Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77561.t1 | RHN42406.1 | 98 | 343 | 7 | 0 | 1 | 343 | 1 | 343 | 2.10E-199 | 704.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77561.t1 | Q9FI94 | 84.3 | 338 | 52 | 1 | 7 | 343 | 2 | 339 | 1.0e-173 | 610.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77561.t1 | A0A396GMQ6 | 98.0 | 343 | 7 | 0 | 1 | 343 | 1 | 343 | 1.5e-199 | 704.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene77561 | 0.821701 | 3.51E-53 | -1.69E-46 |
| MS.gene049404 | MS.gene77561 | 0.806385 | 8.44E-50 | -1.69E-46 |
| MS.gene050020 | MS.gene77561 | 0.821324 | 4.29E-53 | -1.69E-46 |
| MS.gene05016 | MS.gene77561 | 0.805436 | 1.34E-49 | -1.69E-46 |
| MS.gene050442 | MS.gene77561 | 0.811908 | 5.53E-51 | -1.69E-46 |
| MS.gene050586 | MS.gene77561 | 0.811519 | 6.72E-51 | -1.69E-46 |
| MS.gene050807 | MS.gene77561 | 0.844568 | 6.97E-59 | -1.69E-46 |
| MS.gene050959 | MS.gene77561 | 0.807421 | 5.10E-50 | -1.69E-46 |
| MS.gene051719 | MS.gene77561 | 0.800507 | 1.40E-48 | -1.69E-46 |
| MS.gene052323 | MS.gene77561 | 0.840885 | 6.64E-58 | -1.69E-46 |
| MS.gene052516 | MS.gene77561 | 0.806693 | 7.27E-50 | -1.69E-46 |
| MS.gene052611 | MS.gene77561 | 0.80928 | 2.05E-50 | -1.69E-46 |
| MS.gene052665 | MS.gene77561 | 0.834725 | 2.54E-56 | -1.69E-46 |
| MS.gene052896 | MS.gene77561 | 0.800441 | 1.44E-48 | -1.69E-46 |
| MS.gene053074 | MS.gene77561 | 0.811021 | 8.62E-51 | -1.69E-46 |
| MS.gene054467 | MS.gene77561 | 0.808913 | 2.45E-50 | -1.69E-46 |
| MS.gene055512 | MS.gene77561 | 0.831646 | 1.48E-55 | -1.69E-46 |
| MS.gene05604 | MS.gene77561 | 0.828542 | 8.49E-55 | -1.69E-46 |
| MS.gene056173 | MS.gene77561 | 0.803129 | 4.04E-49 | -1.69E-46 |
| MS.gene056553 | MS.gene77561 | 0.804383 | 2.22E-49 | -1.69E-46 |
| MS.gene056643 | MS.gene77561 | 0.809339 | 1.99E-50 | -1.69E-46 |
| MS.gene057060 | MS.gene77561 | 0.813651 | 2.30E-51 | -1.69E-46 |
| MS.gene057869 | MS.gene77561 | 0.836017 | 1.20E-56 | -1.69E-46 |
| MS.gene057915 | MS.gene77561 | 0.813279 | 2.77E-51 | -1.69E-46 |
| MS.gene059713 | MS.gene77561 | 0.80074 | 1.25E-48 | -1.69E-46 |
| MS.gene059937 | MS.gene77561 | 0.810385 | 1.18E-50 | -1.69E-46 |
| MS.gene060587 | MS.gene77561 | 0.802763 | 4.81E-49 | -1.69E-46 |
| MS.gene060803 | MS.gene77561 | 0.814599 | 1.42E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77561.t1 | MTR_8g079080 | 71.739 | 46 | 7 | 1 | 230 | 269 | 45 | 90 | 8.30e-14 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77561.t1 | AT5G05920 | 83.824 | 340 | 54 | 1 | 7 | 345 | 2 | 341 | 0.0 | 613 |
| MS.gene77561.t1 | AT5G05920 | 90.367 | 218 | 21 | 0 | 128 | 345 | 6 | 223 | 1.51e-150 | 426 |
| MS.gene77561.t1 | AT5G05920 | 90.196 | 153 | 15 | 0 | 193 | 345 | 1 | 153 | 1.41e-101 | 299 |
Find 94 sgRNAs with CRISPR-Local
Find 289 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAATTTGATGGAAGTGATTC+TGG | 0.236275 | 3.2:-72931578 | MS.gene77561:CDS |
| GAATCGAATCGGTAATTTAT+TGG | 0.240496 | 3.2:-72933935 | MS.gene77561:CDS |
| CGAAACCTCTTCATTGATAA+AGG | 0.252532 | 3.2:-72931329 | MS.gene77561:CDS |
| TTGGCAATACAACAGATATA+AGG | 0.272646 | 3.2:-72931745 | MS.gene77561:intron |
| ATGAAAACTCCTACCTTTAC+TGG | 0.273857 | 3.2:-72932190 | MS.gene77561:CDS |
| AATTTGCAATAGTTGTCATT+AGG | 0.299937 | 3.2:+72933910 | None:intergenic |
| ATGTACAGCTTCACCATTCA+TGG | 0.318700 | 3.2:+72931721 | None:intergenic |
| ATTTGCAATAGTTGTCATTA+GGG | 0.327811 | 3.2:+72933911 | None:intergenic |
| TGATGAAGATAAGAAGGATT+TGG | 0.345245 | 3.2:-72934954 | MS.gene77561:CDS |
| CATTTGATTAACGACTTTAA+CGG | 0.349232 | 3.2:+72935116 | None:intergenic |
| GTTAATCCTGGACAATAAAC+TGG | 0.349470 | 3.2:+72931914 | None:intergenic |
| ATTAAATGTCAATGGTAAAC+TGG | 0.354497 | 3.2:+72931145 | None:intergenic |
| TGAAATCATAACCCTCGATT+TGG | 0.358260 | 3.2:+72935214 | None:intergenic |
| TGCCTTGCGCCAACATATAA+AGG | 0.358724 | 3.2:-72934000 | MS.gene77561:CDS |
| AATACTGCACAAGAATTTGA+TGG | 0.361085 | 3.2:-72931590 | MS.gene77561:CDS |
| GGTTTGCTGTCAAAAGTAAA+AGG | 0.384187 | 3.2:-72931308 | MS.gene77561:CDS |
| ACTTCTAATCTTATCTCTTC+CGG | 0.389881 | 3.2:-72934890 | MS.gene77561:CDS |
| TGCACCATTGCGCATCATAT+TGG | 0.397312 | 3.2:+72931631 | None:intergenic |
| CCCCATGAAACAGCCTCATC+TGG | 0.399289 | 3.2:+72931548 | None:intergenic |
| AGGATTAACCGATGGCTCAT+TGG | 0.403351 | 3.2:-72931900 | MS.gene77561:CDS |
| GTCCAGATGAGGCTGTTTCA+TGG | 0.409575 | 3.2:-72931550 | MS.gene77561:CDS |
| CTCAAATCAATGCTCACAAC+TGG | 0.413436 | 3.2:-72935165 | MS.gene77561:CDS |
| AAAGGAGATTTCTCTTTGCC+TGG | 0.415853 | 3.2:-72933982 | MS.gene77561:CDS |
| TGACAACTATTGCAAATTTG+AGG | 0.416421 | 3.2:-72933905 | MS.gene77561:CDS |
| TGGCAATACAACAGATATAA+GGG | 0.421254 | 3.2:-72931744 | MS.gene77561:intron |
| CAGTGTGTTTGAGATCTTGA+TGG | 0.424114 | 3.2:-72931169 | MS.gene77561:CDS |
