Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23588.t1 | XP_024629049.1 | 98.4 | 365 | 6 | 0 | 1 | 365 | 1 | 365 | 1.90E-191 | 678.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23588.t1 | P40941 | 74.8 | 385 | 77 | 3 | 1 | 365 | 1 | 385 | 1.9e-158 | 560.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23588.t1 | G7LDP4 | 98.4 | 365 | 6 | 0 | 1 | 365 | 35 | 399 | 1.4e-191 | 678.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049757 | MS.gene23588 | -0.819918 | 9.02E-53 | -1.69E-46 |
| MS.gene050133 | MS.gene23588 | 0.826896 | 2.11E-54 | -1.69E-46 |
| MS.gene050315 | MS.gene23588 | -0.826763 | 2.27E-54 | -1.69E-46 |
| MS.gene050553 | MS.gene23588 | -0.804429 | 2.17E-49 | -1.69E-46 |
| MS.gene050710 | MS.gene23588 | 0.802049 | 6.75E-49 | -1.69E-46 |
| MS.gene050874 | MS.gene23588 | 0.827414 | 1.59E-54 | -1.69E-46 |
| MS.gene050875 | MS.gene23588 | 0.832987 | 6.91E-56 | -1.69E-46 |
| MS.gene051439 | MS.gene23588 | 0.809503 | 1.83E-50 | -1.69E-46 |
| MS.gene051552 | MS.gene23588 | 0.812209 | 4.76E-51 | -1.69E-46 |
| MS.gene051838 | MS.gene23588 | -0.814599 | 1.42E-51 | -1.69E-46 |
| MS.gene051914 | MS.gene23588 | 0.80278 | 4.77E-49 | -1.69E-46 |
| MS.gene052100 | MS.gene23588 | -0.816603 | 5.08E-52 | -1.69E-46 |
| MS.gene052469 | MS.gene23588 | -0.822344 | 2.49E-53 | -1.69E-46 |
| MS.gene054107 | MS.gene23588 | -0.816318 | 5.88E-52 | -1.69E-46 |
| MS.gene054662 | MS.gene23588 | 0.823652 | 1.23E-53 | -1.69E-46 |
| MS.gene055159 | MS.gene23588 | 0.815019 | 1.15E-51 | -1.69E-46 |
| MS.gene056387 | MS.gene23588 | -0.802083 | 6.64E-49 | -1.69E-46 |
| MS.gene05652 | MS.gene23588 | 0.81363 | 2.32E-51 | -1.69E-46 |
| MS.gene056678 | MS.gene23588 | 0.806148 | 9.47E-50 | -1.69E-46 |
| MS.gene057081 | MS.gene23588 | 0.825637 | 4.21E-54 | -1.69E-46 |
| MS.gene057494 | MS.gene23588 | 0.802744 | 4.85E-49 | -1.69E-46 |
| MS.gene058418 | MS.gene23588 | 0.825102 | 5.63E-54 | -1.69E-46 |
| MS.gene05926 | MS.gene23588 | 0.829962 | 3.84E-55 | -1.69E-46 |
| MS.gene05960 | MS.gene23588 | 0.818318 | 2.09E-52 | -1.69E-46 |
| MS.gene059717 | MS.gene23588 | -0.826264 | 2.98E-54 | -1.69E-46 |
| MS.gene060087 | MS.gene23588 | 0.809793 | 1.59E-50 | -1.69E-46 |
| MS.gene06080 | MS.gene23588 | 0.814653 | 1.38E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene51070 | MS.gene23588 | PPI |
| MS.gene016690 | MS.gene23588 | PPI |
| MS.gene23588 | MS.gene016690 | PPI |
| MS.gene84203 | MS.gene23588 | PPI |
| MS.gene78433 | MS.gene23588 | PPI |
| MS.gene046998 | MS.gene23588 | PPI |
| MS.gene23588 | MS.gene46786 | PPI |
| MS.gene012807 | MS.gene23588 | PPI |
| MS.gene065946 | MS.gene23588 | PPI |
| MS.gene60471 | MS.gene23588 | PPI |
| MS.gene32809 | MS.gene23588 | PPI |
| MS.gene040118 | MS.gene23588 | PPI |
| MS.gene94558 | MS.gene23588 | PPI |
| MS.gene057845 | MS.gene23588 | PPI |
| MS.gene037500 | MS.gene23588 | PPI |
| MS.gene93756 | MS.gene23588 | PPI |
| MS.gene82276 | MS.gene23588 | PPI |
| MS.gene015010 | MS.gene23588 | PPI |
| MS.gene037505 | MS.gene23588 | PPI |
| MS.gene23588 | MS.gene045584 | PPI |
| MS.gene065947 | MS.gene23588 | PPI |
| MS.gene79071 | MS.gene23588 | PPI |
| MS.gene37419 | MS.gene23588 | PPI |
| MS.gene77337 | MS.gene23588 | PPI |
| MS.gene23588 | MS.gene82276 | PPI |
| MS.gene006614 | MS.gene23588 | PPI |
| MS.gene23588 | MS.gene031696 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23588.t1 | MTR_8g036880 | 98.356 | 365 | 6 | 0 | 1 | 365 | 35 | 399 | 0.0 | 734 |
| MS.gene23588.t1 | MTR_3g028590 | 82.308 | 390 | 43 | 4 | 1 | 365 | 5 | 393 | 0.0 | 616 |
| MS.gene23588.t1 | MTR_3g028590 | 82.308 | 390 | 43 | 4 | 1 | 365 | 1 | 389 | 0.0 | 615 |
| MS.gene23588.t1 | MTR_4g078545 | 75.134 | 374 | 79 | 5 | 1 | 364 | 1 | 370 | 0.0 | 525 |
| MS.gene23588.t1 | MTR_2g098070 | 73.481 | 362 | 87 | 3 | 6 | 365 | 8 | 362 | 4.26e-176 | 494 |
| MS.gene23588.t1 | MTR_8g107270 | 59.722 | 288 | 115 | 1 | 67 | 354 | 17 | 303 | 7.02e-126 | 365 |
| MS.gene23588.t1 | MTR_3g104500 | 39.604 | 303 | 170 | 7 | 63 | 358 | 29 | 325 | 7.98e-69 | 219 |
| MS.gene23588.t1 | MTR_3g104600 | 30.868 | 311 | 178 | 9 | 64 | 352 | 31 | 326 | 1.06e-33 | 128 |
| MS.gene23588.t1 | MTR_6g091800 | 28.094 | 299 | 195 | 7 | 64 | 352 | 15 | 303 | 2.73e-30 | 118 |
| MS.gene23588.t1 | MTR_8g027975 | 28.618 | 304 | 179 | 9 | 62 | 339 | 45 | 336 | 5.66e-27 | 110 |
| MS.gene23588.t1 | MTR_8g027975 | 26.108 | 203 | 132 | 6 | 71 | 261 | 157 | 353 | 7.65e-11 | 63.2 |
| MS.gene23588.t1 | MTR_5g009500 | 28.197 | 305 | 167 | 9 | 67 | 339 | 37 | 321 | 6.80e-27 | 109 |
| MS.gene23588.t1 | MTR_6g091800 | 26.316 | 323 | 194 | 7 | 64 | 352 | 15 | 327 | 8.31e-27 | 109 |
