Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054885.t1 | XP_024626054.1 | 95.8 | 480 | 15 | 1 | 1 | 480 | 1 | 475 | 7.40E-215 | 756.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054885.t1 | Q8W4K5 | 64.1 | 493 | 146 | 13 | 3 | 477 | 10 | 489 | 2.6e-123 | 443.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054885.t1 | A0A396H4D3 | 95.8 | 480 | 15 | 1 | 1 | 480 | 1 | 475 | 5.3e-215 | 756.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051816 | MS.gene054885 | 0.811041 | 8.54E-51 | -1.69E-46 |
| MS.gene053173 | MS.gene054885 | 0.805378 | 1.37E-49 | -1.69E-46 |
| MS.gene053348 | MS.gene054885 | 0.814648 | 1.38E-51 | -1.69E-46 |
| MS.gene054593 | MS.gene054885 | 0.811022 | 8.62E-51 | -1.69E-46 |
| MS.gene054885 | MS.gene055308 | 0.817802 | 2.73E-52 | -1.69E-46 |
| MS.gene054885 | MS.gene055957 | 0.822513 | 2.28E-53 | -1.69E-46 |
| MS.gene054885 | MS.gene056041 | 0.801752 | 7.76E-49 | -1.69E-46 |
| MS.gene054885 | MS.gene05640 | 0.850361 | 1.79E-60 | -1.69E-46 |
| MS.gene054885 | MS.gene057458 | 0.847129 | 1.41E-59 | -1.69E-46 |
| MS.gene054885 | MS.gene058853 | 0.815508 | 8.92E-52 | -1.69E-46 |
| MS.gene054885 | MS.gene059553 | 0.816237 | 6.13E-52 | -1.69E-46 |
| MS.gene054885 | MS.gene060473 | 0.8155 | 8.96E-52 | -1.69E-46 |
| MS.gene054885 | MS.gene060565 | 0.813414 | 2.59E-51 | -1.69E-46 |
| MS.gene054885 | MS.gene06093 | 0.860539 | 1.93E-63 | -1.69E-46 |
| MS.gene054885 | MS.gene061260 | 0.823017 | 1.74E-53 | -1.69E-46 |
| MS.gene054885 | MS.gene061275 | 0.814658 | 1.38E-51 | -1.69E-46 |
| MS.gene054885 | MS.gene064834 | 0.817213 | 3.71E-52 | -1.69E-46 |
| MS.gene054885 | MS.gene066026 | 0.802394 | 5.73E-49 | -1.69E-46 |
| MS.gene054885 | MS.gene066265 | 0.803734 | 3.03E-49 | -1.69E-46 |
| MS.gene054885 | MS.gene066551 | 0.805679 | 1.19E-49 | -1.69E-46 |
| MS.gene054885 | MS.gene066552 | 0.80925 | 2.08E-50 | -1.69E-46 |
| MS.gene054885 | MS.gene07051 | 0.836905 | 7.12E-57 | -1.69E-46 |
| MS.gene054885 | MS.gene070800 | 0.814437 | 1.54E-51 | -1.69E-46 |
| MS.gene054885 | MS.gene071185 | 0.817517 | 3.17E-52 | -1.69E-46 |
| MS.gene054885 | MS.gene071422 | 0.802552 | 5.31E-49 | -1.69E-46 |
| MS.gene054885 | MS.gene072702 | 0.829871 | 4.04E-55 | -1.69E-46 |
| MS.gene054885 | MS.gene073059 | 0.800529 | 1.38E-48 | -1.69E-46 |
| MS.gene054885 | MS.gene073062 | 0.800381 | 1.48E-48 | -1.69E-46 |
| MS.gene054885 | MS.gene073698 | 0.815627 | 8.39E-52 | -1.69E-46 |
| MS.gene054885 | MS.gene07616 | 0.81224 | 4.68E-51 | -1.69E-46 |
| MS.gene054885 | MS.gene08836 | 0.821468 | 3.97E-53 | -1.69E-46 |
| MS.gene054885 | MS.gene08988 | 0.812258 | 4.64E-51 | -1.69E-46 |
| MS.gene054885 | MS.gene09234 | 0.824699 | 7.01E-54 | -1.69E-46 |
| MS.gene054885 | MS.gene09258 | 0.827612 | 1.42E-54 | -1.69E-46 |
| MS.gene054885 | MS.gene09540 | 0.800357 | 1.50E-48 | -1.69E-46 |
| MS.gene054885 | MS.gene09543 | 0.80302 | 4.25E-49 | -1.69E-46 |
| MS.gene054885 | MS.gene09594 | 0.843915 | 1.04E-58 | -1.69E-46 |
| MS.gene054885 | MS.gene20224 | 0.877205 | 7.57E-69 | -1.69E-46 |
| MS.gene054885 | MS.gene21320 | 0.815771 | 7.79E-52 | -1.69E-46 |
| MS.gene054885 | MS.gene21734 | 0.818072 | 2.37E-52 | -1.69E-46 |
| MS.gene054885 | MS.gene21888 | 0.826771 | 2.26E-54 | -1.69E-46 |
| MS.gene054885 | MS.gene22500 | 0.837425 | 5.24E-57 | -1.69E-46 |
| MS.gene054885 | MS.gene23323 | 0.801975 | 6.99E-49 | -1.69E-46 |
| MS.gene054885 | MS.gene23886 | 0.836601 | 8.51E-57 | -1.69E-46 |
| MS.gene054885 | MS.gene24830 | 0.814562 | 1.45E-51 | -1.69E-46 |
| MS.gene054885 | MS.gene26406 | 0.810623 | 1.05E-50 | -1.69E-46 |
| MS.gene054885 | MS.gene26508 | 0.800307 | 1.53E-48 | -1.69E-46 |
| MS.gene054885 | MS.gene26619 | 0.823584 | 1.28E-53 | -1.69E-46 |
| MS.gene054885 | MS.gene26706 | 0.827547 | 1.47E-54 | -1.69E-46 |
| MS.gene054885 | MS.gene27811 | 0.831865 | 1.31E-55 | -1.69E-46 |
| MS.gene054885 | MS.gene27812 | 0.832207 | 1.08E-55 | -1.69E-46 |
| MS.gene054885 | MS.gene28807 | 0.835313 | 1.81E-56 | -1.69E-46 |
| MS.gene054885 | MS.gene28867 | 0.829912 | 3.95E-55 | -1.69E-46 |
| MS.gene054885 | MS.gene32467 | 0.800977 | 1.12E-48 | -1.69E-46 |
| MS.gene054885 | MS.gene32740 | 0.812997 | 3.20E-51 | -1.69E-46 |
| MS.gene054885 | MS.gene35150 | 0.839937 | 1.17E-57 | -1.69E-46 |
| MS.gene054885 | MS.gene36485 | 0.83813 | 3.45E-57 | -1.69E-46 |
| MS.gene054885 | MS.gene37495 | 0.801184 | 1.01E-48 | -1.69E-46 |
| MS.gene054885 | MS.gene37925 | 0.827842 | 1.25E-54 | -1.69E-46 |
