Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene82276.t1 | XP_013459165.1 | 98.7 | 389 | 5 | 0 | 1 | 389 | 1 | 389 | 6.20E-204 | 719.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene82276.t1 | O22342 | 78.8 | 391 | 75 | 4 | 2 | 389 | 1 | 386 | 2.8e-168 | 592.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene82276.t1 | A0A072UTP5 | 98.7 | 389 | 5 | 0 | 1 | 389 | 5 | 393 | 4.5e-204 | 719.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene065946 | MS.gene82276 | PPI |
MS.gene60471 | MS.gene82276 | PPI |
MS.gene32809 | MS.gene82276 | PPI |
MS.gene82276 | MS.gene045584 | PPI |
MS.gene057845 | MS.gene82276 | PPI |
MS.gene037500 | MS.gene82276 | PPI |
MS.gene93756 | MS.gene82276 | PPI |
MS.gene037505 | MS.gene82276 | PPI |
MS.gene065947 | MS.gene82276 | PPI |
MS.gene79071 | MS.gene82276 | PPI |
MS.gene37419 | MS.gene82276 | PPI |
MS.gene82276 | MS.gene031696 | PPI |
MS.gene77337 | MS.gene82276 | PPI |
MS.gene040118 | MS.gene82276 | PPI |
MS.gene94558 | MS.gene82276 | PPI |
MS.gene006614 | MS.gene82276 | PPI |
MS.gene82276 | MS.gene016690 | PPI |
MS.gene015010 | MS.gene82276 | PPI |
MS.gene51070 | MS.gene82276 | PPI |
MS.gene82276 | MS.gene23588 | PPI |
MS.gene016690 | MS.gene82276 | PPI |
MS.gene84203 | MS.gene82276 | PPI |
MS.gene82276 | MS.gene46786 | PPI |
MS.gene78433 | MS.gene82276 | PPI |
MS.gene046998 | MS.gene82276 | PPI |
MS.gene23588 | MS.gene82276 | PPI |
MS.gene012807 | MS.gene82276 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene82276.t1 | MTR_3g028590 | 98.715 | 389 | 5 | 0 | 1 | 389 | 5 | 393 | 0.0 | 789 |
MS.gene82276.t1 | MTR_3g028590 | 98.715 | 389 | 5 | 0 | 1 | 389 | 1 | 389 | 0.0 | 788 |
MS.gene82276.t1 | MTR_8g036880 | 81.538 | 390 | 46 | 4 | 1 | 389 | 35 | 399 | 0.0 | 608 |
MS.gene82276.t1 | MTR_4g078545 | 74.872 | 390 | 76 | 3 | 1 | 388 | 1 | 370 | 0.0 | 546 |
MS.gene82276.t1 | MTR_2g098070 | 74.444 | 360 | 83 | 4 | 35 | 389 | 7 | 362 | 6.53e-178 | 499 |
MS.gene82276.t1 | MTR_8g107270 | 59.649 | 285 | 115 | 0 | 92 | 376 | 17 | 301 | 3.32e-128 | 371 |
MS.gene82276.t1 | MTR_3g104500 | 39.189 | 296 | 169 | 6 | 87 | 376 | 28 | 318 | 2.54e-67 | 216 |
MS.gene82276.t1 | MTR_3g104600 | 31.715 | 309 | 177 | 9 | 89 | 376 | 31 | 326 | 1.24e-35 | 134 |
MS.gene82276.t1 | MTR_6g091800 | 28.763 | 299 | 192 | 6 | 89 | 376 | 15 | 303 | 8.72e-33 | 125 |
MS.gene82276.t1 | MTR_6g091800 | 27.245 | 323 | 190 | 7 | 89 | 376 | 15 | 327 | 7.27e-29 | 115 |
MS.gene82276.t1 | MTR_6g091800 | 28.839 | 267 | 164 | 6 | 89 | 344 | 15 | 266 | 1.34e-28 | 113 |
MS.gene82276.t1 | MTR_5g009500 | 29.022 | 317 | 172 | 10 | 81 | 363 | 24 | 321 | 2.82e-28 | 114 |
MS.gene82276.t1 | MTR_6g091800 | 30.204 | 245 | 154 | 4 | 89 | 326 | 15 | 249 | 9.90e-28 | 110 |
MS.gene82276.t1 | MTR_8g027975 | 29.195 | 298 | 174 | 9 | 92 | 363 | 50 | 336 | 1.96e-27 | 111 |
MS.gene82276.t1 | MTR_8g027975 | 26.108 | 203 | 131 | 5 | 96 | 285 | 157 | 353 | 8.41e-11 | 63.2 |
MS.gene82276.t1 | MTR_6g091800 | 27.273 | 308 | 180 | 6 | 89 | 362 | 15 | 312 | 2.75e-27 | 110 |
MS.gene82276.t1 | MTR_7g064980 | 28.904 | 301 | 195 | 8 | 90 | 379 | 22 | 314 | 5.72e-27 | 109 |
MS.gene82276.t1 | MTR_1g012030 | 30.314 | 287 | 162 | 11 | 93 | 368 | 139 | 398 | 1.83e-26 | 110 |
MS.gene82276.t1 | MTR_1g012030 | 27.143 | 210 | 132 | 6 | 81 | 286 | 219 | 411 | 4.48e-14 | 73.6 |
MS.gene82276.t1 | MTR_3g107510 | 28.881 | 277 | 173 | 8 | 96 | 368 | 125 | 381 | 6.91e-26 | 108 |
MS.gene82276.t1 | MTR_3g107510 | 28.095 | 210 | 130 | 6 | 81 | 286 | 202 | 394 | 1.60e-15 | 77.8 |
MS.gene82276.t1 | MTR_8g096050 | 29.617 | 287 | 168 | 9 | 93 | 368 | 227 | 490 | 1.72e-25 | 108 |
MS.gene82276.t1 | MTR_7g084400 | 30.345 | 290 | 159 | 8 | 93 | 368 | 213 | 473 | 4.81e-25 | 106 |
MS.gene82276.t1 | MTR_7g068340 | 29.682 | 283 | 168 | 8 | 104 | 379 | 98 | 356 | 6.47e-25 | 105 |
MS.gene82276.t1 | MTR_6g091800 | 27.148 | 291 | 162 | 7 | 89 | 344 | 15 | 290 | 9.47e-25 | 103 |
MS.gene82276.t1 | MTR_4g119770 | 26.444 | 329 | 195 | 8 | 83 | 375 | 4 | 321 | 1.54e-24 | 103 |
MS.gene82276.t1 | MTR_6g091800 | 28.253 | 269 | 152 | 5 | 89 | 326 | 15 | 273 | 5.74e-24 | 100 |
MS.gene82276.t1 | MTR_4g114320 | 27.465 | 284 | 174 | 7 | 93 | 368 | 123 | 382 | 7.42e-24 | 102 |
MS.gene82276.t1 | MTR_4g114320 | 27.751 | 209 | 127 | 6 | 83 | 286 | 206 | 395 | 2.74e-14 | 74.3 |