| MS.gene23588.t1 | MTR_6g091800 | 28.137 | 263 | 172 | 6 | 64 | 320 | 15 | 266 | 3.01e-26 | 106 |
| MS.gene23588.t1 | MTR_7g064980 | 27.815 | 302 | 198 | 8 | 65 | 355 | 22 | 314 | 1.67e-25 | 105 |
| MS.gene23588.t1 | MTR_6g091800 | 29.388 | 245 | 157 | 5 | 64 | 302 | 15 | 249 | 1.69e-25 | 103 |
| MS.gene23588.t1 | MTR_6g091800 | 26.299 | 308 | 184 | 6 | 64 | 338 | 15 | 312 | 1.83e-25 | 105 |
| MS.gene23588.t1 | MTR_7g068340 | 30.634 | 284 | 165 | 9 | 79 | 355 | 98 | 356 | 9.39e-25 | 104 |
| MS.gene23588.t1 | MTR_1g012030 | 29.329 | 283 | 171 | 9 | 68 | 344 | 139 | 398 | 1.27e-24 | 104 |
| MS.gene23588.t1 | MTR_1g012030 | 28.774 | 212 | 127 | 7 | 56 | 262 | 219 | 411 | 6.34e-14 | 72.8 |
| MS.gene23588.t1 | MTR_3g107510 | 27.148 | 291 | 186 | 9 | 71 | 356 | 125 | 394 | 2.61e-24 | 103 |
| MS.gene23588.t1 | MTR_3g107510 | 28.440 | 218 | 132 | 7 | 56 | 268 | 202 | 400 | 4.20e-15 | 76.3 |
| MS.gene23588.t1 | MTR_7g084400 | 29.553 | 291 | 161 | 7 | 68 | 344 | 213 | 473 | 4.43e-24 | 103 |
| MS.gene23588.t1 | MTR_8g096050 | 28.975 | 283 | 176 | 8 | 68 | 344 | 227 | 490 | 5.45e-24 | 103 |
| MS.gene23588.t1 | MTR_3g098460 | 28.269 | 283 | 178 | 8 | 68 | 344 | 205 | 468 | 6.08e-23 | 100 |
| MS.gene23588.t1 | MTR_5g081150 | 24.919 | 309 | 210 | 8 | 58 | 355 | 24 | 321 | 8.44e-23 | 97.8 |
| MS.gene23588.t1 | MTR_6g091800 | 26.132 | 287 | 171 | 6 | 64 | 320 | 15 | 290 | 9.07e-23 | 97.4 |
| MS.gene23588.t1 | MTR_4g114320 | 25.000 | 300 | 162 | 7 | 68 | 344 | 123 | 382 | 2.22e-22 | 97.8 |
| MS.gene23588.t1 | MTR_4g114320 | 27.619 | 210 | 127 | 5 | 58 | 262 | 206 | 395 | 1.53e-15 | 77.8 |
| MS.gene23588.t1 | MTR_4g119770 | 25.455 | 330 | 198 | 8 | 58 | 351 | 4 | 321 | 2.70e-22 | 96.7 |
| MS.gene23588.t1 | MTR_2g436930 | 27.476 | 313 | 181 | 9 | 71 | 349 | 18 | 318 | 4.29e-22 | 95.9 |
| MS.gene23588.t1 | MTR_6g091800 | 27.138 | 269 | 156 | 5 | 64 | 302 | 15 | 273 | 4.34e-22 | 95.1 |
| MS.gene23588.t1 | MTR_4g016730 | 30.619 | 307 | 172 | 11 | 52 | 349 | 75 | 349 | 5.03e-22 | 96.3 |
| MS.gene23588.t1 | MTR_6g092210 | 27.386 | 241 | 168 | 4 | 116 | 352 | 6 | 243 | 2.68e-21 | 92.4 |
| MS.gene23588.t1 | MTR_6g034145 | 27.935 | 247 | 165 | 6 | 116 | 352 | 6 | 249 | 1.27e-20 | 90.5 |
| MS.gene23588.t1 | MTR_6g091800 | 30.055 | 183 | 113 | 4 | 64 | 240 | 15 | 188 | 1.44e-20 | 88.6 |
| MS.gene23588.t1 | MTR_3g074490 | 26.936 | 297 | 170 | 10 | 71 | 344 | 119 | 391 | 2.27e-18 | 86.3 |
| MS.gene23588.t1 | MTR_5g030530 | 27.241 | 290 | 187 | 10 | 62 | 339 | 2 | 279 | 2.01e-17 | 82.0 |
| MS.gene23588.t1 | MTR_6g091800 | 27.053 | 207 | 112 | 4 | 64 | 240 | 15 | 212 | 3.94e-17 | 79.7 |
| MS.gene23588.t1 | MTR_4g119770 | 25.373 | 268 | 163 | 6 | 58 | 300 | 4 | 259 | 6.22e-17 | 80.1 |
| MS.gene23588.t1 | MTR_4g005330 | 24.503 | 302 | 183 | 8 | 65 | 344 | 63 | 341 | 8.97e-17 | 80.9 |
| MS.gene23588.t1 | MTR_8g066975 | 26.207 | 290 | 190 | 9 | 62 | 339 | 2 | 279 | 7.64e-16 | 77.4 |
| MS.gene23588.t1 | MTR_4g012850 | 27.049 | 244 | 163 | 5 | 113 | 349 | 51 | 286 | 9.52e-16 | 77.4 |
| MS.gene23588.t1 | MTR_4g005330 | 24.324 | 296 | 179 | 8 | 71 | 344 | 3 | 275 | 1.19e-15 | 77.0 |
| MS.gene23588.t1 | MTR_2g102010 | 24.662 | 296 | 200 | 7 | 63 | 349 | 7 | 288 | 5.85e-15 | 75.1 |
| MS.gene23588.t1 | MTR_3g100570 | 25.418 | 299 | 181 | 10 | 68 | 337 | 6 | 291 | 1.27e-14 | 74.3 |
| MS.gene23588.t1 | MTR_6g091910 | 26.238 | 202 | 137 | 4 | 64 | 261 | 15 | 208 | 1.81e-14 | 72.0 |
| MS.gene23588.t1 | MTR_1g090330 | 21.691 | 272 | 200 | 5 | 63 | 330 | 9 | 271 | 2.34e-14 | 73.2 |
| MS.gene23588.t1 | MTR_7g084400 | 29.949 | 197 | 111 | 4 | 68 | 258 | 207 | 382 | 3.12e-14 | 73.9 |
| MS.gene23588.t1 | MTR_7g066690 | 24.453 | 274 | 189 | 7 | 63 | 330 | 12 | 273 | 3.25e-14 | 72.8 |
| MS.gene23588.t1 | MTR_4g018750 | 24.638 | 276 | 186 | 9 | 63 | 330 | 10 | 271 | 4.49e-13 | 69.7 |
| MS.gene23588.t1 | MTR_5g081150 | 27.586 | 145 | 99 | 2 | 58 | 198 | 24 | 166 | 5.28e-13 | 68.6 |
| MS.gene23588.t1 | MTR_5g081150 | 27.586 | 145 | 99 | 2 | 58 | 198 | 24 | 166 | 5.56e-13 | 68.6 |
| MS.gene23588.t1 | MTR_8g090210 | 23.232 | 297 | 181 | 9 | 71 | 344 | 113 | 385 | 1.16e-12 | 68.9 |
| MS.gene23588.t1 | MTR_2g436930 | 28.571 | 196 | 112 | 5 | 175 | 349 | 40 | 228 | 2.10e-12 | 66.6 |
| MS.gene23588.t1 | MTR_1g088995 | 24.638 | 276 | 170 | 8 | 67 | 330 | 32 | 281 | 2.91e-11 | 64.3 |
| MS.gene23588.t1 | MTR_4g018750 | 24.514 | 257 | 172 | 9 | 74 | 322 | 21 | 263 | 4.30e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23588.t1 | AT5G13490 | 79.221 | 385 | 60 | 3 | 1 | 365 | 1 | 385 | 0.0 | 588 |
| MS.gene23588.t1 | AT5G13490 | 79.221 | 385 | 60 | 3 | 1 | 365 | 1 | 385 | 0.0 | 588 |
| MS.gene23588.t1 | AT3G08580 | 81.984 | 383 | 49 | 5 | 1 | 365 | 1 | 381 | 0.0 | 575 |