| MS.gene054885 | MS.gene38828 | 0.822767 | 1.99E-53 | -1.69E-46 |
| MS.gene054885 | MS.gene39538 | 0.821343 | 4.25E-53 | -1.69E-46 |
| MS.gene054885 | MS.gene40329 | 0.843208 | 1.61E-58 | -1.69E-46 |
| MS.gene054885 | MS.gene40405 | 0.832692 | 8.18E-56 | -1.69E-46 |
| MS.gene054885 | MS.gene41205 | 0.805758 | 1.14E-49 | -1.69E-46 |
| MS.gene054885 | MS.gene42651 | 0.803548 | 3.31E-49 | -1.69E-46 |
| MS.gene054885 | MS.gene42663 | 0.824448 | 8.03E-54 | -1.69E-46 |
| MS.gene054885 | MS.gene43391 | 0.91859 | 1.29E-86 | -1.69E-46 |
| MS.gene054885 | MS.gene44100 | 0.802051 | 6.74E-49 | -1.69E-46 |
| MS.gene054885 | MS.gene47007 | 0.84176 | 3.91E-58 | -1.69E-46 |
| MS.gene054885 | MS.gene47664 | 0.805362 | 1.39E-49 | -1.69E-46 |
| MS.gene054885 | MS.gene48067 | 0.816766 | 4.67E-52 | -1.69E-46 |
| MS.gene054885 | MS.gene48406 | 0.802786 | 4.76E-49 | -1.69E-46 |
| MS.gene054885 | MS.gene49165 | 0.800084 | 1.70E-48 | -1.69E-46 |
| MS.gene054885 | MS.gene50484 | 0.829132 | 6.11E-55 | -1.69E-46 |
| MS.gene054885 | MS.gene50613 | 0.816921 | 4.31E-52 | -1.69E-46 |
| MS.gene054885 | MS.gene50734 | 0.802543 | 5.34E-49 | -1.69E-46 |
| MS.gene054885 | MS.gene50736 | 0.824745 | 6.83E-54 | -1.69E-46 |
| MS.gene054885 | MS.gene52624 | 0.815318 | 9.83E-52 | -1.69E-46 |
| MS.gene054885 | MS.gene52703 | 0.81956 | 1.09E-52 | -1.69E-46 |
| MS.gene054885 | MS.gene52980 | 0.812185 | 4.82E-51 | -1.69E-46 |
| MS.gene054885 | MS.gene53408 | 0.832591 | 8.66E-56 | -1.69E-46 |
| MS.gene054885 | MS.gene53887 | 0.837566 | 4.82E-57 | -1.69E-46 |
| MS.gene054885 | MS.gene55817 | 0.837861 | 4.05E-57 | -1.69E-46 |
| MS.gene054885 | MS.gene56789 | 0.81633 | 5.85E-52 | -1.69E-46 |
| MS.gene054885 | MS.gene57750 | 0.812527 | 4.05E-51 | -1.69E-46 |
| MS.gene054885 | MS.gene57751 | 0.847372 | 1.21E-59 | -1.69E-46 |
| MS.gene054885 | MS.gene57752 | 0.845922 | 3.00E-59 | -1.69E-46 |
| MS.gene054885 | MS.gene58114 | 0.805912 | 1.06E-49 | -1.69E-46 |
| MS.gene054885 | MS.gene58234 | 0.850241 | 1.93E-60 | -1.69E-46 |
| MS.gene054885 | MS.gene58285 | 0.802244 | 6.15E-49 | -1.69E-46 |
| MS.gene054885 | MS.gene58754 | 0.840861 | 6.74E-58 | -1.69E-46 |
| MS.gene054885 | MS.gene58835 | 0.848421 | 6.20E-60 | -1.69E-46 |
| MS.gene054885 | MS.gene61112 | 0.820624 | 6.22E-53 | -1.69E-46 |
| MS.gene054885 | MS.gene61977 | 0.815894 | 7.32E-52 | -1.69E-46 |
| MS.gene054885 | MS.gene64859 | 0.806811 | 6.86E-50 | -1.69E-46 |
| MS.gene054885 | MS.gene65301 | 0.842703 | 2.20E-58 | -1.69E-46 |
| MS.gene054885 | MS.gene66403 | 0.818268 | 2.14E-52 | -1.69E-46 |
| MS.gene054885 | MS.gene66429 | 0.803798 | 2.94E-49 | -1.69E-46 |
| MS.gene054885 | MS.gene67555 | 0.835307 | 1.81E-56 | -1.69E-46 |
| MS.gene054885 | MS.gene69328 | 0.814804 | 1.28E-51 | -1.69E-46 |
| MS.gene054885 | MS.gene70263 | 0.829468 | 5.06E-55 | -1.69E-46 |
| MS.gene054885 | MS.gene71431 | 0.835846 | 1.32E-56 | -1.69E-46 |
| MS.gene054885 | MS.gene72088 | 0.821395 | 4.13E-53 | -1.69E-46 |
| MS.gene054885 | MS.gene74328 | 0.805274 | 1.44E-49 | -1.69E-46 |
| MS.gene054885 | MS.gene75318 | 0.845116 | 4.96E-59 | -1.69E-46 |
| MS.gene054885 | MS.gene75320 | 0.838006 | 3.72E-57 | -1.69E-46 |
| MS.gene054885 | MS.gene75642 | 0.851798 | 7.02E-61 | -1.69E-46 |
| MS.gene054885 | MS.gene75915 | 0.80146 | 8.91E-49 | -1.69E-46 |
| MS.gene054885 | MS.gene77476 | 0.801166 | 1.02E-48 | -1.69E-46 |
| MS.gene054885 | MS.gene77563 | 0.854232 | 1.41E-61 | -1.69E-46 |
| MS.gene054885 | MS.gene78156 | 0.808762 | 2.64E-50 | -1.69E-46 |
| MS.gene054885 | MS.gene79251 | 0.801073 | 1.07E-48 | -1.69E-46 |
| MS.gene054885 | MS.gene79921 | 0.850257 | 1.91E-60 | -1.69E-46 |
| MS.gene054885 | MS.gene85599 | 0.800241 | 1.58E-48 | -1.69E-46 |
| MS.gene054885 | MS.gene89653 | 0.805343 | 1.40E-49 | -1.69E-46 |
| MS.gene054885 | MS.gene90302 | 0.811711 | 6.11E-51 | -1.69E-46 |
| MS.gene054885 | MS.gene90876 | 0.809207 | 2.12E-50 | -1.69E-46 |
| MS.gene054885 | MS.gene91551 | 0.800329 | 1.52E-48 | -1.69E-46 |
| MS.gene054885 | MS.gene96390 | 0.800629 | 1.32E-48 | -1.69E-46 |
| MS.gene054885 | MS.gene97701 | 0.802402 | 5.71E-49 | -1.69E-46 |
| MS.gene054885 | MS.gene97703 | 0.813605 | 2.35E-51 | -1.69E-46 |
| MS.gene054885 | MS.gene99337 | 0.833199 | 6.12E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054885.t1 | MTR_7g095500 | 96.760 | 463 | 10 | 1 | 1 | 463 | 1 | 458 | 0.0 | 914 |
| MS.gene054885.t1 | MTR_1g071450 | 75.720 | 486 | 105 | 9 | 1 | 477 | 1 | 482 | 0.0 | 604 |