MS.gene82276.t1 | MTR_5g081150 | 26.144 | 306 | 209 | 7 | 83 | 379 | 24 | 321 | 1.00e-23 | 100 |
MS.gene82276.t1 | MTR_3g098460 | 28.383 | 303 | 180 | 11 | 77 | 368 | 192 | 468 | 2.91e-23 | 101 |
MS.gene82276.t1 | MTR_2g436930 | 27.673 | 318 | 185 | 9 | 90 | 373 | 12 | 318 | 6.98e-23 | 98.6 |
MS.gene82276.t1 | MTR_6g034145 | 28.340 | 247 | 163 | 5 | 141 | 376 | 6 | 249 | 9.41e-23 | 96.7 |
MS.gene82276.t1 | MTR_4g016730 | 29.480 | 346 | 202 | 13 | 40 | 379 | 46 | 355 | 1.05e-22 | 99.0 |
MS.gene82276.t1 | MTR_6g091800 | 31.148 | 183 | 110 | 3 | 89 | 264 | 15 | 188 | 1.22e-22 | 94.7 |
MS.gene82276.t1 | MTR_6g092210 | 28.216 | 241 | 165 | 5 | 141 | 376 | 6 | 243 | 3.66e-22 | 95.1 |
MS.gene82276.t1 | MTR_4g119770 | 26.592 | 267 | 160 | 6 | 83 | 324 | 4 | 259 | 1.62e-19 | 87.8 |
MS.gene82276.t1 | MTR_6g091800 | 28.502 | 207 | 108 | 4 | 89 | 264 | 15 | 212 | 9.52e-19 | 84.3 |
MS.gene82276.t1 | MTR_3g074490 | 27.946 | 297 | 166 | 12 | 96 | 368 | 119 | 391 | 1.37e-17 | 84.3 |
MS.gene82276.t1 | MTR_4g005330 | 24.000 | 300 | 186 | 7 | 90 | 368 | 63 | 341 | 2.68e-17 | 82.8 |
MS.gene82276.t1 | MTR_1g090330 | 22.180 | 266 | 195 | 4 | 93 | 354 | 14 | 271 | 6.38e-17 | 80.9 |
MS.gene82276.t1 | MTR_1g090330 | 28.571 | 168 | 112 | 4 | 94 | 260 | 112 | 272 | 5.72e-13 | 69.3 |
MS.gene82276.t1 | MTR_2g102010 | 25.874 | 286 | 195 | 6 | 92 | 373 | 16 | 288 | 1.00e-16 | 80.5 |
MS.gene82276.t1 | MTR_4g005330 | 23.810 | 294 | 182 | 7 | 96 | 368 | 3 | 275 | 3.48e-16 | 79.0 |
MS.gene82276.t1 | MTR_3g100570 | 26.174 | 298 | 179 | 10 | 93 | 361 | 6 | 291 | 4.69e-16 | 78.6 |
MS.gene82276.t1 | MTR_4g012850 | 26.749 | 243 | 164 | 5 | 138 | 373 | 51 | 286 | 6.51e-16 | 78.2 |
MS.gene82276.t1 | MTR_5g030530 | 26.502 | 283 | 187 | 9 | 92 | 363 | 7 | 279 | 9.56e-16 | 77.4 |
MS.gene82276.t1 | MTR_6g091910 | 27.363 | 201 | 135 | 5 | 89 | 285 | 15 | 208 | 1.12e-15 | 75.9 |
MS.gene82276.t1 | MTR_8g066975 | 26.316 | 285 | 185 | 9 | 92 | 363 | 7 | 279 | 2.20e-15 | 76.6 |
MS.gene82276.t1 | MTR_7g084400 | 31.122 | 196 | 109 | 5 | 93 | 282 | 207 | 382 | 3.38e-15 | 77.0 |
MS.gene82276.t1 | MTR_7g066690 | 25.000 | 272 | 187 | 7 | 89 | 354 | 13 | 273 | 2.31e-14 | 73.6 |
MS.gene82276.t1 | MTR_5g081150 | 28.966 | 145 | 97 | 2 | 83 | 223 | 24 | 166 | 7.87e-14 | 71.2 |
MS.gene82276.t1 | MTR_5g081150 | 28.966 | 145 | 97 | 2 | 83 | 223 | 24 | 166 | 1.01e-13 | 70.9 |
MS.gene82276.t1 | MTR_4g018750 | 25.461 | 271 | 181 | 9 | 99 | 361 | 21 | 278 | 1.35e-13 | 71.2 |
MS.gene82276.t1 | MTR_2g436930 | 29.231 | 195 | 111 | 5 | 200 | 373 | 40 | 228 | 6.50e-13 | 68.2 |
MS.gene82276.t1 | MTR_8g090210 | 23.649 | 296 | 180 | 10 | 96 | 368 | 113 | 385 | 1.27e-12 | 69.3 |
MS.gene82276.t1 | MTR_4g018750 | 25.000 | 256 | 171 | 9 | 99 | 346 | 21 | 263 | 1.45e-11 | 65.1 |
MS.gene82276.t1 | MTR_4g057850 | 24.742 | 194 | 130 | 4 | 94 | 281 | 116 | 299 | 3.04e-11 | 64.3 |
MS.gene82276.t1 | MTR_5g032420 | 21.070 | 299 | 202 | 6 | 93 | 361 | 6 | 300 | 5.55e-11 | 63.5 |
MS.gene82276.t1 | MTR_1g088995 | 24.444 | 270 | 177 | 7 | 92 | 354 | 32 | 281 | 7.92e-11 | 63.2 |
MS.gene82276.t1 | MTR_7g109135 | 22.887 | 284 | 194 | 9 | 96 | 368 | 25 | 294 | 9.34e-11 | 62.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene82276.t1 | AT5G13490 | 81.170 | 393 | 62 | 5 | 1 | 389 | 1 | 385 | 0.0 | 608 |
MS.gene82276.t1 | AT5G13490 | 81.170 | 393 | 62 | 5 | 1 | 389 | 1 | 385 | 0.0 | 608 |
MS.gene82276.t1 | AT3G08580 | 82.188 | 393 | 54 | 6 | 1 | 389 | 1 | 381 | 0.0 | 590 |
MS.gene82276.t1 | AT3G08580 | 82.188 | 393 | 54 | 6 | 1 | 389 | 1 | 381 | 0.0 | 590 |
MS.gene82276.t1 | AT4G28390 | 74.936 | 391 | 81 | 4 | 2 | 388 | 1 | 378 | 0.0 | 548 |
MS.gene82276.t1 | AT4G28390 | 74.936 | 391 | 81 | 4 | 2 | 388 | 1 | 378 | 0.0 | 548 |
MS.gene82276.t1 | AT5G17400 | 58.804 | 301 | 124 | 0 | 80 | 380 | 1 | 301 | 6.01e-130 | 375 |
MS.gene82276.t1 | AT5G56450 | 38.835 | 309 | 170 | 7 | 80 | 376 | 21 | 322 | 5.08e-66 | 213 |
MS.gene82276.t1 | AT3G55640 | 28.037 | 321 | 213 | 7 | 58 | 368 | 1 | 313 | 2.35e-33 | 127 |
MS.gene82276.t1 | AT3G55640 | 28.037 | 321 | 213 | 7 | 58 | 368 | 1 | 313 | 2.35e-33 | 127 |
MS.gene82276.t1 | AT1G14560 | 30.249 | 281 | 170 | 6 | 104 | 368 | 38 | 308 | 8.30e-33 | 125 |
MS.gene82276.t1 | AT2G37890 | 30.640 | 297 | 189 | 7 | 92 | 379 | 44 | 332 | 9.33e-33 | 125 |
MS.gene82276.t1 | AT1G14560 | 30.545 | 275 | 165 | 6 | 104 | 362 | 38 | 302 | 6.20e-32 | 123 |