| MS.gene23588.t1 | AT3G08580 | 81.984 | 383 | 49 | 5 | 1 | 365 | 1 | 381 | 0.0 | 575 |
| MS.gene23588.t1 | AT4G28390 | 74.406 | 379 | 80 | 5 | 2 | 364 | 1 | 378 | 0.0 | 528 |
| MS.gene23588.t1 | AT4G28390 | 74.406 | 379 | 80 | 5 | 2 | 364 | 1 | 378 | 0.0 | 528 |
| MS.gene23588.t1 | AT5G17400 | 62.887 | 291 | 107 | 1 | 64 | 354 | 10 | 299 | 7.19e-130 | 374 |
| MS.gene23588.t1 | AT5G56450 | 38.710 | 310 | 170 | 7 | 55 | 352 | 21 | 322 | 6.36e-67 | 214 |
| MS.gene23588.t1 | AT2G37890 | 29.846 | 325 | 207 | 8 | 43 | 355 | 17 | 332 | 4.22e-32 | 123 |
| MS.gene23588.t1 | AT4G26180 | 31.650 | 297 | 171 | 10 | 64 | 344 | 17 | 297 | 1.60e-31 | 122 |
| MS.gene23588.t1 | AT3G55640 | 28.041 | 296 | 195 | 7 | 67 | 353 | 37 | 323 | 2.24e-31 | 121 |
| MS.gene23588.t1 | AT3G55640 | 25.628 | 199 | 129 | 4 | 63 | 258 | 140 | 322 | 5.78e-13 | 69.7 |
| MS.gene23588.t1 | AT3G55640 | 28.041 | 296 | 195 | 7 | 67 | 353 | 37 | 323 | 2.24e-31 | 121 |
| MS.gene23588.t1 | AT3G55640 | 25.628 | 199 | 129 | 4 | 63 | 258 | 140 | 322 | 5.78e-13 | 69.7 |
| MS.gene23588.t1 | AT4G26180 | 31.959 | 291 | 166 | 10 | 64 | 338 | 17 | 291 | 9.70e-31 | 119 |
| MS.gene23588.t1 | AT1G14560 | 30.605 | 281 | 170 | 7 | 79 | 344 | 38 | 308 | 1.73e-30 | 119 |
| MS.gene23588.t1 | AT1G14560 | 30.909 | 275 | 165 | 7 | 79 | 338 | 38 | 302 | 8.59e-30 | 116 |
| MS.gene23588.t1 | AT3G53940 | 30.068 | 296 | 186 | 8 | 60 | 344 | 63 | 348 | 2.32e-29 | 116 |
| MS.gene23588.t1 | AT3G53940 | 27.619 | 210 | 129 | 5 | 61 | 263 | 169 | 362 | 1.69e-13 | 71.2 |
| MS.gene23588.t1 | AT3G51870 | 30.986 | 284 | 164 | 9 | 79 | 355 | 102 | 360 | 1.89e-26 | 108 |
| MS.gene23588.t1 | AT4G01100 | 27.508 | 309 | 168 | 9 | 71 | 344 | 45 | 332 | 3.68e-26 | 107 |
| MS.gene23588.t1 | AT5G01500 | 29.927 | 274 | 168 | 9 | 79 | 349 | 130 | 382 | 5.04e-25 | 105 |
| MS.gene23588.t1 | AT4G32400 | 29.078 | 282 | 173 | 9 | 68 | 344 | 114 | 373 | 7.72e-25 | 104 |
| MS.gene23588.t1 | AT4G01100 | 27.707 | 314 | 175 | 10 | 71 | 344 | 45 | 346 | 1.91e-24 | 103 |
| MS.gene23588.t1 | AT4G01100 | 26.733 | 303 | 166 | 9 | 77 | 344 | 1 | 282 | 5.24e-24 | 100 |
| MS.gene23588.t1 | AT5G51050 | 29.537 | 281 | 174 | 7 | 68 | 344 | 223 | 483 | 2.18e-23 | 101 |
| MS.gene23588.t1 | AT3G21390 | 26.852 | 324 | 197 | 7 | 58 | 349 | 9 | 324 | 8.87e-22 | 95.1 |
| MS.gene23588.t1 | AT5G61810 | 27.273 | 297 | 184 | 7 | 52 | 344 | 52 | 320 | 9.78e-22 | 95.1 |
| MS.gene23588.t1 | AT3G21390 | 26.852 | 324 | 197 | 7 | 58 | 349 | 31 | 346 | 1.23e-21 | 95.1 |
| MS.gene23588.t1 | AT5G61810 | 26.578 | 301 | 181 | 7 | 52 | 344 | 195 | 463 | 5.13e-21 | 94.4 |
| MS.gene23588.t1 | AT3G20240 | 24.324 | 296 | 187 | 6 | 67 | 344 | 51 | 327 | 1.01e-20 | 92.4 |
| MS.gene23588.t1 | AT5G07320 | 27.306 | 271 | 170 | 6 | 77 | 344 | 218 | 464 | 1.43e-20 | 93.2 |
| MS.gene23588.t1 | AT3G55640 | 28.061 | 196 | 128 | 3 | 67 | 258 | 37 | 223 | 2.27e-20 | 89.7 |
| MS.gene23588.t1 | AT3G55640 | 28.061 | 196 | 128 | 3 | 67 | 258 | 37 | 223 | 2.27e-20 | 89.7 |
| MS.gene23588.t1 | AT1G14560 | 31.915 | 188 | 112 | 5 | 172 | 344 | 24 | 210 | 2.79e-20 | 89.0 |
| MS.gene23588.t1 | AT5G48970 | 25.153 | 326 | 201 | 8 | 58 | 349 | 12 | 328 | 4.13e-19 | 87.8 |
| MS.gene23588.t1 | AT3G53940 | 29.386 | 228 | 143 | 6 | 60 | 279 | 63 | 280 | 3.32e-18 | 84.3 |
| MS.gene23588.t1 | AT5G46800 | 28.125 | 288 | 180 | 10 | 67 | 339 | 7 | 282 | 5.76e-16 | 78.2 |
| MS.gene23588.t1 | AT5G46800 | 28.125 | 288 | 180 | 10 | 67 | 339 | 7 | 282 | 5.76e-16 | 78.2 |
| MS.gene23588.t1 | AT5G46800 | 28.125 | 288 | 180 | 10 | 67 | 339 | 7 | 282 | 5.76e-16 | 78.2 |
| MS.gene23588.t1 | AT5G64970 | 25.676 | 296 | 175 | 9 | 71 | 344 | 138 | 410 | 6.50e-15 | 75.9 |
| MS.gene23588.t1 | AT5G64970 | 25.000 | 296 | 177 | 9 | 71 | 344 | 14 | 286 | 2.49e-14 | 73.2 |
| MS.gene23588.t1 | AT5G64970 | 25.952 | 289 | 169 | 9 | 71 | 337 | 138 | 403 | 6.32e-14 | 72.8 |
| MS.gene23588.t1 | AT5G48970 | 25.098 | 255 | 157 | 7 | 121 | 349 | 11 | 257 | 1.87e-13 | 70.1 |
| MS.gene23588.t1 | AT3G54110 | 23.792 | 269 | 187 | 8 | 68 | 330 | 15 | 271 | 2.24e-13 | 70.5 |
| MS.gene23588.t1 | AT1G14140 | 23.420 | 269 | 190 | 7 | 68 | 330 | 16 | 274 | 9.73e-13 | 68.6 |
| MS.gene23588.t1 | AT1G14140 | 27.411 | 197 | 128 | 5 | 173 | 359 | 18 | 209 | 7.42e-11 | 63.2 |
| MS.gene23588.t1 | AT5G58970 | 23.973 | 292 | 192 | 8 | 58 | 337 | 6 | 279 | 1.26e-12 | 68.2 |
| MS.gene23588.t1 | AT5G66380 | 27.136 | 199 | 134 | 5 | 166 | 359 | 5 | 197 | 1.65e-12 | 67.8 |
| MS.gene23588.t1 | AT1G79900 | 26.860 | 242 | 153 | 7 | 115 | 349 | 53 | 277 | 4.68e-12 | 66.6 |
| MS.gene23588.t1 | AT5G01340 | 27.473 | 182 | 115 | 4 | 59 | 236 | 106 | 274 | 1.21e-11 | 65.5 |