| MS.gene054885.t1 | MTR_1g041395 | 62.687 | 469 | 154 | 8 | 18 | 477 | 11 | 467 | 4.64e-146 | 426 |
| MS.gene054885.t1 | MTR_1g041395 | 62.687 | 469 | 153 | 8 | 18 | 477 | 11 | 466 | 1.67e-145 | 425 |
| MS.gene054885.t1 | MTR_1g041395 | 62.156 | 473 | 156 | 8 | 18 | 477 | 11 | 473 | 2.30e-145 | 424 |
| MS.gene054885.t1 | MTR_1g102980 | 58.051 | 472 | 168 | 9 | 8 | 477 | 10 | 453 | 3.41e-129 | 382 |
| MS.gene054885.t1 | MTR_1g041395 | 70.569 | 299 | 87 | 1 | 179 | 477 | 39 | 336 | 4.07e-106 | 319 |
| MS.gene054885.t1 | MTR_1g102980 | 62.048 | 332 | 114 | 3 | 147 | 477 | 8 | 328 | 5.06e-95 | 291 |
| MS.gene054885.t1 | MTR_3g110182 | 36.998 | 473 | 214 | 10 | 1 | 469 | 14 | 406 | 2.05e-66 | 219 |
| MS.gene054885.t1 | MTR_4g039910 | 47.390 | 249 | 104 | 4 | 179 | 426 | 100 | 322 | 6.02e-49 | 171 |
| MS.gene054885.t1 | MTR_5g012870 | 36.877 | 301 | 149 | 6 | 180 | 471 | 113 | 381 | 1.09e-44 | 161 |
| MS.gene054885.t1 | MTR_3g110182 | 35.980 | 403 | 175 | 9 | 9 | 407 | 20 | 343 | 6.31e-43 | 155 |
| MS.gene054885.t1 | MTR_7g095630 | 43.316 | 187 | 45 | 3 | 74 | 260 | 74 | 199 | 1.96e-28 | 112 |
| MS.gene054885.t1 | MTR_4g129510 | 33.446 | 296 | 153 | 9 | 180 | 472 | 118 | 372 | 1.99e-14 | 75.1 |
| MS.gene054885.t1 | MTR_4g019730 | 61.702 | 47 | 18 | 0 | 395 | 441 | 1 | 47 | 7.90e-14 | 68.6 |
| MS.gene054885.t1 | MTR_4g129510 | 33.446 | 296 | 153 | 9 | 180 | 472 | 87 | 341 | 1.19e-13 | 72.4 |
| MS.gene054885.t1 | MTR_4g129510 | 48.227 | 141 | 65 | 2 | 180 | 318 | 118 | 252 | 6.03e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054885.t1 | AT3G63300 | 63.489 | 493 | 149 | 12 | 3 | 477 | 10 | 489 | 1.34e-165 | 477 |
| MS.gene054885.t1 | AT3G22810 | 59.002 | 461 | 179 | 5 | 20 | 478 | 18 | 470 | 2.55e-163 | 470 |
| MS.gene054885.t1 | AT4G14740 | 59.524 | 462 | 174 | 5 | 20 | 475 | 18 | 472 | 5.26e-161 | 464 |
| MS.gene054885.t1 | AT4G14740 | 59.524 | 462 | 174 | 5 | 20 | 475 | 18 | 472 | 5.26e-161 | 464 |
| MS.gene054885.t1 | AT5G43870 | 56.867 | 466 | 158 | 9 | 20 | 477 | 22 | 452 | 2.77e-141 | 413 |
| MS.gene054885.t1 | AT4G14740 | 58.942 | 397 | 150 | 5 | 20 | 410 | 18 | 407 | 2.01e-126 | 374 |
| MS.gene054885.t1 | AT3G22810 | 58.929 | 392 | 151 | 5 | 20 | 409 | 18 | 401 | 2.79e-125 | 371 |
| MS.gene054885.t1 | AT3G22810 | 62.236 | 331 | 124 | 1 | 148 | 478 | 3 | 332 | 4.05e-125 | 368 |
| MS.gene054885.t1 | AT4G14740 | 63.253 | 332 | 117 | 2 | 148 | 475 | 3 | 333 | 2.04e-122 | 361 |
| MS.gene054885.t1 | AT3G63300 | 62.611 | 337 | 114 | 5 | 147 | 477 | 1 | 331 | 1.25e-106 | 321 |
| MS.gene054885.t1 | AT5G43870 | 56.642 | 399 | 130 | 9 | 20 | 410 | 22 | 385 | 3.07e-106 | 322 |
| MS.gene054885.t1 | AT4G17350 | 37.417 | 302 | 149 | 7 | 180 | 471 | 115 | 386 | 1.05e-40 | 151 |
| MS.gene054885.t1 | AT4G16670 | 35.430 | 302 | 165 | 6 | 180 | 472 | 132 | 412 | 3.01e-40 | 150 |
| MS.gene054885.t1 | AT5G47440 | 34.035 | 285 | 160 | 4 | 188 | 472 | 131 | 387 | 1.20e-36 | 140 |
| MS.gene054885.t1 | AT4G32780 | 41.017 | 295 | 140 | 6 | 179 | 469 | 150 | 414 | 5.02e-36 | 138 |
| MS.gene054885.t1 | AT4G32780 | 41.017 | 295 | 140 | 6 | 179 | 469 | 131 | 395 | 5.11e-36 | 138 |
| MS.gene054885.t1 | AT4G16670 | 37.238 | 239 | 121 | 5 | 180 | 409 | 132 | 350 | 4.51e-29 | 117 |
| MS.gene054885.t1 | AT4G16670 | 33.209 | 268 | 121 | 6 | 180 | 409 | 132 | 379 | 2.91e-23 | 101 |
| MS.gene054885.t1 | AT5G57770 | 32.069 | 290 | 164 | 7 | 180 | 467 | 128 | 386 | 1.38e-20 | 94.0 |
| MS.gene054885.t1 | AT5G57770 | 35.714 | 224 | 118 | 3 | 180 | 403 | 128 | 325 | 7.60e-20 | 90.9 |
Find 107 sgRNAs with CRISPR-Local
Find 148 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACGGTGGCGGTTCTTTAAC+TGG | 0.219424 | 7.3:-15464179 | MS.gene054885:CDS |
| TCTGGACTCAAGGGGTTTCT+AGG | 0.252811 | 7.3:-15462334 | MS.gene054885:CDS |
| CTCTTCCACCATTGAATAAT+GGG | 0.255578 | 7.3:+15463982 | None:intergenic |
| GCTCTTCCACCATTGAATAA+TGG | 0.258525 | 7.3:+15463981 | None:intergenic |
| TGCCCTTAGCAAGTAGTTCT+TGG | 0.278237 | 7.3:+15462896 | None:intergenic |
| AATTCATCTGAATGAGAAAT+TGG | 0.282397 | 7.3:+15464146 | None:intergenic |
| CTGCCACTCGGAACCGATTC+AGG | 0.307254 | 7.3:+15464628 | None:intergenic |
| CTAGAGCTGTGAAGGACTTA+TGG | 0.308647 | 7.3:-15463062 | MS.gene054885:CDS |
| GGCAATGGCACGGCTTGTTC+AGG | 0.312483 | 7.3:-15463945 | MS.gene054885:CDS |
| ATCAAAGAGAATATGATATC+TGG | 0.312576 | 7.3:-15462352 | MS.gene054885:CDS |
| GAGTGGTTAGTGGTTTCTTC+AGG | 0.337132 | 7.3:+15464460 | None:intergenic |
| GATAATCTACCTGACGTTAA+TGG | 0.341993 | 7.3:+15464221 | None:intergenic |
