTGTGCATGTGGGAA+AGG | 0.506609 | 3.2:+72071434 | MS.gene77476:CDS |
GAATTTCTTACTTGGAAAGT+GGG | 0.507846 | 3.2:-72071292 | None:intergenic |
GTGTCATTTGATGTACCAAA+GGG | 0.509649 | 3.2:-72066178 | None:intergenic |
TGCTTCTGGACTCAAAAGAA+AGG | 0.512413 | 3.2:+72066768 | MS.gene77476:CDS |
TTAAATTTCTTAGCATTCTG+AGG | 0.512782 | 3.2:-72065351 | None:intergenic |
GGAATTTCTTACTTGGAAAG+TGG | 0.513998 | 3.2:-72071293 | None:intergenic |
TTAAAAGTTGAATTAACTGA+TGG | 0.514214 | 3.2:+72067845 | MS.gene77476:CDS |
CTGGAACCCAACACAGAAGC+AGG | 0.516002 | 3.2:+72070686 | MS.gene77476:CDS |
TTCTCCCAATACAGCCAGAC+AGG | 0.517074 | 3.2:+72066984 | MS.gene77476:CDS |
TTGGGAGATTTCTTTGATGG+TGG | 0.517505 | 3.2:+72066068 | MS.gene77476:CDS |
ACAGCCAGACAGGTGACATC+AGG | 0.518455 | 3.2:+72066994 | MS.gene77476:CDS |
GCTAGTGGGAAAAGGAGAAT+AGG | 0.518525 | 3.2:+72066542 | MS.gene77476:CDS |
GGCTAAGATATATAAGATGC+TGG | 0.518921 | 3.2:+72070351 | MS.gene77476:CDS |
CAGGTGACATCAGGTAATGC+AGG | 0.519570 | 3.2:+72067003 | MS.gene77476:CDS |
ACTTTGAAACGACGCAGCAC+TGG | 0.520218 | 3.2:-72065427 | None:intergenic |
ACCATCAAGAAAATTCTTGA+GGG | 0.521881 | 3.2:+72067707 | MS.gene77476:CDS |
GGGTGGGAATAGAAGTAGGA+GGG | 0.522833 | 3.2:-72065000 | None:intergenic |
GCAAAAGAACTAAGTTGCTC+CGG | 0.523062 | 3.2:-72070415 | None:intergenic |
ATCATGAATGGGTTACAGCC+AGG | 0.525474 | 3.2:+72071510 | MS.gene77476:CDS |
CTATCCATAAGCTGCAAATG+AGG | 0.526428 | 3.2:-72065621 | None:intergenic |
CTATCCATAAGCTGCAAATG+AGG | 0.526428 | 3.2:-72065843 | None:intergenic |
TGGATAGTGAAATGGATATC+GGG | 0.526457 | 3.2:-72066797 | None:intergenic |
GCAGCCAGTTGCTTTGACAA+TGG | 0.526991 | 3.2:-72067989 | None:intergenic |
GTACATGGAAGGAAGGGGAG+GGG | 0.527310 | 3.2:-72065020 | None:intergenic |
CAGAGAGTCATCATTGAAGA+AGG | 0.529558 | 3.2:-72067740 | None:intergenic |
TTTATGCATTTGAAAGCCAA+AGG | 0.530660 | 3.2:-72068460 | None:intergenic |
GATTCACGTGGAAAACCATT+GGG | 0.530690 | 3.2:+72066458 | MS.gene77476:CDS |
CTGATCATGTGCTTGACAGT+GGG | 0.531781 | 3.2:+72067780 | MS.gene77476:CDS |
CAACGAGATAAGCCTAAAGA+AGG | 0.531883 | 3.2:+72070651 | MS.gene77476:CDS |
AACAGAGGAAGTGATTGTGC+TGG | 0.533610 | 3.2:-72066126 | None:intergenic |
AAGTTGAATTAACTGATGGA+TGG | 0.535731 | 3.2:+72067849 | MS.gene77476:CDS |
TTCAAAGTCCTTTAGTTGGT+AGG | 0.535790 | 3.2:+72065670 | MS.gene77476:CDS |
TGGCTCTGATAGTAATGGTA+TGG | 0.536135 | 3.2:+72067044 | MS.gene77476:CDS |
GTGGGAATAGAAGTAGGAGG+GGG | 0.536151 | 3.2:-72064998 | None:intergenic |