| TCATCACAATCCTCATCAAT+AGG | 0.426415 | 3.2:+72934971 | None:intergenic |
| GCGTTGCAAATGTGATGTTT+TGG | 0.427804 | 3.2:+72931653 | None:intergenic |
| GGATTAACCGATGGCTCATT+GGG | 0.439770 | 3.2:-72931899 | MS.gene77561:CDS |
| CGTTAAAGTCGTTAATCAAA+TGG | 0.440345 | 3.2:-72935115 | MS.gene77561:intron |
| ATAAGAAGGATTTGGAGTAT+AGG | 0.444673 | 3.2:-72934946 | MS.gene77561:CDS |
| AATATTCCAGTTTATTGTCC+AGG | 0.444941 | 3.2:-72931920 | MS.gene77561:CDS |
| TCCAGATGAGGCTGTTTCAT+GGG | 0.445073 | 3.2:-72931549 | MS.gene77561:CDS |
| AACATGGGCTGAAGCTAGAT+TGG | 0.447487 | 3.2:-72935009 | MS.gene77561:intron |
| CATGTAGTTGTTACAACTAC+AGG | 0.448520 | 3.2:-72934048 | MS.gene77561:CDS |
| AACGATAGCATTTCCTCTGC+TGG | 0.449058 | 3.2:-72931376 | MS.gene77561:intron |
| AGGATCTGCTAAAACTGTTA+AGG | 0.452905 | 3.2:-72931516 | MS.gene77561:intron |
| ATCCAAGTTAATAGCTCGAT+TGG | 0.455505 | 3.2:-72932228 | MS.gene77561:CDS |
| CTACCTTTACTGGGCATACA+AGG | 0.457425 | 3.2:-72932180 | MS.gene77561:intron |
| TCAAAAGTAAAAGGTGTGGC+TGG | 0.460091 | 3.2:-72931299 | MS.gene77561:CDS |
| TTTAACGGCATCACCAAAGT+TGG | 0.472768 | 3.2:+72935131 | None:intergenic |
| CCACAATCAGACCAGGGTTG+TGG | 0.480874 | 3.2:+72931852 | None:intergenic |
| GGAGCTTATCTTCGCTCAAA+AGG | 0.483770 | 3.2:-72933961 | MS.gene77561:CDS |
| TCCCAATCGAGCTATTAACT+TGG | 0.489104 | 3.2:+72932226 | None:intergenic |
| GAGAAATCTCCTTTATATGT+TGG | 0.490219 | 3.2:+72933991 | None:intergenic |
| ACTATTGCAAATTTGAGGAC+TGG | 0.495960 | 3.2:-72933900 | MS.gene77561:CDS |
| ACAGTCAAATTAAATGTCAA+TGG | 0.497497 | 3.2:+72931137 | None:intergenic |
| TTCCATTCCTTCCACAACCC+TGG | 0.501487 | 3.2:-72931863 | MS.gene77561:CDS |
| ATAATCATGCCTGTCTTGCT+AGG | 0.505038 | 3.2:+72931692 | None:intergenic |
| AATGAGCCATCGGTTAATCC+TGG | 0.515125 | 3.2:+72931902 | None:intergenic |
| CATGCAAGTCCTAGCAAGAC+AGG | 0.515398 | 3.2:-72931701 | MS.gene77561:CDS |
| TCCAAGTTAATAGCTCGATT+GGG | 0.518058 | 3.2:-72932227 | MS.gene77561:CDS |
| GACCAGGGTTGTGGAAGGAA+TGG | 0.523520 | 3.2:+72931861 | None:intergenic |
| GCAAACCTTTATCAATGAAG+AGG | 0.531950 | 3.2:+72931324 | None:intergenic |
| TCAAAAGGATTGAATCGAAT+CGG | 0.532537 | 3.2:-72933946 | MS.gene77561:CDS |
| CCACAACCCTGGTCTGATTG+TGG | 0.535100 | 3.2:-72931852 | MS.gene77561:CDS |
| AATCGAGCTATTAACTTGGA+TGG | 0.538542 | 3.2:+72932230 | None:intergenic |
| CTCCTTTATATGTTGGCGCA+AGG | 0.549124 | 3.2:+72933998 | None:intergenic |
| ATGAAGAGGTTTCGTTCTTG+AGG | 0.549560 | 3.2:+72931338 | None:intergenic |
| GGATTGTGATGAAGATAAGA+AGG | 0.551599 | 3.2:-72934960 | MS.gene77561:CDS |
| ATGGGCTGAAGCTAGATTGG+AGG | 0.553739 | 3.2:-72935006 | MS.gene77561:intron |
| TTGCCTTGTATGCCCAGTAA+AGG | 0.557308 | 3.2:+72932177 | None:intergenic |
| TTTGAGCGAAGATAAGCTCC+AGG | 0.562914 | 3.2:+72933964 | None:intergenic |
| CCAGATGAGGCTGTTTCATG+GGG | 0.576966 | 3.2:-72931548 | MS.gene77561:CDS |
| TTCGGATTCTTTGAAGACTG+TGG | 0.578307 | 3.2:+72935257 | None:intergenic |
| ACAGATATAAGGGCCATGAA+TGG | 0.581048 | 3.2:-72931734 | MS.gene77561:intron |
| CTTGTATGCCCAGTAAAGGT+AGG | 0.581698 | 3.2:+72932181 | None:intergenic |
| TGAAAACTCCTACCTTTACT+GGG | 0.585821 | 3.2:-72932189 | MS.gene77561:CDS |
| TTCTGGAGCTCGTCCAGATG+AGG | 0.586670 | 3.2:-72931561 | MS.gene77561:CDS |
| ACGAACAACATCTCTAACAC+CGG | 0.588213 | 3.2:+72934871 | None:intergenic |
| CAAAAGTAAAAGGTGTGGCT+GGG | 0.590827 | 3.2:-72931298 | MS.gene77561:CDS |
| AAAGAATCCGAAAACCTCGC+AGG | 0.594396 | 3.2:-72935246 | MS.gene77561:CDS |
| TATTGTCCAGGATTAACCGA+TGG | 0.595026 | 3.2:-72931908 | MS.gene77561:CDS |
| TTACCTTTGTCAGCATCACA+TGG | 0.601287 | 3.2:-72934849 | MS.gene77561:intron |
| AATGTTTCAGCAACCAGCAG+AGG | 0.615976 | 3.2:+72931363 | None:intergenic |
| AGGAAAGTGTCTCCAAATCG+AGG | 0.620843 | 3.2:-72935226 | MS.gene77561:CDS |
| AATCAGACCAGGGTTGTGGA+AGG | 0.625156 | 3.2:+72931856 | None:intergenic |
| GGTTGATGAACCTATTGATG+AGG | 0.625189 | 3.2:-72934981 | MS.gene77561:CDS |
| CATGTCACCCAATGAGCCAT+CGG | 0.626979 | 3.2:+72931892 | None:intergenic |
| ACTATGTCCACAATCAGACC+AGG | 0.627546 | 3.2:+72931845 | None:intergenic |
| GGAAAGTGTCTCCAAATCGA+GGG | 0.640745 | 3.2:-72935225 | MS.gene77561:CDS |
| AACGCCAATATGATGCGCAA+TGG | 0.648917 | 3.2:-72931635 | MS.gene77561:CDS |
| GCTGAAGCTAGATTGGAGGT+TGG | 0.656485 | 3.2:-72935002 | MS.gene77561:intron |
| TTTGGAGACACTTTCCTGCG+AGG | 0.661904 | 3.2:+72935232 | None:intergenic |
| CTGATTGTGGACATAGTGCA+AGG | 0.662154 | 3.2:-72931839 | MS.gene77561:intron |
| GAGGGTTATGATTTCAACCG+CGG | 0.671769 | 3.2:-72935207 | MS.gene77561:CDS |
| TCACCATGTGATGCTGACAA+AGG | 0.672957 | 3.2:+72934846 | None:intergenic |
| GAAGACTGTGGAGTGAACTG+AGG | 0.694757 | 3.2:+72935269 | None:intergenic |
| GCTGTTGATAATCGACGCCG+CGG | 0.724424 | 3.2:+72935190 | None:intergenic |