| MS.gene23588.t1 | AT2G33820 | 22.623 | 305 | 218 | 7 | 64 | 359 | 14 | 309 | 1.49e-11 | 65.1 |
| MS.gene23588.t1 | AT1G78180 | 24.000 | 300 | 175 | 8 | 71 | 344 | 131 | 403 | 9.07e-11 | 63.5 |
Find 117 sgRNAs with CRISPR-Local
Find 149 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGTGCTAAGTCCTTGTTTA+AGG | 0.144348 | 8.4:-60931142 | MS.gene23588:CDS |
| TAATCATCTCATCCTGGTTT+TGG | 0.193782 | 8.4:+60932643 | None:intergenic |
| TTGAAGCCAGTTCTCCTTAC+TGG | 0.211857 | 8.4:-60931873 | MS.gene23588:CDS |
| TTCTTTGCTAGCTTTGGTCT+TGG | 0.283922 | 8.4:-60931300 | MS.gene23588:CDS |
| GGCTTTGAACTTTGCATTCA+AGG | 0.320951 | 8.4:-60932216 | MS.gene23588:CDS |
| GCGGGAGCTGCAACAAAGAT+AGG | 0.324862 | 8.4:+60932765 | None:intergenic |
| CTTCTCCTAACTGTGTCAAT+TGG | 0.336850 | 8.4:+60931240 | None:intergenic |
| CCTCGTTCTTGAGGATTTGT+TGG | 0.337740 | 8.4:+60931163 | None:intergenic |
| GATAGTTTCTTTGCTAGCTT+TGG | 0.347055 | 8.4:-60931306 | MS.gene23588:CDS |
| ACAAGGATGGTTACTGGAAA+TGG | 0.366913 | 8.4:-60932160 | MS.gene23588:CDS |
| AGAAGGACAAGGATGGTTAC+TGG | 0.382727 | 8.4:-60932166 | MS.gene23588:CDS |
| CTTTGTTGTTGACTTTCTCA+TGG | 0.384159 | 8.4:-60932730 | MS.gene23588:CDS |
| CAAAAGCTTAATTCGTTCAA+TGG | 0.387505 | 8.4:+60932668 | None:intergenic |
| CTGGCAACTGATGGTATTGC+TGG | 0.388315 | 8.4:-60931972 | MS.gene23588:CDS |
| ATGTACCAAAGGAGGTCATT+TGG | 0.389033 | 8.4:-60932855 | MS.gene23588:CDS |
| CCACATTCTGAACAAGATTA+GGG | 0.392654 | 8.4:+60932898 | None:intergenic |
| CTCCGTGCCGTCGCTGGTGC+TGG | 0.395301 | 8.4:-60931102 | MS.gene23588:CDS |
| TTGGCCTCAGGAGGTGCTGC+TGG | 0.402435 | 8.4:-60932125 | MS.gene23588:CDS |
| ACAGTCACCGATTCCCTTGT+AGG | 0.403293 | 8.4:+60932599 | None:intergenic |
| CGCTGGTTACGACAAGTTAC+AGG | 0.404370 | 8.4:-60931073 | MS.gene23588:CDS |
| AACATCCTCCGTGCCGTCGC+TGG | 0.404618 | 8.4:-60931108 | MS.gene23588:CDS |
| TGTACCAAAGGAGGTCATTT+GGG | 0.407077 | 8.4:-60932854 | MS.gene23588:CDS |
| GCCACATTCTGAACAAGATT+AGG | 0.408359 | 8.4:+60932897 | None:intergenic |
| GAAAGTCACCATGGTTGATC+AGG | 0.415292 | 8.4:-60932928 | None:intergenic |
| GGTGCTAAGTCCTTGTTTAA+GGG | 0.416541 | 8.4:-60931141 | MS.gene23588:CDS |
| GCGTTACATGCTGGCATCAT+TGG | 0.421080 | 8.4:+60932804 | None:intergenic |
| CTTACCCAATTGACACAGTT+AGG | 0.421944 | 8.4:-60931245 | MS.gene23588:CDS |
| TTGCTAGCTTTGGTCTTGGA+TGG | 0.425017 | 8.4:-60931296 | MS.gene23588:CDS |
| TGGCTCATCACCAATGGTGC+AGG | 0.431380 | 8.4:-60931276 | MS.gene23588:CDS |
| TTCTCCTAACTGTGTCAATT+GGG | 0.432018 | 8.4:+60931241 | None:intergenic |
| GAAATGGTTTGCTGGAAACT+TGG | 0.433799 | 8.4:-60932144 | MS.gene23588:CDS |
| CAAGGGAGTAGACAAAGAAA+AGG | 0.433806 | 8.4:+60932093 | None:intergenic |
| AACTCCCAAATGACCTCCTT+TGG | 0.434011 | 8.4:+60932850 | None:intergenic |
| AAAAGCTTAATTCGTTCAAT+GGG | 0.436520 | 8.4:+60932669 | None:intergenic |
| AAGTCCTTGTTTAAGGGAGC+TGG | 0.439974 | 8.4:-60931135 | MS.gene23588:CDS |
| CTTTGCATCATTTGCTAGAC+GGG | 0.443087 | 8.4:+60932058 | None:intergenic |
| GGTTACTGGAAATGGTTTGC+TGG | 0.444417 | 8.4:-60932152 | MS.gene23588:CDS |
| ATCATTGGATACTGAAATGC+AGG | 0.450957 | 8.4:+60932819 | None:intergenic |
| AGAAGAATGATGATGACATC+TGG | 0.454405 | 8.4:-60931222 | MS.gene23588:CDS |
| AGAGATCCAGTAAGGAGAAC+TGG | 0.459442 | 8.4:+60931867 | None:intergenic |
| AAGCGAACAACGGCCGATGA+AGG | 0.465896 | 8.4:-60932573 | MS.gene23588:CDS |
| GTTGTTGCAGCGTTACATGC+TGG | 0.471689 | 8.4:+60932795 | None:intergenic |
| TCTCCTTACTGGATCTCTGC+AGG | 0.476142 | 8.4:-60931862 | MS.gene23588:intron |
| AGATGCTAGCCCTGCACCAT+TGG | 0.477482 | 8.4:+60931266 | None:intergenic |
| GTTGCAGCTCCCGCTGAGAA+AGG | 0.477911 | 8.4:-60932756 | MS.gene23588:CDS |
| CGGGAGCTGCAACAAAGATA+GGG | 0.484005 | 8.4:+60932766 | None:intergenic |
| TTGCGGTGTTACCTCTCCAT+AGG | 0.487772 | 8.4:+60932541 | None:intergenic |
| GTGTATCGTGGTCTCTACTT+TGG | 0.490767 | 8.4:-60931909 | MS.gene23588:CDS |
| CAGCTTTAATCATCTCATCC+TGG | 0.491287 | 8.4:+60932637 | None:intergenic |
| TTTGCTGGAAACTTGGCCTC+AGG | 0.497193 | 8.4:-60932137 | MS.gene23588:CDS |
| AGTAAGGAGAACTGGCTTCA+AGG | 0.497841 | 8.4:+60931875 | None:intergenic |
| GTTGTTGACTTTCTCATGGG+TGG | 0.497881 | 8.4:-60932726 | MS.gene23588:CDS |
| AGAACTCAACTAACCTGAGT+AGG | 0.498897 | 8.4:+60932501 | None:intergenic |
| TTTGTTGTTGACTTTCTCAT+GGG | 0.500591 | 8.4:-60932729 | MS.gene23588:CDS |
| GATGCAAAGGCTGCAAAGAA+AGG | 0.508474 | 8.4:-60932044 | MS.gene23588:CDS |
| CATCCGTTATTTCCCTACTC+AGG | 0.512437 | 8.4:-60932514 | MS.gene23588:intron |
| GCTGGTGCTGGTGTGCTCGC+TGG | 0.514183 | 8.4:-60931090 | MS.gene23588:CDS |
| ACAAAGTTTCCTTTCTCAGC+GGG | 0.514560 | 8.4:+60932747 | None:intergenic |
| AGATGTTGAAACCACGGTAA+AGG | 0.516865 | 8.4:+60931949 | None:intergenic |