TTTGTTTCGAAGGCTGCAAA+GGG | 0.537403 | 3.2:-72066241 | None:intergenic |
TGGGCCAGTTTCACCCCTTG+AGG | 0.537797 | 3.2:+72068162 | MS.gene77476:CDS |
CATTACTATCAGAGCCATCA+TGG | 0.538675 | 3.2:-72067038 | None:intergenic |
CATGATGGCTCTGATAGTAA+TGG | 0.539102 | 3.2:+72067039 | MS.gene77476:CDS |
CTTGTATGGCGCTAGACGCT+CGG | 0.539469 | 3.2:+72070249 | MS.gene77476:intron |
CAAGTCAGCAAAAGAAGCAA+TGG | 0.541240 | 3.2:+72071466 | MS.gene77476:CDS |
ACTGATGGATCCATCATGAA+TGG | 0.542358 | 3.2:+72071498 | MS.gene77476:CDS |
TGATGGAGCTGCACAATCAA+AGG | 0.543075 | 3.2:+72068713 | MS.gene77476:CDS |
TGTTGCATTTGTTGTGCATG+TGG | 0.544406 | 3.2:+72071428 | MS.gene77476:CDS |
TCAAATAAGCTTCGCAACGA+AGG | 0.544748 | 3.2:+72066272 | MS.gene77476:CDS |
ATTTGTTTCGAAGGCTGCAA+AGG | 0.544759 | 3.2:-72066242 | None:intergenic |
GGACCATACAAACCATATAT+GGG | 0.545077 | 3.2:+72071859 | MS.gene77476:CDS |
TTCTTCAACGTACCAACTAA+AGG | 0.545451 | 3.2:-72065900 | None:intergenic |
TTTCCAATATCTCTACCTCT+GGG | 0.546058 | 3.2:+72066603 | MS.gene77476:CDS |
TGTTGTAATATCAGAGAGGA+TGG | 0.546484 | 3.2:+72068681 | MS.gene77476:CDS |
TTAGCACCACCACCACTACC+TGG | 0.547242 | 3.2:-72065948 | None:intergenic |
TATGAAAGAGAAGTGAATCA+TGG | 0.547598 | 3.2:+72067674 | MS.gene77476:CDS |
GCAAGGTTATGGTTGATTGG+TGG | 0.548799 | 3.2:-72071597 | None:intergenic |
GTGCAACCAGGTAGTGGTGG+TGG | 0.549195 | 3.2:+72065942 | MS.gene77476:CDS |
AAATTTGTGCAACCAGGTAG+TGG | 0.550143 | 3.2:+72065936 | MS.gene77476:CDS |
AATGAATCATGATCAAACAA+TGG | 0.551098 | 3.2:-72071573 | None:intergenic |
GAAGATCGTACATGGAAGGA+AGG | 0.551575 | 3.2:-72065027 | None:intergenic |
TATGATTACGGCAATAGCGA+AGG | 0.551854 | 3.2:+72070328 | MS.gene77476:CDS |
ATGTTCAACCTACCAACTAA+AGG | 0.553197 | 3.2:-72065678 | None:intergenic |
ATGGGCTAGCAATTCGAGCT+TGG | 0.554921 | 3.2:+72071973 | MS.gene77476:CDS |
AAGATCGTACATGGAAGGAA+GGG | 0.555599 | 3.2:-72065026 | None:intergenic |
GTAGAGATATTGGAAATTCG+AGG | 0.556021 | 3.2:-72066596 | None:intergenic |
TCTGATCATGTGCTTGACAG+TGG | 0.559826 | 3.2:+72067779 | MS.gene77476:CDS |
TCGTTTCAAAGTCCTTTAGT+TGG | 0.562899 | 3.2:+72065666 | MS.gene77476:CDS |
AAAGTTGTACAACTTGATAG+TGG | 0.562966 | 3.2:+72065714 | MS.gene77476:CDS |
ATCTGGGGAGCAGGTTTATG+CGG | 0.563462 | 3.2:+72068133 | MS.gene77476:CDS |
TGGTAGTGTTAGTGGTGCTA+AGG | 0.563632 | 3.2:+72065734 | MS.gene77476:CDS |
GATATCCATTTCACTATCCA+AGG | 0.565174 | 3.2:+72066800 | MS.gene77476:CDS |
