AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene81223

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene81223.t1 MTR_5g097410 97.846 1114 24 0 2 1115 101 1214 0.0 2276
MS.gene81223.t1 MTR_3g085130 55.681 977 376 15 160 1113 89 1031 0.0 1046
MS.gene81223.t1 MTR_8g080770 53.387 989 403 11 144 1113 18 967 0.0 1033
MS.gene81223.t1 MTR_8g106150 53.673 980 398 13 164 1113 41 994 0.0 976
MS.gene81223.t1 MTR_8g080770 53.803 894 357 10 239 1113 2 858 0.0 941
MS.gene81223.t1 MTR_3g085130 55.100 853 328 14 284 1113 1 821 0.0 891
MS.gene81223.t1 MTR_8g106150 52.053 755 320 12 389 1113 9 751 0.0 709
MS.gene81223.t1 MTR_2g067240 52.063 315 89 3 327 639 1 255 6.63e-94 300
MS.gene81223.t1 MTR_3g105590 34.397 282 168 7 521 793 373 646 1.48e-35 147
MS.gene81223.t1 MTR_3g105590 35.115 131 77 2 976 1099 805 934 5.85e-15 80.5
MS.gene81223.t1 MTR_1g013360 33.443 305 169 7 521 793 379 681 1.85e-34 143
MS.gene81223.t1 MTR_1g013360 34.109 129 78 2 977 1099 870 997 5.34e-13 74.3
MS.gene81223.t1 MTR_8g075340 27.341 534 311 16 473 967 426 921 2.78e-33 140
MS.gene81223.t1 MTR_8g075340 31.944 144 61 4 976 1101 1030 1154 7.21e-12 70.5
MS.gene81223.t1 MTR_5g022470 31.288 326 190 6 473 789 464 764 1.17e-32 138
MS.gene81223.t1 MTR_5g022470 30.994 171 68 4 957 1101 1038 1184 5.11e-13 74.3
MS.gene81223.t1 MTR_5g022470 31.288 326 190 6 473 789 464 764 1.24e-32 137
MS.gene81223.t1 MTR_5g044100 46.207 145 53 3 903 1046 103 223 9.93e-31 121
MS.gene81223.t1 MTR_4g031150 26.895 409 246 6 512 906 387 756 3.39e-28 122
MS.gene81223.t1 MTR_7g109150 30.389 283 158 5 512 793 338 582 9.33e-25 111
MS.gene81223.t1 MTR_1g087140 26.111 360 216 12 477 809 346 682 2.30e-23 107
MS.gene81223.t1 MTR_1g087140 31.757 148 67 6 975 1112 973 1096 9.42e-12 70.1
MS.gene81223.t1 MTR_1g090850 25.948 343 227 8 477 807 335 662 2.29e-20 98.2
MS.gene81223.t1 MTR_1g090850 33.333 177 88 5 940 1109 892 1045 1.31e-13 76.3
MS.gene81223.t1 MTR_1g073840 22.103 466 305 12 497 956 344 757 3.68e-13 74.3
MS.gene81223.t1 MTR_7g116330 20.680 353 232 7 505 853 362 670 9.34e-12 69.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene81223.t1 AT5G35750 64.976 1025 333 9 101 1116 169 1176 0.0 1314
MS.gene81223.t1 AT1G27320 56.000 950 379 11 177 1114 107 1029 0.0 1043
MS.gene81223.t1 AT2G01830 53.381 976 397 16 163 1113 118 1060 0.0 975
MS.gene81223.t1 AT2G01830 53.381 976 397 16 163 1113 106 1048 0.0 974
MS.gene81223.t1 AT2G01830 53.381 976 397 16 163 1113 106 1048 0.0 974
MS.gene81223.t1 AT2G01830 53.381 976 397 16 163 1113 106 1048 0.0 974
MS.gene81223.t1 AT2G01830 53.381 976 397 16 163 1113 106 1048 0.0 974
MS.gene81223.t1 AT2G01830 53.381 976 397 16 163 1113 129 1071 0.0 974
MS.gene81223.t1 AT5G10720 35.689 283 149 6 521 803 369 618 5.09e-40 161
MS.gene81223.t1 AT5G10720 34.615 130 78 3 976 1099 779 907 2.25e-13 75.5
MS.gene81223.t1 AT2G17820 31.098 328 188 6 473 789 453 753 2.57e-35 146
MS.gene81223.t1 AT1G66340 30.460 348 193 6 512 853 337 641 1.08e-33 140
MS.gene81223.t1 AT2G40940 32.155 283 153 6 512 793 337 581 1.68e-24 110
MS.gene81223.t1 AT2G47430 27.273 308 177 10 507 793 384 665 4.50e-22 103
MS.gene81223.t1 AT2G47430 34.483 174 72 7 951 1102 956 1109 3.19e-13 75.1
MS.gene81223.t1 AT3G23150 24.869 382 227 12 515 879 364 702 3.33e-12 71.2
MS.gene81223.t1 AT3G04580 31.944 144 77 4 976 1118 643 766 5.68e-11 67.4
MS.gene81223.t1 AT3G04580 31.944 144 77 4 976 1118 643 766 5.68e-11 67.4

Find 235 sgRNAs with CRISPR-Local

Find 370 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTTCCTTGGACAGCATTC+TGG 0.103589 5.2:+81717031 MS.gene81223:CDS
ATTAATTACCCGTCCATTTC+TGG 0.122771 5.2:-81719339 None:intergenic
ATTGATACACAAACGAATTT+TGG 0.159316 5.2:+81719164 MS.gene81223:CDS
CCCTTTGGCCTCTGAGTTCC+AGG 0.193078 5.2:+81718583 MS.gene81223:CDS
GTTTGACTGCAGAAAATATT+TGG 0.207225 5.2:+81715815 MS.gene81223:intron
GGATGTTGTTTGGTCCTTAT+TGG 0.219358 5.2:+81715234 MS.gene81223:CDS
TTGGACTTTAGTAGTTTAAA+AGG 0.222874 5.2:-81716328 None:intergenic
AAAGTTTCAAAAGTTAAATT+TGG 0.231203 5.2:+81718268 MS.gene81223:CDS
GTTAATGTGTCCGAAGAATT+TGG 0.236764 5.2:+81714405 MS.gene81223:CDS
CTTTAGCTCCTTCTGCTCAT+TGG 0.237386 5.2:-81719010 None:intergenic
AATTTATCTAGTTTAATTAA+AGG 0.239445 5.2:+81715213 MS.gene81223:CDS
TTTAGCTCCTTCTGCTCATT+GGG 0.261024 5.2:-81719009 None:intergenic
CACGTAAGCGGTCTAGATTT+TGG 0.265877 5.2:+81716879 MS.gene81223:CDS
ACAGCATTCTGGGCATCCTT+GGG 0.276319 5.2:+81717042 MS.gene81223:CDS
GACCTCATGGGAGGAGAAAT+TGG 0.278166 5.2:+81718461 MS.gene81223:CDS
TCCATGTATTGGAAGGTATC+TGG 0.278596 5.2:+81716707 MS.gene81223:intron
TTTGTTATTACCTTTCTTCT+TGG 0.283122 5.2:+81717069 MS.gene81223:CDS
ACCCGTCCATTTCTGGCATT+TGG 0.297045 5.2:-81719332 None:intergenic
TTGGTTCTGCATGGTTATTT+AGG 0.298048 5.2:+81715439 MS.gene81223:CDS
ACCACTCGTGTGAGCAGTTT+GGG 0.298376 5.2:-81717618 None:intergenic
TTTCAGTTCATTCACAATAA+AGG 0.310106 5.2:+81718083 MS.gene81223:intron
GACAGCATTCTGGGCATCCT+TGG 0.312293 5.2:+81717041 MS.gene81223:CDS
CAAATAATTACCAATCTTGT+TGG 0.322920 5.2:+81717965 MS.gene81223:CDS
TGAACAAAGTCATCAAGAAT+TGG 0.326747 5.2:-81714475 None:intergenic
AAGTACAACACCGAGGTAAT+TGG 0.329193 5.2:-81716347 None:intergenic
GGGTGGTAAGGCTGCTCTTA+AGG 0.331631 5.2:+81719266 MS.gene81223:CDS
TGTTTGGTAACATTTCTTAC+TGG 0.332153 5.2:+81719526 MS.gene81223:CDS
GAAGGTGTTCTGCGAAAATA+TGG 0.332772 5.2:+81719222 MS.gene81223:CDS
TCTGAAAAGTCCGATGAAAA+AGG 0.335369 5.2:+81717764 MS.gene81223:CDS
TTCTTATAGACAAGGATTCT+TGG 0.335599 5.2:+81718878 MS.gene81223:CDS
TGGTTGGACAATTAAGAAAA+TGG 0.343061 5.2:+81715940 MS.gene81223:CDS
GACTAGGCTAATCCGGTATA+TGG 0.343716 5.2:+81719455 MS.gene81223:CDS
ATTTCCTTGGACAGCATTCT+GGG 0.350113 5.2:+81717032 MS.gene81223:CDS
TGGACTTTAGTAGTTTAAAA+GGG 0.352298 5.2:-81716327 None:intergenic
ATTATTTGTCGGAAGCGTTT+AGG 0.353184 5.2:-81717950 None:intergenic
AATTGCTTGTGGGGAAGAAT+TGG 0.353403 5.2:+81719497 MS.gene81223:CDS
CGCTGTTCAGGCGTAGCATC+TGG 0.360966 5.2:-81716400 None:intergenic
TTTGTAAGTGAGCCTGAAAT+TGG 0.376302 5.2:+81718485 MS.gene81223:CDS
TACCACTCGTGTGAGCAGTT+TGG 0.378780 5.2:-81717619 None:intergenic
ATGTACTAATGAAGCCTCTT+TGG 0.380444 5.2:+81719052 MS.gene81223:CDS
CCTCCTTTCATCAATACAAT+TGG 0.381731 5.2:-81714341 None:intergenic
TTACCTAAAACACCATTCAT+TGG 0.382326 5.2:-81717452 None:intergenic
CAGAATGCTGTCCAAGGAAA+TGG 0.384642 5.2:-81717030 None:intergenic
TGAAAGTTCTCCATTCTGAT+AGG 0.384878 5.2:+81715897 MS.gene81223:CDS
CGATGACAACTTCAGGTACT+TGG 0.385643 5.2:-81717922 None:intergenic
TTTATGTCAGTTGGAATCCT+TGG 0.387171 5.2:+81715420 MS.gene81223:CDS
TGGGGCTAAGGTGGGTGGCC+AGG 0.387928 5.2:-81718990 None:intergenic