| CTATGTCCACAATCAGACCA+GGG | 0.727373 | 3.2:+72931846 | None:intergenic |
| GCTGTCAAAAGTAAAAGGTG+TGG | 0.727672 | 3.2:-72931303 | MS.gene77561:CDS |
| GTAGTTGTTACAACTACAGG+TGG | 0.729482 | 3.2:-72934045 | MS.gene77561:CDS |
| GCGCAATGGTGCAGACTATG+CGG | 0.731569 | 3.2:-72931621 | MS.gene77561:CDS |
| CAGATGAGGCTGTTTCATGG+GGG | 0.740121 | 3.2:-72931547 | MS.gene77561:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTATATAAACAACTAAAT+CGG | + | chr3.2:72933162-72933181 | None:intergenic | 10.0% |
| !! | TATAATAATTATTGTAATGA+AGG | + | chr3.2:72932643-72932662 | None:intergenic | 10.0% |
| !! | TTAGTTGTTTATATAAATAT+TGG | - | chr3.2:72933164-72933183 | MS.gene77561:intron | 10.0% |
| !! | AAAAAAAAAAACTTCATATG+AGG | + | chr3.2:72934125-72934144 | None:intergenic | 15.0% |
| !! | AAATATTGTTTAATTACTAC+TGG | - | chr3.2:72933942-72933961 | MS.gene77561:CDS | 15.0% |
| !! | AATATATAAAAACAAAGAGA+TGG | + | chr3.2:72931401-72931420 | None:intergenic | 15.0% |
| !! | ATATATAAAAACAAAGAGAT+GGG | + | chr3.2:72931400-72931419 | None:intergenic | 15.0% |
| !! | CTAATTCTAATGAAAAAAAA+AGG | + | chr3.2:72933812-72933831 | None:intergenic | 15.0% |
| !! | TGTTTATATAAATATTGGTA+TGG | - | chr3.2:72933169-72933188 | MS.gene77561:intron | 15.0% |
| !! | TTCAACATTTGATTAAAAAT+AGG | + | chr3.2:72932584-72932603 | None:intergenic | 15.0% |
| !!! | ATAAAAAAGACATAGTTTTA+AGG | + | chr3.2:72935029-72935048 | None:intergenic | 15.0% |
| !!! | TAAAAAAGACATAGTTTTAA+GGG | + | chr3.2:72935028-72935047 | None:intergenic | 15.0% |
| !!! | TATTTTTAATCAAATGTTGA+AGG | - | chr3.2:72932583-72932602 | MS.gene77561:intron | 15.0% |
| !!! | TTCTTCATTTCTTTTTTAAA+AGG | + | chr3.2:72933756-72933775 | None:intergenic | 15.0% |
| !!! | TTTAACATTTGTATTTTGTT+TGG | - | chr3.2:72933892-72933911 | MS.gene77561:CDS | 15.0% |
| !! | AATTATGAACAAATGACTTA+TGG | - | chr3.2:72933048-72933067 | MS.gene77561:intron | 20.0% |
| !! | ACCTTGAAAATCTTAATTTA+TGG | - | chr3.2:72932837-72932856 | MS.gene77561:intron | 20.0% |
| !! | CTTCAAATATATCTAGTAAA+AGG | + | chr3.2:72932248-72932267 | None:intergenic | 20.0% |
| !! | GCAAAATTATTATTGAAATC+TGG | + | chr3.2:72933729-72933748 | None:intergenic | 20.0% |
| !! | GGAATCATAACTAAAATAAT+TGG | - | chr3.2:72934688-72934707 | MS.gene77561:intron | 20.0% |
| !! | TAGTAAAAGGAAATTGTAAT+AGG | + | chr3.2:72932235-72932254 | None:intergenic | 20.0% |
| !! | TATATAAAAACAAAGAGATG+GGG | + | chr3.2:72931399-72931418 | None:intergenic | 20.0% |
| !!! | AATCTTAATAAGCATGTTTT+GGG | - | chr3.2:72933308-72933327 | MS.gene77561:intron | 20.0% |
| !!! | ACAATAAATCAAGACTTTTA+TGG | + | chr3.2:72932926-72932945 | None:intergenic | 20.0% |
| !!! | ACCATAAATTAAGATTTTCA+AGG | + | chr3.2:72932841-72932860 | None:intergenic | 20.0% |
| !!! | ATACATGTATAAAGGTATAA+GGG | - | chr3.2:72932129-72932148 | MS.gene77561:intron | 20.0% |
| !!! | TAATCTTAATAAGCATGTTT+TGG | - | chr3.2:72933307-72933326 | MS.gene77561:intron | 20.0% |
| !!! | TATACATGTATAAAGGTATA+AGG | - | chr3.2:72932128-72932147 | MS.gene77561:intron | 20.0% |
| !!! | TATGTATTTGCTAATCTAAA+TGG | - | chr3.2:72931677-72931696 | MS.gene77561:CDS | 20.0% |
| ! | AAACCAAGGTTAATCAAAAT+TGG | + | chr3.2:72934028-72934047 | None:intergenic | 25.0% |
| ! | AATTTGCAATAGTTGTCATT+AGG | + | chr3.2:72932545-72932564 | None:intergenic | 25.0% |
| ! | AGCAACATATAAGAAATTCA+AGG | + | chr3.2:72931949-72931968 | None:intergenic | 25.0% |
| ! | ATATAAAAACAAAGAGATGG+GGG | + | chr3.2:72931398-72931417 | None:intergenic | 25.0% |
| ! | ATTTGCAATAGTTGTCATTA+GGG | + | chr3.2:72932544-72932563 | None:intergenic | 25.0% |
| ! | CATTTGATTAACGACTTTAA+CGG | + | chr3.2:72931339-72931358 | None:intergenic | 25.0% |
| ! | CTGAATTTATTGGATAGTTT+GGG | - | chr3.2:72931748-72931767 | MS.gene77561:intron | 25.0% |
| ! | GATATAGTACAACAAAAGTT+TGG | + | chr3.2:72935006-72935025 | None:intergenic | 25.0% |
| ! | GGTAGTATATACATGTATAA+AGG | - | chr3.2:72932121-72932140 | MS.gene77561:intron | 25.0% |
| ! | TATACATTATGTTCTTGTTG+AGG | - | chr3.2:72933561-72933580 | MS.gene77561:intron | 25.0% |
| ! | TGAATTTATTGGATAGTTTG+GGG | - | chr3.2:72931749-72931768 | MS.gene77561:intron | 25.0% |
| ! | TGCACATAATATAATACCAT+TGG | - | chr3.2:72934485-72934504 | MS.gene77561:intron | 25.0% |
| ! | TTGACCTAATATACTATTCT+TGG | + | chr3.2:72932185-72932204 | None:intergenic | 25.0% |
| ! | TTTGTGAAGGTAATTAAAAC+TGG | - | chr3.2:72932673-72932692 | MS.gene77561:intron | 25.0% |
| !! | ATATGATTCAGTTTTTGTGA+AGG | - | chr3.2:72932660-72932679 | MS.gene77561:intron | 25.0% |
| !! | ATGGATGATTTTGAATCAAT+TGG | - | chr3.2:72934667-72934686 | MS.gene77561:intron | 25.0% |
| !! | TGATATCGAGTTTAGATTTT+CGG | - | chr3.2:72934301-72934320 | MS.gene77561:intron | 25.0% |
| !! | TTCTCTCTTTTAAACAATGT+TGG | - | chr3.2:72932963-72932982 | MS.gene77561:intron | 25.0% |