| CTCGGCAAGAAGTACGGATC+CGG | 0.520238 | 8.4:-60931042 | MS.gene23588:CDS |
| TAACCTGAGTAGGGAAATAA+CGG | 0.524143 | 8.4:+60932511 | None:intergenic |
| CCTTTGCATCATTTGCTAGA+CGG | 0.524216 | 8.4:+60932057 | None:intergenic |
| CAGAATGTGGCACGCCAGAC+CGG | 0.524779 | 8.4:-60932885 | MS.gene23588:CDS |
| TCTGAGCCCTACAAGGGAAT+CGG | 0.525862 | 8.4:-60932606 | MS.gene23588:CDS |
| GCTGGAAACTTGGCCTCAGG+AGG | 0.526095 | 8.4:-60932134 | MS.gene23588:CDS |
| TGGATACTGAAATGCAGGGT+TGG | 0.528389 | 8.4:+60932824 | None:intergenic |
| TAGACTTTCTGAGCCCTACA+AGG | 0.529188 | 8.4:-60932613 | MS.gene23588:CDS |
| ATGAAGGTATTGTCTCCCTA+TGG | 0.529311 | 8.4:-60932557 | MS.gene23588:CDS |
| ATAATGCTCGGCAAGAAGTA+CGG | 0.537875 | 8.4:-60931048 | MS.gene23588:CDS |
| TGCGGTGTTACCTCTCCATA+GGG | 0.537902 | 8.4:+60932542 | None:intergenic |
| AAGGCTGCAAAGAAAGGTGC+AGG | 0.538988 | 8.4:-60932038 | MS.gene23588:CDS |
| CAGTCACCGATTCCCTTGTA+GGG | 0.546422 | 8.4:+60932600 | None:intergenic |
| ACTTAGCACCCTCGTTCTTG+AGG | 0.547097 | 8.4:+60931154 | None:intergenic |
| TAGGGAGACAATACCTTCAT+CGG | 0.549059 | 8.4:+60932560 | None:intergenic |
| GGTTTCAACATCTCTTGTGT+CGG | 0.553553 | 8.4:-60931939 | MS.gene23588:CDS |
| AAGGGAGTAGACAAAGAAAA+GGG | 0.554552 | 8.4:+60932094 | None:intergenic |
| TCGTTCAATGGGAGCTGCAG+CGG | 0.558742 | 8.4:+60932680 | None:intergenic |
| GAACTCAACTAACCTGAGTA+GGG | 0.561724 | 8.4:+60932502 | None:intergenic |
| GAAATAACGGATGACATTTG+CGG | 0.563798 | 8.4:+60932524 | None:intergenic |
| CAGGATGAGATGATTAAAGC+TGG | 0.564426 | 8.4:-60932636 | MS.gene23588:CDS |
| AACAAAGTTTCCTTTCTCAG+CGG | 0.567621 | 8.4:+60932746 | None:intergenic |
| CACCAGCACCAGCGACGGCA+CGG | 0.568903 | 8.4:+60931100 | None:intergenic |
| GAGCACACCAGCACCAGCGA+CGG | 0.570287 | 8.4:+60931095 | None:intergenic |
| GACGGGTACGAGCATAGTCA+AGG | 0.572808 | 8.4:+60932075 | None:intergenic |
| CTTGGATGGCTCATCACCAA+TGG | 0.573594 | 8.4:-60931282 | MS.gene23588:CDS |
| GGTACATAGAAAGACCGGTC+TGG | 0.575870 | 8.4:+60932871 | None:intergenic |
| AAGTTACAGGTCATAATGCT+CGG | 0.582137 | 8.4:-60931060 | MS.gene23588:CDS |
| GATTTGTTGGAATGCATCGA+AGG | 0.585302 | 8.4:+60931176 | None:intergenic |
| CCCTAATCTTGTTCAGAATG+TGG | 0.585739 | 8.4:-60932898 | MS.gene23588:CDS |
| CATTCAAGGACTACTTCAAG+AGG | 0.587339 | 8.4:-60932202 | MS.gene23588:CDS |
| CCGGTCTTTCTATGTACCAA+AGG | 0.601233 | 8.4:-60932866 | MS.gene23588:CDS |
| CCGTCTAGCAAATGATGCAA+AGG | 0.603443 | 8.4:-60932057 | MS.gene23588:CDS |
| GGCTCATCACCAATGGTGCA+GGG | 0.604403 | 8.4:-60931275 | MS.gene23588:CDS |
| GAACCTGCAGAGATCCAGTA+AGG | 0.606430 | 8.4:+60931859 | None:intergenic |
| GGCAAGAAGTACGGATCCGG+TGG | 0.611623 | 8.4:-60931039 | MS.gene23588:CDS |
| AAGAAGACACTGGCAACTGA+TGG | 0.618722 | 8.4:-60931981 | MS.gene23588:CDS |
| AATTTCAAGAAGGACAAGGA+TGG | 0.620049 | 8.4:-60932173 | MS.gene23588:CDS |
| AGCACCAGCAGCACCTCCTG+AGG | 0.623751 | 8.4:+60932121 | None:intergenic |
| TTTCAATTTCAAGAAGGACA+AGG | 0.627092 | 8.4:-60932177 | MS.gene23588:CDS |
| CCTTTGGTACATAGAAAGAC+CGG | 0.627821 | 8.4:+60932866 | None:intergenic |
| CACAAGAGATGTTGAAACCA+CGG | 0.637635 | 8.4:+60931943 | None:intergenic |
| GGGAGCTGCAACAAAGATAG+GGG | 0.642711 | 8.4:+60932767 | None:intergenic |
| CCAACAAATCCTCAAGAACG+AGG | 0.645399 | 8.4:-60931163 | MS.gene23588:CDS |
| GCTGCAAAGAAAGGTGCAGG+AGG | 0.645640 | 8.4:-60932035 | MS.gene23588:CDS |
| GGTATTGCTGGCCTTTACCG+TGG | 0.654046 | 8.4:-60931960 | MS.gene23588:CDS |
| AGACTTTCTGAGCCCTACAA+GGG | 0.654879 | 8.4:-60932612 | MS.gene23588:CDS |
| AGCACCAGCTCCCTTAAACA+AGG | 0.655144 | 8.4:+60931131 | None:intergenic |
| GTCGGAATCATTGTGTATCG+TGG | 0.657764 | 8.4:-60931921 | MS.gene23588:CDS |
| GGTATTGTCTCCCTATGGAG+AGG | 0.663367 | 8.4:-60932552 | MS.gene23588:CDS |
| ACGGGTACGAGCATAGTCAA+GGG | 0.668625 | 8.4:+60932076 | None:intergenic |
| GCAGGAGGAAGACAATTCGA+TGG | 0.669093 | 8.4:-60932020 | MS.gene23588:CDS |
| GTCTTTCTATGTACCAAAGG+AGG | 0.674751 | 8.4:-60932863 | MS.gene23588:CDS |
| GCGCTGAACCTGATCAACCA+TGG | 0.682676 | 8.4:+60932920 | None:intergenic |
| CAACAAATCCTCAAGAACGA+GGG | 0.686427 | 8.4:-60931162 | MS.gene23588:CDS |
| CAGCACCAGCGACGGCACGG+AGG | 0.687741 | 8.4:+60931103 | None:intergenic |
| TGATGTCTACAAGAAGACAC+TGG | 0.694165 | 8.4:-60931991 | MS.gene23588:CDS |
| TCATTGGATACTGAAATGCA+GGG | 0.721142 | 8.4:+60932820 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAACTAAAAAATCAAAA+CGG | + | chr8.4:60931484-60931503 | None:intergenic | 10.0% |
| !!! | ATTCTAGTTCATATTAATAT+TGG | - | chr8.4:60932256-60932275 | MS.gene23588:intron | 15.0% |
| !!! | TTTTTAGTTTTTTCAAATAG+AGG | - | chr8.4:60931491-60931510 | MS.gene23588:intron | 15.0% |