TCGGTACCATACATCGTAAT+AGG 0.388024 5.2:-81716834 None:intergenic
GGATCTCCAAATGCCAGAAA+TGG 0.388575 5.2:+81719326 MS.gene81223:CDS
AAGCGAATTTCCAACAAGAT+TGG 0.391875 5.2:-81717975 None:intergenic
TTTAATTAAAGGATGTTGTT+TGG 0.394773 5.2:+81715224 MS.gene81223:CDS
TCTTATAGACAAGGATTCTT+GGG 0.395654 5.2:+81718879 MS.gene81223:CDS
TCAAAAGCAGAAGGTAGTTA+AGG 0.396948 5.2:+81715305 MS.gene81223:CDS
TGAAGAAGAGCAACTCTATA+CGG 0.397116 5.2:+81719644 MS.gene81223:CDS
TACAGAGAATCCCTTGGAAC+TGG 0.398252 5.2:+81719096 MS.gene81223:CDS
TCGCGAACATACGGTGGAAC+TGG 0.403424 5.2:+81718407 MS.gene81223:CDS
TCTTGTTGGAAATTCGCTTA+AGG 0.406803 5.2:+81717979 MS.gene81223:CDS
ACATACGGTGGAACTGGAAT+AGG 0.407969 5.2:+81718413 MS.gene81223:CDS
AGCATATGCCTCCATTTCCT+TGG 0.407983 5.2:+81717019 MS.gene81223:CDS
GGTACCGATGTTCTTGATAC+TGG 0.414059 5.2:+81716849 MS.gene81223:CDS
GAAGAATTGGCAGAGATGTT+TGG 0.417574 5.2:+81719510 MS.gene81223:CDS
CGAGCAAGGGCATCTGGAAA+GGG 0.420999 5.2:+81716292 MS.gene81223:CDS
AGAATGCTTAAACTTGAATC+AGG 0.423838 5.2:+81718178 MS.gene81223:CDS
GGGACAGTATAATGCCAATA+AGG 0.430051 5.2:-81715248 None:intergenic
ATACTGTCCCACAAGTTGTC+TGG 0.431443 5.2:+81715261 MS.gene81223:CDS
GAACAAAGTCATCAAGAATT+GGG 0.433982 5.2:-81714474 None:intergenic
TAGAGTTGCTCTTCTTCAAA+TGG 0.434245 5.2:-81719639 None:intergenic
CAGAATCTGTGGATGAGAAA+TGG 0.436460 5.2:+81718549 MS.gene81223:CDS
TAAATTGATCTTGCAACATA+CGG 0.441964 5.2:-81715527 None:intergenic
GACAGCAATGGTTTGCTGAC+AGG 0.443901 5.2:-81716781 None:intergenic
CACAAGTGATGGAACATCAT+AGG 0.445281 5.2:-81716736 None:intergenic
AGCTTGGATTATCATTCCCT+TGG 0.446435 5.2:+81714503 MS.gene81223:CDS
CTGCTCATTGGGGCTAAGGT+GGG 0.446711 5.2:-81718998 None:intergenic
GTATCCATCGACATGATGTC+AGG 0.447012 5.2:+81716076 MS.gene81223:CDS
CCTTCTGCTCATTGGGGCTA+AGG 0.447909 5.2:-81719002 None:intergenic
GGATCGCCGATGACAACTTC+AGG 0.448585 5.2:-81717929 None:intergenic
GACTTTGTTCACATGAAGCT+TGG 0.449258 5.2:+81714487 MS.gene81223:CDS
GTAGCTTCAATACGCTGTTC+AGG 0.450753 5.2:-81716412 None:intergenic
TGCAGATGTCGCAAAATCTC+AGG 0.453763 5.2:+81717179 MS.gene81223:CDS
GAAGAATTTGGAGTTACAAA+AGG 0.453998 5.2:+81714417 MS.gene81223:CDS
TAGGAAACAGATGGAAAAGC+TGG 0.456035 5.2:+81718243 MS.gene81223:CDS
TCTGATCCTATTACGATGTA+TGG 0.457715 5.2:+81716828 MS.gene81223:CDS
GATGAGGGTGTGTGCGATTG+TGG 0.459371 5.2:+81715182 MS.gene81223:CDS
CAAGATTGGTAATTATTTGT+CGG 0.462240 5.2:-81717961 None:intergenic
TGGAGAATATACAGAGAGTT+CGG 0.464515 5.2:+81715835 MS.gene81223:CDS
TTGAGGTGACTAGGCTAATC+CGG 0.464950 5.2:+81719448 MS.gene81223:CDS
ACCAGTAGCCTTTGAATGAC+CGG 0.467332 5.2:-81715370 None:intergenic
TCTGCTCATTGGGGCTAAGG+TGG 0.472855 5.2:-81718999 None:intergenic
CTCATTGGGGCTAAGGTGGG+TGG 0.473446 5.2:-81718995 None:intergenic
AGAATGTATTCCAGAAAACT+TGG 0.474067 5.2:+81715988 MS.gene81223:CDS
AGGTATGCTGCAAATGTTGA+TGG 0.474230 5.2:+81717562 MS.gene81223:intron
CGACAGTTTCACATGAGATC+AGG 0.474661 5.2:+81717426 MS.gene81223:CDS
ATCAAAACACTTTGCCAAAG+AGG 0.475890 5.2:-81719066 None:intergenic
TGGTGCATATTCATCTTGAA+TGG 0.477295 5.2:-81716020 None:intergenic
CATATTTACACCTTTCATGC+AGG 0.477916 5.2:+81718370 MS.gene81223:CDS
ATCCTTGTCTATAAGAATCA+TGG 0.478300 5.2:-81718872 None:intergenic
CCATGTATTGGAAGGTATCT+GGG 0.482800 5.2:+81716708 MS.gene81223:intron
GCGAGCAAGGGCATCTGGAA+AGG 0.484052 5.2:+81716291 MS.gene81223:CDS
CAAGGACAGAATGGCGTCAA+AGG 0.488603 5.2:+81718937 MS.gene81223:CDS
TTACCTCGTTCTCCATATAC+CGG 0.488691 5.2:-81719467 None:intergenic
AATCCATCTGATTGTCATCA+AGG 0.489725 5.2:-81717592 None:intergenic
CCCGGTCATTCAAAGGCTAC+TGG 0.491515 5.2:+81715369 MS.gene81223:CDS
AATGTTACATATGCTTTCCA+AGG 0.494279 5.2:-81714520 None:intergenic
AATAAATCGAATAGCTAAAG+TGG 0.498068 5.2:+81717110 MS.gene81223:CDS
ACGATATCACCTGCAGAGGT+TGG 0.499162 5.2:+81718655 MS.gene81223:CDS
CGGATTCAACATTGTATGCC+CGG 0.499645 5.2:+81715351 MS.gene81223:CDS
CCTCGACTGTTACTAGTAGT+TGG 0.500006 5.2:-81718310 None:intergenic
ACAGTCGAGGACACTGGTAT+AGG 0.500734 5.2:+81718323 MS.gene81223:CDS
TGTCCAATTGTATTGATGAA+AGG 0.501841 5.2:+81714338 MS.gene81223:CDS
CAGCATTCTGGGCATCCTTG+GGG 0.503392 5.2:+81717043 MS.gene81223:CDS
AACAAAAGCCAGACAACTTG+TGG 0.503467 5.2:-81715269 None:intergenic
CGATATCACCTGCAGAGGTT+GGG 0.504786 5.2:+81718656 MS.gene81223:CDS
ACATCCTTCCGCAGTTGACC+AGG 0.506511 5.2:+81715611 MS.gene81223:CDS
TTACTAATGCTCTCAAACCC+TGG 0.510047 5.2:-81718601 None:intergenic
TTGGAATCCTTGGTTCTGCA+TGG 0.513364 5.2:+81715430 MS.gene81223:CDS
AGTCGTATTTGCTCAAGAAA+CGG 0.515422 5.2:+81716042 MS.gene81223:CDS
CAAAATGCATCCTATCAGAA+TGG 0.515566 5.2:-81715907 None:intergenic
AGTTCCACATCGCGAACATA+CGG 0.515602 5.2:+81718398 MS.gene81223:CDS
TACCTGTGTGGAGGGTGGTA+AGG 0.516659 5.2:+81719254 MS.gene81223:CDS
GAAGAGTCCACTTCACATCA+TGG 0.518980 5.2:+81718142 MS.gene81223:CDS
ATGGCAGAAGAATAACCCTT+TGG 0.523166 5.2:+81718568 MS.gene81223:CDS
GAGCAAAACGTTAACCAAAT+CGG 0.525792 5.2:-81714560 None:intergenic
CCTGGAACTCAGAGGCCAAA+GGG 0.527638 5.2:-81718583 None:intergenic
CAGACATGCCCAACCTCTGC+AGG 0.530444 5.2:-81718664 None:intergenic
GGACTTTAGTAGTTTAAAAG+GGG 0.531138 5.2:-81716326 None:intergenic
GGTGCATATTCATCTTGAAT+GGG 0.531343 5.2:-81716019 None:intergenic
AAATTGATCTTGCAACATAC+GGG 0.535060 5.2:-81715526 None:intergenic
GAGTGGTAAAGATCTTATAT+CGG 0.537674 5.2:+81717634 MS.gene81223:CDS
GGCTCTCTCATCACACATAG+TGG 0.539504 5.2:-81715505 None:intergenic
TATTCATCTTGAATGGGCGC+TGG 0.540279 5.2:-81716013 None:intergenic
TCCAAATGCCAGAAATGGAC+GGG 0.542668 5.2:+81719331 MS.gene81223:CDS
CCTTTGGCCTCTGAGTTCCA+GGG 0.543146 5.2:+81718584 MS.gene81223:CDS
ATCAAGAAACAAGGACAGAA+TGG 0.546253 5.2:+81718928 MS.gene81223:CDS
CTTCAAATGTTGTTAAGTAG+TGG 0.546319 5.2:+81714364 MS.gene81223:CDS
TAAATGTCTAGTTGACCTCA+TGG 0.554358 5.2:+81718448 MS.gene81223:CDS
AGAAGCTTGTCCACAAGTGA+TGG 0.554573 5.2:-81716747 None:intergenic
TCAGCTGTCATAGCTAGTAT+TGG 0.556557 5.2:-81719555 None:intergenic
GGCCATGATTCTTATAGACA+AGG 0.556608 5.2:+81718870 MS.gene81223:CDS
TTTCAGTATGTCGACGCAGT+TGG 0.556794 5.2:+81718849 MS.gene81223:intron
CCAATTGTATTGATGAAAGG+AGG 0.556888 5.2:+81714341 MS.gene81223:CDS
AAATATATATCCAAGAAGAA+AGG 0.557028 5.2:-81717079 None:intergenic
CTATGATGTTCCATCACTTG+TGG 0.557856 5.2:+81716737 MS.gene81223:CDS
AAACAAGCATCAAAATTATG+TGG 0.560851 5.2:-81719300 None:intergenic
TTGGAAAGCATATGTAACAT+TGG 0.562808 5.2:+81714522 MS.gene81223:CDS
CCAGTAGCCTTTGAATGACC+GGG 0.563893 5.2:-81715369 None:intergenic
TAAGCAACACCACTAGTAAG+TGG 0.564076 5.2:-81715869 None:intergenic
GTCATACACATTGACAGCAA+TGG 0.567089 5.2:-81716793 None:intergenic
AAAGCAAGCAGATTGAAGAC+TGG 0.571842 5.2:-81718699 None:intergenic
ACAAAAGCCAGACAACTTGT+GGG 0.571903 5.2:-81715268 None:intergenic