| ATGGGAGGTATACCAATATC+TGG | 0.367567 | 7.3:-15463006 | MS.gene054885:CDS |
| TAATGATAATGTACCGTTAC+GGG | 0.396975 | 7.3:+15462855 | None:intergenic |
| ATGAAGAGCAAACATGTTGC+AGG | 0.415682 | 7.3:-15462607 | MS.gene054885:CDS |
| CACAATTTCTCCACTATCAC+TGG | 0.431487 | 7.3:+15462948 | None:intergenic |
| TCCATTCACCCATTATTCAA+TGG | 0.432610 | 7.3:-15463990 | MS.gene054885:CDS |
| GACAGACGTGGCTGTTGCTT+CGG | 0.436071 | 7.3:-15463742 | MS.gene054885:CDS |
| AACAACAGCTCCAGTGATAG+TGG | 0.442876 | 7.3:-15462958 | MS.gene054885:CDS |
| CAATTGTCTGCGTCCTGAAT+CGG | 0.446737 | 7.3:-15464641 | MS.gene054885:CDS |
| AGCAAGTAGTTCTTGGCTGC+AGG | 0.448375 | 7.3:+15462903 | None:intergenic |
| TCATCTGATAGATCTCTTCC+TGG | 0.453162 | 7.3:+15462443 | None:intergenic |
| TCTGTTTACATACATCGAAC+AGG | 0.458457 | 7.3:-15462726 | MS.gene054885:CDS |
| TCTTCATGCATGCCTTCAAA+TGG | 0.464517 | 7.3:-15464490 | MS.gene054885:CDS |
| TTCAGATAAAGAGTGGTTAG+TGG | 0.466917 | 7.3:+15464450 | None:intergenic |
| TCAGGACGCAGACAATTGAT+TGG | 0.473398 | 7.3:+15464646 | None:intergenic |
| GGCAGAGGGGTGCTGCCACT+CGG | 0.474082 | 7.3:+15464616 | None:intergenic |
| ACCATTGAATAATGGGTGAA+TGG | 0.477885 | 7.3:+15463989 | None:intergenic |
| CCTCCCATTCCTTTCTCCAA+TGG | 0.478119 | 7.3:+15463021 | None:intergenic |
| GGAGAGTCCTCGAGTTCCTA+TGG | 0.478365 | 7.3:-15464593 | MS.gene054885:CDS |
| AGCAACAGCCACGTCTGTCT+TGG | 0.481577 | 7.3:+15463746 | None:intergenic |
| GGTATACCAATATCTGGAAA+AGG | 0.489627 | 7.3:-15463000 | MS.gene054885:CDS |
| ATAATGATAATGTACCGTTA+CGG | 0.489717 | 7.3:+15462854 | None:intergenic |
| GAGTGGCAGCACCCCTCTGC+CGG | 0.491471 | 7.3:-15464614 | MS.gene054885:CDS |
| CAGCCAAGAACTACTTGCTA+AGG | 0.492651 | 7.3:-15462899 | MS.gene054885:CDS |
| CTTTCAGTGTTGCTGCTCCT+CGG | 0.496117 | 7.3:+15463085 | None:intergenic |
| ACTCGAGGACTCTCCGGCAG+AGG | 0.496378 | 7.3:+15464601 | None:intergenic |
| CTCGAGGACTCTCCGGCAGA+GGG | 0.502516 | 7.3:+15464602 | None:intergenic |
| ATAGGAACTCGAGGACTCTC+CGG | 0.511006 | 7.3:+15464595 | None:intergenic |
| TCAGGAATAGAACCATTTGA+AGG | 0.517205 | 7.3:+15464478 | None:intergenic |
| TGGAATTTCTGTCAAGGTCA+TGG | 0.519995 | 7.3:-15464573 | MS.gene054885:CDS |
| CTTACTGCTGCAGCTGCCAC+AGG | 0.532447 | 7.3:-15463597 | MS.gene054885:intron |
| ACAAAACAAGGATGAGAAGA+TGG | 0.533868 | 7.3:-15463769 | MS.gene054885:CDS |
| AGCGAACCTTTGAACGGTGG+CGG | 0.538212 | 7.3:-15464191 | MS.gene054885:CDS |
| GAATATGATATCTGGACTCA+AGG | 0.538804 | 7.3:-15462344 | MS.gene054885:CDS |
| ACACCATTGGAGAAAGGAAT+GGG | 0.539484 | 7.3:-15463024 | MS.gene054885:CDS |
| TTACTCAAACGCACCCGTAA+CGG | 0.540696 | 7.3:-15462868 | MS.gene054885:intron |
| AGATCTCTTCCTGGCCATGC+TGG | 0.541598 | 7.3:+15462452 | None:intergenic |
| ATTTGCTGTTGCCGCCGCGA+TGG | 0.542104 | 7.3:+15463800 | None:intergenic |
| AATATGATATCTGGACTCAA+GGG | 0.546826 | 7.3:-15462343 | MS.gene054885:CDS |
| GGAAGAGATCTATCAGATGA+TGG | 0.550853 | 7.3:-15462440 | MS.gene054885:CDS |
| GCAGTAACACCATTGGAGAA+AGG | 0.553514 | 7.3:-15463030 | MS.gene054885:CDS |
| AACACCATTGGAGAAAGGAA+TGG | 0.555483 | 7.3:-15463025 | MS.gene054885:CDS |
| AAAGAACCGCCACCGTTCAA+AGG | 0.558652 | 7.3:+15464185 | None:intergenic |
| GACGAGCTGCGAAGTAGCAG+AGG | 0.558780 | 7.3:+15464387 | None:intergenic |
| TGAATTTGACGATGTTGTCA+AGG | 0.561851 | 7.3:-15464129 | MS.gene054885:intron |
| ACGGATTTACCAGCATGGCC+AGG | 0.567017 | 7.3:-15462461 | MS.gene054885:CDS |
| GCGCGACCACCTTGCATCGG+TGG | 0.573326 | 7.3:-15463664 | MS.gene054885:CDS |
| TGTGGAGGCTGCTGAAGCAA+TGG | 0.573897 | 7.3:-15463694 | MS.gene054885:CDS |
| GAAGTGTCGCCATTAACGTC+AGG | 0.575049 | 7.3:-15464230 | MS.gene054885:CDS |
| CTGAGCTGACCACCGATGCA+AGG | 0.581486 | 7.3:+15463655 | None:intergenic |
| CGGATTGAAAACAGACTCGA+GGG | 0.581533 | 7.3:-15462399 | MS.gene054885:CDS |
| TATGTCACACTCTGCTAGAG+AGG | 0.585361 | 7.3:-15464353 | MS.gene054885:intron |
| TAACTGCAGGTGATCTACAC+TGG | 0.586350 | 7.3:-15462758 | MS.gene054885:intron |
| ACTGAAAGCTAGAGCTGTGA+AGG | 0.590453 | 7.3:-15463070 | MS.gene054885:CDS |
| TGGTGCTGCAGTAACACCAT+TGG | 0.591757 | 7.3:-15463037 | MS.gene054885:CDS |
| GTGGAGGCTGCTGAAGCAAT+GGG | 0.591770 | 7.3:-15463693 | MS.gene054885:CDS |
| GGAGAAATTGTGAATGCAGA+TGG | 0.594536 | 7.3:-15462937 | MS.gene054885:CDS |
| TGCTATAGCTGCCATCGCGG+CGG | 0.598800 | 7.3:-15463811 | MS.gene054885:CDS |
| TTCCTATGGAATTTCTGTCA+AGG | 0.602611 | 7.3:-15464579 | MS.gene054885:CDS |
| GCAAATGCTGGTGTTGGCAA+TGG | 0.603762 | 7.3:-15463960 | MS.gene054885:CDS |