GCGTTACTTCTCTGTCTCCC+AGG | 0.565373 | 3.2:-72070587 | None:intergenic |
CTGATGGATCCATCATGAAT+GGG | 0.565485 | 3.2:+72071499 | MS.gene77476:CDS |
TGCCAGCTCCGTCAGAAGAT+GGG | 0.565816 | 3.2:+72071955 | MS.gene77476:CDS |
TACCATCAAGAAAATTCTTG+AGG | 0.566360 | 3.2:+72067706 | MS.gene77476:CDS |
CGTACATGGAAGGAAGGGGA+GGG | 0.566520 | 3.2:-72065021 | None:intergenic |
ATGATTACGGCAATAGCGAA+GGG | 0.568939 | 3.2:+72070329 | MS.gene77476:CDS |
TCCACCAATGCCCTGCCCAA+TGG | 0.570333 | 3.2:-72066473 | None:intergenic |
GTTGCATTTGTTGTGCATGT+GGG | 0.571683 | 3.2:+72071429 | MS.gene77476:CDS |
CATAAAAGTAGCAAAGCTCC+TGG | 0.572073 | 3.2:+72066353 | MS.gene77476:CDS |
TGGCTGTAACCCATTCATGA+TGG | 0.573322 | 3.2:-72071508 | None:intergenic |
TGCTTGAGGAACTGAAGTAC+AGG | 0.575597 | 3.2:+72067547 | MS.gene77476:CDS |
CATTATCTGAGCCACAAACC+GGG | 0.576494 | 3.2:+72067804 | MS.gene77476:CDS |
GTCCTTCACTTGCAGACTAG+AGG | 0.577647 | 3.2:+72071050 | MS.gene77476:CDS |
AATTGTTATCGGCGTCGGGG+AGG | 0.578824 | 3.2:-72064925 | None:intergenic |
ATCCTCTAGTCTGCAAGTGA+AGG | 0.580814 | 3.2:-72071052 | None:intergenic |
CTTGTATAACAAGAATGAAG+TGG | 0.581521 | 3.2:+72066385 | MS.gene77476:CDS |
ATATTCCTTGTGCAGATCTG+GGG | 0.583597 | 3.2:+72068118 | MS.gene77476:intron |
AGAAGATAATGGCAACCACT+TGG | 0.584421 | 3.2:-72071081 | None:intergenic |
ATTGGTAGTCGTAGTGGTGT+TGG | 0.584800 | 3.2:+72065504 | MS.gene77476:CDS |
TATTGTTTCGGAGTATCAGA+AGG | 0.586541 | 3.2:+72070285 | MS.gene77476:CDS |
AGATCGTACATGGAAGGAAG+GGG | 0.587741 | 3.2:-72065025 | None:intergenic |
TCGTACATGGAAGGAAGGGG+AGG | 0.589194 | 3.2:-72065022 | None:intergenic |
CTATCCAAGGATGCACATCA+AGG | 0.589712 | 3.2:+72066813 | MS.gene77476:CDS |
CCAGATATTGGTAGTCGTAG+TGG | 0.590325 | 3.2:+72065498 | MS.gene77476:CDS |
CGGAGCTGGCAGCATTTCTG+AGG | 0.590348 | 3.2:-72071943 | None:intergenic |
GACTGTATCAAACGTGCTTG+AGG | 0.593902 | 3.2:+72067533 | MS.gene77476:CDS |
AATAGATAACGACCTCCCAC+TGG | 0.595561 | 3.2:-72065997 | None:intergenic |
ATAATAAGCAGCCTGCTAGT+GGG | 0.598295 | 3.2:+72066528 | MS.gene77476:CDS |
GGTGTCATTTGATGTACCAA+AGG | 0.599924 | 3.2:-72066179 | None:intergenic |
GAGAGTAAATTTGTGCAACC+AGG | 0.600163 | 3.2:+72065930 | MS.gene77476:CDS |
CGTCGGAGTTGATTTGCCAC+CGG | 0.600580 | 3.2:-72064949 | None:intergenic |
ATGAGAGATGCTATCCAGCT+AGG | 0.600663 | 3.2:+72067493 | MS.gene77476:CDS |
ACGTGGAAAACCATTGGGCA+GGG | 0.603971 | 3.2:+72066463 | MS.gene77476:CDS |
TTAGTTGGTAGGTTGAACAT+GGG | 0.606230 | 3.2:+72065681 | MS.gene77476:CDS |