| !!! | ATTTTCAAGGTGATGATAAA+AGG | + | chr3.2:72932828-72932847 | None:intergenic | 25.0% |
| !!! | GTTACATGTAAAGTGTTTTT+GGG | - | chr3.2:72931535-72931554 | MS.gene77561:CDS | 25.0% |
| !!! | TAATACCATTGGTATTTTTG+TGG | - | chr3.2:72934496-72934515 | MS.gene77561:intron | 25.0% |
| !!! | TGTTACATGTAAAGTGTTTT+TGG | - | chr3.2:72931534-72931553 | MS.gene77561:CDS | 25.0% |
| AAACACCACAAAAATACCAA+TGG | + | chr3.2:72934504-72934523 | None:intergenic | 30.0% | |
| AAAGTAAATAGTACATCTGC+AGG | - | chr3.2:72932993-72933012 | MS.gene77561:intron | 30.0% | |
| AAGGTTAATCAAAATTGGAC+TGG | + | chr3.2:72934023-72934042 | None:intergenic | 30.0% | |
| AAGTTCCATACCAAAACATT+TGG | + | chr3.2:72935210-72935229 | None:intergenic | 30.0% | |
| AATACTGCACAAGAATTTGA+TGG | - | chr3.2:72934862-72934881 | MS.gene77561:CDS | 30.0% | |
| AATATTCCAGTTTATTGTCC+AGG | - | chr3.2:72934532-72934551 | MS.gene77561:intron | 30.0% | |
| ACTTCTAATCTTATCTCTTC+CGG | - | chr3.2:72931562-72931581 | MS.gene77561:CDS | 30.0% | |
| AGAGATCAAACTATGTTGTA+TGG | - | chr3.2:72933386-72933405 | MS.gene77561:intron | 30.0% | |
| AGTATCCGCATAATAATAGT+TGG | - | chr3.2:72933102-72933121 | MS.gene77561:intron | 30.0% | |
| ATATATTTGAAGATCCTGGT+GGG | - | chr3.2:72932256-72932275 | MS.gene77561:intron | 30.0% | |
| CAAATCCACAAAATATCTCA+AGG | + | chr3.2:72933672-72933691 | None:intergenic | 30.0% | |
| CACAACATTACAAAAACACT+TGG | + | chr3.2:72932334-72932353 | None:intergenic | 30.0% | |
| CCAAACTATCCAATAAATTC+AGG | + | chr3.2:72931750-72931769 | None:intergenic | 30.0% | |
| CCTGAATTTATTGGATAGTT+TGG | - | chr3.2:72931747-72931766 | MS.gene77561:intron | 30.0% | |
| CGGTATTTATATAGTGTGAT+TGG | - | chr3.2:72933456-72933475 | MS.gene77561:intron | 30.0% | |
| CGTTAAAGTCGTTAATCAAA+TGG | - | chr3.2:72931337-72931356 | MS.gene77561:CDS | 30.0% | |
| CTAGATATATTTGAAGATCC+TGG | - | chr3.2:72932252-72932271 | MS.gene77561:intron | 30.0% | |
| GAATCGAATCGGTAATTTAT+TGG | - | chr3.2:72932517-72932536 | MS.gene77561:intron | 30.0% | |
| GAATTTATTGGATAGTTTGG+GGG | - | chr3.2:72931750-72931769 | MS.gene77561:intron | 30.0% | |
| GAGAAATCTCCTTTATATGT+TGG | + | chr3.2:72932464-72932483 | None:intergenic | 30.0% | |
| GAGTTTAAAAATCTGTGTGA+AGG | - | chr3.2:72931807-72931826 | MS.gene77561:intron | 30.0% | |
| GTATCCGCATAATAATAGTT+GGG | - | chr3.2:72933103-72933122 | MS.gene77561:intron | 30.0% | |
| GTTATCTCCTTTAAGCAATA+TGG | - | chr3.2:72932877-72932896 | MS.gene77561:intron | 30.0% | |
| GTTTAAAAGAGAGAACTAGT+AGG | + | chr3.2:72932958-72932977 | None:intergenic | 30.0% | |
| TACGCCAAGAATAGTATATT+AGG | - | chr3.2:72932178-72932197 | MS.gene77561:intron | 30.0% | |
| TATAAAAACAAAGAGATGGG+GGG | + | chr3.2:72931397-72931416 | None:intergenic | 30.0% | |
| TATTGCTTAAAGGAGATAAC+TGG | + | chr3.2:72932877-72932896 | None:intergenic | 30.0% | |
| TCAAAAGGATTGAATCGAAT+CGG | - | chr3.2:72932506-72932525 | MS.gene77561:intron | 30.0% | |
| TCATGACTACAAAAATCAGT+GGG | + | chr3.2:72932022-72932041 | None:intergenic | 30.0% | |
| TGAAGGTAATTAAAACTGGA+TGG | - | chr3.2:72932677-72932696 | MS.gene77561:intron | 30.0% | |
| TGAAGTTCCATATTGCTTAA+AGG | + | chr3.2:72932887-72932906 | None:intergenic | 30.0% | |
| TGACAACTATTGCAAATTTG+AGG | - | chr3.2:72932547-72932566 | MS.gene77561:intron | 30.0% | |
| TGATGAAGATAAGAAGGATT+TGG | - | chr3.2:72931498-72931517 | MS.gene77561:intron | 30.0% | |
| TGGCAATACAACAGATATAA+GGG | - | chr3.2:72934708-72934727 | MS.gene77561:intron | 30.0% | |
| TTCATGACTACAAAAATCAG+TGG | + | chr3.2:72932023-72932042 | None:intergenic | 30.0% | |
| TTGGCAATACAACAGATATA+AGG | - | chr3.2:72934707-72934726 | MS.gene77561:intron | 30.0% | |
| ! | AAAGCTTTTGTCTATGTCTA+TGG | + | chr3.2:72931703-72931722 | None:intergenic | 30.0% |
| ! | AACAAGTAGCGAAAGTATAT+AGG | + | chr3.2:72934967-72934986 | None:intergenic | 30.0% |
| ! | AAGACAGGCATGATTATTTT+AGG | - | chr3.2:72934766-72934785 | MS.gene77561:intron | 30.0% |
| ! | ATAAGAAGGATTTGGAGTAT+AGG | - | chr3.2:72931506-72931525 | MS.gene77561:intron | 30.0% |
| ! | GATATTTTGTGGATTTGTGA+TGG | - | chr3.2:72933675-72933694 | MS.gene77561:intron | 30.0% |
| ! | GTATATAAGGTTTTCGTTGT+GGG | - | chr3.2:72933208-72933227 | MS.gene77561:intron | 30.0% |
| ! | TAAGTAGTGCATGTTTGTTA+AGG | - | chr3.2:72933493-72933512 | MS.gene77561:intron | 30.0% |
| ! | TATATAAGGTTTTCGTTGTG+GGG | - | chr3.2:72933209-72933228 | MS.gene77561:intron | 30.0% |
| ! | TATTGCCTTGAGATATTTTG+TGG | - | chr3.2:72933664-72933683 | MS.gene77561:intron | 30.0% |
| ! | TATTTGCTCAATGATTTGCA+TGG | - | chr3.2:72931851-72931870 | MS.gene77561:CDS | 30.0% |
| ! | TCAATTCCTTTGTGTCTTTT+TGG | - | chr3.2:72931420-72931439 | MS.gene77561:intron | 30.0% |
| ! | TCATTTTACTCTTTACTGCA+TGG | - | chr3.2:72934648-72934667 | MS.gene77561:intron | 30.0% |
| !! | ATGTTTTGGGTGTTAATAGT+AGG | - | chr3.2:72933321-72933340 | MS.gene77561:intron | 30.0% |