MS.gene82276.t1 | AT4G26180 | 31.270 | 307 | 177 | 9 | 89 | 377 | 17 | 307 | 9.72e-32 | 123 |
MS.gene82276.t1 | AT4G26180 | 31.959 | 291 | 165 | 8 | 89 | 362 | 17 | 291 | 9.47e-31 | 119 |
MS.gene82276.t1 | AT3G53940 | 29.831 | 295 | 187 | 8 | 85 | 368 | 63 | 348 | 3.21e-29 | 117 |
MS.gene82276.t1 | AT3G53940 | 24.365 | 197 | 137 | 3 | 91 | 287 | 178 | 362 | 1.20e-11 | 65.9 |
MS.gene82276.t1 | AT3G51870 | 32.624 | 282 | 161 | 9 | 104 | 379 | 102 | 360 | 1.48e-28 | 115 |
MS.gene82276.t1 | AT4G01100 | 27.597 | 308 | 168 | 9 | 96 | 368 | 45 | 332 | 1.29e-26 | 109 |
MS.gene82276.t1 | AT5G01500 | 30.824 | 279 | 170 | 9 | 104 | 379 | 130 | 388 | 1.81e-26 | 110 |
MS.gene82276.t1 | AT4G32400 | 29.893 | 281 | 171 | 9 | 93 | 368 | 114 | 373 | 1.29e-25 | 107 |
MS.gene82276.t1 | AT4G01100 | 27.796 | 313 | 175 | 9 | 96 | 368 | 45 | 346 | 6.75e-25 | 104 |
MS.gene82276.t1 | AT4G01100 | 26.821 | 302 | 166 | 9 | 102 | 368 | 1 | 282 | 2.20e-24 | 102 |
MS.gene82276.t1 | AT5G51050 | 29.825 | 285 | 167 | 7 | 93 | 368 | 223 | 483 | 1.21e-23 | 102 |
MS.gene82276.t1 | AT3G21390 | 26.625 | 323 | 198 | 7 | 83 | 373 | 9 | 324 | 2.50e-23 | 100 |
MS.gene82276.t1 | AT3G21390 | 26.625 | 323 | 198 | 7 | 83 | 373 | 31 | 346 | 3.18e-23 | 100 |
MS.gene82276.t1 | AT5G61810 | 27.703 | 296 | 183 | 8 | 77 | 368 | 52 | 320 | 3.43e-23 | 99.8 |
MS.gene82276.t1 | AT5G61810 | 27.703 | 296 | 183 | 8 | 77 | 368 | 195 | 463 | 2.69e-22 | 98.6 |
MS.gene82276.t1 | AT3G55640 | 27.481 | 262 | 171 | 6 | 58 | 312 | 1 | 250 | 2.93e-22 | 95.5 |
MS.gene82276.t1 | AT3G55640 | 27.481 | 262 | 171 | 6 | 58 | 312 | 1 | 250 | 2.93e-22 | 95.5 |
MS.gene82276.t1 | AT1G14560 | 31.383 | 188 | 112 | 4 | 197 | 368 | 24 | 210 | 6.45e-22 | 94.0 |
MS.gene82276.t1 | AT3G20240 | 24.917 | 301 | 190 | 6 | 86 | 368 | 45 | 327 | 8.74e-22 | 95.9 |
MS.gene82276.t1 | AT5G48970 | 27.160 | 324 | 196 | 10 | 83 | 373 | 12 | 328 | 1.59e-21 | 94.7 |
MS.gene82276.t1 | AT5G07320 | 27.778 | 270 | 169 | 7 | 102 | 368 | 218 | 464 | 6.51e-21 | 94.7 |
MS.gene82276.t1 | AT3G53940 | 29.167 | 216 | 137 | 5 | 85 | 293 | 63 | 269 | 8.93e-19 | 86.3 |
MS.gene82276.t1 | AT5G64970 | 27.119 | 295 | 171 | 11 | 96 | 368 | 138 | 410 | 3.81e-15 | 77.0 |
MS.gene82276.t1 | AT5G48970 | 26.641 | 259 | 157 | 8 | 141 | 373 | 6 | 257 | 5.54e-15 | 75.1 |
MS.gene82276.t1 | AT1G14140 | 23.507 | 268 | 190 | 6 | 93 | 354 | 16 | 274 | 1.23e-14 | 74.3 |
MS.gene82276.t1 | AT1G14140 | 28.061 | 196 | 127 | 5 | 198 | 383 | 18 | 209 | 1.05e-11 | 65.9 |
MS.gene82276.t1 | AT5G64970 | 26.780 | 295 | 172 | 11 | 96 | 368 | 14 | 286 | 1.71e-14 | 73.9 |
MS.gene82276.t1 | AT5G64970 | 27.778 | 288 | 164 | 11 | 96 | 361 | 138 | 403 | 3.60e-14 | 73.9 |
MS.gene82276.t1 | AT5G46800 | 26.573 | 286 | 186 | 8 | 92 | 363 | 7 | 282 | 6.10e-14 | 72.4 |
MS.gene82276.t1 | AT5G46800 | 26.573 | 286 | 186 | 8 | 92 | 363 | 7 | 282 | 6.10e-14 | 72.4 |
MS.gene82276.t1 | AT5G46800 | 26.573 | 286 | 186 | 8 | 92 | 363 | 7 | 282 | 6.10e-14 | 72.4 |
MS.gene82276.t1 | AT5G58970 | 24.742 | 291 | 190 | 8 | 83 | 361 | 6 | 279 | 7.87e-14 | 72.0 |
MS.gene82276.t1 | AT2G33820 | 23.404 | 282 | 201 | 5 | 89 | 362 | 14 | 288 | 3.58e-13 | 70.1 |
MS.gene82276.t1 | AT5G66380 | 27.317 | 205 | 125 | 6 | 191 | 383 | 5 | 197 | 1.12e-12 | 68.6 |
MS.gene82276.t1 | AT3G54110 | 23.134 | 268 | 189 | 8 | 93 | 354 | 15 | 271 | 1.34e-12 | 68.6 |
MS.gene82276.t1 | AT1G79900 | 25.726 | 241 | 156 | 6 | 140 | 373 | 53 | 277 | 8.85e-12 | 65.9 |
MS.gene82276.t1 | AT1G78180 | 24.415 | 299 | 174 | 8 | 96 | 368 | 131 | 403 | 9.76e-12 | 66.6 |
MS.gene82276.t1 | AT2G33820 | 22.759 | 290 | 201 | 6 | 89 | 362 | 14 | 296 | 8.00e-11 | 63.2 |
Find 124 sgRNAs with CRISPR-Local
Find 140 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCTGGTGCTGGTGTGCTTTC+TGG | 0.149238 | 3.4:+22524667 | MS.gene82276:CDS |
TGATCATCTCATCCTGGTTT+TGG | 0.179358 | 3.4:-22523708 | None:intergenic |
CGGGTCTTTCATCTGGATTT+AGG | 0.206368 | 3.4:+22523422 | MS.gene82276:CDS |
AATGGGAGCAGCAGCAGTTT+TGG | 0.270825 | 3.4:-22523665 | None:intergenic |
GGGTCTTTCATCTGGATTTA+GGG | 0.271738 | 3.4:+22523423 | MS.gene82276:CDS |
AACATCCTCCGTGCCGTTGC+TGG | 0.301686 | 3.4:+22524649 | MS.gene82276:CDS |
AGTTCCCATAGGAGAATCTT+TGG | 0.306546 | 3.4:-22523480 | None:intergenic |
TCTTCTCACTGGAAAATTGC+AGG | 0.310516 | 3.4:+22524299 | MS.gene82276:CDS |