| TGAGCGCGACCACCTTGCAT+CGG | 0.609517 | 7.3:-15463667 | MS.gene054885:CDS |
| AGTGTGACATAATGCGCTCA+AGG | 0.610828 | 7.3:+15464365 | None:intergenic |
| ATTCACCCATTATTCAATGG+TGG | 0.611363 | 7.3:-15463987 | MS.gene054885:CDS |
| TCTAGTTGCTGCACAATGTG+TGG | 0.616322 | 7.3:-15463712 | MS.gene054885:CDS |
| TGTTCAGGACCTAAAACTGT+AGG | 0.617678 | 7.3:-15463930 | MS.gene054885:CDS |
| GGAAGAGCAAATGCTGGTGT+TGG | 0.620253 | 7.3:-15463966 | MS.gene054885:CDS |
| AAATTCATCAACACAAAACA+AGG | 0.621432 | 7.3:-15463781 | MS.gene054885:CDS |
| TATTGTGCTAGACGTGTGCA+CGG | 0.621908 | 7.3:-15462480 | MS.gene054885:CDS |
| TGCTGGTGTTGGCAATGGCA+CGG | 0.627563 | 7.3:-15463955 | MS.gene054885:CDS |
| AGCCAAGAACTACTTGCTAA+GGG | 0.627681 | 7.3:-15462898 | MS.gene054885:CDS |
| AGAGATCTTCAGATAAAGAG+TGG | 0.631675 | 7.3:+15464443 | None:intergenic |
| CACAGCAGCGAACCTTTGAA+CGG | 0.633000 | 7.3:-15464197 | MS.gene054885:CDS |
| AGTTGCTGCACAATGTGTGG+AGG | 0.636318 | 7.3:-15463709 | MS.gene054885:CDS |
| GAAGGCATGCATGAAGAATG+AGG | 0.646788 | 7.3:+15464496 | None:intergenic |
| ACATTGTGCAGCAACTAGAG+TGG | 0.648949 | 7.3:+15463716 | None:intergenic |
| ATATGATATCTGGACTCAAG+GGG | 0.656490 | 7.3:-15462342 | MS.gene054885:CDS |
| AGAAATTCCATAGGAACTCG+AGG | 0.657611 | 7.3:+15464586 | None:intergenic |
| AATGGTGGAAGAGCAAATGC+TGG | 0.658370 | 7.3:-15463972 | MS.gene054885:CDS |
| TTCTGCTATAGCTGCCATCG+CGG | 0.658786 | 7.3:-15463814 | MS.gene054885:CDS |
| TCGGATTGAAAACAGACTCG+AGG | 0.660819 | 7.3:-15462400 | MS.gene054885:CDS |
| TGAGGTGGTTGAGAATGAGC+TGG | 0.666197 | 7.3:+15464514 | None:intergenic |
| GACCTAAAACTGTAGGAAGG+TGG | 0.671239 | 7.3:-15463923 | MS.gene054885:CDS |
| GACCTTGACAGAAATTCCAT+AGG | 0.674441 | 7.3:+15464577 | None:intergenic |
| CCTTGATATGTAGCTCTCCG+AGG | 0.677249 | 7.3:-15463102 | MS.gene054885:intron |
| CAGGACCTAAAACTGTAGGA+AGG | 0.679190 | 7.3:-15463926 | MS.gene054885:CDS |
| GAAGATGGCCAAGACAGACG+TGG | 0.685054 | 7.3:-15463754 | MS.gene054885:CDS |
| CGTCCTGAATCGGTTCCGAG+TGG | 0.686606 | 7.3:-15464631 | MS.gene054885:CDS |
| CCATTGGAGAAAGGAATGGG+AGG | 0.688222 | 7.3:-15463021 | MS.gene054885:CDS |
| TCGAGGACTCTCCGGCAGAG+GGG | 0.689304 | 7.3:+15464603 | None:intergenic |
| AGCTGACCACCGATGCAAGG+TGG | 0.692885 | 7.3:+15463658 | None:intergenic |
| AGCAGCGAACCTTTGAACGG+TGG | 0.695192 | 7.3:-15464194 | MS.gene054885:CDS |
| TGTGCACGGATTTACCAGCA+TGG | 0.708131 | 7.3:-15462466 | MS.gene054885:CDS |
| GCTGTGAAGGACTTATGGAA+TGG | 0.718299 | 7.3:-15463057 | MS.gene054885:CDS |
| GCTGCACGCTACAATTACTG+TGG | 0.727804 | 7.3:-15463847 | MS.gene054885:CDS |
| GGATTGAAAACAGACTCGAG+GGG | 0.769794 | 7.3:-15462398 | MS.gene054885:CDS |
| GGCATGCATGAAGAATGAGG+TGG | 0.810503 | 7.3:+15464499 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATTATTATATATGTAAC+AGG | - | chr7.3:15462689-15462708 | MS.gene054885:intron | 10.0% |
| !!! | AAAACAATTAAATTCTGTTT+TGG | - | chr7.3:15464157-15464176 | MS.gene054885:CDS | 15.0% |
| !! | GCATCTATTTCATAATATAA+TGG | - | chr7.3:15463392-15463411 | MS.gene054885:intron | 20.0% |
| !! | TATTAAGACTACAAAATTTC+TGG | - | chr7.3:15464129-15464148 | MS.gene054885:intron | 20.0% |
| !! | TGTATTTAACTAAAATTCTC+TGG | + | chr7.3:15463461-15463480 | None:intergenic | 20.0% |
| !! | TTAATAGCATAATCTGTAAT+TGG | + | chr7.3:15464115-15464134 | None:intergenic | 20.0% |
| !!! | AATAGTCTTAGACATTTTAA+TGG | + | chr7.3:15463597-15463616 | None:intergenic | 20.0% |
| !!! | ACATTTTAATGGTTTATTGT+AGG | + | chr7.3:15463586-15463605 | None:intergenic | 20.0% |
| !!! | AGTTCTATATTTTTACTATG+TGG | - | chr7.3:15462879-15462898 | MS.gene054885:CDS | 20.0% |
| !!! | ATTTAATTAGCGATTTTGTA+TGG | + | chr7.3:15463689-15463708 | None:intergenic | 20.0% |
| ! | AAATTCATCAACACAAAACA+AGG | - | chr7.3:15463160-15463179 | MS.gene054885:intron | 25.0% |
| ! | AATTCATCTGAATGAGAAAT+TGG | + | chr7.3:15462798-15462817 | None:intergenic | 25.0% |
| ! | ATCAAAGAGAATATGATATC+TGG | - | chr7.3:15464589-15464608 | MS.gene054885:CDS | 25.0% |
| ! | ATCACAATTCTTGATATTAC+AGG | - | chr7.3:15463492-15463511 | MS.gene054885:intron | 25.0% |
| ! | CAGTTTATGTAATGTGTATA+TGG | - | chr7.3:15463815-15463834 | MS.gene054885:CDS | 25.0% |
| ! | TTACATAAACTGCGAATATA+AGG | + | chr7.3:15463807-15463826 | None:intergenic | 25.0% |
| !! | ATAATGATAATGTACCGTTA+CGG | + | chr7.3:15464090-15464109 | None:intergenic | 25.0% |
| !! | TTATTACCTTTTCCAGATAT+TGG | + | chr7.3:15463950-15463969 | None:intergenic | 25.0% |