| !!! | ACTTCATCATCTTCCTTTTT+TGG | - | chr3.2:72934181-72934200 | MS.gene77561:intron | 30.0% |
| !!! | AGTCCAATTTTGATTAACCT+TGG | - | chr3.2:72934022-72934041 | MS.gene77561:CDS | 30.0% |
| !!! | AGTGTTCACTTGCTATATTT+TGG | - | chr3.2:72933519-72933538 | MS.gene77561:intron | 30.0% |
| !!! | CTTTTTTATTTCGCTAAACC+AGG | - | chr3.2:72935040-72935059 | MS.gene77561:intron | 30.0% |
| !!! | TCACTTGCTATATTTTGGTA+GGG | - | chr3.2:72933524-72933543 | MS.gene77561:intron | 30.0% |
| !!! | TTCACTTGCTATATTTTGGT+AGG | - | chr3.2:72933523-72933542 | MS.gene77561:intron | 30.0% |
| !!! | TTTGTGTCTTTTTGGAACAT+GGG | - | chr3.2:72931428-72931447 | MS.gene77561:intron | 30.0% |
| AAATAGTACATCTGCAGGAA+AGG | - | chr3.2:72932998-72933017 | MS.gene77561:intron | 35.0% | |
| ACAGCAAATTCTGCCAAAAA+AGG | + | chr3.2:72934197-72934216 | None:intergenic | 35.0% | |
| ACTATTGCAAATTTGAGGAC+TGG | - | chr3.2:72932552-72932571 | MS.gene77561:intron | 35.0% | |
| AGGATCTGCTAAAACTGTTA+AGG | - | chr3.2:72934936-72934955 | MS.gene77561:CDS | 35.0% | |
| ATAACATGGTTCAGTTGAAC+CGG | + | chr3.2:72933642-72933661 | None:intergenic | 35.0% | |
| ATCCAAGTTAATAGCTCGAT+TGG | - | chr3.2:72934224-72934243 | MS.gene77561:intron | 35.0% | |
| ATGAAAACTCCTACCTTTAC+TGG | - | chr3.2:72934262-72934281 | MS.gene77561:intron | 35.0% | |
| ATTATGTTCTTGTTGAGGTG+TGG | - | chr3.2:72933566-72933585 | MS.gene77561:intron | 35.0% | |
| ATTCTGTATGCAGGATATCT+AGG | + | chr3.2:72934406-72934425 | None:intergenic | 35.0% | |
| CAAGAATATGCATGACTATG+AGG | - | chr3.2:72932100-72932119 | MS.gene77561:intron | 35.0% | |
| CATGTAGTTGTTACAACTAC+AGG | - | chr3.2:72932404-72932423 | MS.gene77561:intron | 35.0% | |
| CATGTTCCAAAAAGACACAA+AGG | + | chr3.2:72931429-72931448 | None:intergenic | 35.0% | |
| CTCAAGGCAATACAATAACA+TGG | + | chr3.2:72933656-72933675 | None:intergenic | 35.0% | |
| CTGATTGCTCCTGAATTTAT+TGG | - | chr3.2:72931738-72931757 | MS.gene77561:intron | 35.0% | |
| GAATTTGATGGAAGTGATTC+TGG | - | chr3.2:72934874-72934893 | MS.gene77561:CDS | 35.0% | |
| GAGGTGTGGTTTCTAATAAT+TGG | - | chr3.2:72933580-72933599 | MS.gene77561:intron | 35.0% | |
| GATATATTTGAAGATCCTGG+TGG | - | chr3.2:72932255-72932274 | MS.gene77561:intron | 35.0% | |
| GGAAATTAACAGCATAACGA+TGG | + | chr3.2:72934385-72934404 | None:intergenic | 35.0% | |
| GGATTGTGATGAAGATAAGA+AGG | - | chr3.2:72931492-72931511 | MS.gene77561:intron | 35.0% | |
| GTTAATCCTGGACAATAAAC+TGG | + | chr3.2:72934541-72934560 | None:intergenic | 35.0% | |
| GTTGAAGGAACAAAAAGAAG+AGG | - | chr3.2:72932598-72932617 | MS.gene77561:intron | 35.0% | |
| TATTGGTATGGAAACAATGC+TGG | - | chr3.2:72933181-72933200 | MS.gene77561:intron | 35.0% | |
| TCATCACAATCCTCATCAAT+AGG | + | chr3.2:72931484-72931503 | None:intergenic | 35.0% | |
| TCCAAGTTAATAGCTCGATT+GGG | - | chr3.2:72934225-72934244 | MS.gene77561:intron | 35.0% | |
| TGAAAACTCCTACCTTTACT+GGG | - | chr3.2:72934263-72934282 | MS.gene77561:intron | 35.0% | |
| TGAAATCATAACCCTCGATT+TGG | + | chr3.2:72931241-72931260 | None:intergenic | 35.0% | |
| TTAAAACTGGATGGTTTGAC+CGG | - | chr3.2:72932686-72932705 | MS.gene77561:intron | 35.0% | |
| TTGTAATGTTGTGAACGACA+TGG | - | chr3.2:72932341-72932360 | MS.gene77561:intron | 35.0% | |
| ! | AATCGAGCTATTAACTTGGA+TGG | + | chr3.2:72934225-72934244 | None:intergenic | 35.0% |
| ! | AATTGATTCCAATGACACCA+TGG | - | chr3.2:72933355-72933374 | MS.gene77561:intron | 35.0% |
| ! | CATCTGAAAAATGATGATGC+AGG | - | chr3.2:72933429-72933448 | MS.gene77561:intron | 35.0% |
| ! | GGTATATAAGGTTTTCGTTG+TGG | - | chr3.2:72933207-72933226 | MS.gene77561:intron | 35.0% |
| ! | GTATAAAGGTATAAGGGTGA+TGG | - | chr3.2:72932135-72932154 | MS.gene77561:intron | 35.0% |
| ! | TATATGTTGCTTGTCACTCA+GGG | - | chr3.2:72931958-72931977 | MS.gene77561:intron | 35.0% |
| ! | TTATATGTTGCTTGTCACTC+AGG | - | chr3.2:72931957-72931976 | MS.gene77561:intron | 35.0% |
| ! | TTTTCTTGCATCTGTTCTAC+AGG | - | chr3.2:72932379-72932398 | MS.gene77561:intron | 35.0% |
| !! | TGCAAATGTGATGTTTTGGA+AGG | + | chr3.2:72934798-72934817 | None:intergenic | 35.0% |
| !!! | ACAGGCATGATTATTTTAGG+AGG | - | chr3.2:72934769-72934788 | MS.gene77561:intron | 35.0% |
| !!! | CTTTGTGTCTTTTTGGAACA+TGG | - | chr3.2:72931427-72931446 | MS.gene77561:intron | 35.0% |
| !!! | TTTTTTGGCAGAATTTGCTG+TGG | - | chr3.2:72934196-72934215 | MS.gene77561:intron | 35.0% |
| AAAACATTTGGCACTCACTG+TGG | + | chr3.2:72935198-72935217 | None:intergenic | 40.0% | |
| AAAGGAGATTTCTCTTTGCC+TGG | - | chr3.2:72932470-72932489 | MS.gene77561:intron | 40.0% | |
| AAGGAAGATGATGAAGTGAC+AGG | + | chr3.2:72934178-72934197 | None:intergenic | 40.0% | |
| AATGACTTATGGTTGCTACC+TGG | - | chr3.2:72933059-72933078 | MS.gene77561:intron | 40.0% | |