CTTAGCTGCCTTAGAATCAT+TGG | 0.323339 | 3.4:-22524115 | None:intergenic |
CTTGCTACTGATGGAATTGC+TGG | 0.330650 | 3.4:+22524189 | MS.gene82276:CDS |
AGAAGGACAGGGATGGTTAC+TGG | 0.330831 | 3.4:+22523998 | MS.gene82276:CDS |
CCTCATTCTTGAGGATTTGT+TGG | 0.335787 | 3.4:-22524594 | None:intergenic |
CTCCGTGCCGTTGCTGGTGC+TGG | 0.343034 | 3.4:+22524655 | MS.gene82276:CDS |
TTCTGGTTATGACAAGTTGC+AGG | 0.364749 | 3.4:+22524684 | MS.gene82276:CDS |
CGTCGATCGGGTCTTTCATC+TGG | 0.364825 | 3.4:+22523415 | MS.gene82276:CDS |
ACAATCACCAATACCCTTGT+AGG | 0.369255 | 3.4:-22523752 | None:intergenic |
GTGACCTTCTCCATGATTGT+TGG | 0.389407 | 3.4:-22523379 | None:intergenic |
CAAAAGCTTAATACGTTCAA+TGG | 0.391915 | 3.4:-22523683 | None:intergenic |
TCGTCTTGCCAATGATTCTA+AGG | 0.397580 | 3.4:+22524107 | MS.gene82276:CDS |
ACAGGGATGGTTACTGGAAA+TGG | 0.399761 | 3.4:+22524004 | MS.gene82276:CDS |
GAAAGCAACCATGGTTGATC+AGG | 0.420030 | 3.4:+22523348 | None:intergenic |
CTTCTCCTAACAGTGTCAAT+GGG | 0.420342 | 3.4:-22524517 | None:intergenic |
TCCTCCAGATGCCAAGTTAC+CGG | 0.433978 | 3.4:-22524031 | None:intergenic |
TTTCGTTATTGACTTTCTCA+TGG | 0.438686 | 3.4:+22523621 | MS.gene82276:CDS |
CTTGTGTTCGGCAAGAAATA+CGG | 0.440747 | 3.4:+22524709 | MS.gene82276:CDS |
GACCCGATCGACGGTGGAGC+TGG | 0.442042 | 3.4:-22523405 | None:intergenic |
AAGTTGCAGGTTCTTGTGTT+CGG | 0.444616 | 3.4:+22524697 | MS.gene82276:CDS |
TTTGCCGGTAACTTGGCATC+TGG | 0.445959 | 3.4:+22524027 | MS.gene82276:CDS |
CTTGTACTTGACAGCTTCTC+CGG | 0.448393 | 3.4:-22524554 | None:intergenic |
GGCCAGCTCCACCGTCGATC+GGG | 0.448817 | 3.4:+22523403 | MS.gene82276:CDS |
AGTGAGAAGAACTGGTTTGA+GGG | 0.449368 | 3.4:-22524286 | None:intergenic |
GAGCCATCCAAGCGCAAAGC+TGG | 0.450450 | 3.4:-22524464 | None:intergenic |
CAGTGAGAAGAACTGGTTTG+AGG | 0.452118 | 3.4:-22524287 | None:intergenic |
GGTTACTGGAAATGGTTTGC+CGG | 0.452634 | 3.4:+22524012 | MS.gene82276:CDS |
TCTTCTCCTAACAGTGTCAA+TGG | 0.452687 | 3.4:-22524518 | None:intergenic |
GAAATGGTTTGCCGGTAACT+TGG | 0.453917 | 3.4:+22524020 | MS.gene82276:CDS |
TGAGAAAGTCAATAACGAAA+TGG | 0.456385 | 3.4:-22523618 | None:intergenic |
GTCTACCGTGGTCTGTACTT+TGG | 0.456565 | 3.4:+22524252 | MS.gene82276:CDS |
TCGCCAGCTTTGCGCTTGGA+TGG | 0.458299 | 3.4:+22524461 | MS.gene82276:CDS |
CTCAAACCAGTTCTTCTCAC+TGG | 0.459621 | 3.4:+22524288 | MS.gene82276:CDS |
TTGGCATCTGGAGGAGCAGC+TGG | 0.465831 | 3.4:+22524039 | MS.gene82276:CDS |
CACCAGCACCAGCAACGGCA+CGG | 0.468876 | 3.4:-22524657 | None:intergenic |
GTTCCCATAGGAGAATCTTT+GGG | 0.471265 | 3.4:-22523479 | None:intergenic |
CATACCCCATTGACACTGTT+AGG | 0.473018 | 3.4:+22524512 | MS.gene82276:CDS |
TGGCCAGCTCCACCGTCGAT+CGG | 0.474097 | 3.4:+22523402 | MS.gene82276:CDS |
GCTGGAGCAGCGACGAAGAC+AGG | 0.475793 | 3.4:-22523586 | None:intergenic |
TCTGGATTTAGGGGTTATGA+AGG | 0.477435 | 3.4:+22523433 | MS.gene82276:CDS |
ATCATTGGCAAGACGAGTAC+GGG | 0.477887 | 3.4:-22524100 | None:intergenic |
AGAAAATGGCTAACCTGAGT+AGG | 0.478242 | 3.4:-22523850 | None:intergenic |
ATGAGGGTATTGTTGCTCTC+TGG | 0.479479 | 3.4:+22523794 | MS.gene82276:CDS |
ATCAACAGTTGCCCTGCAAG+TGG | 0.483410 | 3.4:-22523536 | None:intergenic |
AAAAGCTTAATACGTTCAAT+GGG | 0.489695 | 3.4:-22523682 | None:intergenic |
TCTGAGCCCTACAAGGGTAT+TGG | 0.490496 | 3.4:+22523745 | MS.gene82276:CDS |
ATGTCCCAAAGATTCTCCTA+TGG | 0.492338 | 3.4:+22523475 | MS.gene82276:CDS |
GGTTTCAACATCTCCTGTGT+TGG | 0.492793 | 3.4:+22524222 | MS.gene82276:CDS |
TTCGTTATTGACTTTCTCAT+GGG | 0.493555 | 3.4:+22523622 | MS.gene82276:CDS |
CCAACAAATCCTCAAGAATG+AGG | 0.494163 | 3.4:+22524594 | MS.gene82276:CDS |
CAGGATGAGATGATCAAGTC+TGG | 0.496357 | 3.4:+22523715 | MS.gene82276:CDS |
AAGCACACCAGCACCAGCAA+CGG | 0.501311 | 3.4:-22524662 | None:intergenic |
GGGTGCTAAGTCATTGTTCA+AGG | 0.502290 | 3.4:+22524615 | MS.gene82276:CDS |
AATCATTGGCAAGACGAGTA+CGG | 0.503375 | 3.4:-22524101 | None:intergenic |
AAGAAGACTCTTGCTACTGA+TGG | 0.508472 | 3.4:+22524180 | MS.gene82276:CDS |
ACAATCATGGAGAAGGTCAC+TGG | 0.514525 | 3.4:+22523382 | MS.gene82276:CDS |
TTCGGCAAGAAATACGGATC+TGG | 0.519522 | 3.4:+22524715 | MS.gene82276:CDS |
CAGACTTGATCATCTCATCC+TGG | 0.520517 | 3.4:-22523714 | None:intergenic |
AAGTCATTGTTCAAGGGAGC+TGG | 0.521554 | 3.4:+22524622 | MS.gene82276:CDS |
GGTTAAGCAACCAACAATCA+TGG | 0.524656 | 3.4:+22523369 | MS.gene82276:CDS |