| AAATAGATGCTCAATGATGT+GGG | + | chr7.3:15463382-15463401 | None:intergenic | 30.0% | |
| AATATGATATCTGGACTCAA+GGG | - | chr7.3:15464598-15464617 | MS.gene054885:CDS | 30.0% | |
| AGACATTTAGATTATGCTCT+TGG | - | chr7.3:15463628-15463647 | MS.gene054885:CDS | 30.0% | |
| GCATAATCTAAATGTCTTAG+TGG | + | chr7.3:15463625-15463644 | None:intergenic | 30.0% | |
| ! | AATTAGCGATTTTGTATGGT+TGG | + | chr7.3:15463685-15463704 | None:intergenic | 30.0% |
| ! | CACTTAACTTTAGTTTCACA+AGG | - | chr7.3:15463725-15463744 | MS.gene054885:CDS | 30.0% |
| ! | TAATGATAATGTACCGTTAC+GGG | + | chr7.3:15464089-15464108 | None:intergenic | 30.0% |
| !!! | ACAATTTTTTTTACCAGCAC+AGG | - | chr7.3:15464399-15464418 | MS.gene054885:CDS | 30.0% |
| !!! | CAATGTATGTGCAGTTTTTT+CGG | - | chr7.3:15462919-15462938 | MS.gene054885:CDS | 30.0% |
| AAAACTGCACATACATTGAC+AGG | + | chr7.3:15462917-15462936 | None:intergenic | 35.0% | |
| ACAAAACAAGGATGAGAAGA+TGG | - | chr7.3:15463172-15463191 | MS.gene054885:intron | 35.0% | |
| AGAGATCTTCAGATAAAGAG+TGG | + | chr7.3:15462501-15462520 | None:intergenic | 35.0% | |
| ATATGATATCTGGACTCAAG+GGG | - | chr7.3:15464599-15464618 | MS.gene054885:CDS | 35.0% | |
| ATTCACCCATTATTCAATGG+TGG | - | chr7.3:15462954-15462973 | MS.gene054885:CDS | 35.0% | |
| CTCTTCCACCATTGAATAAT+GGG | + | chr7.3:15462962-15462981 | None:intergenic | 35.0% | |
| GAAATAGATGCTCAATGATG+TGG | + | chr7.3:15463383-15463402 | None:intergenic | 35.0% | |
| GAATATGATATCTGGACTCA+AGG | - | chr7.3:15464597-15464616 | MS.gene054885:CDS | 35.0% | |
| GATAATCTACCTGACGTTAA+TGG | + | chr7.3:15462723-15462742 | None:intergenic | 35.0% | |
| GGAATCAATGTTTCATATCG+CGG | - | chr7.3:15463413-15463432 | MS.gene054885:intron | 35.0% | |
| GGTATACCAATATCTGGAAA+AGG | - | chr7.3:15463941-15463960 | MS.gene054885:CDS | 35.0% | |
| TCAGGAATAGAACCATTTGA+AGG | + | chr7.3:15462466-15462485 | None:intergenic | 35.0% | |
| TCCATTCACCCATTATTCAA+TGG | - | chr7.3:15462951-15462970 | MS.gene054885:CDS | 35.0% | |
| TCTGTTTACATACATCGAAC+AGG | - | chr7.3:15464215-15464234 | MS.gene054885:CDS | 35.0% | |
| TGAATGTGATTGTGTCTTTG+TGG | + | chr7.3:15462634-15462653 | None:intergenic | 35.0% | |
| TGAATTTGACGATGTTGTCA+AGG | - | chr7.3:15462812-15462831 | MS.gene054885:intron | 35.0% | |
| TTAGATTATGCTCTTGGACA+AGG | - | chr7.3:15463634-15463653 | MS.gene054885:CDS | 35.0% | |
| TTCAGATAAAGAGTGGTTAG+TGG | + | chr7.3:15462494-15462513 | None:intergenic | 35.0% | |
| TTCCTATGGAATTTCTGTCA+AGG | - | chr7.3:15462362-15462381 | MS.gene054885:CDS | 35.0% | |
| !! | ACCATTGAATAATGGGTGAA+TGG | + | chr7.3:15462955-15462974 | None:intergenic | 35.0% |
| !!! | GTGAATGCAGATGGTTTTAT+AGG | - | chr7.3:15464013-15464032 | MS.gene054885:intron | 35.0% |
| AACACCATTGGAGAAAGGAA+TGG | - | chr7.3:15463916-15463935 | MS.gene054885:CDS | 40.0% | |
| ACAAGGCTTGCAAACATTTC+AGG | - | chr7.3:15464300-15464319 | MS.gene054885:intron | 40.0% | |
| ACACCATTGGAGAAAGGAAT+GGG | - | chr7.3:15463917-15463936 | MS.gene054885:CDS | 40.0% | |
| AGAAATTCCATAGGAACTCG+AGG | + | chr7.3:15462358-15462377 | None:intergenic | 40.0% | |
| ATGAAGAGCAAACATGTTGC+AGG | - | chr7.3:15464334-15464353 | MS.gene054885:intron | 40.0% | |
| CACAATTTCTCCACTATCAC+TGG | + | chr7.3:15463996-15464015 | None:intergenic | 40.0% | |
| GACCTTGACAGAAATTCCAT+AGG | + | chr7.3:15462367-15462386 | None:intergenic | 40.0% | |
| GCTCTTCCACCATTGAATAA+TGG | + | chr7.3:15462963-15462982 | None:intergenic | 40.0% | |
| GGAAGAGATCTATCAGATGA+TGG | - | chr7.3:15464501-15464520 | MS.gene054885:CDS | 40.0% | |
| GGAGAAATTGTGAATGCAGA+TGG | - | chr7.3:15464004-15464023 | MS.gene054885:CDS | 40.0% | |
| TACGTGTTCATTCGTTGACA+AGG | - | chr7.3:15464283-15464302 | MS.gene054885:intron | 40.0% | |
| TATGTTTCGATTGCCTCAAG+AGG | + | chr7.3:15463540-15463559 | None:intergenic | 40.0% | |
| TCATCTGATAGATCTCTTCC+TGG | + | chr7.3:15464501-15464520 | None:intergenic | 40.0% | |
| TCTTCATGCATGCCTTCAAA+TGG | - | chr7.3:15462451-15462470 | MS.gene054885:CDS | 40.0% | |
| TGGAATTTCTGTCAAGGTCA+TGG | - | chr7.3:15462368-15462387 | MS.gene054885:CDS | 40.0% | |
| TGTTCAGGACCTAAAACTGT+AGG | - | chr7.3:15463011-15463030 | MS.gene054885:CDS | 40.0% | |
| ! | AACCACCTTCCTACAGTTTT+AGG | + | chr7.3:15463023-15463042 | None:intergenic | 40.0% |
| ! | AGCCAAGAACTACTTGCTAA+GGG | - | chr7.3:15464043-15464062 | MS.gene054885:intron | 40.0% |
| ! | ATGGGAGGTATACCAATATC+TGG | - | chr7.3:15463935-15463954 | MS.gene054885:CDS | 40.0% |
| ! | TTTTACCAGCACAGGTACAT+AGG | - | chr7.3:15464407-15464426 | MS.gene054885:CDS | 40.0% |