AGGAGAAGATCGTACATGGA+AGG | 0.606968 | 3.2:-72065031 | None:intergenic |
ATAGAGCTCATTGGGCAGAT+CGG | 0.606980 | 3.2:+72068316 | MS.gene77476:CDS |
ACATCCGAATCAGAGCCAAA+TGG | 0.607036 | 3.2:-72071029 | None:intergenic |
GAGAAGTGAATCATGGCCAC+CGG | 0.607775 | 3.2:+72067681 | MS.gene77476:CDS |
ATCCATCTATTGACACAGCA+CGG | 0.609149 | 3.2:+72067081 | MS.gene77476:CDS |
ATGCATTTGAAAGCCAAAGG+TGG | 0.609685 | 3.2:-72068457 | None:intergenic |
GTGATGCGTTGAAACGCGCT+AGG | 0.611592 | 3.2:+72066024 | MS.gene77476:CDS |
CCTTATATTAGGTTAAGCAG+TGG | 0.612044 | 3.2:+72068652 | MS.gene77476:intron |
ACTTCATTCTTGTTATACAA+GGG | 0.612276 | 3.2:-72066383 | None:intergenic |
ATGAAGGAGAAGATCGTACA+TGG | 0.614402 | 3.2:-72065035 | None:intergenic |
GGCTCTGATAGTAATGGTAT+GGG | 0.615727 | 3.2:+72067045 | MS.gene77476:CDS |
GCAGATAATAGAGAAACTCA+AGG | 0.622491 | 3.2:+72072076 | MS.gene77476:intron |
TTTGAGTCCAGAAGCACCAG+AGG | 0.625357 | 3.2:-72066761 | None:intergenic |
CATCAAGAAAATTCTTGAGG+GGG | 0.625750 | 3.2:+72067709 | MS.gene77476:CDS |
ATGCGTTGAAACGCGCTAGG+AGG | 0.627260 | 3.2:+72066027 | MS.gene77476:CDS |
GGTGTGAGGCGGAAGCATGA+AGG | 0.627960 | 3.2:-72065051 | None:intergenic |
AATAACATTTGAAGTGTCGT+CGG | 0.629896 | 3.2:-72064966 | None:intergenic |
GGAGCGTACATATTCCATGA+TGG | 0.630123 | 3.2:+72067024 | MS.gene77476:CDS |
CCATCAAGAAAATTCTTGAG+GGG | 0.633200 | 3.2:+72067708 | MS.gene77476:CDS |
CTATCTATTACCTGTAAACG+AGG | 0.635769 | 3.2:-72065393 | None:intergenic |
ATTGCTAGCCCATCTTCTGA+CGG | 0.636898 | 3.2:-72071963 | None:intergenic |
CCTAATGGCAGATATGACTC+CGG | 0.636920 | 3.2:+72070396 | MS.gene77476:CDS |
ATAGCGTCAGGAACTGTCAG+AGG | 0.638897 | 3.2:+72070977 | MS.gene77476:intron |
ACAAACCGGGAATCAGAGCA+GGG | 0.642447 | 3.2:+72067817 | MS.gene77476:CDS |
TAATTACCGTAGATCCGGCA+AGG | 0.642794 | 3.2:-72071614 | None:intergenic |
TCTTCAAGAATGGATTCACG+TGG | 0.644634 | 3.2:+72066446 | MS.gene77476:CDS |
TGATCATGTGCTTGACAGTG+GGG | 0.648137 | 3.2:+72067781 | MS.gene77476:CDS |
ACTCTCACTTCTTTCAACAG+AGG | 0.651704 | 3.2:-72066141 | None:intergenic |
TAGCGTCAGGAACTGTCAGA+GGG | 0.654518 | 3.2:+72070978 | MS.gene77476:intron |
AATTCCAAACTGCCAGTGGG+AGG | 0.664894 | 3.2:+72065985 | MS.gene77476:CDS |
TTAAATTCCAAACTGCCAGT+GGG | 0.666155 | 3.2:+72065982 | MS.gene77476:CDS |
TGATTACGGCAATAGCGAAG+GGG | 0.679687 | 3.2:+72070330 | MS.gene77476:CDS |
GTTGTGAATGAAAGTGATTG+TGG | 0.680825 | 3.2:+72066329 | MS.gene77476:CDS |