TGATGCTAGACCTGCACCAT+TGG | 0.527310 | 3.4:-22524491 | None:intergenic |
AGAAGAATGATGATGACATC+CGG | 0.527583 | 3.4:+22524535 | MS.gene82276:CDS |
CAACAGTTGCCCTGCAAGTG+GGG | 0.528651 | 3.4:-22523534 | None:intergenic |
TGGCTCATTACCAATGGTGC+AGG | 0.529441 | 3.4:+22524481 | MS.gene82276:CDS |
TATCCGTTATTTCCCTACTC+AGG | 0.534487 | 3.4:+22523837 | MS.gene82276:CDS |
TAACCTGAGTAGGGAAATAA+CGG | 0.535034 | 3.4:-22523840 | None:intergenic |
CATTCAAAGATTACTTCAAG+AGG | 0.536246 | 3.4:+22523962 | MS.gene82276:CDS |
TAGGCTATCTGAGCCCTACA+AGG | 0.536940 | 3.4:+22523738 | MS.gene82276:CDS |
GATTCTAAGGCAGCTAAGAA+AGG | 0.539062 | 3.4:+22524120 | MS.gene82276:CDS |
CAGCTAAGAAAGGTGGAGAA+AGG | 0.539801 | 3.4:+22524130 | MS.gene82276:CDS |
GCCGGTAACTTGGCATCTGG+AGG | 0.542254 | 3.4:+22524030 | MS.gene82276:CDS |
GAAAATGGCTAACCTGAGTA+GGG | 0.543044 | 3.4:-22523849 | None:intergenic |
GAGAATCTTTGGGACATGGC+AGG | 0.547914 | 3.4:-22523469 | None:intergenic |
GTTATTGACTTTCTCATGGG+TGG | 0.552168 | 3.4:+22523625 | MS.gene82276:CDS |
TTGCTACTGATGGAATTGCT+GGG | 0.552525 | 3.4:+22524190 | MS.gene82276:CDS |
ACTTAGCACCCTCATTCTTG+AGG | 0.554699 | 3.4:-22524603 | None:intergenic |
TCAACAGTTGCCCTGCAAGT+GGG | 0.556580 | 3.4:-22523535 | None:intergenic |
AAAAGAACAATGGCCGATGA+GGG | 0.560661 | 3.4:+22523778 | MS.gene82276:CDS |
GGACATGGCAGGATGGCGGT+AGG | 0.563819 | 3.4:-22523458 | None:intergenic |
TGTCCCAAAGATTCTCCTAT+GGG | 0.564873 | 3.4:+22523476 | MS.gene82276:CDS |
GATTTGTTGGAATGCATCAA+AGG | 0.565548 | 3.4:-22524581 | None:intergenic |
GGTGGAGAAAGGCAGTTCAA+TGG | 0.572074 | 3.4:+22524141 | MS.gene82276:CDS |
TAAAAGAACAATGGCCGATG+AGG | 0.576304 | 3.4:+22523777 | MS.gene82276:CDS |
CTTGGATGGCTCATTACCAA+TGG | 0.580145 | 3.4:+22524475 | MS.gene82276:CDS |
GGTCTTTCATCTGGATTTAG+GGG | 0.580823 | 3.4:+22523424 | MS.gene82276:CDS |
CAATCACCAATACCCTTGTA+GGG | 0.581476 | 3.4:-22523751 | None:intergenic |
AACAGTTGCCCTGCAAGTGG+GGG | 0.584275 | 3.4:-22523533 | None:intergenic |
GAGAGCAACAATACCCTCAT+CGG | 0.586821 | 3.4:-22523791 | None:intergenic |
ATGAGATGATCAAGTCTGGT+AGG | 0.599652 | 3.4:+22523719 | MS.gene82276:CDS |
CAAGAGAGTAAACAAACAAG+AGG | 0.602030 | 3.4:-22524071 | None:intergenic |
CAGATGAAAGACCCGATCGA+CGG | 0.603535 | 3.4:-22523414 | None:intergenic |
ATCTTTGGGACATGGCAGGA+TGG | 0.604045 | 3.4:-22523465 | None:intergenic |
AACTTCAAGAAGGACAGGGA+TGG | 0.606997 | 3.4:+22523991 | MS.gene82276:CDS |
CGCTGCATTGCAGAATCCAA+TGG | 0.607456 | 3.4:+22523510 | MS.gene82276:CDS |
CAACAAATCCTCAAGAATGA+GGG | 0.607876 | 3.4:+22524595 | MS.gene82276:CDS |
ATGAAAGACCCGATCGACGG+TGG | 0.608954 | 3.4:-22523411 | None:intergenic |
GGTATTGTTGCTCTCTGGAG+AGG | 0.610023 | 3.4:+22523799 | MS.gene82276:CDS |
GCAACCAACAATCATGGAGA+AGG | 0.628211 | 3.4:+22523375 | MS.gene82276:CDS |
GGCAAGAAATACGGATCTGG+TGG | 0.628657 | 3.4:+22524718 | MS.gene82276:CDS |
TCTAAGGCAGCTAAGAAAGG+TGG | 0.629619 | 3.4:+22524123 | MS.gene82276:CDS |
GTAAACAAACAAGAGGGATG+AGG | 0.631365 | 3.4:-22524064 | None:intergenic |
CACAGGAGATGTTGAAACCA+CGG | 0.633206 | 3.4:-22524218 | None:intergenic |
ATAGGAGAATCTTTGGGACA+TGG | 0.635000 | 3.4:-22523473 | None:intergenic |
TTTCAACTTCAAGAAGGACA+GGG | 0.637221 | 3.4:+22523987 | MS.gene82276:CDS |
AGGGAAATAACGGATAACAT+TGG | 0.640612 | 3.4:-22523830 | None:intergenic |
GGTGCTAAGTCATTGTTCAA+GGG | 0.642143 | 3.4:+22524616 | MS.gene82276:CDS |
GGAATTGCTGGGCTTTACCG+TGG | 0.654046 | 3.4:+22524201 | MS.gene82276:CDS |
AAGAGAGTAAACAAACAAGA+GGG | 0.655445 | 3.4:-22524070 | None:intergenic |
GTAGACAATGATTCCAACAC+AGG | 0.657927 | 3.4:-22524235 | None:intergenic |
AGCGTTTGAGTAGTTCCCAT+AGG | 0.663946 | 3.4:-22523491 | None:intergenic |
CAGCACCAGCAACGGCACGG+AGG | 0.668727 | 3.4:-22524654 | None:intergenic |
TTGCTTAACCTGATCAACCA+TGG | 0.675233 | 3.4:-22523356 | None:intergenic |
TTTGGGACATGGCAGGATGG+CGG | 0.679753 | 3.4:-22523462 | None:intergenic |
TTCTCCTAACAGTGTCAATG+GGG | 0.682740 | 3.4:-22524516 | None:intergenic |
AGGCTATCTGAGCCCTACAA+GGG | 0.684234 | 3.4:+22523739 | MS.gene82276:CDS |
GTTGGAATCATTGTCTACCG+TGG | 0.700486 | 3.4:+22524240 | MS.gene82276:CDS |
ACAATCCAAAGTACAGACCA+CGG | 0.710090 | 3.4:-22524257 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAAAATTGAAAACTAGAAAA+TGG | - | chr3.4:22523867-22523886 | None:intergenic | 15.0% |
!! | AATGAATATCATTTGTTCAA+AGG | - | chr3.4:22524338-22524357 | None:intergenic | 20.0% |