CGCAACTACAGAGAATCCCT+TGG 0.572041 5.2:+81719090 MS.gene81223:CDS
CCCTGGAACTCAGAGGCCAA+AGG 0.573447 5.2:-81718584 None:intergenic
ACACAAGAATAGCGAGAGCA+TGG 0.573638 5.2:-81715569 None:intergenic
CAGAAGGAGCTAAAGTCAGT+TGG 0.574474 5.2:+81719018 MS.gene81223:CDS
GAGATCAGGACTCCAATGAA+TGG 0.574560 5.2:+81717440 MS.gene81223:CDS
AAATATGCGGCTTTGAGCAT+CGG 0.576359 5.2:-81718354 None:intergenic
TTGTATGCCCGGTCATTCAA+AGG 0.577652 5.2:+81715362 MS.gene81223:CDS
AAAAGGAGAAACAGAATCTG+TGG 0.578251 5.2:+81718538 MS.gene81223:CDS
TATCAAGCTAAGATCGAGGC+AGG 0.579435 5.2:+81717674 MS.gene81223:CDS
GAACTATCAGCCTGCATGAA+AGG 0.579814 5.2:-81718380 None:intergenic
GAAAACATGAGATGCACTGC+AGG 0.579994 5.2:+81716913 MS.gene81223:CDS
AGAACATGCAATACATTGAG+TGG 0.580850 5.2:+81718212 MS.gene81223:CDS
CCTTAGCCCCAATGAGCAGA+AGG 0.581226 5.2:+81719002 MS.gene81223:CDS
CTCCAAATGCCAGAAATGGA+CGG 0.581688 5.2:+81719330 MS.gene81223:CDS
TGGTTTGCTGACAGGCAAGC+TGG 0.582491 5.2:-81716773 None:intergenic
TTAGCTCCTTCTGCTCATTG+GGG 0.582725 5.2:-81719008 None:intergenic
GTCATTCAAAGGCTACTGGT+TGG 0.583595 5.2:+81715373 MS.gene81223:CDS
CAGCGTATTGAAGCTACTGT+GGG 0.584573 5.2:+81716418 MS.gene81223:CDS
ATTCAAAGGCTACTGGTTGG+CGG 0.585519 5.2:+81715376 MS.gene81223:CDS
CAGAGAGTTCGGCATTTGAG+AGG 0.586906 5.2:+81715846 MS.gene81223:CDS
ACATTGAGTGGATTTCCTGT+AGG 0.587511 5.2:+81718224 MS.gene81223:CDS
TTTCTGATACTTGCAACTCA+AGG 0.587800 5.2:+81718726 MS.gene81223:CDS
AAGGAAGAATCAAAAGCAGA+AGG 0.589976 5.2:+81715296 MS.gene81223:CDS
ACAGAGAATCCCTTGGAACT+GGG 0.595621 5.2:+81719097 MS.gene81223:CDS
GATTTCCTGTAGGAAACAGA+TGG 0.596201 5.2:+81718234 MS.gene81223:CDS
GATGCCCAGAATGCTGTCCA+AGG 0.597141 5.2:-81717036 None:intergenic
ATCCACCTGCTCCACAAAAG+CGG 0.599663 5.2:+81715331 MS.gene81223:CDS
TGACCTTGATGACAATCAGA+TGG 0.600124 5.2:+81717589 MS.gene81223:CDS
CAAGCATCAAAATTATGTGG+TGG 0.600540 5.2:-81719297 None:intergenic
GTTTCTTGAGCAAATACGAC+TGG 0.600912 5.2:-81716040 None:intergenic
GCAGTAGTTACCTGTGTGGA+GGG 0.602358 5.2:+81719246 MS.gene81223:CDS
GAATAGCGAGAGCATGGACA+TGG 0.603489 5.2:-81715563 None:intergenic
AGCAAGGGCATCTGGAAAGG+GGG 0.603947 5.2:+81716294 MS.gene81223:CDS
ATGTTACATATGCTTTCCAA+GGG 0.605409 5.2:-81714519 None:intergenic
AGACAAGGATTCTTGGGACA+AGG 0.605502 5.2:+81718885 MS.gene81223:CDS
GAGCAAGGGCATCTGGAAAG+GGG 0.605827 5.2:+81716293 MS.gene81223:CDS
CTTCCCTGACATCATGTCGA+TGG 0.606250 5.2:-81716080 None:intergenic
AAATGTCTAGTTGACCTCAT+GGG 0.606651 5.2:+81718449 MS.gene81223:CDS
AAACTTGAATCAGGACATGT+CGG 0.606659 5.2:+81718187 MS.gene81223:CDS
TTTGCAATCACAGGTGATGA+GGG 0.607181 5.2:+81715167 MS.gene81223:intron
AGCATTCTGGGCATCCTTGG+GGG 0.608710 5.2:+81717044 MS.gene81223:CDS
CAAGTACCTGAAGTTGTCAT+CGG 0.609914 5.2:+81717923 MS.gene81223:CDS
GCCCAAACTGCTCACACGAG+TGG 0.611642 5.2:+81717617 MS.gene81223:CDS
TCCACCGTATGTTCGCGATG+TGG 0.613281 5.2:-81718402 None:intergenic
GTGAACAGAAAAGTTGCAGA+AGG 0.613404 5.2:+81719204 MS.gene81223:CDS
TTTGAGAGGCCACTTACTAG+TGG 0.613971 5.2:+81715860 MS.gene81223:CDS
AGGAAACAGATGGAAAAGCT+GGG 0.614483 5.2:+81718244 MS.gene81223:CDS
TCTTATATCGGTTATAAGCG+AGG 0.615675 5.2:+81717646 MS.gene81223:CDS
CTAGTAACAGTCGAGGACAC+TGG 0.623583 5.2:+81718317 MS.gene81223:CDS
TCCACATCGCGAACATACGG+TGG 0.623794 5.2:+81718401 MS.gene81223:CDS
TATCCATCGACATGATGTCA+GGG 0.623915 5.2:+81716077 MS.gene81223:CDS
GTTACCTGGTCAACTGCGGA+AGG 0.629231 5.2:-81715615 None:intergenic
ATGCGGCTTTGAGCATCGGT+AGG 0.631149 5.2:-81718350 None:intergenic
CTTGTGTCTACATTTCACCA+TGG 0.631262 5.2:+81715585 MS.gene81223:CDS
ACAGCGTATTGAAGCTACTG+TGG 0.633680 5.2:+81716417 MS.gene81223:CDS
TAAATAACCATGCAGAACCA+AGG 0.637583 5.2:-81715437 None:intergenic
GGCAGGCAAACTAGAACTTG+AGG 0.639131 5.2:+81717691 MS.gene81223:CDS
AATGCTGTCCAAGGAAATGG+AGG 0.639265 5.2:-81717027 None:intergenic
AGCCTTACCACCCTCCACAC+AGG 0.641150 5.2:-81719256 None:intergenic
AGAGCAACTCTATACGGCAG+TGG 0.641157 5.2:+81719650 MS.gene81223:CDS
CTACTAAAGTCCAATTACCT+CGG 0.645725 5.2:+81716337 MS.gene81223:CDS
TTCTTCGGACACATTAACTG+TGG 0.646243 5.2:-81714400 None:intergenic
GATATCGTGTAACCTCAGCC+CGG 0.651457 5.2:-81718640 None:intergenic
CATCGACATGATGTCAGGGA+AGG 0.652451 5.2:+81716081 MS.gene81223:CDS
TGTTCAGGCGTAGCATCTGG+AGG 0.656731 5.2:-81716397 None:intergenic
GCATGAAAGGTGTAAATATG+CGG 0.658298 5.2:-81718367 None:intergenic
TGTCTAGTTGACCTCATGGG+AGG 0.658386 5.2:+81718452 MS.gene81223:CDS
ACTGCATCCATGATGTGAAG+TGG 0.660365 5.2:-81718149 None:intergenic
AGCAGTAGTTACCTGTGTGG+AGG 0.662067 5.2:+81719245 MS.gene81223:CDS
GAAAATGGAAACTGAGAACG+AGG 0.669396 5.2:+81715955 MS.gene81223:CDS
ACTTCATCTAGAATTGCATG+TGG 0.670385 5.2:-81717728 None:intergenic
GTAGTTACCTGTGTGGAGGG+TGG 0.673674 5.2:+81719249 MS.gene81223:CDS
CTGCGGAAGGATGTTTACCA+TGG 0.679151 5.2:-81715602 None:intergenic
ACTGGCTTACTACACGTAAG+CGG 0.680944 5.2:+81716867 MS.gene81223:CDS
TAAGCCAGTATCAAGAACAT+CGG 0.681711 5.2:-81716853 None:intergenic
ATCCAATTTCTCCTCCCATG+AGG 0.687075 5.2:-81718463 None:intergenic
TTATACGCAATCAAGAAACA+AGG 0.692490 5.2:+81718919 MS.gene81223:CDS
TTACACGATATCACCTGCAG+AGG 0.694581 5.2:+81718651 MS.gene81223:CDS
TCTCAAACCCTGGAACTCAG+AGG 0.698392 5.2:-81718591 None:intergenic
TCTCTATCAAGCTAAGATCG+AGG 0.707670 5.2:+81717670 MS.gene81223:CDS
TGGAGCAGTAGTTACCTGTG+TGG 0.714398 5.2:+81719242 MS.gene81223:CDS
GTATGTTACCTGGTCAACTG+CGG 0.716416 5.2:-81715619 None:intergenic
CCAACTACTAGTAACAGTCG+AGG 0.735761 5.2:+81718310 MS.gene81223:CDS
AATCCGGTATATGGAGAACG+AGG 0.748717 5.2:+81719464 MS.gene81223:CDS
AGCGTATTGAAGCTACTGTG+GGG 0.753444 5.2:+81716419 MS.gene81223:CDS
CAAATGTAAGTACAACACCG+AGG 0.806793 5.2:-81716354 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAATTTCAATTACATAAA+AGG - chr5.2:81717357-81717376 None:intergenic 10.0%
!!! AATTTATCTAGTTTAATTAA+AGG + chr5.2:81715213-81715232 MS.gene81223:CDS 10.0%
!!! ATTAATTCACTTTTTTATTT+TGG + chr5.2:81715143-81715162 MS.gene81223:intron 10.0%
!!! TTTTAATATTACACATTTTA+AGG + chr5.2:81715743-81715762 MS.gene81223:intron 10.0%
!! AAAGTTTCAAAAGTTAAATT+TGG + chr5.2:81718268-81718287 MS.gene81223:CDS 15.0%
!! ATGTGATATTTCAATTATTT+GGG - chr5.2:81716969-81716988 None:intergenic 15.0%
!! TATGTGATATTTCAATTATT+TGG - chr5.2:81716970-81716989 None:intergenic 15.0%
!!! ATTTTTTTGCATTGTTATAT+AGG + chr5.2:81716249-81716268 MS.gene81223:intron 15.0%
!!! TATCAATAAATTTTCAAGTT+GGG - chr5.2:81719151-81719170 None:intergenic 15.0%
!! AAATATATATCCAAGAAGAA+AGG - chr5.2:81717082-81717101 None:intergenic 20.0%
!! AATTGAAGTGATAAAGTATA+AGG + chr5.2:81715771-81715790 MS.gene81223:intron 20.0%
!! TAAATGAAAAAATTGCTTGT+GGG + chr5.2:81719487-81719506 MS.gene81223:CDS 20.0%