GGTAATTGTTATCGGCGTCG+GGG | 0.682486 | 3.2:-72064928 | None:intergenic |
TTCCAATATCTCTACCTCTG+GGG | 0.685159 | 3.2:+72066604 | MS.gene77476:CDS |
CTAGAGGATCTACTACCAAG+TGG | 0.692702 | 3.2:+72071066 | MS.gene77476:CDS |
GGATTGCATGAAGAAACTGT+TGG | 0.692759 | 3.2:+72065312 | MS.gene77476:CDS |
ATGTCACTCAGACCTGACAA+TGG | 0.698274 | 3.2:-72071269 | None:intergenic |
TTTGTGCAACCAGGTAGTGG+TGG | 0.698341 | 3.2:+72065939 | MS.gene77476:CDS |
TAAAGGACTTTGAAATGACG+CGG | 0.698771 | 3.2:-72065883 | None:intergenic |
GAATCGAAGAAATGTCAACA+TGG | 0.699408 | 3.2:+72064897 | None:intergenic |
TTGAACATCTTGGTCCCCAG+AGG | 0.717971 | 3.2:-72066618 | None:intergenic |
TTTCTGAGGTGAGAACACTG+TGG | 0.717998 | 3.2:-72071929 | None:intergenic |
TGAATCATGATCAAACAATG+GGG | 0.725399 | 3.2:-72071571 | None:intergenic |
ACGCCGATAACAATTACCGG+TGG | 0.728353 | 3.2:+72064933 | MS.gene77476:CDS |
AATCTGTTGTAATATCAGAG+AGG | 0.730566 | 3.2:+72068677 | MS.gene77476:CDS |
AACCGGGAATCAGAGCAGGG+AGG | 0.760357 | 3.2:+72067820 | MS.gene77476:CDS |
TCTGAGGTGAGAACACTGTG+GGG | 0.762439 | 3.2:-72071927 | None:intergenic |
TGTCATTTGATGTACCAAAG+GGG | 0.762624 | 3.2:-72066177 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.2 | gene | 72064908 | 72072136 | 72064908 | ID=MS.gene77476 |
chr3.2 | mRNA | 72064908 | 72072136 | 72064908 | ID=MS.gene77476.t1;Parent=MS.gene77476 |
chr3.2 | exon | 72064908 | 72065088 | 72064908 | ID=MS.gene77476.t1.exon1;Parent=MS.gene77476.t1 |
chr3.2 | CDS | 72064908 | 72065088 | 72064908 | ID=cds.MS.gene77476.t1;Parent=MS.gene77476.t1 |
chr3.2 | exon | 72065196 | 72066653 | 72065196 | ID=MS.gene77476.t1.exon2;Parent=MS.gene77476.t1 |
chr3.2 | CDS | 72065196 | 72066653 | 72065196 | ID=cds.MS.gene77476.t1;Parent=MS.gene77476.t1 |
chr3.2 | exon | 72066746 | 72066870 | 72066746 | ID=MS.gene77476.t1.exon3;Parent=MS.gene77476.t1 |
chr3.2 | CDS | 72066746 | 72066870 | 72066746 | ID=cds.MS.gene77476.t1;Parent=MS.gene77476.t1 |
chr3.2 | exon | 72066982 | 72067130 | 72066982 | ID=MS.gene77476.t1.exon4;Parent=MS.gene77476.t1 |
chr3.2 | CDS | 72066982 | 72067130 | 72066982 | ID=cds.MS.gene77476.t1;Parent=MS.gene77476.t1 |
chr3.2 | exon | 72067446 | 72067568 | 72067446 | ID=MS.gene77476.t1.exon5;Parent=MS.gene77476.t1 |
chr3.2 | CDS | 72067446 | 72067568 | 72067446 | ID=cds.MS.gene77476.t1;Parent=MS.gene77476.t1 |
chr3.2 | exon | 72067673 | 72067870 | 72067673 | ID=MS.gene77476.t1.exon6;Parent=MS.gene77476.t1 |