!! | ATGAATATCATTTGTTCAAA+GGG | - | chr3.4:22524337-22524356 | None:intergenic | 20.0% |
!! | CATTAAATACACAAAACAAT+TGG | - | chr3.4:22523897-22523916 | None:intergenic | 20.0% |
!! | TGCATCGAAAAATAATAATT+TGG | - | chr3.4:22524365-22524384 | None:intergenic | 20.0% |
!!! | TGATTGTTTTAAAAGAACAA+TGG | + | chr3.4:22523768-22523787 | MS.gene82276:CDS | 20.0% |
! | AAAAGCTTAATACGTTCAAT+GGG | - | chr3.4:22523685-22523704 | None:intergenic | 25.0% |
!! | TCTGCTATTTAAATTGTTCT+AGG | + | chr3.4:22523927-22523946 | MS.gene82276:intron | 25.0% |
AAGAGAGTAAACAAACAAGA+GGG | - | chr3.4:22524073-22524092 | None:intergenic | 30.0% | |
CAAAAGCTTAATACGTTCAA+TGG | - | chr3.4:22523686-22523705 | None:intergenic | 30.0% | |
CATTCAAAGATTACTTCAAG+AGG | + | chr3.4:22523962-22523981 | MS.gene82276:CDS | 30.0% | |
TGAGAAAGTCAATAACGAAA+TGG | - | chr3.4:22523621-22523640 | None:intergenic | 30.0% | |
! | TTTTGAACTCTTGACATTAC+AGG | + | chr3.4:22524429-22524448 | MS.gene82276:intron | 30.0% |
!! | TTCGTTATTGACTTTCTCAT+GGG | + | chr3.4:22523622-22523641 | MS.gene82276:CDS | 30.0% |
!! | TTTCGTTATTGACTTTCTCA+TGG | + | chr3.4:22523621-22523640 | MS.gene82276:CDS | 30.0% |
CAACAAATCCTCAAGAATGA+GGG | + | chr3.4:22524595-22524614 | MS.gene82276:CDS | 35.0% | |
CAAGAGAGTAAACAAACAAG+AGG | - | chr3.4:22524074-22524093 | None:intergenic | 35.0% | |
TAACCTGAGTAGGGAAATAA+CGG | - | chr3.4:22523843-22523862 | None:intergenic | 35.0% | |
TTTCAACTTCAAGAAGGACA+GGG | + | chr3.4:22523987-22524006 | MS.gene82276:CDS | 35.0% | |
! | AATTTTCCAGTGAGAAGAAC+TGG | - | chr3.4:22524297-22524316 | None:intergenic | 35.0% |
! | AGAAGAATGATGATGACATC+CGG | + | chr3.4:22524535-22524554 | MS.gene82276:CDS | 35.0% |
! | TAAGCTTTTGATCCAAAACC+AGG | + | chr3.4:22523696-22523715 | MS.gene82276:CDS | 35.0% |
! | TTTTCAACTTCAAGAAGGAC+AGG | + | chr3.4:22523986-22524005 | MS.gene82276:CDS | 35.0% |
!! | AGGGAAATAACGGATAACAT+TGG | - | chr3.4:22523833-22523852 | None:intergenic | 35.0% |
!! | GATTTGTTGGAATGCATCAA+AGG | - | chr3.4:22524584-22524603 | None:intergenic | 35.0% |
AAAAGAACAATGGCCGATGA+GGG | + | chr3.4:22523778-22523797 | MS.gene82276:CDS | 40.0% | |
AAGAAGACTCTTGCTACTGA+TGG | + | chr3.4:22524180-22524199 | MS.gene82276:CDS | 40.0% | |
AAGTTGCAGGTTCTTGTGTT+CGG | + | chr3.4:22524697-22524716 | MS.gene82276:CDS | 40.0% | |
AATCATTGGCAAGACGAGTA+CGG | - | chr3.4:22524104-22524123 | None:intergenic | 40.0% | |
ACAATCACCAATACCCTTGT+AGG | - | chr3.4:22523755-22523774 | None:intergenic | 40.0% | |
ACAATCCAAAGTACAGACCA+CGG | - | chr3.4:22524260-22524279 | None:intergenic | 40.0% | |
AGAAAATGGCTAACCTGAGT+AGG | - | chr3.4:22523853-22523872 | None:intergenic | 40.0% | |
AGTTCCCATAGGAGAATCTT+TGG | - | chr3.4:22523483-22523502 | None:intergenic | 40.0% | |
ATGAGATGATCAAGTCTGGT+AGG | + | chr3.4:22523719-22523738 | MS.gene82276:CDS | 40.0% | |
ATGTCCCAAAGATTCTCCTA+TGG | + | chr3.4:22523475-22523494 | MS.gene82276:CDS | 40.0% | |
CAATCACCAATACCCTTGTA+GGG | - | chr3.4:22523754-22523773 | None:intergenic | 40.0% | |
CCAACAAATCCTCAAGAATG+AGG | + | chr3.4:22524594-22524613 | MS.gene82276:CDS | 40.0% | |
CCTCATTCTTGAGGATTTGT+TGG | - | chr3.4:22524597-22524616 | None:intergenic | 40.0% | |
CTTAGCTGCCTTAGAATCAT+TGG | - | chr3.4:22524118-22524137 | None:intergenic | 40.0% | |
CTTCTCCTAACAGTGTCAAT+GGG | - | chr3.4:22524520-22524539 | None:intergenic | 40.0% | |
CTTGTGTTCGGCAAGAAATA+CGG | + | chr3.4:22524709-22524728 | MS.gene82276:CDS | 40.0% | |
GAAAATGGCTAACCTGAGTA+GGG | - | chr3.4:22523852-22523871 | None:intergenic | 40.0% | |
GGGTCTTTCATCTGGATTTA+GGG | + | chr3.4:22523423-22523442 | MS.gene82276:CDS | 40.0% | |
GGTCTTTCATCTGGATTTAG+GGG | + | chr3.4:22523424-22523443 | MS.gene82276:CDS | 40.0% | |
GGTGCTAAGTCATTGTTCAA+GGG | + | chr3.4:22524616-22524635 | MS.gene82276:CDS | 40.0% | |
GGTTAAGCAACCAACAATCA+TGG | + | chr3.4:22523369-22523388 | MS.gene82276:CDS | 40.0% | |
GTAAACAAACAAGAGGGATG+AGG | - | chr3.4:22524067-22524086 | None:intergenic | 40.0% | |
GTAGACAATGATTCCAACAC+AGG | - | chr3.4:22524238-22524257 | None:intergenic | 40.0% | |
GTTCCCATAGGAGAATCTTT+GGG | - | chr3.4:22523482-22523501 | None:intergenic | 40.0% | |
TAAAAGAACAATGGCCGATG+AGG | + | chr3.4:22523777-22523796 | MS.gene82276:CDS | 40.0% | |
TCGTCTTGCCAATGATTCTA+AGG | + | chr3.4:22524107-22524126 | MS.gene82276:CDS | 40.0% | |