!! TAATAGATAGAAGAAAAATC+CGG + chr5.2:81718621-81718640 MS.gene81223:CDS 20.0%
!! TAATCAAGTTATTAGACTAT+AGG - chr5.2:81715076-81715095 None:intergenic 20.0%
!! TAATCTCATTAAGTTATCAT+TGG - chr5.2:81716454-81716473 None:intergenic 20.0%
!! TATTATAATAACCTAATGTC+CGG - chr5.2:81718800-81718819 None:intergenic 20.0%
!! TTTAATTAAAGGATGTTGTT+TGG + chr5.2:81715224-81715243 MS.gene81223:CDS 20.0%
!!! AAAGTAAAGTATCTAAAGAT+AGG - chr5.2:81717804-81717823 None:intergenic 20.0%
!!! AAGTAAAGTATCTAAAGATA+GGG - chr5.2:81717803-81717822 None:intergenic 20.0%
!!! ATGTCATTATTTTCTCTTAT+TGG + chr5.2:81715645-81715664 MS.gene81223:intron 20.0%
!!! ATTTAAACTACAGAACTTTT+AGG - chr5.2:81714623-81714642 None:intergenic 20.0%
!!! GTATCAATAAATTTTCAAGT+TGG - chr5.2:81719152-81719171 None:intergenic 20.0%
!!! TGTCATTATTTTCTCTTATT+GGG + chr5.2:81715646-81715665 MS.gene81223:intron 20.0%
!!! TTCATATTTAGAGTTATTCA+TGG + chr5.2:81715697-81715716 MS.gene81223:intron 20.0%
!!! TTTACTGGAAATTTTAGAAA+AGG + chr5.2:81718521-81718540 MS.gene81223:CDS 20.0%
! AAACAAGCATCAAAATTATG+TGG - chr5.2:81719303-81719322 None:intergenic 25.0%
! AAATGAAAAAATTGCTTGTG+GGG + chr5.2:81719488-81719507 MS.gene81223:CDS 25.0%
! AACTTGATTATGTAAAGTAG+TGG + chr5.2:81715086-81715105 MS.gene81223:intron 25.0%
! AATAAATCGAATAGCTAAAG+TGG + chr5.2:81717110-81717129 MS.gene81223:CDS 25.0%
! AATAGATAGAAGAAAAATCC+GGG + chr5.2:81718622-81718641 MS.gene81223:CDS 25.0%
! AATGAAGAATGCAAAAAATG+TGG + chr5.2:81719594-81719613 MS.gene81223:CDS 25.0%
! ATGAAGAATGCAAAAAATGT+GGG + chr5.2:81719595-81719614 MS.gene81223:CDS 25.0%
! ATGTAACTAATTAAGTGATG+TGG - chr5.2:81716533-81716552 None:intergenic 25.0%
! CAAATAATTACCAATCTTGT+TGG + chr5.2:81717965-81717984 MS.gene81223:CDS 25.0%
! CAACATTCTTAAAAGAAATG+AGG - chr5.2:81714726-81714745 None:intergenic 25.0%
! GTAAATGAAAAAATTGCTTG+TGG + chr5.2:81719486-81719505 MS.gene81223:CDS 25.0%
! TAAATTGATCTTGCAACATA+CGG - chr5.2:81715530-81715549 None:intergenic 25.0%
! TGAAAAGAATGTTATGATTC+TGG - chr5.2:81714966-81714985 None:intergenic 25.0%
! TGGACTTTAGTAGTTTAAAA+GGG - chr5.2:81716330-81716349 None:intergenic 25.0%
! TGTAAATTAGGATGATTCAT+AGG - chr5.2:81714674-81714693 None:intergenic 25.0%
! TTATAATAGATAATCCCATC+TGG + chr5.2:81717495-81717514 MS.gene81223:intron 25.0%
! TTGGACTTTAGTAGTTTAAA+AGG - chr5.2:81716331-81716350 None:intergenic 25.0%
! TTTCAGTTCATTCACAATAA+AGG + chr5.2:81718083-81718102 MS.gene81223:intron 25.0%
!! ATCTCAGGTTAGATATATTT+TGG + chr5.2:81717194-81717213 MS.gene81223:intron 25.0%
!! ATTGATACACAAACGAATTT+TGG + chr5.2:81719164-81719183 MS.gene81223:CDS 25.0%
!! CAAGATTGGTAATTATTTGT+CGG - chr5.2:81717964-81717983 None:intergenic 25.0%
!! CTGTTTTCAAATAATTTTCC+AGG + chr5.2:81717542-81717561 MS.gene81223:intron 25.0%
!! GTCATTATTTTCTCTTATTG+GGG + chr5.2:81715647-81715666 MS.gene81223:intron 25.0%
!! TCTCAGGTTAGATATATTTT+GGG + chr5.2:81717195-81717214 MS.gene81223:intron 25.0%
!! TTATGTTCTCTATACCTTTT+TGG + chr5.2:81717869-81717888 MS.gene81223:intron 25.0%
!! TTTTGTAACTCCAAATTCTT+CGG - chr5.2:81714418-81714437 None:intergenic 25.0%
!! TTTTTGCATTGTTATATAGG+AGG + chr5.2:81716252-81716271 MS.gene81223:intron 25.0%
!!! AGGTAATGTGTTAGTTTTTT+TGG + chr5.2:81718746-81718765 MS.gene81223:intron 25.0%
!!! ATTCTGGTTTACAAATTCAA+AGG - chr5.2:81714950-81714969 None:intergenic 25.0%
!!! CTAGTTATTTTTATGTCAGT+TGG + chr5.2:81715411-81715430 MS.gene81223:CDS 25.0%
!!! TAATTTTGATGCTTGTTTCA+TGG + chr5.2:81719305-81719324 MS.gene81223:CDS 25.0%
!!! TATATTTCCATTTTTTTGCC+AGG + chr5.2:81716992-81717011 MS.gene81223:intron 25.0%
!!! TTTAAATTGTTGATTCTGCT+TGG + chr5.2:81714636-81714655 MS.gene81223:intron 25.0%
!!! TTTGTTATTACCTTTCTTCT+TGG + chr5.2:81717069-81717088 MS.gene81223:CDS 25.0%
AAAATTCAGATCAGTTGTAC+CGG + chr5.2:81718778-81718797 MS.gene81223:intron 30.0%
AAAGAGAAACTAATCCTTTG+AGG - chr5.2:81717393-81717412 None:intergenic 30.0%
AAATTGATCTTGCAACATAC+GGG - chr5.2:81715529-81715548 None:intergenic 30.0%
AATCTTCAAACTTCTAGCAA+GGG - chr5.2:81714927-81714946 None:intergenic 30.0%
AATGTTACATATGCTTTCCA+AGG - chr5.2:81714523-81714542 None:intergenic 30.0%
AGAATGCTTAAACTTGAATC+AGG + chr5.2:81718178-81718197 MS.gene81223:CDS 30.0%
AGAATGTATTCCAGAAAACT+TGG + chr5.2:81715988-81716007 MS.gene81223:CDS 30.0%
AGATTCAGATGAAATAAGCT+TGG + chr5.2:81716166-81716185 MS.gene81223:intron 30.0%
ATCCTTGTCTATAAGAATCA+TGG - chr5.2:81718875-81718894 None:intergenic 30.0%
ATGTTACATATGCTTTCCAA+GGG - chr5.2:81714522-81714541 None:intergenic 30.0%
CATTAAATTGCTCACATATC+AGG + chr5.2:81716211-81716230 MS.gene81223:intron 30.0%
CTTCAAATGTTGTTAAGTAG+TGG + chr5.2:81714364-81714383 MS.gene81223:CDS 30.0%
GAACAAAGTCATCAAGAATT+GGG - chr5.2:81714477-81714496 None:intergenic 30.0%
GACATTGTAAAAATACTCCA+CGG - chr5.2:81716564-81716583 None:intergenic 30.0%
GAGTGGTAAAGATCTTATAT+CGG + chr5.2:81717634-81717653 MS.gene81223:CDS 30.0%
GGACTTTAGTAGTTTAAAAG+GGG - chr5.2:81716329-81716348 None:intergenic 30.0%
GGTCAATCACTATGTAAATT+AGG - chr5.2:81714686-81714705 None:intergenic 30.0%
GTTTGACTGCAGAAAATATT+TGG + chr5.2:81715815-81715834 MS.gene81223:intron 30.0%
TCTTATAGACAAGGATTCTT+GGG + chr5.2:81718879-81718898 MS.gene81223:CDS 30.0%
TGAACAAAGTCATCAAGAAT+TGG - chr5.2:81714478-81714497 None:intergenic 30.0%
TGGTTGGACAATTAAGAAAA+TGG + chr5.2:81715940-81715959 MS.gene81223:CDS 30.0%
TTACAAATGCATGTGATACA+CGG - chr5.2:81716618-81716637 None:intergenic 30.0%
TTACCTAAAACACCATTCAT+TGG - chr5.2:81717455-81717474 None:intergenic 30.0%
TTATACGCAATCAAGAAACA+AGG + chr5.2:81718919-81718938 MS.gene81223:CDS 30.0%
TTCTTATAGACAAGGATTCT+TGG + chr5.2:81718878-81718897 MS.gene81223:CDS 30.0%
! CTCAGGTTAGATATATTTTG+GGG + chr5.2:81717196-81717215 MS.gene81223:intron 30.0%
! GAAGAATTTGGAGTTACAAA+AGG + chr5.2:81714417-81714436 MS.gene81223:CDS 30.0%
! TGTCCAATTGTATTGATGAA+AGG + chr5.2:81714338-81714357 MS.gene81223:CDS 30.0%
! TGTTTGGTAACATTTCTTAC+TGG + chr5.2:81719526-81719545 MS.gene81223:CDS 30.0%
! TTGGAAAGCATATGTAACAT+TGG + chr5.2:81714522-81714541 MS.gene81223:CDS 30.0%
! TTTTTACAATGTCGGTGTAT+TGG + chr5.2:81716571-81716590 MS.gene81223:intron 30.0%
!! GAAAAAGTACTTCCAATTTC+AGG - chr5.2:81718500-81718519 None:intergenic 30.0%
!! GTGGAGTATTTTTACAATGT+CGG + chr5.2:81716563-81716582 MS.gene81223:intron 30.0%
!!! GGAAGTACTTTTTCATTTAC+TGG + chr5.2:81718506-81718525 MS.gene81223:CDS 30.0%
!!! TATTTTGGTTTTGCAATCAC+AGG + chr5.2:81715158-81715177 MS.gene81223:intron 30.0%
AAAAGGAGAAACAGAATCTG+TGG + chr5.2:81718538-81718557 MS.gene81223:CDS 35.0%
AAACTTGAATCAGGACATGT+CGG + chr5.2:81718187-81718206 MS.gene81223:CDS 35.0%
AAATGTCTAGTTGACCTCAT+GGG + chr5.2:81718449-81718468 MS.gene81223:CDS 35.0%