| AATTACTACTGGTCCATCCT+CGG | - | chr3.2:72933953-72933972 | MS.gene77561:CDS | 40.0% | |
| ACAGATATAAGGGCCATGAA+TGG | - | chr3.2:72934718-72934737 | MS.gene77561:intron | 40.0% | |
| ACGAACAACATCTCTAACAC+CGG | + | chr3.2:72931584-72931603 | None:intergenic | 40.0% | |
| ATAATCATGCCTGTCTTGCT+AGG | + | chr3.2:72934763-72934782 | None:intergenic | 40.0% | |
| ATCTGCAGGAAAGGAATTAC+CGG | - | chr3.2:72933007-72933026 | MS.gene77561:intron | 40.0% | |
| ATGAAGAGGTTTCGTTCTTG+AGG | + | chr3.2:72935117-72935136 | None:intergenic | 40.0% | |
| ATGTACAGCTTCACCATTCA+TGG | + | chr3.2:72934734-72934753 | None:intergenic | 40.0% | |
| ATTGGATAGTTTGGGGGATT+GGG | - | chr3.2:72931756-72931775 | MS.gene77561:intron | 40.0% | |
| CCAGCCCAACTATTATTATG+CGG | + | chr3.2:72933110-72933129 | None:intergenic | 40.0% | |
| CTCAAATCAATGCTCACAAC+TGG | - | chr3.2:72931287-72931306 | MS.gene77561:CDS | 40.0% | |
| GCGTAATACCTAAGCTAACA+AGG | + | chr3.2:72932163-72932182 | None:intergenic | 40.0% | |
| GCTGTCAAAAGTAAAAGGTG+TGG | - | chr3.2:72935149-72935168 | MS.gene77561:CDS | 40.0% | |
| GGTATGGAACTTAAAGACCA+AGG | - | chr3.2:72935218-72935237 | MS.gene77561:CDS | 40.0% | |
| GTAGTTGTTACAACTACAGG+TGG | - | chr3.2:72932407-72932426 | MS.gene77561:intron | 40.0% | |
| GTTGTATGGTGTATAGCAGT+GGG | - | chr3.2:72933400-72933419 | MS.gene77561:intron | 40.0% | |
| TAAAACTGGATGGTTTGACC+GGG | - | chr3.2:72932687-72932706 | MS.gene77561:intron | 40.0% | |
| TATTGGATAGTTTGGGGGAT+TGG | - | chr3.2:72931755-72931774 | MS.gene77561:intron | 40.0% | |
| TATTGTCCAGGATTAACCGA+TGG | - | chr3.2:72934544-72934563 | MS.gene77561:intron | 40.0% | |
| TCCCAATCGAGCTATTAACT+TGG | + | chr3.2:72934229-72934248 | None:intergenic | 40.0% | |
| TGGAAATAGCTTCTACAGGT+TGG | - | chr3.2:72933127-72933146 | MS.gene77561:intron | 40.0% | |
| TGGAACTTAAAGACCAAGGT+CGG | - | chr3.2:72935222-72935241 | MS.gene77561:CDS | 40.0% | |
| TGTTGTATGGTGTATAGCAG+TGG | - | chr3.2:72933399-72933418 | MS.gene77561:intron | 40.0% | |
| TTACCTTTGTCAGCATCACA+TGG | - | chr3.2:72931603-72931622 | MS.gene77561:CDS | 40.0% | |
| TTGTATGGTGTATAGCAGTG+GGG | - | chr3.2:72933401-72933420 | MS.gene77561:intron | 40.0% | |
| TTTAACGGCATCACCAAAGT+TGG | + | chr3.2:72931324-72931343 | None:intergenic | 40.0% | |
| ! | AAAATGATGATGCAGGCTAG+CGG | - | chr3.2:72933436-72933455 | MS.gene77561:intron | 40.0% |
| ! | ACAGTGAGTGCCAAATGTTT+TGG | - | chr3.2:72935197-72935216 | MS.gene77561:CDS | 40.0% |
| ! | CAAAAGTAAAAGGTGTGGCT+GGG | - | chr3.2:72935154-72935173 | MS.gene77561:CDS | 40.0% |
| ! | CAATGCTGGAGAGGTATATA+AGG | - | chr3.2:72933195-72933214 | MS.gene77561:intron | 40.0% |
| ! | CAGTGTGTTTGAGATCTTGA+TGG | - | chr3.2:72935283-72935302 | MS.gene77561:CDS | 40.0% |
| ! | GATTTTACTCCTGACAGTTC+TGG | - | chr3.2:72933607-72933626 | MS.gene77561:intron | 40.0% |
| ! | GCGTTGCAAATGTGATGTTT+TGG | + | chr3.2:72934802-72934821 | None:intergenic | 40.0% |
| ! | TCAAAAGTAAAAGGTGTGGC+TGG | - | chr3.2:72935153-72935172 | MS.gene77561:CDS | 40.0% |
| ! | TGATGGTTCCTTGTTAGCTT+AGG | - | chr3.2:72932152-72932171 | MS.gene77561:intron | 40.0% |
| ! | TTCGGATTCTTTGAAGACTG+TGG | + | chr3.2:72931198-72931217 | None:intergenic | 40.0% |
| !! | AATAGCTTCTACAGGTTGGT+CGG | - | chr3.2:72933131-72933150 | MS.gene77561:intron | 40.0% |
| !! | GGTTGATGAACCTATTGATG+AGG | - | chr3.2:72931471-72931490 | MS.gene77561:intron | 40.0% |
| !! | GGTTTTCAAGCTTCCAACTT+TGG | - | chr3.2:72931308-72931327 | MS.gene77561:CDS | 40.0% |
| !!! | CATGGTGAGTGTGTGTTTTT+TGG | - | chr3.2:72931621-72931640 | MS.gene77561:CDS | 40.0% |
| !!! | GAGTGCCAAATGTTTTGGTA+TGG | - | chr3.2:72935202-72935221 | MS.gene77561:CDS | 40.0% |
| !!! | GGCATGATTATTTTAGGAGG+CGG | - | chr3.2:72934772-72934791 | MS.gene77561:intron | 40.0% |
| AAAGAATCCGAAAACCTCGC+AGG | - | chr3.2:72931206-72931225 | MS.gene77561:intron | 45.0% | |
| AACGATAGCATTTCCTCTGC+TGG | - | chr3.2:72935076-72935095 | MS.gene77561:intron | 45.0% | |
| AACGCCAATATGATGCGCAA+TGG | - | chr3.2:72934817-72934836 | MS.gene77561:intron | 45.0% | |
| AAGGTTTAATGGTCTGACCG+AGG | + | chr3.2:72933973-72933992 | None:intergenic | 45.0% | |
| AATGTTTCAGCAACCAGCAG+AGG | + | chr3.2:72935092-72935111 | None:intergenic | 45.0% | |
| ACTATGTCCACAATCAGACC+AGG | + | chr3.2:72934610-72934629 | None:intergenic | 45.0% | |
| AGGATTAACCGATGGCTCAT+TGG | - | chr3.2:72934552-72934571 | MS.gene77561:intron | 45.0% | |
| AGTCGCTTGGCAATTAAGCA+TGG | + | chr3.2:72931903-72931922 | None:intergenic | 45.0% | |
| ATAGCTTCATCAAACCCACC+AGG | + | chr3.2:72932273-72932292 | None:intergenic | 45.0% | |
| CATTGAATCACTGTAGTCGC+TGG | + | chr3.2:72933999-72934018 | None:intergenic | 45.0% | |
| CCATGTTGCATTCTGTATGC+AGG | + | chr3.2:72934415-72934434 | None:intergenic | 45.0% | |
| CCGCATAATAATAGTTGGGC+TGG | - | chr3.2:72933107-72933126 | MS.gene77561:intron | 45.0% | |