chr3.2 | CDS | 72067673 | 72067870 | 72067673 | ID=cds.MS.gene77476.t1;Parent=MS.gene77476.t1 |
chr3.2 | exon | 72067961 | 72068042 | 72067961 | ID=MS.gene77476.t1.exon7;Parent=MS.gene77476.t1 |
chr3.2 | CDS | 72067961 | 72068042 | 72067961 | ID=cds.MS.gene77476.t1;Parent=MS.gene77476.t1 |
chr3.2 | exon | 72068133 | 72068183 | 72068133 | ID=MS.gene77476.t1.exon8;Parent=MS.gene77476.t1 |
chr3.2 | CDS | 72068133 | 72068183 | 72068133 | ID=cds.MS.gene77476.t1;Parent=MS.gene77476.t1 |
chr3.2 | exon | 72068273 | 72068348 | 72068273 | ID=MS.gene77476.t1.exon9;Parent=MS.gene77476.t1 |
chr3.2 | CDS | 72068273 | 72068348 | 72068273 | ID=cds.MS.gene77476.t1;Parent=MS.gene77476.t1 |
chr3.2 | exon | 72068443 | 72068554 | 72068443 | ID=MS.gene77476.t1.exon10;Parent=MS.gene77476.t1 |
chr3.2 | CDS | 72068443 | 72068554 | 72068443 | ID=cds.MS.gene77476.t1;Parent=MS.gene77476.t1 |
chr3.2 | exon | 72068663 | 72068734 | 72068663 | ID=MS.gene77476.t1.exon11;Parent=MS.gene77476.t1 |
chr3.2 | CDS | 72068663 | 72068734 | 72068663 | ID=cds.MS.gene77476.t1;Parent=MS.gene77476.t1 |
chr3.2 | exon | 72070264 | 72070459 | 72070264 | ID=MS.gene77476.t1.exon12;Parent=MS.gene77476.t1 |
chr3.2 | CDS | 72070264 | 72070459 | 72070264 | ID=cds.MS.gene77476.t1;Parent=MS.gene77476.t1 |
chr3.2 | exon | 72070531 | 72070707 | 72070531 | ID=MS.gene77476.t1.exon13;Parent=MS.gene77476.t1 |
chr3.2 | CDS | 72070531 | 72070707 | 72070531 | ID=cds.MS.gene77476.t1;Parent=MS.gene77476.t1 |
chr3.2 | exon | 72070981 | 72071123 | 72070981 | ID=MS.gene77476.t1.exon14;Parent=MS.gene77476.t1 |
chr3.2 | CDS | 72070981 | 72071123 | 72070981 | ID=cds.MS.gene77476.t1;Parent=MS.gene77476.t1 |
chr3.2 | exon | 72071241 | 72071303 | 72071241 | ID=MS.gene77476.t1.exon15;Parent=MS.gene77476.t1 |
chr3.2 | CDS | 72071241 | 72071303 | 72071241 | ID=cds.MS.gene77476.t1;Parent=MS.gene77476.t1 |
chr3.2 | exon | 72071416 | 72071629 | 72071416 | ID=MS.gene77476.t1.exon16;Parent=MS.gene77476.t1 |
chr3.2 | CDS | 72071416 | 72071629 | 72071416 | ID=cds.MS.gene77476.t1;Parent=MS.gene77476.t1 |
chr3.2 | exon | 72071827 | 72071994 | 72071827 | ID=MS.gene77476.t1.exon17;Parent=MS.gene77476.t1 |
chr3.2 | CDS | 72071827 | 72071994 | 72071827 | ID=cds.MS.gene77476.t1;Parent=MS.gene77476.t1 |
chr3.2 | exon | 72072080 | 72072136 | 72072080 | ID=MS.gene77476.t1.exon18;Parent=MS.gene77476.t1 |
chr3.2 | CDS | 72072080 | 72072136 | 72072080 | ID=cds.MS.gene77476.t1;Parent=MS.gene77476.t1 |
Gene Sequence |
Protein sequence |