AAGCGAATTTCCAACAAGAT+TGG - chr5.2:81717978-81717997 None:intergenic 35.0%
AAGGAAGAATCAAAAGCAGA+AGG + chr5.2:81715296-81715315 MS.gene81223:CDS 35.0%
AATCCATCTGATTGTCATCA+AGG - chr5.2:81717595-81717614 None:intergenic 35.0%
AATCCTAACATTCTTGCCAT+CGG - chr5.2:81717255-81717274 None:intergenic 35.0%
AGAACATGCAATACATTGAG+TGG + chr5.2:81718212-81718231 MS.gene81223:CDS 35.0%
AGAATGCAAAAAATGTGGGA+TGG + chr5.2:81719599-81719618 MS.gene81223:CDS 35.0%
AGTCGTATTTGCTCAAGAAA+CGG + chr5.2:81716042-81716061 MS.gene81223:CDS 35.0%
ATCAAAACACTTTGCCAAAG+AGG - chr5.2:81719069-81719088 None:intergenic 35.0%
ATCAAGAAACAAGGACAGAA+TGG + chr5.2:81718928-81718947 MS.gene81223:CDS 35.0%
ATGACATTGAGTATGTTACC+TGG - chr5.2:81715632-81715651 None:intergenic 35.0%
ATGTACTAATGAAGCCTCTT+TGG + chr5.2:81719052-81719071 MS.gene81223:CDS 35.0%
ATTAATTACCCGTCCATTTC+TGG - chr5.2:81719342-81719361 None:intergenic 35.0%
ATTGGATGTAATGTGTGTGT+TGG + chr5.2:81716589-81716608 MS.gene81223:intron 35.0%
CAAAATGCATCCTATCAGAA+TGG - chr5.2:81715910-81715929 None:intergenic 35.0%
CAAGCATCAAAATTATGTGG+TGG - chr5.2:81719300-81719319 None:intergenic 35.0%
CATATTTACACCTTTCATGC+AGG + chr5.2:81718370-81718389 MS.gene81223:CDS 35.0%
CCTCCTTTCATCAATACAAT+TGG - chr5.2:81714344-81714363 None:intergenic 35.0%
CTACTAAAGTCCAATTACCT+CGG + chr5.2:81716337-81716356 MS.gene81223:CDS 35.0%
GAATCTTCAAACTTCTAGCA+AGG - chr5.2:81714928-81714947 None:intergenic 35.0%
GAGCAAAACGTTAACCAAAT+CGG - chr5.2:81714563-81714582 None:intergenic 35.0%
GAGGCATATAAGATGTCTAA+AGG - chr5.2:81714707-81714726 None:intergenic 35.0%
GGTGCATATTCATCTTGAAT+GGG - chr5.2:81716022-81716041 None:intergenic 35.0%
GTAAAAACTCTACCTTTCCA+CGG - chr5.2:81714585-81714604 None:intergenic 35.0%
GTTAATGTGTCCGAAGAATT+TGG + chr5.2:81714405-81714424 MS.gene81223:CDS 35.0%
GTTGTTATCCATGTATTGGA+AGG + chr5.2:81716700-81716719 MS.gene81223:intron 35.0%
TAAATAACCATGCAGAACCA+AGG - chr5.2:81715440-81715459 None:intergenic 35.0%
TAAATGTCTAGTTGACCTCA+TGG + chr5.2:81718448-81718467 MS.gene81223:CDS 35.0%
TAAGCCAGTATCAAGAACAT+CGG - chr5.2:81716856-81716875 None:intergenic 35.0%
TAATTCTCTCTTGACCTCAA+AGG + chr5.2:81717376-81717395 MS.gene81223:intron 35.0%
TAGAGTTGCTCTTCTTCAAA+TGG - chr5.2:81719642-81719661 None:intergenic 35.0%
TATACACTGTCACTGTAAAG+AGG - chr5.2:81716643-81716662 None:intergenic 35.0%
TCAAAAGCAGAAGGTAGTTA+AGG + chr5.2:81715305-81715324 MS.gene81223:CDS 35.0%
TCTGAAAAGTCCGATGAAAA+AGG + chr5.2:81717764-81717783 MS.gene81223:CDS 35.0%
TCTGATCCTATTACGATGTA+TGG + chr5.2:81716828-81716847 MS.gene81223:CDS 35.0%
TCTTGTTGGAAATTCGCTTA+AGG + chr5.2:81717979-81717998 MS.gene81223:CDS 35.0%
TGAAAGTTCTCCATTCTGAT+AGG + chr5.2:81715897-81715916 MS.gene81223:CDS 35.0%
TGAAGAAGAGCAACTCTATA+CGG + chr5.2:81719644-81719663 MS.gene81223:CDS 35.0%
TGACGACTGTCAATAACATA+AGG - chr5.2:81716133-81716152 None:intergenic 35.0%
TGATTCTGCTTGGAATTTGT+TGG + chr5.2:81714646-81714665 MS.gene81223:intron 35.0%
TGCAACAAAATTGTTTCCGA+TGG + chr5.2:81717236-81717255 MS.gene81223:intron 35.0%
TGGAGAATATACAGAGAGTT+CGG + chr5.2:81715835-81715854 MS.gene81223:CDS 35.0%
TGGTGCATATTCATCTTGAA+TGG - chr5.2:81716023-81716042 None:intergenic 35.0%
TTGTAAAAATACTCCACGGT+AGG - chr5.2:81716560-81716579 None:intergenic 35.0%
TTTATGTCAGTTGGAATCCT+TGG + chr5.2:81715420-81715439 MS.gene81223:CDS 35.0%
TTTCTGATACTTGCAACTCA+AGG + chr5.2:81718726-81718745 MS.gene81223:CDS 35.0%
TTTGTAAGTGAGCCTGAAAT+TGG + chr5.2:81718485-81718504 MS.gene81223:CDS 35.0%
TTTGTACCCTCCAATTATCT+CGG + chr5.2:81717826-81717845 MS.gene81223:intron 35.0%
! ACTCCAATGAATGGTGTTTT+AGG + chr5.2:81717449-81717468 MS.gene81223:CDS 35.0%
! ACTTCATCTAGAATTGCATG+TGG - chr5.2:81717731-81717750 None:intergenic 35.0%
! CCAATTGTATTGATGAAAGG+AGG + chr5.2:81714341-81714360 MS.gene81223:CDS 35.0%
! CTTTCCAAAGATTTTTCTCC+TGG + chr5.2:81718972-81718991 MS.gene81223:CDS 35.0%
! GATACACAAACGAATTTTGG+TGG + chr5.2:81719167-81719186 MS.gene81223:CDS 35.0%
! GCATGAAAGGTGTAAATATG+CGG - chr5.2:81718370-81718389 None:intergenic 35.0%
! GTGTGTTGTTATCCATGTAT+TGG + chr5.2:81716696-81716715 MS.gene81223:intron 35.0%
! TCTTACATGTTGCAGTTTTG+AGG + chr5.2:81719431-81719450 MS.gene81223:intron 35.0%
! TCTTATATCGGTTATAAGCG+AGG + chr5.2:81717646-81717665 MS.gene81223:CDS 35.0%
! TGAGAATATTTTGCGAGCAA+GGG + chr5.2:81716279-81716298 MS.gene81223:CDS 35.0%
! TGGTTGGTATACTGTAAAAC+AGG - chr5.2:81714822-81714841 None:intergenic 35.0%
! TTCTAGCAAGGGCATAAAAA+TGG - chr5.2:81714916-81714935 None:intergenic 35.0%
!! ATTATTTGTCGGAAGCGTTT+AGG - chr5.2:81717953-81717972 None:intergenic 35.0%
!! CACCTCAATTCCTTTTTCAT+CGG - chr5.2:81717777-81717796 None:intergenic 35.0%
!! TGTTTTTGTCTCGATTCATC+TGG + chr5.2:81718109-81718128 MS.gene81223:CDS 35.0%
!! TTGGTTCTGCATGGTTATTT+AGG + chr5.2:81715439-81715458 MS.gene81223:CDS 35.0%
!!! TGTCTGGCTTTTGTTTACTA+AGG + chr5.2:81715277-81715296 MS.gene81223:CDS 35.0%
AAAGCAAGCAGATTGAAGAC+TGG - chr5.2:81718702-81718721 None:intergenic 40.0%
AACAAAAGCCAGACAACTTG+TGG - chr5.2:81715272-81715291 None:intergenic 40.0%
AAGTACAACACCGAGGTAAT+TGG - chr5.2:81716350-81716369 None:intergenic 40.0%
AATTGCTTGTGGGGAAGAAT+TGG + chr5.2:81719497-81719516 MS.gene81223:CDS 40.0%
ACAAAAGCCAGACAACTTGT+GGG - chr5.2:81715271-81715290 None:intergenic 40.0%
ACCAGTAGTAATGCATCGTA+TGG + chr5.2:81714877-81714896 MS.gene81223:intron 40.0%
AGACTGAATGCCGAGATAAT+TGG - chr5.2:81717839-81717858 None:intergenic 40.0%
AGCTTGGATTATCATTCCCT+TGG + chr5.2:81714503-81714522 MS.gene81223:CDS 40.0%
AGGAAACAGATGGAAAAGCT+GGG + chr5.2:81718244-81718263 MS.gene81223:CDS 40.0%
AGGTATGCTGCAAATGTTGA+TGG + chr5.2:81717562-81717581 MS.gene81223:intron 40.0%
ATCAACATTTGCAGCATACC+TGG - chr5.2:81717563-81717582 None:intergenic 40.0%
ATGGCAGAAGAATAACCCTT+TGG + chr5.2:81718568-81718587 MS.gene81223:CDS 40.0%
ATTTCCTTGGACAGCATTCT+GGG + chr5.2:81717032-81717051 MS.gene81223:CDS 40.0%
CAAATGTAAGTACAACACCG+AGG - chr5.2:81716357-81716376 None:intergenic 40.0%
CAAGTACCTGAAGTTGTCAT+CGG + chr5.2:81717923-81717942 MS.gene81223:CDS 40.0%
CAGAATCTGTGGATGAGAAA+TGG + chr5.2:81718549-81718568 MS.gene81223:CDS 40.0%
CCAACAAGTGTTTACCAGAT+GGG - chr5.2:81717512-81717531 None:intergenic 40.0%
CCAACTGTACTCAACCAAAA+AGG - chr5.2:81717886-81717905 None:intergenic 40.0%
CTATGATGTTCCATCACTTG+TGG + chr5.2:81716737-81716756 MS.gene81223:CDS 40.0%
CTTGTGTCTACATTTCACCA+TGG + chr5.2:81715585-81715604 MS.gene81223:CDS 40.0%
GAAAATGGAAACTGAGAACG+AGG + chr5.2:81715955-81715974 MS.gene81223:CDS 40.0%
GAAGAATTGGCAGAGATGTT+TGG + chr5.2:81719510-81719529 MS.gene81223:CDS 40.0%
GACTTTGTTCACATGAAGCT+TGG + chr5.2:81714487-81714506 MS.gene81223:CDS 40.0%