| CCTGCATACAGAATGCAACA+TGG | - | chr3.2:72934412-72934431 | MS.gene77561:intron | 45.0% | |
| CTACCTTTACTGGGCATACA+AGG | - | chr3.2:72934272-72934291 | MS.gene77561:intron | 45.0% | |
| CTATGTCCACAATCAGACCA+GGG | + | chr3.2:72934609-72934628 | None:intergenic | 45.0% | |
| CTCCTTTATATGTTGGCGCA+AGG | + | chr3.2:72932457-72932476 | None:intergenic | 45.0% | |
| CTGATTGTGGACATAGTGCA+AGG | - | chr3.2:72934613-72934632 | MS.gene77561:intron | 45.0% | |
| CTTGTATGCCCAGTAAAGGT+AGG | + | chr3.2:72934274-72934293 | None:intergenic | 45.0% | |
| GAGGGTTATGATTTCAACCG+CGG | - | chr3.2:72931245-72931264 | MS.gene77561:intron | 45.0% | |
| GGAGCTTATCTTCGCTCAAA+AGG | - | chr3.2:72932491-72932510 | MS.gene77561:intron | 45.0% | |
| GGATTAACCGATGGCTCATT+GGG | - | chr3.2:72934553-72934572 | MS.gene77561:intron | 45.0% | |
| GTATGGAAACAATGCTGGAG+AGG | - | chr3.2:72933186-72933205 | MS.gene77561:intron | 45.0% | |
| GTTTCATGGGGGAAAATACG+AGG | - | chr3.2:72934916-72934935 | MS.gene77561:CDS | 45.0% | |
| TCACCATGTGATGCTGACAA+AGG | + | chr3.2:72931609-72931628 | None:intergenic | 45.0% | |
| TCGGCTGTATGTCATACTTG+AGG | - | chr3.2:72935241-72935260 | MS.gene77561:CDS | 45.0% | |
| TCGTTGCATCACAATGTACC+TGG | + | chr3.2:72935061-72935080 | None:intergenic | 45.0% | |
| TGCACCATTGCGCATCATAT+TGG | + | chr3.2:72934824-72934843 | None:intergenic | 45.0% | |
| TGCCTTGCGCCAACATATAA+AGG | - | chr3.2:72932452-72932471 | MS.gene77561:intron | 45.0% | |
| TTGATCTCTCCTCAGTACCA+TGG | + | chr3.2:72933375-72933394 | None:intergenic | 45.0% | |
| TTGCCTTGTATGCCCAGTAA+AGG | + | chr3.2:72934278-72934297 | None:intergenic | 45.0% | |
| TTTAATGGTCTGACCGAGGA+TGG | + | chr3.2:72933969-72933988 | None:intergenic | 45.0% | |
| TTTACTCAACCTTTCTCCGC+CGG | + | chr3.2:72933029-72933048 | None:intergenic | 45.0% | |
| TTTGAGCGAAGATAAGCTCC+AGG | + | chr3.2:72932491-72932510 | None:intergenic | 45.0% | |
| ! | AACATGGGCTGAAGCTAGAT+TGG | - | chr3.2:72931443-72931462 | MS.gene77561:intron | 45.0% |
| ! | AATGAGCCATCGGTTAATCC+TGG | + | chr3.2:72934553-72934572 | None:intergenic | 45.0% |
| ! | ACACTTTCCTGCGAGGTTTT+CGG | + | chr3.2:72931216-72931235 | None:intergenic | 45.0% |
| ! | ACCAGTGGTAGATTTGGTCT+TGG | - | chr3.2:72933245-72933264 | MS.gene77561:intron | 45.0% |
| ! | GCTCAATGATTTGCATGGCT+TGG | - | chr3.2:72931856-72931875 | MS.gene77561:CDS | 45.0% |
| ! | TCCAGATGAGGCTGTTTCAT+GGG | - | chr3.2:72934903-72934922 | MS.gene77561:CDS | 45.0% |
| !! | AGCTCAACTGGTTTGAGCTA+AGG | - | chr3.2:72931780-72931799 | MS.gene77561:intron | 45.0% |
| !! | AGGAAAGTGTCTCCAAATCG+AGG | - | chr3.2:72931226-72931245 | MS.gene77561:intron | 45.0% |
| !! | GGAAAGTGTCTCCAAATCGA+GGG | - | chr3.2:72931227-72931246 | MS.gene77561:intron | 45.0% |
| !! | GTCGCTGGTTCAAGGTTTAA+TGG | + | chr3.2:72933984-72934003 | None:intergenic | 45.0% |
| !!! | AAATTAAAAAGTTATAATTT+TGG | - | chr3.2:72933832-72933851 | MS.gene77561:intron | 5.0% |
| !!! | AATTAAAAAGTTATAATTTT+GGG | - | chr3.2:72933833-72933852 | MS.gene77561:intron | 5.0% |
| !!! | TACATTTTTTTTAAAAAAAA+AGG | + | chr3.2:72932769-72932788 | None:intergenic | 5.0% |
| AAGGAATTACCGGCGGAGAA+AGG | - | chr3.2:72933017-72933036 | MS.gene77561:intron | 50.0% | |
| AATCAGACCAGGGTTGTGGA+AGG | + | chr3.2:72934599-72934618 | None:intergenic | 50.0% | |
| ACTTTCGACCACAGTCATCC+AGG | + | chr3.2:72933080-72933099 | None:intergenic | 50.0% | |
| CATGCAAGTCCTAGCAAGAC+AGG | - | chr3.2:72934751-72934770 | MS.gene77561:intron | 50.0% | |
| CATGTCACCCAATGAGCCAT+CGG | + | chr3.2:72934563-72934582 | None:intergenic | 50.0% | |
| CCAATGACACCATGGTACTG+AGG | - | chr3.2:72933363-72933382 | MS.gene77561:intron | 50.0% | |
| CTACCATCACCAGAACTGTC+AGG | + | chr3.2:72933619-72933638 | None:intergenic | 50.0% | |
| GAAGACTGTGGAGTGAACTG+AGG | + | chr3.2:72931186-72931205 | None:intergenic | 50.0% | |
| GCCAAGACCAAATCTACCAC+TGG | + | chr3.2:72933249-72933268 | None:intergenic | 50.0% | |
| GCTGAAGCTAGATTGGAGGT+TGG | - | chr3.2:72931450-72931469 | MS.gene77561:intron | 50.0% | |
| GGGCTGGAAATAGCTTCTAC+AGG | - | chr3.2:72933123-72933142 | MS.gene77561:intron | 50.0% | |
| GTATGACATACAGCCGACCT+TGG | + | chr3.2:72935238-72935257 | None:intergenic | 50.0% | |
| TCGTGGACCAGTGGTAGATT+TGG | - | chr3.2:72933239-72933258 | MS.gene77561:intron | 50.0% | |
| TGAGCACTAGATGTGACTCC+AGG | + | chr3.2:72934060-72934079 | None:intergenic | 50.0% | |
| TGCAGGAAAGGAATTACCGG+CGG | - | chr3.2:72933010-72933029 | MS.gene77561:intron | 50.0% | |
| TTCCATTCCTTCCACAACCC+TGG | - | chr3.2:72934589-72934608 | MS.gene77561:intron | 50.0% | |
| TTTGGAGACACTTTCCTGCG+AGG | + | chr3.2:72931223-72931242 | None:intergenic | 50.0% | |
| ! | ACTCCTGACAGTTCTGGTGA+TGG | - | chr3.2:72933613-72933632 | MS.gene77561:intron | 50.0% |