| !!! | ATTAATATTGGTGTTATTGA+AGG | - | chr8.4:60932268-60932287 | MS.gene23588:intron | 20.0% |
| ! | AAAAGCTTAATTCGTTCAAT+GGG | + | chr8.4:60931284-60931303 | None:intergenic | 25.0% |
| ! | ATAAAATGACACAGGATATA+AGG | + | chr8.4:60932191-60932210 | None:intergenic | 25.0% |
| ! | GAATACATATCAACAAAGTT+AGG | + | chr8.4:60932240-60932259 | None:intergenic | 25.0% |
| CAAAAGCTTAATTCGTTCAA+TGG | + | chr8.4:60931285-60931304 | None:intergenic | 30.0% | |
| GTTAGTCGAACTAAAGAATT+TGG | + | chr8.4:60932218-60932237 | None:intergenic | 30.0% | |
| TTGGTCAAATAAAATGACAC+AGG | + | chr8.4:60932199-60932218 | None:intergenic | 30.0% | |
| TTTCAATTTCAAGAAGGACA+AGG | - | chr8.4:60931773-60931792 | MS.gene23588:intron | 30.0% | |
| TTTGTGGTTCAAAATCTTCT+AGG | - | chr8.4:60931713-60931732 | MS.gene23588:intron | 30.0% | |
| !! | TATGAAGTGTTGTCAAATAG+TGG | - | chr8.4:60931571-60931590 | MS.gene23588:intron | 30.0% |
| !! | TCATACTAAATAGAGTACTG+CGG | + | chr8.4:60931556-60931575 | None:intergenic | 30.0% |
| !! | TTTGTTGTTGACTTTCTCAT+GGG | - | chr8.4:60931221-60931240 | MS.gene23588:CDS | 30.0% |
| !! | TTTTAGTTAATGGCCATGTT+TGG | + | chr8.4:60932536-60932555 | None:intergenic | 30.0% |
| !!! | GCTGGCTTTATTTTAGTTAA+TGG | + | chr8.4:60932546-60932565 | None:intergenic | 30.0% |
| AAAATCAGAAGCAACTTTGC+TGG | + | chr8.4:60932564-60932583 | None:intergenic | 35.0% | |
| AACAAAGTTTCCTTTCTCAG+CGG | + | chr8.4:60931207-60931226 | None:intergenic | 35.0% | |
| AAGGGAGTAGACAAAGAAAA+GGG | + | chr8.4:60931859-60931878 | None:intergenic | 35.0% | |
| AAGTTACAGGTCATAATGCT+CGG | - | chr8.4:60932890-60932909 | MS.gene23588:CDS | 35.0% | |
| AATGATTGAACTCAACGACT+CGG | + | chr8.4:60932591-60932610 | None:intergenic | 35.0% | |
| AATTTCAAGAAGGACAAGGA+TGG | - | chr8.4:60931777-60931796 | MS.gene23588:intron | 35.0% | |
| ATAAAATGACACAGGGGATA+AGG | + | chr8.4:60932122-60932141 | None:intergenic | 35.0% | |
| ATCATTGGATACTGAAATGC+AGG | + | chr8.4:60931134-60931153 | None:intergenic | 35.0% | |
| CCACATTCTGAACAAGATTA+GGG | + | chr8.4:60931055-60931074 | None:intergenic | 35.0% | |
| CGATCTACAATTGACAACAA+TGG | - | chr8.4:60931636-60931655 | MS.gene23588:intron | 35.0% | |
| CTATCCTGCAATGATCAAAA+CGG | + | chr8.4:60932629-60932648 | None:intergenic | 35.0% | |
| GTTAGTCGAACTAAAGAACT+TGG | + | chr8.4:60932149-60932168 | None:intergenic | 35.0% | |
| TAACCTGAGTAGGGAAATAA+CGG | + | chr8.4:60931442-60931461 | None:intergenic | 35.0% | |
| TCATTGGATACTGAAATGCA+GGG | + | chr8.4:60931133-60931152 | None:intergenic | 35.0% | |
| TGGTCGAATAAAATGACACA+GGG | + | chr8.4:60932129-60932148 | None:intergenic | 35.0% | |
| TTCAGCTGTTTATCCAAACA+TGG | - | chr8.4:60932520-60932539 | MS.gene23588:CDS | 35.0% | |
| TTCTCCTAACTGTGTCAATT+GGG | + | chr8.4:60932712-60932731 | None:intergenic | 35.0% | |
| TTGGTCGAATAAAATGACAC+AGG | + | chr8.4:60932130-60932149 | None:intergenic | 35.0% | |
| ! | AAGCACTTGTGAGACTATTT+TGG | - | chr8.4:60932330-60932349 | MS.gene23588:intron | 35.0% |
| ! | AGAAGAATGATGATGACATC+TGG | - | chr8.4:60932728-60932747 | MS.gene23588:CDS | 35.0% |
| ! | GAGGCTTTTCAATTTCAAGA+AGG | - | chr8.4:60931767-60931786 | MS.gene23588:intron | 35.0% |
| ! | GATAGTTTCTTTGCTAGCTT+TGG | - | chr8.4:60932644-60932663 | MS.gene23588:CDS | 35.0% |
| ! | TAAGCTTTTGATCCAAAACC+AGG | - | chr8.4:60931295-60931314 | MS.gene23588:CDS | 35.0% |
| ! | TAATCATCTCATCCTGGTTT+TGG | + | chr8.4:60931310-60931329 | None:intergenic | 35.0% |
| ! | TGCATGTGATGCTAATTTTG+TGG | - | chr8.4:60931697-60931716 | MS.gene23588:intron | 35.0% |
| ! | TGTCTCTTCACAACTCTTTT+TGG | - | chr8.4:60931669-60931688 | MS.gene23588:intron | 35.0% |
| !! | ATTTCCGTTTTGATCATTGC+AGG | - | chr8.4:60932622-60932641 | MS.gene23588:CDS | 35.0% |
| !! | CTTGTTTTCACAAGCTATCA+TGG | + | chr8.4:60932411-60932430 | None:intergenic | 35.0% |
| !! | CTTTGTTGTTGACTTTCTCA+TGG | - | chr8.4:60931220-60931239 | MS.gene23588:CDS | 35.0% |
| !! | GAAATAACGGATGACATTTG+CGG | + | chr8.4:60931429-60931448 | None:intergenic | 35.0% |
| !! | TGACTGTTTTAAGCGAACAA+CGG | - | chr8.4:60931367-60931386 | MS.gene23588:intron | 35.0% |
| ACAAAGTTTCCTTTCTCAGC+GGG | + | chr8.4:60931206-60931225 | None:intergenic | 40.0% | |
| ACAAGGATGGTTACTGGAAA+TGG | - | chr8.4:60931790-60931809 | MS.gene23588:intron | 40.0% | |
| AGAACTCAACTAACCTGAGT+AGG | + | chr8.4:60931452-60931471 | None:intergenic | 40.0% | |
| AGATGTTGAAACCACGGTAA+AGG | + | chr8.4:60932004-60932023 | None:intergenic | 40.0% | |
| ATAATGCTCGGCAAGAAGTA+CGG | - | chr8.4:60932902-60932921 | MS.gene23588:CDS | 40.0% | |
| ATGTACCAAAGGAGGTCATT+TGG | - | chr8.4:60931095-60931114 | MS.gene23588:CDS | 40.0% | |
| CAACAAATCCTCAAGAACGA+GGG | - | chr8.4:60932788-60932807 | MS.gene23588:CDS | 40.0% | |