GATTTCCTGTAGGAAACAGA+TGG + chr5.2:81718234-81718253 MS.gene81223:CDS 40.0%
GCTTGAACCTGGCAAAAAAA+TGG - chr5.2:81717002-81717021 None:intergenic 40.0%
GGCCATGATTCTTATAGACA+AGG + chr5.2:81718870-81718889 MS.gene81223:CDS 40.0%
GGGACAGTATAATGCCAATA+AGG - chr5.2:81715251-81715270 None:intergenic 40.0%
GGTAATAACAAATACCCCCA+AGG - chr5.2:81717061-81717080 None:intergenic 40.0%
GTCATACACATTGACAGCAA+TGG - chr5.2:81716796-81716815 None:intergenic 40.0%
GTCCGATGAAAAAGGAATTG+AGG + chr5.2:81717772-81717791 MS.gene81223:CDS 40.0%
GTGAACAGAAAAGTTGCAGA+AGG + chr5.2:81719204-81719223 MS.gene81223:CDS 40.0%
GTTTCTTGAGCAAATACGAC+TGG - chr5.2:81716043-81716062 None:intergenic 40.0%
TAAGCAACACCACTAGTAAG+TGG - chr5.2:81715872-81715891 None:intergenic 40.0%
TAGGAAACAGATGGAAAAGC+TGG + chr5.2:81718243-81718262 MS.gene81223:CDS 40.0%
TAGTTACATTCATCCTACCG+TGG + chr5.2:81716544-81716563 MS.gene81223:intron 40.0%
TATCCATCGACATGATGTCA+GGG + chr5.2:81716077-81716096 MS.gene81223:CDS 40.0%
TCAGCTGTCATAGCTAGTAT+TGG - chr5.2:81719558-81719577 None:intergenic 40.0%
TCCATACGATGCATTACTAC+TGG - chr5.2:81714881-81714900 None:intergenic 40.0%
TCGGTACCATACATCGTAAT+AGG - chr5.2:81716837-81716856 None:intergenic 40.0%
TCTCTATCAAGCTAAGATCG+AGG + chr5.2:81717670-81717689 MS.gene81223:CDS 40.0%
TGAATGCCGAGATAATTGGA+GGG - chr5.2:81717835-81717854 None:intergenic 40.0%
TTACCTCGTTCTCCATATAC+CGG - chr5.2:81719470-81719489 None:intergenic 40.0%
TTACTAATGCTCTCAAACCC+TGG - chr5.2:81718604-81718623 None:intergenic 40.0%
TTCTTCGGACACATTAACTG+TGG - chr5.2:81714403-81714422 None:intergenic 40.0%
TTTCCGATGGCAAGAATGTT+AGG + chr5.2:81717249-81717268 MS.gene81223:intron 40.0%
TTTGCAATCACAGGTGATGA+GGG + chr5.2:81715167-81715186 MS.gene81223:intron 40.0%
! ACATTGAGTGGATTTCCTGT+AGG + chr5.2:81718224-81718243 MS.gene81223:CDS 40.0%
! ACGTAAGCGGTCTAGATTTT+GGG + chr5.2:81716880-81716899 MS.gene81223:CDS 40.0%
! ACTTTGAGTTTGTCGAAGCT+CGG + chr5.2:81714843-81714862 MS.gene81223:intron 40.0%
! CACAAGTGATGGAACATCAT+AGG - chr5.2:81716739-81716758 None:intergenic 40.0%
! CTTTTCCATCTGTTTCCTAC+AGG - chr5.2:81718242-81718261 None:intergenic 40.0%
! GGATGTTGTTTGGTCCTTAT+TGG + chr5.2:81715234-81715253 MS.gene81223:CDS 40.0%
! GTGAGAATATTTTGCGAGCA+AGG + chr5.2:81716278-81716297 MS.gene81223:CDS 40.0%
! TGACCTTGATGACAATCAGA+TGG + chr5.2:81717589-81717608 MS.gene81223:CDS 40.0%
! TGCATCTCATGTTTTCGTAG+TGG - chr5.2:81716909-81716928 None:intergenic 40.0%
! TTGTTTTCTCCCAGTTCCAA+GGG - chr5.2:81719109-81719128 None:intergenic 40.0%
! TTTAGCTCCTTCTGCTCATT+GGG - chr5.2:81719012-81719031 None:intergenic 40.0%
! TTTTGCAATCACAGGTGATG+AGG + chr5.2:81715166-81715185 MS.gene81223:intron 40.0%
!! AAATATGCGGCTTTGAGCAT+CGG - chr5.2:81718357-81718376 None:intergenic 40.0%
!! ATCATCTCTTTTAGCTGCTG+CGG + chr5.2:81718025-81718044 MS.gene81223:intron 40.0%
!! ATGCATTTTGAGAAGCAGCA+TGG + chr5.2:81715920-81715939 MS.gene81223:CDS 40.0%
!! ATTTTGAGAAGCAGCATGGT+TGG + chr5.2:81715924-81715943 MS.gene81223:CDS 40.0%
!! CAATGTTGAATCCGCTTTTG+TGG - chr5.2:81715345-81715364 None:intergenic 40.0%
!! CCATGTATTGGAAGGTATCT+GGG + chr5.2:81716708-81716727 MS.gene81223:intron 40.0%
!! GAAGGTGTTCTGCGAAAATA+TGG + chr5.2:81719222-81719241 MS.gene81223:CDS 40.0%
!! TCCATGTATTGGAAGGTATC+TGG + chr5.2:81716707-81716726 MS.gene81223:intron 40.0%
!! TTTGTTTTCTCCCAGTTCCA+AGG - chr5.2:81719110-81719129 None:intergenic 40.0%
!!! CCTTTTTGGTTGAGTACAGT+TGG + chr5.2:81717883-81717902 MS.gene81223:intron 40.0%
AATATGAACTAGCAGACCCG+AGG - chr5.2:81715678-81715697 None:intergenic 45.0%
AATCCGGTATATGGAGAACG+AGG + chr5.2:81719464-81719483 MS.gene81223:CDS 45.0%
AATGCTGTCCAAGGAAATGG+AGG - chr5.2:81717030-81717049 None:intergenic 45.0%
ACACAAGAATAGCGAGAGCA+TGG - chr5.2:81715572-81715591 None:intergenic 45.0%
ACAGAGAATCCCTTGGAACT+GGG + chr5.2:81719097-81719116 MS.gene81223:CDS 45.0%
ACAGCGTATTGAAGCTACTG+TGG + chr5.2:81716417-81716436 MS.gene81223:CDS 45.0%
ACATACGGTGGAACTGGAAT+AGG + chr5.2:81718413-81718432 MS.gene81223:CDS 45.0%
ACCAGTAGCCTTTGAATGAC+CGG - chr5.2:81715373-81715392 None:intergenic 45.0%
ACTGCATCCATGATGTGAAG+TGG - chr5.2:81718152-81718171 None:intergenic 45.0%
AGAAGCTTGTCCACAAGTGA+TGG - chr5.2:81716750-81716769 None:intergenic 45.0%
AGACAAGGATTCTTGGGACA+AGG + chr5.2:81718885-81718904 MS.gene81223:CDS 45.0%
AGCATATGCCTCCATTTCCT+TGG + chr5.2:81717019-81717038 MS.gene81223:CDS 45.0%
AGCGTATTGAAGCTACTGTG+GGG + chr5.2:81716419-81716438 MS.gene81223:CDS 45.0%
AGTTCCACATCGCGAACATA+CGG + chr5.2:81718398-81718417 MS.gene81223:CDS 45.0%
ATACTGTCCCACAAGTTGTC+TGG + chr5.2:81715261-81715280 MS.gene81223:CDS 45.0%
ATCCAATTTCTCCTCCCATG+AGG - chr5.2:81718466-81718485 None:intergenic 45.0%
CAGAAGGAGCTAAAGTCAGT+TGG + chr5.2:81719018-81719037 MS.gene81223:CDS 45.0%
CAGAATGCTGTCCAAGGAAA+TGG - chr5.2:81717033-81717052 None:intergenic 45.0%
CAGCGTATTGAAGCTACTGT+GGG + chr5.2:81716418-81716437 MS.gene81223:CDS 45.0%
CATTCAACTCCACACCAATG+TGG - chr5.2:81714764-81714783 None:intergenic 45.0%
CATTTCCTTGGACAGCATTC+TGG + chr5.2:81717031-81717050 MS.gene81223:CDS 45.0%
CCCAGATACCTTCCAATACA+TGG - chr5.2:81716711-81716730 None:intergenic 45.0%
CCCATCTGGTAAACACTTGT+TGG + chr5.2:81717509-81717528 MS.gene81223:intron 45.0%
CGACAAACTCAAAGTGTGGT+TGG - chr5.2:81714838-81714857 None:intergenic 45.0%
CGACAGTTTCACATGAGATC+AGG + chr5.2:81717426-81717445 MS.gene81223:CDS 45.0%
CGATGACAACTTCAGGTACT+TGG - chr5.2:81717925-81717944 None:intergenic 45.0%
CGGATTCAACATTGTATGCC+CGG + chr5.2:81715351-81715370 MS.gene81223:CDS 45.0%
CTCCAAATGCCAGAAATGGA+CGG + chr5.2:81719330-81719349 MS.gene81223:CDS 45.0%
CTGAATGCCGAGATAATTGG+AGG - chr5.2:81717836-81717855 None:intergenic 45.0%
GAAAACATGAGATGCACTGC+AGG + chr5.2:81716913-81716932 MS.gene81223:CDS 45.0%
GAACTATCAGCCTGCATGAA+AGG - chr5.2:81718383-81718402 None:intergenic 45.0%
GAAGAGTCCACTTCACATCA+TGG + chr5.2:81718142-81718161 MS.gene81223:CDS 45.0%
GACTAGGCTAATCCGGTATA+TGG + chr5.2:81719455-81719474 MS.gene81223:CDS 45.0%
GAGATCAGGACTCCAATGAA+TGG + chr5.2:81717440-81717459 MS.gene81223:CDS 45.0%
GATCAGTTGTACCGGACATT+AGG + chr5.2:81718786-81718805 MS.gene81223:intron 45.0%
GCCAACAAGTGTTTACCAGA+TGG - chr5.2:81717513-81717532 None:intergenic 45.0%
GCTTCGACAAACTCAAAGTG+TGG - chr5.2:81714842-81714861 None:intergenic 45.0%
GGATCTCCAAATGCCAGAAA+TGG + chr5.2:81719326-81719345 MS.gene81223:CDS 45.0%
GTAGCTTCAATACGCTGTTC+AGG - chr5.2:81716415-81716434 None:intergenic 45.0%
GTATCCATCGACATGATGTC+AGG + chr5.2:81716076-81716095 MS.gene81223:CDS 45.0%
GTATGTTACCTGGTCAACTG+CGG - chr5.2:81715622-81715641 None:intergenic 45.0%
GTCATTCAAAGGCTACTGGT+TGG + chr5.2:81715373-81715392 MS.gene81223:CDS 45.0%