| !!! | TCTGTTTTGGTGATAACTGC+AGG | - | chr7.3:15464170-15464189 | MS.gene054885:CDS | 40.0% |
| AACAACAGCTCCAGTGATAG+TGG | - | chr7.3:15463983-15464002 | MS.gene054885:CDS | 45.0% | |
| ACATTGTGCAGCAACTAGAG+TGG | + | chr7.3:15463228-15463247 | None:intergenic | 45.0% | |
| ACTGAAAGCTAGAGCTGTGA+AGG | - | chr7.3:15463871-15463890 | MS.gene054885:CDS | 45.0% | |
| AGTGTGACATAATGCGCTCA+AGG | + | chr7.3:15462579-15462598 | None:intergenic | 45.0% | |
| CAATTGTCTGCGTCCTGAAT+CGG | - | chr7.3:15462300-15462319 | MS.gene054885:CDS | 45.0% | |
| CAGGACCTAAAACTGTAGGA+AGG | - | chr7.3:15463015-15463034 | MS.gene054885:CDS | 45.0% | |
| CGGATTGAAAACAGACTCGA+GGG | - | chr7.3:15464542-15464561 | MS.gene054885:CDS | 45.0% | |
| CTAGAGCTGTGAAGGACTTA+TGG | - | chr7.3:15463879-15463898 | MS.gene054885:CDS | 45.0% | |
| GACCTAAAACTGTAGGAAGG+TGG | - | chr7.3:15463018-15463037 | MS.gene054885:CDS | 45.0% | |
| GAGTGGTTAGTGGTTTCTTC+AGG | + | chr7.3:15462484-15462503 | None:intergenic | 45.0% | |
| GCAGTAACACCATTGGAGAA+AGG | - | chr7.3:15463911-15463930 | MS.gene054885:CDS | 45.0% | |
| GCTGTGAAGGACTTATGGAA+TGG | - | chr7.3:15463884-15463903 | MS.gene054885:CDS | 45.0% | |
| GGAGAAAAACGACGCTACTT+CGG | - | chr7.3:15464522-15464541 | MS.gene054885:CDS | 45.0% | |
| GGATTGAAAACAGACTCGAG+GGG | - | chr7.3:15464543-15464562 | MS.gene054885:CDS | 45.0% | |
| TAACTGCAGGTGATCTACAC+TGG | - | chr7.3:15464183-15464202 | MS.gene054885:CDS | 45.0% | |
| TATGACCTATGTACCTGTGC+TGG | + | chr7.3:15464415-15464434 | None:intergenic | 45.0% | |
| TATGTCACACTCTGCTAGAG+AGG | - | chr7.3:15462588-15462607 | MS.gene054885:CDS | 45.0% | |
| TATTGTGCTAGACGTGTGCA+CGG | - | chr7.3:15464461-15464480 | MS.gene054885:CDS | 45.0% | |
| TCAGGACGCAGACAATTGAT+TGG | + | chr7.3:15462298-15462317 | None:intergenic | 45.0% | |
| TCGGATTGAAAACAGACTCG+AGG | - | chr7.3:15464541-15464560 | MS.gene054885:CDS | 45.0% | |
| TCTAGTTGCTGCACAATGTG+TGG | - | chr7.3:15463229-15463248 | MS.gene054885:intron | 45.0% | |
| TGCCCTTAGCAAGTAGTTCT+TGG | + | chr7.3:15464048-15464067 | None:intergenic | 45.0% | |
| TTACTCAAACGCACCCGTAA+CGG | - | chr7.3:15464073-15464092 | MS.gene054885:intron | 45.0% | |
| ! | AATGGTGGAAGAGCAAATGC+TGG | - | chr7.3:15462969-15462988 | MS.gene054885:CDS | 45.0% |
| ! | CAGCCAAGAACTACTTGCTA+AGG | - | chr7.3:15464042-15464061 | MS.gene054885:intron | 45.0% |
| ! | GAAGGCATGCATGAAGAATG+AGG | + | chr7.3:15462448-15462467 | None:intergenic | 45.0% |
| ! | TGGGCTAATAGTCTTACCTG+TGG | + | chr7.3:15463363-15463382 | None:intergenic | 45.0% |
| AAAGAACCGCCACCGTTCAA+AGG | + | chr7.3:15462759-15462778 | None:intergenic | 50.0% | |
| AGCAAGTAGTTCTTGGCTGC+AGG | + | chr7.3:15464041-15464060 | None:intergenic | 50.0% | |
| AGTTGCTGCACAATGTGTGG+AGG | - | chr7.3:15463232-15463251 | MS.gene054885:intron | 50.0% | |
| ATAGGAACTCGAGGACTCTC+CGG | + | chr7.3:15462349-15462368 | None:intergenic | 50.0% | |
| CACAGCAGCGAACCTTTGAA+CGG | - | chr7.3:15462744-15462763 | MS.gene054885:CDS | 50.0% | |
| CCATTGGAGAAAGGAATGGG+AGG | - | chr7.3:15463920-15463939 | MS.gene054885:CDS | 50.0% | |
| CCTCAAGAGGACTACGATCA+GGG | + | chr7.3:15463527-15463546 | None:intergenic | 50.0% | |
| CCTCCCATTCCTTTCTCCAA+TGG | + | chr7.3:15463923-15463942 | None:intergenic | 50.0% | |
| CCTCGGAGAGCTACATATCA+AGG | + | chr7.3:15463842-15463861 | None:intergenic | 50.0% | |
| CCTTGATATGTAGCTCTCCG+AGG | - | chr7.3:15463839-15463858 | MS.gene054885:CDS | 50.0% | |
| CTCAAGAGGACTACGATCAG+GGG | + | chr7.3:15463526-15463545 | None:intergenic | 50.0% | |
| GCTGCACGCTACAATTACTG+TGG | - | chr7.3:15463094-15463113 | MS.gene054885:intron | 50.0% | |
| GGAAGAGCAAATGCTGGTGT+TGG | - | chr7.3:15462975-15462994 | MS.gene054885:CDS | 50.0% | |
| GGCATGCATGAAGAATGAGG+TGG | + | chr7.3:15462445-15462464 | None:intergenic | 50.0% | |
| TCTGGACTCAAGGGGTTTCT+AGG | - | chr7.3:15464607-15464626 | MS.gene054885:CDS | 50.0% | |
| TGAGGTGGTTGAGAATGAGC+TGG | + | chr7.3:15462430-15462449 | None:intergenic | 50.0% | |
| TGTGCACGGATTTACCAGCA+TGG | - | chr7.3:15464475-15464494 | MS.gene054885:CDS | 50.0% | |
| TTCTGCTATAGCTGCCATCG+CGG | - | chr7.3:15463127-15463146 | MS.gene054885:intron | 50.0% | |
| ! | AACGGTGGCGGTTCTTTAAC+TGG | - | chr7.3:15462762-15462781 | MS.gene054885:intron | 50.0% |
| ! | CTTTCAGTGTTGCTGCTCCT+CGG | + | chr7.3:15463859-15463878 | None:intergenic | 50.0% |
| !! | GAAGTGTCGCCATTAACGTC+AGG | - | chr7.3:15462711-15462730 | MS.gene054885:intron | 50.0% |