| CAAGGGAGTAGACAAAGAAA+AGG | + | chr8.4:60931860-60931879 | None:intergenic | 40.0% | |
| CACAAGAGATGTTGAAACCA+CGG | + | chr8.4:60932010-60932029 | None:intergenic | 40.0% | |
| CAGGATGAGATGATTAAAGC+TGG | - | chr8.4:60931314-60931333 | MS.gene23588:intron | 40.0% | |
| CATTCAAGGACTACTTCAAG+AGG | - | chr8.4:60931748-60931767 | MS.gene23588:intron | 40.0% | |
| CCCTAATCTTGTTCAGAATG+TGG | - | chr8.4:60931052-60931071 | MS.gene23588:CDS | 40.0% | |
| CCTTTGGTACATAGAAAGAC+CGG | + | chr8.4:60931087-60931106 | None:intergenic | 40.0% | |
| CTTACCCAATTGACACAGTT+AGG | - | chr8.4:60932705-60932724 | MS.gene23588:CDS | 40.0% | |
| CTTCTCCTAACTGTGTCAAT+TGG | + | chr8.4:60932713-60932732 | None:intergenic | 40.0% | |
| GAACTCAACTAACCTGAGTA+GGG | + | chr8.4:60931451-60931470 | None:intergenic | 40.0% | |
| GCCACATTCTGAACAAGATT+AGG | + | chr8.4:60931056-60931075 | None:intergenic | 40.0% | |
| GGTCGAATAAAATGACACAG+GGG | + | chr8.4:60932128-60932147 | None:intergenic | 40.0% | |
| GGTTTCAACATCTCTTGTGT+CGG | - | chr8.4:60932011-60932030 | MS.gene23588:CDS | 40.0% | |
| GTCTTTCTATGTACCAAAGG+AGG | - | chr8.4:60931087-60931106 | MS.gene23588:CDS | 40.0% | |
| TAGGGAGACAATACCTTCAT+CGG | + | chr8.4:60931393-60931412 | None:intergenic | 40.0% | |
| TGATGTCTACAAGAAGACAC+TGG | - | chr8.4:60931959-60931978 | MS.gene23588:CDS | 40.0% | |
| TGTACCAAAGGAGGTCATTT+GGG | - | chr8.4:60931096-60931115 | MS.gene23588:CDS | 40.0% | |
| ! | CAGCTTTAATCATCTCATCC+TGG | + | chr8.4:60931316-60931335 | None:intergenic | 40.0% |
| ! | CCTTTGCATCATTTGCTAGA+CGG | + | chr8.4:60931896-60931915 | None:intergenic | 40.0% |
| ! | CTTTGCATCATTTGCTAGAC+GGG | + | chr8.4:60931895-60931914 | None:intergenic | 40.0% |
| ! | GGTGCTAAGTCCTTGTTTAA+GGG | - | chr8.4:60932809-60932828 | MS.gene23588:CDS | 40.0% |
| !! | ATGAAGGTATTGTCTCCCTA+TGG | - | chr8.4:60931393-60931412 | MS.gene23588:intron | 40.0% |
| !! | GAAATGGTTTGCTGGAAACT+TGG | - | chr8.4:60931806-60931825 | MS.gene23588:intron | 40.0% |
| !! | GAAGTGTTGTCAAATAGTGG+CGG | - | chr8.4:60931574-60931593 | MS.gene23588:intron | 40.0% |
| !! | GATTTGTTGGAATGCATCGA+AGG | + | chr8.4:60932777-60932796 | None:intergenic | 40.0% |
| !! | GGCTTTGAACTTTGCATTCA+AGG | - | chr8.4:60931734-60931753 | MS.gene23588:intron | 40.0% |
| !! | TTCTTTGCTAGCTTTGGTCT+TGG | - | chr8.4:60932650-60932669 | MS.gene23588:CDS | 40.0% |
| AACTCCCAAATGACCTCCTT+TGG | + | chr8.4:60931103-60931122 | None:intergenic | 45.0% | |
| AAGAAGACACTGGCAACTGA+TGG | - | chr8.4:60931969-60931988 | MS.gene23588:CDS | 45.0% | |
| AGAAGGACAAGGATGGTTAC+TGG | - | chr8.4:60931784-60931803 | MS.gene23588:intron | 45.0% | |
| AGACTTTCTGAGCCCTACAA+GGG | - | chr8.4:60931338-60931357 | MS.gene23588:intron | 45.0% | |
| AGAGATCCAGTAAGGAGAAC+TGG | + | chr8.4:60932086-60932105 | None:intergenic | 45.0% | |
| CCAACAAATCCTCAAGAACG+AGG | - | chr8.4:60932787-60932806 | MS.gene23588:CDS | 45.0% | |
| CCGGTCTTTCTATGTACCAA+AGG | - | chr8.4:60931084-60931103 | MS.gene23588:CDS | 45.0% | |
| CCGTCTAGCAAATGATGCAA+AGG | - | chr8.4:60931893-60931912 | MS.gene23588:CDS | 45.0% | |
| CCTCGTTCTTGAGGATTTGT+TGG | + | chr8.4:60932790-60932809 | None:intergenic | 45.0% | |
| GATGCAAAGGCTGCAAAGAA+AGG | - | chr8.4:60931906-60931925 | MS.gene23588:CDS | 45.0% | |
| GTCGGAATCATTGTGTATCG+TGG | - | chr8.4:60932029-60932048 | MS.gene23588:CDS | 45.0% | |
| GTGTATCGTGGTCTCTACTT+TGG | - | chr8.4:60932041-60932060 | MS.gene23588:CDS | 45.0% | |
| TAGACTTTCTGAGCCCTACA+AGG | - | chr8.4:60931337-60931356 | MS.gene23588:intron | 45.0% | |
| TGGATACTGAAATGCAGGGT+TGG | + | chr8.4:60931129-60931148 | None:intergenic | 45.0% | |
| TTGAAGCCAGTTCTCCTTAC+TGG | - | chr8.4:60932077-60932096 | MS.gene23588:CDS | 45.0% | |
| ! | AAGTCCTTGTTTAAGGGAGC+TGG | - | chr8.4:60932815-60932834 | MS.gene23588:CDS | 45.0% |
| ! | AGTAAGGAGAACTGGCTTCA+AGG | + | chr8.4:60932078-60932097 | None:intergenic | 45.0% |
| ! | CATCCGTTATTTCCCTACTC+AGG | - | chr8.4:60931436-60931455 | MS.gene23588:intron | 45.0% |
| ! | GGGTGCTAAGTCCTTGTTTA+AGG | - | chr8.4:60932808-60932827 | MS.gene23588:CDS | 45.0% |
| ! | GGTTACTGGAAATGGTTTGC+TGG | - | chr8.4:60931798-60931817 | MS.gene23588:intron | 45.0% |
| !! | GTTGTTGACTTTCTCATGGG+TGG | - | chr8.4:60931224-60931243 | MS.gene23588:CDS | 45.0% |
| !! | TTGCTAGCTTTGGTCTTGGA+TGG | - | chr8.4:60932654-60932673 | MS.gene23588:CDS | 45.0% |
| ACGGGTACGAGCATAGTCAA+GGG | + | chr8.4:60931877-60931896 | None:intergenic | 50.0% | |
| ACTTAGCACCCTCGTTCTTG+AGG | + | chr8.4:60932799-60932818 | None:intergenic | 50.0% | |
| AGCACCAGCTCCCTTAAACA+AGG | + | chr8.4:60932822-60932841 | None:intergenic | 50.0% | |