GTGATGTGGCAACACATCAT+AGG - chr5.2:81716519-81716538 None:intergenic 45.0%
GTGCATGTTTGCTTCCACAT+TGG + chr5.2:81714747-81714766 MS.gene81223:intron 45.0%
GTGGCCAGGAGAAAAATCTT+TGG - chr5.2:81718979-81718998 None:intergenic 45.0%
GTGTGATAGCAAGCTAAGAG+AGG - chr5.2:81716111-81716130 None:intergenic 45.0%
TACAGAGAATCCCTTGGAAC+TGG + chr5.2:81719096-81719115 MS.gene81223:CDS 45.0%
TAGAAGAAAAATCCGGGCTG+AGG + chr5.2:81718628-81718647 MS.gene81223:CDS 45.0%
TATCAAGCTAAGATCGAGGC+AGG + chr5.2:81717674-81717693 MS.gene81223:CDS 45.0%
TATTCATCTTGAATGGGCGC+TGG - chr5.2:81716016-81716035 None:intergenic 45.0%
TCCAAATGCCAGAAATGGAC+GGG + chr5.2:81719331-81719350 MS.gene81223:CDS 45.0%
TGCAGATGTCGCAAAATCTC+AGG + chr5.2:81717179-81717198 MS.gene81223:CDS 45.0%
TGTTTGCTTCCACATTGGTG+TGG + chr5.2:81714752-81714771 MS.gene81223:intron 45.0%
TTACACGATATCACCTGCAG+AGG + chr5.2:81718651-81718670 MS.gene81223:CDS 45.0%
TTAGCTCCTTCTGCTCATTG+GGG - chr5.2:81719011-81719030 None:intergenic 45.0%
TTGAGGTGACTAGGCTAATC+CGG + chr5.2:81719448-81719467 MS.gene81223:CDS 45.0%
TTGGTGTGGAGTTGAATGTG+CGG + chr5.2:81714766-81714785 MS.gene81223:intron 45.0%
TTGTATGCCCGGTCATTCAA+AGG + chr5.2:81715362-81715381 MS.gene81223:CDS 45.0%
TTTCAGTATGTCGACGCAGT+TGG + chr5.2:81718849-81718868 MS.gene81223:intron 45.0%
TTTGAGAGGCCACTTACTAG+TGG + chr5.2:81715860-81715879 MS.gene81223:CDS 45.0%
! ACTGGCTTACTACACGTAAG+CGG + chr5.2:81716867-81716886 MS.gene81223:CDS 45.0%
! ATTCAAAGGCTACTGGTTGG+CGG + chr5.2:81715376-81715395 MS.gene81223:CDS 45.0%
! CACGTAAGCGGTCTAGATTT+TGG + chr5.2:81716879-81716898 MS.gene81223:CDS 45.0%
! CGTAAGCGGTCTAGATTTTG+GGG + chr5.2:81716881-81716900 MS.gene81223:CDS 45.0%
! CTCTGCACTTTTGTCCGATT+TGG + chr5.2:81714546-81714565 MS.gene81223:CDS 45.0%
! CTTTAGCTCCTTCTGCTCAT+TGG - chr5.2:81719013-81719032 None:intergenic 45.0%
! GCGTCGACATACTGAAAGAA+TGG - chr5.2:81718846-81718865 None:intergenic 45.0%
! TAACGTTTTGCTCCGTGGAA+AGG + chr5.2:81714570-81714589 MS.gene81223:CDS 45.0%
! TTGGTTAACGTTTTGCTCCG+TGG + chr5.2:81714565-81714584 MS.gene81223:CDS 45.0%
!! CTCTTATTGGGGTATTGCCT+CGG + chr5.2:81715658-81715677 MS.gene81223:intron 45.0%
!! GGTACCGATGTTCTTGATAC+TGG + chr5.2:81716849-81716868 MS.gene81223:CDS 45.0%
!! TCTTATTGGGGTATTGCCTC+GGG + chr5.2:81715659-81715678 MS.gene81223:intron 45.0%
!! TTGGAATCCTTGGTTCTGCA+TGG + chr5.2:81715430-81715449 MS.gene81223:CDS 45.0%
!!! GTTGCAGTTTTGAGGTGACT+AGG + chr5.2:81719439-81719458 MS.gene81223:intron 45.0%
ACAGCATTCTGGGCATCCTT+GGG + chr5.2:81717042-81717061 MS.gene81223:CDS 50.0%
ACCACTCGTGTGAGCAGTTT+GGG - chr5.2:81717621-81717640 None:intergenic 50.0%
ACGATATCACCTGCAGAGGT+TGG + chr5.2:81718655-81718674 MS.gene81223:CDS 50.0%
AGAGCAACTCTATACGGCAG+TGG + chr5.2:81719650-81719669 MS.gene81223:CDS 50.0%
AGCAGTAGTTACCTGTGTGG+AGG + chr5.2:81719245-81719264 MS.gene81223:CDS 50.0%
ATCCACCTGCTCCACAAAAG+CGG + chr5.2:81715331-81715350 MS.gene81223:CDS 50.0%
CAAGGACAGAATGGCGTCAA+AGG + chr5.2:81718937-81718956 MS.gene81223:CDS 50.0%
CAGAGAGTTCGGCATTTGAG+AGG + chr5.2:81715846-81715865 MS.gene81223:CDS 50.0%
CATCGACATGATGTCAGGGA+AGG + chr5.2:81716081-81716100 MS.gene81223:CDS 50.0%
CCAGTAGCCTTTGAATGACC+GGG - chr5.2:81715372-81715391 None:intergenic 50.0%
CGATATCACCTGCAGAGGTT+GGG + chr5.2:81718656-81718675 MS.gene81223:CDS 50.0%
CGCAACTACAGAGAATCCCT+TGG + chr5.2:81719090-81719109 MS.gene81223:CDS 50.0%
CTGCGGAAGGATGTTTACCA+TGG - chr5.2:81715605-81715624 None:intergenic 50.0%
CTTCCCTGACATCATGTCGA+TGG - chr5.2:81716083-81716102 None:intergenic 50.0%
GACCTCATGGGAGGAGAAAT+TGG + chr5.2:81718461-81718480 MS.gene81223:CDS 50.0%
GATATCGTGTAACCTCAGCC+CGG - chr5.2:81718643-81718662 None:intergenic 50.0%
GCAGTAGTTACCTGTGTGGA+GGG + chr5.2:81719246-81719265 MS.gene81223:CDS 50.0%
GGCAGGCAAACTAGAACTTG+AGG + chr5.2:81717691-81717710 MS.gene81223:CDS 50.0%
GGCTCTCTCATCACACATAG+TGG - chr5.2:81715508-81715527 None:intergenic 50.0%
TACCACTCGTGTGAGCAGTT+TGG - chr5.2:81717622-81717641 None:intergenic 50.0%
TCTCAAACCCTGGAACTCAG+AGG - chr5.2:81718594-81718613 None:intergenic 50.0%
TGGAGCAGTAGTTACCTGTG+TGG + chr5.2:81719242-81719261 MS.gene81223:CDS 50.0%
TGTCTAGTTGACCTCATGGG+AGG + chr5.2:81718452-81718471 MS.gene81223:CDS 50.0%
! GAATAGCGAGAGCATGGACA+TGG - chr5.2:81715566-81715585 None:intergenic 50.0%
! TGGAGGCATATGCTTGAACC+TGG - chr5.2:81717013-81717032 None:intergenic 50.0%
!! ACCCGTCCATTTCTGGCATT+TGG - chr5.2:81719335-81719354 None:intergenic 50.0%
!! GACAGCAATGGTTTGCTGAC+AGG - chr5.2:81716784-81716803 None:intergenic 50.0%
!! TGAATCCGCTTTTGTGGAGC+AGG - chr5.2:81715339-81715358 None:intergenic 50.0%
!!! ATTTTGCGAGCAAGGGCATC+TGG + chr5.2:81716286-81716305 MS.gene81223:CDS 50.0%
ACATCCTTCCGCAGTTGACC+AGG + chr5.2:81715611-81715630 MS.gene81223:CDS 55.0%
AGCATTCTGGGCATCCTTGG+GGG + chr5.2:81717044-81717063 MS.gene81223:CDS 55.0%
CAGCATTCTGGGCATCCTTG+GGG + chr5.2:81717043-81717062 MS.gene81223:CDS 55.0%
CCCGGTCATTCAAAGGCTAC+TGG + chr5.2:81715369-81715388 MS.gene81223:CDS 55.0%
CCTGGAACTCAGAGGCCAAA+GGG - chr5.2:81718586-81718605 None:intergenic 55.0%
CCTTAGCCCCAATGAGCAGA+AGG + chr5.2:81719002-81719021 MS.gene81223:CDS 55.0%
CCTTCTGCTCATTGGGGCTA+AGG - chr5.2:81719005-81719024 None:intergenic 55.0%
CCTTTGGCCTCTGAGTTCCA+GGG + chr5.2:81718584-81718603 MS.gene81223:CDS 55.0%
CTGCTCATTGGGGCTAAGGT+GGG - chr5.2:81719001-81719020 None:intergenic 55.0%
GACAGCATTCTGGGCATCCT+TGG + chr5.2:81717041-81717060 MS.gene81223:CDS 55.0%
GATGCCCAGAATGCTGTCCA+AGG - chr5.2:81717039-81717058 None:intergenic 55.0%
GGATCGCCGATGACAACTTC+AGG - chr5.2:81717932-81717951 None:intergenic 55.0%
GGGTGGTAAGGCTGCTCTTA+AGG + chr5.2:81719266-81719285 MS.gene81223:CDS 55.0%
GTAGTTACCTGTGTGGAGGG+TGG + chr5.2:81719249-81719268 MS.gene81223:CDS 55.0%
GTTACCTGGTCAACTGCGGA+AGG - chr5.2:81715618-81715637 None:intergenic 55.0%
TACCTGTGTGGAGGGTGGTA+AGG + chr5.2:81719254-81719273 MS.gene81223:CDS 55.0%
TCCACATCGCGAACATACGG+TGG + chr5.2:81718401-81718420 MS.gene81223:CDS 55.0%
TCCACCGTATGTTCGCGATG+TGG - chr5.2:81718405-81718424 None:intergenic 55.0%
TCGCGAACATACGGTGGAAC+TGG + chr5.2:81718407-81718426 MS.gene81223:CDS 55.0%
TCTGCTCATTGGGGCTAAGG+TGG - chr5.2:81719002-81719021 None:intergenic 55.0%
TGTTCAGGCGTAGCATCTGG+AGG - chr5.2:81716400-81716419 None:intergenic 55.0%
! GATGAGGGTGTGTGCGATTG+TGG + chr5.2:81715182-81715201 MS.gene81223:CDS 55.0%
!! AGCAAGGGCATCTGGAAAGG+GGG + chr5.2:81716294-81716313 MS.gene81223:CDS 55.0%
!! ATCCGCTTTTGTGGAGCAGG+TGG - chr5.2:81715336-81715355 None:intergenic 55.0%
!! ATGCGGCTTTGAGCATCGGT+AGG - chr5.2:81718353-81718372 None:intergenic 55.0%