TCTGGATTTAGGGGTTATGA+AGG | + | chr3.4:22523433-22523452 | MS.gene82276:CDS | 40.0% | |
TCTTCTCACTGGAAAATTGC+AGG | + | chr3.4:22524299-22524318 | MS.gene82276:CDS | 40.0% | |
TCTTCTCCTAACAGTGTCAA+TGG | - | chr3.4:22524521-22524540 | None:intergenic | 40.0% | |
TGTCCCAAAGATTCTCCTAT+GGG | + | chr3.4:22523476-22523495 | MS.gene82276:CDS | 40.0% | |
TTCTCCTAACAGTGTCAATG+GGG | - | chr3.4:22524519-22524538 | None:intergenic | 40.0% | |
TTGCTACTGATGGAATTGCT+GGG | + | chr3.4:22524190-22524209 | MS.gene82276:CDS | 40.0% | |
! | GAGGCTTTTCAACTTCAAGA+AGG | + | chr3.4:22523981-22524000 | MS.gene82276:CDS | 40.0% |
! | TATCCGTTATTTCCCTACTC+AGG | + | chr3.4:22523837-22523856 | MS.gene82276:CDS | 40.0% |
! | TGATCATCTCATCCTGGTTT+TGG | - | chr3.4:22523711-22523730 | None:intergenic | 40.0% |
! | TTCTGGTTATGACAAGTTGC+AGG | + | chr3.4:22524684-22524703 | MS.gene82276:CDS | 40.0% |
!! | AGTGAGAAGAACTGGTTTGA+GGG | - | chr3.4:22524289-22524308 | None:intergenic | 40.0% |
!! | ATAGGAGAATCTTTGGGACA+TGG | - | chr3.4:22523476-22523495 | None:intergenic | 40.0% |
!! | GATTCTAAGGCAGCTAAGAA+AGG | + | chr3.4:22524120-22524139 | MS.gene82276:CDS | 40.0% |
!! | GTTATTGACTTTCTCATGGG+TGG | + | chr3.4:22523625-22523644 | MS.gene82276:CDS | 40.0% |
AACTTCAAGAAGGACAGGGA+TGG | + | chr3.4:22523991-22524010 | MS.gene82276:CDS | 45.0% | |
AAGTCATTGTTCAAGGGAGC+TGG | + | chr3.4:22524622-22524641 | MS.gene82276:CDS | 45.0% | |
ACAATCATGGAGAAGGTCAC+TGG | + | chr3.4:22523382-22523401 | MS.gene82276:CDS | 45.0% | |
ACAGGGATGGTTACTGGAAA+TGG | + | chr3.4:22524004-22524023 | MS.gene82276:CDS | 45.0% | |
ACTTAGCACCCTCATTCTTG+AGG | - | chr3.4:22524606-22524625 | None:intergenic | 45.0% | |
AGCGTTTGAGTAGTTCCCAT+AGG | - | chr3.4:22523494-22523513 | None:intergenic | 45.0% | |
ATCATTGGCAAGACGAGTAC+GGG | - | chr3.4:22524103-22524122 | None:intergenic | 45.0% | |
CACAGGAGATGTTGAAACCA+CGG | - | chr3.4:22524221-22524240 | None:intergenic | 45.0% | |
CAGACTTGATCATCTCATCC+TGG | - | chr3.4:22523717-22523736 | None:intergenic | 45.0% | |
CAGCTAAGAAAGGTGGAGAA+AGG | + | chr3.4:22524130-22524149 | MS.gene82276:CDS | 45.0% | |
CAGGATGAGATGATCAAGTC+TGG | + | chr3.4:22523715-22523734 | MS.gene82276:CDS | 45.0% | |
CATACCCCATTGACACTGTT+AGG | + | chr3.4:22524512-22524531 | MS.gene82276:CDS | 45.0% | |
CGGGTCTTTCATCTGGATTT+AGG | + | chr3.4:22523422-22523441 | MS.gene82276:CDS | 45.0% | |
CTCAAACCAGTTCTTCTCAC+TGG | + | chr3.4:22524288-22524307 | MS.gene82276:CDS | 45.0% | |
CTTGCTACTGATGGAATTGC+TGG | + | chr3.4:22524189-22524208 | MS.gene82276:CDS | 45.0% | |
CTTGGATGGCTCATTACCAA+TGG | + | chr3.4:22524475-22524494 | MS.gene82276:CDS | 45.0% | |
CTTGTACTTGACAGCTTCTC+CGG | - | chr3.4:22524557-22524576 | None:intergenic | 45.0% | |
GAGAGCAACAATACCCTCAT+CGG | - | chr3.4:22523794-22523813 | None:intergenic | 45.0% | |
GCAACCAACAATCATGGAGA+AGG | + | chr3.4:22523375-22523394 | MS.gene82276:CDS | 45.0% | |
GGGTGCTAAGTCATTGTTCA+AGG | + | chr3.4:22524615-22524634 | MS.gene82276:CDS | 45.0% | |
GGTTTCAACATCTCCTGTGT+TGG | + | chr3.4:22524222-22524241 | MS.gene82276:CDS | 45.0% | |
GTGACCTTCTCCATGATTGT+TGG | - | chr3.4:22523382-22523401 | None:intergenic | 45.0% | |
GTTGGAATCATTGTCTACCG+TGG | + | chr3.4:22524240-22524259 | MS.gene82276:CDS | 45.0% | |
TTCGGCAAGAAATACGGATC+TGG | + | chr3.4:22524715-22524734 | MS.gene82276:CDS | 45.0% | |
! | ACGAAATGGCTCTTTTCTGC+TGG | - | chr3.4:22523607-22523626 | None:intergenic | 45.0% |
! | GAAATGGTTTGCCGGTAACT+TGG | + | chr3.4:22524020-22524039 | MS.gene82276:CDS | 45.0% |
! | GGTTACTGGAAATGGTTTGC+CGG | + | chr3.4:22524012-22524031 | MS.gene82276:CDS | 45.0% |
! | TCTAAGGCAGCTAAGAAAGG+TGG | + | chr3.4:22524123-22524142 | MS.gene82276:CDS | 45.0% |
!! | ATGAGGGTATTGTTGCTCTC+TGG | + | chr3.4:22523794-22523813 | MS.gene82276:CDS | 45.0% |
!! | CAGTGAGAAGAACTGGTTTG+AGG | - | chr3.4:22524290-22524309 | None:intergenic | 45.0% |
!!! | AGCAGCAGCAGTTTTGGAAA+CGG | - | chr3.4:22523662-22523681 | None:intergenic | 45.0% |
AGAAGGACAGGGATGGTTAC+TGG | + | chr3.4:22523998-22524017 | MS.gene82276:CDS | 50.0% | |
AGGCTATCTGAGCCCTACAA+GGG | + | chr3.4:22523739-22523758 | MS.gene82276:CDS | 50.0% | |
ATCAACAGTTGCCCTGCAAG+TGG | - | chr3.4:22523539-22523558 | None:intergenic | 50.0% | |
CAGATGAAAGACCCGATCGA+CGG | - | chr3.4:22523417-22523436 | None:intergenic | 50.0% | |