| CGGGAGCTGCAACAAAGATA+GGG | + | chr8.4:60931187-60931206 | None:intergenic | 50.0% | |
| CTGGCAACTGATGGTATTGC+TGG | - | chr8.4:60931978-60931997 | MS.gene23588:CDS | 50.0% | |
| CTTGGATGGCTCATCACCAA+TGG | - | chr8.4:60932668-60932687 | MS.gene23588:CDS | 50.0% | |
| GAACCTGCAGAGATCCAGTA+AGG | + | chr8.4:60932094-60932113 | None:intergenic | 50.0% | |
| GCAGGAGGAAGACAATTCGA+TGG | - | chr8.4:60931930-60931949 | MS.gene23588:CDS | 50.0% | |
| GCGTTACATGCTGGCATCAT+TGG | + | chr8.4:60931149-60931168 | None:intergenic | 50.0% | |
| GGGAGCTGCAACAAAGATAG+GGG | + | chr8.4:60931186-60931205 | None:intergenic | 50.0% | |
| GGTACATAGAAAGACCGGTC+TGG | + | chr8.4:60931082-60931101 | None:intergenic | 50.0% | |
| GGTATTGTCTCCCTATGGAG+AGG | - | chr8.4:60931398-60931417 | MS.gene23588:intron | 50.0% | |
| GTTGTTGCAGCGTTACATGC+TGG | + | chr8.4:60931158-60931177 | None:intergenic | 50.0% | |
| TCTCCTTACTGGATCTCTGC+AGG | - | chr8.4:60932088-60932107 | MS.gene23588:CDS | 50.0% | |
| TCTGAGCCCTACAAGGGAAT+CGG | - | chr8.4:60931344-60931363 | MS.gene23588:intron | 50.0% | |
| TGTCAAATAGTGGCGGCACT+GGG | - | chr8.4:60931581-60931600 | MS.gene23588:intron | 50.0% | |
| TTGTCAAATAGTGGCGGCAC+TGG | - | chr8.4:60931580-60931599 | MS.gene23588:intron | 50.0% | |
| TTTGCTGGAAACTTGGCCTC+AGG | - | chr8.4:60931813-60931832 | MS.gene23588:intron | 50.0% | |
| ! | AAGGCTGCAAAGAAAGGTGC+AGG | - | chr8.4:60931912-60931931 | MS.gene23588:CDS | 50.0% |
| ! | CGCTGGTTACGACAAGTTAC+AGG | - | chr8.4:60932877-60932896 | MS.gene23588:CDS | 50.0% |
| !! | ACAGTCACCGATTCCCTTGT+AGG | + | chr8.4:60931354-60931373 | None:intergenic | 50.0% |
| !! | CAGTCACCGATTCCCTTGTA+GGG | + | chr8.4:60931353-60931372 | None:intergenic | 50.0% |
| !! | TGCGGTGTTACCTCTCCATA+GGG | + | chr8.4:60931411-60931430 | None:intergenic | 50.0% |
| !! | TTGCGGTGTTACCTCTCCAT+AGG | + | chr8.4:60931412-60931431 | None:intergenic | 50.0% |
| AAGCGAACAACGGCCGATGA+AGG | - | chr8.4:60931377-60931396 | MS.gene23588:intron | 55.0% | |
| AGATGCTAGCCCTGCACCAT+TGG | + | chr8.4:60932687-60932706 | None:intergenic | 55.0% | |
| GACGGGTACGAGCATAGTCA+AGG | + | chr8.4:60931878-60931897 | None:intergenic | 55.0% | |
| GCGGGAGCTGCAACAAAGAT+AGG | + | chr8.4:60931188-60931207 | None:intergenic | 55.0% | |
| GGCTCATCACCAATGGTGCA+GGG | - | chr8.4:60932675-60932694 | MS.gene23588:CDS | 55.0% | |
| TCGTTCAATGGGAGCTGCAG+CGG | + | chr8.4:60931273-60931292 | None:intergenic | 55.0% | |
| TGGCTCATCACCAATGGTGC+AGG | - | chr8.4:60932674-60932693 | MS.gene23588:CDS | 55.0% | |
| ! | CTCGGCAAGAAGTACGGATC+CGG | - | chr8.4:60932908-60932927 | MS.gene23588:CDS | 55.0% |
| ! | GCTGCAAAGAAAGGTGCAGG+AGG | - | chr8.4:60931915-60931934 | MS.gene23588:CDS | 55.0% |
| !! | GGTATTGCTGGCCTTTACCG+TGG | - | chr8.4:60931990-60932009 | MS.gene23588:CDS | 55.0% |
| CAGAATGTGGCACGCCAGAC+CGG | - | chr8.4:60931065-60931084 | MS.gene23588:CDS | 60.0% | |
| GCTGGAAACTTGGCCTCAGG+AGG | - | chr8.4:60931816-60931835 | MS.gene23588:intron | 60.0% | |
| GTTGCAGCTCCCGCTGAGAA+AGG | - | chr8.4:60931194-60931213 | MS.gene23588:CDS | 60.0% | |
| ! | GGCAAGAAGTACGGATCCGG+TGG | - | chr8.4:60932911-60932930 | MS.gene23588:CDS | 60.0% |
| AACATCCTCCGTGCCGTCGC+TGG | - | chr8.4:60932842-60932861 | MS.gene23588:CDS | 65.0% | |
| AGCACCAGCAGCACCTCCTG+AGG | + | chr8.4:60931832-60931851 | None:intergenic | 65.0% | |
| GAGCACACCAGCACCAGCGA+CGG | + | chr8.4:60932858-60932877 | None:intergenic | 65.0% | |
| !! | TTGGCCTCAGGAGGTGCTGC+TGG | - | chr8.4:60931825-60931844 | MS.gene23588:intron | 65.0% |
| CACCAGCACCAGCGACGGCA+CGG | + | chr8.4:60932853-60932872 | None:intergenic | 70.0% | |
| !! | GCTGGTGCTGGTGTGCTCGC+TGG | - | chr8.4:60932860-60932879 | MS.gene23588:CDS | 70.0% |
| CAGCACCAGCGACGGCACGG+AGG | + | chr8.4:60932850-60932869 | None:intergenic | 75.0% | |
| CTCCGTGCCGTCGCTGGTGC+TGG | - | chr8.4:60932848-60932867 | MS.gene23588:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 60931032 | 60932940 | 60931032 | ID=MS.gene23588 |
| chr8.4 | mRNA | 60931032 | 60932940 | 60931032 | ID=MS.gene23588.t1;Parent=MS.gene23588 |
| chr8.4 | exon | 60932515 | 60932940 | 60932515 | ID=MS.gene23588.t1.exon1;Parent=MS.gene23588.t1 |
| chr8.4 | CDS | 60932515 | 60932940 | 60932515 | ID=cds.MS.gene23588.t1;Parent=MS.gene23588.t1 |
| chr8.4 | exon | 60931863 | 60932237 | 60931863 | ID=MS.gene23588.t1.exon2;Parent=MS.gene23588.t1 |
| chr8.4 | CDS | 60931863 | 60932237 | 60931863 | ID=cds.MS.gene23588.t1;Parent=MS.gene23588.t1 |
| chr8.4 | exon | 60931032 | 60931328 | 60931032 | ID=MS.gene23588.t1.exon3;Parent=MS.gene23588.t1 |
| chr8.4 | CDS | 60931032 | 60931328 | 60931032 | ID=cds.MS.gene23588.t1;Parent=MS.gene23588.t1 |
| Gene Sequence |
| Protein sequence |