| !! | GCAAATGCTGGTGTTGGCAA+TGG | - | chr7.3:15462981-15463000 | MS.gene054885:CDS | 50.0% |
| !! | TGGTGCTGCAGTAACACCAT+TGG | - | chr7.3:15463904-15463923 | MS.gene054885:CDS | 50.0% |
| ACGGATTTACCAGCATGGCC+AGG | - | chr7.3:15464480-15464499 | MS.gene054885:CDS | 55.0% | |
| AGATCTCTTCCTGGCCATGC+TGG | + | chr7.3:15464492-15464511 | None:intergenic | 55.0% | |
| AGCAACAGCCACGTCTGTCT+TGG | + | chr7.3:15463198-15463217 | None:intergenic | 55.0% | |
| AGCAGCGAACCTTTGAACGG+TGG | - | chr7.3:15462747-15462766 | MS.gene054885:CDS | 55.0% | |
| AGCGAACCTTTGAACGGTGG+CGG | - | chr7.3:15462750-15462769 | MS.gene054885:CDS | 55.0% | |
| CCCTGATCGTAGTCCTCTTG+AGG | - | chr7.3:15463524-15463543 | MS.gene054885:intron | 55.0% | |
| GAAGATGGCCAAGACAGACG+TGG | - | chr7.3:15463187-15463206 | MS.gene054885:intron | 55.0% | |
| GCCTCAAGAGGACTACGATC+AGG | + | chr7.3:15463528-15463547 | None:intergenic | 55.0% | |
| GGAGAGTCCTCGAGTTCCTA+TGG | - | chr7.3:15462348-15462367 | MS.gene054885:CDS | 55.0% | |
| GTGGAGGCTGCTGAAGCAAT+GGG | - | chr7.3:15463248-15463267 | MS.gene054885:intron | 55.0% | |
| TGTGGAGGCTGCTGAAGCAA+TGG | - | chr7.3:15463247-15463266 | MS.gene054885:intron | 55.0% | |
| ! | GACAGACGTGGCTGTTGCTT+CGG | - | chr7.3:15463199-15463218 | MS.gene054885:intron | 55.0% |
| !! | TGCTGGTGTTGGCAATGGCA+CGG | - | chr7.3:15462986-15463005 | MS.gene054885:CDS | 55.0% |
| AGCTGACCACCGATGCAAGG+TGG | + | chr7.3:15463286-15463305 | None:intergenic | 60.0% | |
| CTGAGCTGACCACCGATGCA+AGG | + | chr7.3:15463289-15463308 | None:intergenic | 60.0% | |
| CTTACTGCTGCAGCTGCCAC+AGG | - | chr7.3:15463344-15463363 | MS.gene054885:intron | 60.0% | |
| GACGAGCTGCGAAGTAGCAG+AGG | + | chr7.3:15462557-15462576 | None:intergenic | 60.0% | |
| TGAGCGCGACCACCTTGCAT+CGG | - | chr7.3:15463274-15463293 | MS.gene054885:intron | 60.0% | |
| TGCTATAGCTGCCATCGCGG+CGG | - | chr7.3:15463130-15463149 | MS.gene054885:intron | 60.0% | |
| ! | CGTCCTGAATCGGTTCCGAG+TGG | - | chr7.3:15462310-15462329 | MS.gene054885:CDS | 60.0% |
| ! | CTGCCACTCGGAACCGATTC+AGG | + | chr7.3:15462316-15462335 | None:intergenic | 60.0% |
| ! | GGCAATGGCACGGCTTGTTC+AGG | - | chr7.3:15462996-15463015 | MS.gene054885:CDS | 60.0% |
| !! | ATTTGCTGTTGCCGCCGCGA+TGG | + | chr7.3:15463144-15463163 | None:intergenic | 60.0% |
| ACTCGAGGACTCTCCGGCAG+AGG | + | chr7.3:15462343-15462362 | None:intergenic | 65.0% | |
| CTCGAGGACTCTCCGGCAGA+GGG | + | chr7.3:15462342-15462361 | None:intergenic | 65.0% | |
| TCGAGGACTCTCCGGCAGAG+GGG | + | chr7.3:15462341-15462360 | None:intergenic | 65.0% | |
| GAGTGGCAGCACCCCTCTGC+CGG | - | chr7.3:15462327-15462346 | MS.gene054885:CDS | 70.0% | |
| GCGCGACCACCTTGCATCGG+TGG | - | chr7.3:15463277-15463296 | MS.gene054885:intron | 70.0% | |
| !! | GGCAGAGGGGTGCTGCCACT+CGG | + | chr7.3:15462328-15462347 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 15462289 | 15464674 | 15462289 | ID=MS.gene054885 |
| chr7.3 | mRNA | 15462289 | 15464674 | 15462289 | ID=MS.gene054885.t1;Parent=MS.gene054885 |
| chr7.3 | exon | 15464354 | 15464674 | 15464354 | ID=MS.gene054885.t1.exon1;Parent=MS.gene054885.t1 |
| chr7.3 | CDS | 15464354 | 15464674 | 15464354 | ID=cds.MS.gene054885.t1;Parent=MS.gene054885.t1 |
| chr7.3 | exon | 15464130 | 15464252 | 15464130 | ID=MS.gene054885.t1.exon2;Parent=MS.gene054885.t1 |
| chr7.3 | CDS | 15464130 | 15464252 | 15464130 | ID=cds.MS.gene054885.t1;Parent=MS.gene054885.t1 |
| chr7.3 | exon | 15463598 | 15464030 | 15463598 | ID=MS.gene054885.t1.exon3;Parent=MS.gene054885.t1 |
| chr7.3 | CDS | 15463598 | 15464030 | 15463598 | ID=cds.MS.gene054885.t1;Parent=MS.gene054885.t1 |
| chr7.3 | exon | 15462869 | 15463111 | 15462869 | ID=MS.gene054885.t1.exon4;Parent=MS.gene054885.t1 |
| chr7.3 | CDS | 15462869 | 15463111 | 15462869 | ID=cds.MS.gene054885.t1;Parent=MS.gene054885.t1 |
| chr7.3 | exon | 15462722 | 15462771 | 15462722 | ID=MS.gene054885.t1.exon5;Parent=MS.gene054885.t1 |
| chr7.3 | CDS | 15462722 | 15462771 | 15462722 | ID=cds.MS.gene054885.t1;Parent=MS.gene054885.t1 |
| chr7.3 | exon | 15462584 | 15462641 | 15462584 | ID=MS.gene054885.t1.exon6;Parent=MS.gene054885.t1 |
| chr7.3 | CDS | 15462584 | 15462641 | 15462584 | ID=cds.MS.gene054885.t1;Parent=MS.gene054885.t1 |
| chr7.3 | exon | 15462289 | 15462503 | 15462289 | ID=MS.gene054885.t1.exon7;Parent=MS.gene054885.t1 |
| chr7.3 | CDS | 15462289 | 15462503 | 15462289 | ID=cds.MS.gene054885.t1;Parent=MS.gene054885.t1 |
| Gene Sequence |
| Protein sequence |