CGCTGCATTGCAGAATCCAA+TGG | + | chr3.4:22523510-22523529 | MS.gene82276:CDS | 50.0% | |
GGCAAGAAATACGGATCTGG+TGG | + | chr3.4:22524718-22524737 | MS.gene82276:CDS | 50.0% | |
GGTGGAGAAAGGCAGTTCAA+TGG | + | chr3.4:22524141-22524160 | MS.gene82276:CDS | 50.0% | |
GTCTACCGTGGTCTGTACTT+TGG | + | chr3.4:22524252-22524271 | MS.gene82276:CDS | 50.0% | |
TAGGCTATCTGAGCCCTACA+AGG | + | chr3.4:22523738-22523757 | MS.gene82276:CDS | 50.0% | |
TCAACAGTTGCCCTGCAAGT+GGG | - | chr3.4:22523538-22523557 | None:intergenic | 50.0% | |
TCCTCCAGATGCCAAGTTAC+CGG | - | chr3.4:22524034-22524053 | None:intergenic | 50.0% | |
TGATGCTAGACCTGCACCAT+TGG | - | chr3.4:22524494-22524513 | None:intergenic | 50.0% | |
TGGCTCATTACCAATGGTGC+AGG | + | chr3.4:22524481-22524500 | MS.gene82276:CDS | 50.0% | |
TTTGCCGGTAACTTGGCATC+TGG | + | chr3.4:22524027-22524046 | MS.gene82276:CDS | 50.0% | |
! | AATGGGAGCAGCAGCAGTTT+TGG | - | chr3.4:22523668-22523687 | None:intergenic | 50.0% |
! | GGTATTGTTGCTCTCTGGAG+AGG | + | chr3.4:22523799-22523818 | MS.gene82276:CDS | 50.0% |
! | TCTGAGCCCTACAAGGGTAT+TGG | + | chr3.4:22523745-22523764 | MS.gene82276:CDS | 50.0% |
! | TTTTTCGCCAGCTTTGCGCT+TGG | + | chr3.4:22524457-22524476 | MS.gene82276:CDS | 50.0% |
!! | ATCTTTGGGACATGGCAGGA+TGG | - | chr3.4:22523468-22523487 | None:intergenic | 50.0% |
!! | GAGAATCTTTGGGACATGGC+AGG | - | chr3.4:22523472-22523491 | None:intergenic | 50.0% |
AACAGTTGCCCTGCAAGTGG+GGG | - | chr3.4:22523536-22523555 | None:intergenic | 55.0% | |
AAGCACACCAGCACCAGCAA+CGG | - | chr3.4:22524665-22524684 | None:intergenic | 55.0% | |
ATGAAAGACCCGATCGACGG+TGG | - | chr3.4:22523414-22523433 | None:intergenic | 55.0% | |
CAACAGTTGCCCTGCAAGTG+GGG | - | chr3.4:22523537-22523556 | None:intergenic | 55.0% | |
CGTCGATCGGGTCTTTCATC+TGG | + | chr3.4:22523415-22523434 | MS.gene82276:CDS | 55.0% | |
GGAATTGCTGGGCTTTACCG+TGG | + | chr3.4:22524201-22524220 | MS.gene82276:CDS | 55.0% | |
! | TTTGGGACATGGCAGGATGG+CGG | - | chr3.4:22523465-22523484 | None:intergenic | 55.0% |
ATCCAATGGCCCCCACTTGC+AGG | + | chr3.4:22523524-22523543 | MS.gene82276:CDS | 60.0% | |
GAGCCATCCAAGCGCAAAGC+TGG | - | chr3.4:22524467-22524486 | None:intergenic | 60.0% | |
GCCGGTAACTTGGCATCTGG+AGG | + | chr3.4:22524030-22524049 | MS.gene82276:CDS | 60.0% | |
TCCAATGGCCCCCACTTGCA+GGG | + | chr3.4:22523525-22523544 | MS.gene82276:CDS | 60.0% | |
TCGCCAGCTTTGCGCTTGGA+TGG | + | chr3.4:22524461-22524480 | MS.gene82276:CDS | 60.0% | |
TTGGCATCTGGAGGAGCAGC+TGG | + | chr3.4:22524039-22524058 | MS.gene82276:CDS | 60.0% | |
! | AACATCCTCCGTGCCGTTGC+TGG | + | chr3.4:22524649-22524668 | MS.gene82276:CDS | 60.0% |
!! | GCTGGTGCTGGTGTGCTTTC+TGG | + | chr3.4:22524667-22524686 | MS.gene82276:CDS | 60.0% |
CACCAGCACCAGCAACGGCA+CGG | - | chr3.4:22524660-22524679 | None:intergenic | 65.0% | |
GCTGGAGCAGCGACGAAGAC+AGG | - | chr3.4:22523589-22523608 | None:intergenic | 65.0% | |
TGGCCAGCTCCACCGTCGAT+CGG | + | chr3.4:22523402-22523421 | MS.gene82276:CDS | 65.0% | |
! | GGACATGGCAGGATGGCGGT+AGG | - | chr3.4:22523461-22523480 | None:intergenic | 65.0% |
CAGCACCAGCAACGGCACGG+AGG | - | chr3.4:22524657-22524676 | None:intergenic | 70.0% | |
GACCCGATCGACGGTGGAGC+TGG | - | chr3.4:22523408-22523427 | None:intergenic | 70.0% | |
GCCCTGCAAGTGGGGGCCAT+TGG | - | chr3.4:22523529-22523548 | None:intergenic | 70.0% | |
GGCCAGCTCCACCGTCGATC+GGG | + | chr3.4:22523403-22523422 | MS.gene82276:CDS | 70.0% | |
! | CTCCGTGCCGTTGCTGGTGC+TGG | + | chr3.4:22524655-22524674 | MS.gene82276:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.4 | gene | 22523358 | 22524747 | 22523358 | ID=MS.gene82276 |
chr3.4 | mRNA | 22523358 | 22524747 | 22523358 | ID=MS.gene82276.t1;Parent=MS.gene82276 |
chr3.4 | exon | 22523358 | 22523858 | 22523358 | ID=MS.gene82276.t1.exon1;Parent=MS.gene82276.t1 |
chr3.4 | CDS | 22523358 | 22523858 | 22523358 | ID=cds.MS.gene82276.t1;Parent=MS.gene82276.t1 |
chr3.4 | exon | 22523949 | 22524320 | 22523949 | ID=MS.gene82276.t1.exon2;Parent=MS.gene82276.t1 |
chr3.4 | CDS | 22523949 | 22524320 | 22523949 | ID=cds.MS.gene82276.t1;Parent=MS.gene82276.t1 |
chr3.4 | exon | 22524451 | 22524747 | 22524451 | ID=MS.gene82276.t1.exon3;Parent=MS.gene82276.t1 |
chr3.4 | CDS | 22524451 | 22524747 | 22524451 | ID=cds.MS.gene82276.t1;Parent=MS.gene82276.t1 |
Gene Sequence |
Protein sequence |