| ! | ATGGGCTGAAGCTAGATTGG+AGG | - | chr3.2:72931446-72931465 | MS.gene77561:intron | 50.0% |
| ! | CAGATGAGGCTGTTTCATGG+GGG | - | chr3.2:72934905-72934924 | MS.gene77561:CDS | 50.0% |
| ! | CCAGATGAGGCTGTTTCATG+GGG | - | chr3.2:72934904-72934923 | MS.gene77561:CDS | 50.0% |
| ! | GTCCAGATGAGGCTGTTTCA+TGG | - | chr3.2:72934902-72934921 | MS.gene77561:CDS | 50.0% |
| !! | ACAGTTCTGGTGATGGTAGC+CGG | - | chr3.2:72933620-72933639 | MS.gene77561:intron | 50.0% |
| !! | CCAGGCATCGACAAAAACCA+AGG | + | chr3.2:72934042-72934061 | None:intergenic | 50.0% |
| !! | CCTCAGTACCATGGTGTCAT+TGG | + | chr3.2:72933366-72933385 | None:intergenic | 50.0% |
| !! | CCTTGGTTTTTGTCGATGCC+TGG | - | chr3.2:72934039-72934058 | MS.gene77561:CDS | 50.0% |
| !! | TCACTGTAGTCGCTGGTTCA+AGG | + | chr3.2:72933992-72934011 | None:intergenic | 50.0% |
| AGGTCTAAACCTCGAGCCAC+CGG | + | chr3.2:72932749-72932768 | None:intergenic | 55.0% | |
| CCACAACCCTGGTCTGATTG+TGG | - | chr3.2:72934600-72934619 | MS.gene77561:intron | 55.0% | |
| CCACAATCAGACCAGGGTTG+TGG | + | chr3.2:72934603-72934622 | None:intergenic | 55.0% | |
| CCCCATGAAACAGCCTCATC+TGG | + | chr3.2:72934907-72934926 | None:intergenic | 55.0% | |
| CGTTGTGGGGAAGTAGTTCG+TGG | - | chr3.2:72933222-72933241 | MS.gene77561:intron | 55.0% | |
| GACCAGGGTTGTGGAAGGAA+TGG | + | chr3.2:72934594-72934613 | None:intergenic | 55.0% | |
| GAGTCTTCCAGACCGGACAT+AGG | + | chr3.2:72932720-72932739 | None:intergenic | 55.0% | |
| GCGCAATGGTGCAGACTATG+CGG | - | chr3.2:72934831-72934850 | MS.gene77561:intron | 55.0% | |
| GGAAGTAGTTCGTGGACCAG+TGG | - | chr3.2:72933230-72933249 | MS.gene77561:intron | 55.0% | |
| GGTTGCTACCTGGATGACTG+TGG | - | chr3.2:72933069-72933088 | MS.gene77561:intron | 55.0% | |
| GTACTCGGAGTCTTCCAGAC+CGG | + | chr3.2:72932727-72932746 | None:intergenic | 55.0% | |
| GTCTGGAAGACTCCGAGTAC+CGG | - | chr3.2:72932727-72932746 | MS.gene77561:intron | 55.0% | |
| TGGATGGTTTGACCGGGAAC+CGG | - | chr3.2:72932693-72932712 | MS.gene77561:intron | 55.0% | |
| TTCCAGACCGGACATAGGTC+CGG | + | chr3.2:72932715-72932734 | None:intergenic | 55.0% | |
| !! | GCTGTTGATAATCGACGCCG+CGG | + | chr3.2:72931265-72931284 | None:intergenic | 55.0% |
| !! | TTCTGGAGCTCGTCCAGATG+AGG | - | chr3.2:72934891-72934910 | MS.gene77561:CDS | 55.0% |
| AACCGGACCTATGTCCGGTC+TGG | - | chr3.2:72932710-72932729 | MS.gene77561:intron | 60.0% | |
| AACCTCGAGCCACCGGTACT+CGG | + | chr3.2:72932742-72932761 | None:intergenic | 60.0% | |
| AGCGACACTGACGAGTCGCT+TGG | + | chr3.2:72931916-72931935 | None:intergenic | 60.0% | |
| GGGGGATTGGGTAGCTCAAC+TGG | - | chr3.2:72931768-72931787 | MS.gene77561:intron | 60.0% | |
| !! | TGGAAGACTCCGAGTACCGG+TGG | - | chr3.2:72932730-72932749 | MS.gene77561:intron | 60.0% |
| CCGGACATAGGTCCGGTTCC+CGG | + | chr3.2:72932708-72932727 | None:intergenic | 65.0% | |
| CCGGGAACCGGACCTATGTC+CGG | - | chr3.2:72932705-72932724 | MS.gene77561:intron | 65.0% | |
| !! | CTCCGAGTACCGGTGGCTCG+AGG | - | chr3.2:72932737-72932756 | MS.gene77561:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 72931146 | 72935328 | 72931146 | ID=MS.gene77561 |
| chr3.2 | mRNA | 72931146 | 72935328 | 72931146 | ID=MS.gene77561.t1;Parent=MS.gene77561 |
| chr3.2 | exon | 72935116 | 72935328 | 72935116 | ID=MS.gene77561.t1.exon1;Parent=MS.gene77561.t1 |
| chr3.2 | CDS | 72935116 | 72935328 | 72935116 | ID=cds.MS.gene77561.t1;Parent=MS.gene77561.t1 |
| chr3.2 | exon | 72934850 | 72935017 | 72934850 | ID=MS.gene77561.t1.exon2;Parent=MS.gene77561.t1 |
| chr3.2 | CDS | 72934850 | 72935017 | 72934850 | ID=cds.MS.gene77561.t1;Parent=MS.gene77561.t1 |
| chr3.2 | exon | 72933855 | 72934073 | 72933855 | ID=MS.gene77561.t1.exon3;Parent=MS.gene77561.t1 |
| chr3.2 | CDS | 72933855 | 72934073 | 72933855 | ID=cds.MS.gene77561.t1;Parent=MS.gene77561.t1 |
| chr3.2 | exon | 72932181 | 72932267 | 72932181 | ID=MS.gene77561.t1.exon4;Parent=MS.gene77561.t1 |
| chr3.2 | CDS | 72932181 | 72932267 | 72932181 | ID=cds.MS.gene77561.t1;Parent=MS.gene77561.t1 |
| chr3.2 | exon | 72931840 | 72931945 | 72931840 | ID=MS.gene77561.t1.exon5;Parent=MS.gene77561.t1 |
| chr3.2 | CDS | 72931840 | 72931945 | 72931840 | ID=cds.MS.gene77561.t1;Parent=MS.gene77561.t1 |
| chr3.2 | exon | 72931517 | 72931752 | 72931517 | ID=MS.gene77561.t1.exon6;Parent=MS.gene77561.t1 |
| chr3.2 | CDS | 72931517 | 72931752 | 72931517 | ID=cds.MS.gene77561.t1;Parent=MS.gene77561.t1 |
| chr3.2 | exon | 72931275 | 72931390 | 72931275 | ID=MS.gene77561.t1.exon7;Parent=MS.gene77561.t1 |
| chr3.2 | CDS | 72931275 | 72931390 | 72931275 | ID=cds.MS.gene77561.t1;Parent=MS.gene77561.t1 |
| chr3.2 | exon | 72931146 | 72931188 | 72931146 | ID=MS.gene77561.t1.exon8;Parent=MS.gene77561.t1 |
| chr3.2 | CDS | 72931146 | 72931188 | 72931146 | ID=cds.MS.gene77561.t1;Parent=MS.gene77561.t1 |
| Gene Sequence |
| Protein sequence |