!! CGAGCAAGGGCATCTGGAAA+GGG + chr5.2:81716292-81716311 MS.gene81223:CDS 55.0%
!! GAGCAAGGGCATCTGGAAAG+GGG + chr5.2:81716293-81716312 MS.gene81223:CDS 55.0%
!! GGCGCTGGATCCAAGTTTTC+TGG - chr5.2:81716001-81716020 None:intergenic 55.0%
!! TGGTTTGCTGACAGGCAAGC+TGG - chr5.2:81716776-81716795 None:intergenic 55.0%
AGCCTTACCACCCTCCACAC+AGG - chr5.2:81719259-81719278 None:intergenic 60.0%
CAGACATGCCCAACCTCTGC+AGG - chr5.2:81718667-81718686 None:intergenic 60.0%
CCCTGGAACTCAGAGGCCAA+AGG - chr5.2:81718587-81718606 None:intergenic 60.0%
CCCTTTGGCCTCTGAGTTCC+AGG + chr5.2:81718583-81718602 MS.gene81223:CDS 60.0%
CGCTGTTCAGGCGTAGCATC+TGG - chr5.2:81716403-81716422 None:intergenic 60.0%
CTCATTGGGGCTAAGGTGGG+TGG - chr5.2:81718998-81719017 None:intergenic 60.0%
GCCCAAACTGCTCACACGAG+TGG + chr5.2:81717617-81717636 MS.gene81223:CDS 60.0%
!! GCGAGCAAGGGCATCTGGAA+AGG + chr5.2:81716291-81716310 MS.gene81223:CDS 60.0%
TGGGGCTAAGGTGGGTGGCC+AGG - chr5.2:81718993-81719012 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 81714328 81719701 81714328 ID=MS.gene81223
chr5.2 mRNA 81714328 81719701 81714328 ID=MS.gene81223.t1;Parent=MS.gene81223
chr5.2 exon 81714328 81714591 81714328 ID=MS.gene81223.t1.exon1;Parent=MS.gene81223.t1
chr5.2 CDS 81714328 81714591 81714328 ID=cds.MS.gene81223.t1;Parent=MS.gene81223.t1
chr5.2 exon 81715180 81715632 81715180 ID=MS.gene81223.t1.exon2;Parent=MS.gene81223.t1
chr5.2 CDS 81715180 81715632 81715180 ID=cds.MS.gene81223.t1;Parent=MS.gene81223.t1
chr5.2 exon 81715827 81716102 81715827 ID=MS.gene81223.t1.exon3;Parent=MS.gene81223.t1
chr5.2 CDS 81715827 81716102 81715827 ID=cds.MS.gene81223.t1;Parent=MS.gene81223.t1
chr5.2 exon 81716271 81716440 81716271 ID=MS.gene81223.t1.exon4;Parent=MS.gene81223.t1
chr5.2 CDS 81716271 81716440 81716271 ID=cds.MS.gene81223.t1;Parent=MS.gene81223.t1
chr5.2 exon 81716722 81716934 81716722 ID=MS.gene81223.t1.exon5;Parent=MS.gene81223.t1
chr5.2 CDS 81716722 81716934 81716722 ID=cds.MS.gene81223.t1;Parent=MS.gene81223.t1
chr5.2 exon 81717014 81717200 81717014 ID=MS.gene81223.t1.exon6;Parent=MS.gene81223.t1
chr5.2 CDS 81717014 81717200 81717014 ID=cds.MS.gene81223.t1;Parent=MS.gene81223.t1
chr5.2 exon 81717419 81717470 81717419 ID=MS.gene81223.t1.exon7;Parent=MS.gene81223.t1
chr5.2 CDS 81717419 81717470 81717419 ID=cds.MS.gene81223.t1;Parent=MS.gene81223.t1
chr5.2 exon 81717564 81717793 81717564 ID=MS.gene81223.t1.exon8;Parent=MS.gene81223.t1
chr5.2 CDS 81717564 81717793 81717564 ID=cds.MS.gene81223.t1;Parent=MS.gene81223.t1
chr5.2 exon 81717902 81718000 81717902 ID=MS.gene81223.t1.exon9;Parent=MS.gene81223.t1
chr5.2 CDS 81717902 81718000 81717902 ID=cds.MS.gene81223.t1;Parent=MS.gene81223.t1
chr5.2 exon 81718089 81718747 81718089 ID=MS.gene81223.t1.exon10;Parent=MS.gene81223.t1
chr5.2 CDS 81718089 81718747 81718089 ID=cds.MS.gene81223.t1;Parent=MS.gene81223.t1
chr5.2 exon 81718855 81719352 81718855 ID=MS.gene81223.t1.exon11;Parent=MS.gene81223.t1
chr5.2 CDS 81718855 81719352 81718855 ID=cds.MS.gene81223.t1;Parent=MS.gene81223.t1
chr5.2 exon 81719446 81719701 81719446 ID=MS.gene81223.t1.exon12;Parent=MS.gene81223.t1
chr5.2 CDS 81719446 81719701 81719446 ID=cds.MS.gene81223.t1;Parent=MS.gene81223.t1
Gene Sequence

>MS.gene81223

ATGCAGATTTTGTCCAATTGTATTGATGAAAGGAGGCTTCAAATGTTGTTAAGTAGTGGTACAGTGAACACTCCACAGTTAATGTGTCCGAAGAATTTGGAGTTACAAAAGGAGCATAGATATGTTGCAGAATCTGTAGAACAATGCCCAATTCTTGATGACTTTGTTCACATGAAGCTTGGATTATCATTCCCTTGGAAAGCATATGTAACATTGGACTCTGCACTTTTGTCCGATTTGGTTAACGTTTTGCTCCGTGGAAAGGTAGAGTTTTTACTATGTATCTGTTATGCCTAAAAGTTCTGTAGTTTAAATTGTTGATTCTGCTTGGAATTTGTTGGTACCTATGAATCATCCTAATTTACATAGTGATTGACCTTTAGACATCTTATATGCCTCATTTCTTTTAAGAATGTTGAGTGCATGTTTGCTTCCACATTGGTGTGGAGTTGAATGTGCGGTTGATAAACTCTACAAGACATAGCTTTTATCCTGTTTTACAGTATACCAACCACACTTTGAGTTTGTCGAAGCTCGGTGAGAAACAAAACCAGTAGTAATGCATCGTATGGATTTTCGATGATACCATTTTTATGCCCTTGCTAGAAGTTTGAAGATTCCTTTGAATTTGTAAACCAGAATCATAACATTCTTTTCAGCTTTGCTAGTGCTATAATTAATTCATATTTTGATGTTTAAAACACAGTGTAGTGCTAATCGTACTTTATTCTAGAATTTCATTTTACCTATAGTCTAATAACTTGATTATGTAAAGTAGTGGATTTTTGAAGATACATGCTTATTTGAAACATATAATTAATTCACTTTTTTATTTTGGTTTTGCAATCACAGGTGATGAGGGTGTGTGCGATTGTGGATAATGTGAATTTATCTAGTTTAATTAAAGGATGTTGTTTGGTCCTTATTGGCATTATACTGTCCCACAAGTTGTCTGGCTTTTGTTTACTAAGGAAGAATCAAAAGCAGAAGGTAGTTAAGGAGCATCCACCTGCTCCACAAAAGCGGATTCAACATTGTATGCCCGGTCATTCAAAGGCTACTGGTTGGCGGAGAAAAAAGTTGCTAGTTATTTTTATGTCAGTTGGAATCCTTGGTTCTGCATGGTTATTTAGGTACATGAGTTCAGACATTGCACAAAGAAGAGAAGAAATGCTTGCCACTATGTGTGATGAGAGAGCCCGTATGTTGCAAGATCAATTTAACGTGAGCATGAACCATGTCCATGCTCTCGCTATTCTTGTGTCTACATTTCACCATGGTAAACATCCTTCCGCAGTTGACCAGGTAACATACTCAATGTCATTATTTTCTCTTATTGGGGTATTGCCTCGGGTCTGCTAGTTCATATTTCATATTTAGAGTTATTCATGGCTTATTTATTGTTATTGTTTTAATTTTAATATTACACATTTTAAGGAAAACAATTGAAGTGATAAAGTATAAGGAAAAATAACATTGAAGCTTTTGTTTGACTGCAGAAAATATTTGGAGAATATACAGAGAGTTCGGCATTTGAGAGGCCACTTACTAGTGGTGTTGCTTATGCTTTGAAAGTTCTCCATTCTGATAGGATGCATTTTGAGAAGCAGCATGGTTGGACAATTAAGAAAATGGAAACTGAGAACGAGGCATTAGTTCAAGAATGTATTCCAGAAAACTTGGATCCAGCGCCCATTCAAGATGAATATGCACCAGTCGTATTTGCTCAAGAAACGGTTTCTCATATTGTATCCATCGACATGATGTCAGGGAAGGTGTGCCTCTCTTAGCTTGCTATCACACCTTATGTTATTGACAGTCGTCACAGTCATAGTGATAGATTCAGATGAAATAAGCTTGGATCTTTTGTCTGTAGATTTTTGCATTAAATTGCTCACATATCAGGTTGTAACAAAATTTTATTTTTTTGCATTGTTATATAGGAGGATCGTGAGAATATTTTGCGAGCAAGGGCATCTGGAAAGGGGGTTCTGACATCCCCTTTTAAACTACTAAAGTCCAATTACCTCGGTGTTGTACTTACATTTGCTGTCTATGACTCTAAGCTTCCTCCAGATGCTACGCCTGAACAGCGTATTGAAGCTACTGTGGGGTAATTTTATCCAATGATAACTTAATGAGATTAATACACATACACTATCAACGTAAATAAGTTTTACACATTCATCCTATGATGTGTTGCCACATCACTTAATTAGTTACATTCATCCTACCGTGGAGTATTTTTACAATGTCGGTGTATTGGATGTAATGTGTGTGTTGGTATCCGTGTATCACATGCATTTGTAAAACCTCTTTACAGTGACAGTGTATATATTTTAACTCAATTACAAACTGAATGTAATGTGTGTGTTGTTATCCATGTATTGGAAGGTATCTGGGTGCATCCTATGATGTTCCATCACTTGTGGACAAGCTTCTTCACCAGCTTGCCTGTCAGCAAACCATTGCTGTCAATGTGTATGACACAACTAATGCATCTGATCCTATTACGATGTATGGTACCGATGTTCTTGATACTGGCTTACTACACGTAAGCGGTCTAGATTTTGGGGATCCACTACGAAAACATGAGATGCACTGCAGGTTTGTTTTCACTATAAAGTTCTATTTTATGCCCAAATAATTGAAATATCACATAAGTATATTTCCATTTTTTTGCCAGGTTCAAGCATATGCCTCCATTTCCTTGGACAGCATTCTGGGCATCCTTGGGGGTATTTGTTATTACCTTTCTTCTTGGATATATATTTTATGCAGCAATAAATCGAATAGCTAAAGTGGAAGATGACTATTGTCAAATGAGAGAGCTGAAAGTTCGTGCTGAAGCTGCAGATGTCGCAAAATCTCAGGTTAGATATATTTTGGGGATCGTTGCTTTCTGTAATGCAACAAAATTGTTTCCGATGGCAAGAATGTTAGGATTTCTGTTGCAAATTCATATGTTCAATACATCATATGTTGATCATGTTAAACATGAGAATTATTACTCACAACTTATATAACCTTTTATGTAATTGAAATTAATAATTCTCTCTTGACCTCAAAGGATTAGTTTCTCTTTTTGTAGTTTCTTGCGACAGTTTCACATGAGATCAGGACTCCAATGAATGGTGTTTTAGGTAATTGAGAATAATTTGTTGTTGTTATAATAGATAATCCCATCTGGTAAACACTTGTTGGCTAATCTCAACTGTTTTCAAATAATTTTCCAGGTATGCTGCAAATGTTGATGGATACTGACCTTGATGACAATCAGATGGATTTTGCCCAAACTGCTCACACGAGTGGTAAAGATCTTATATCGGTTATAAGCGAGGTTCTCTATCAAGCTAAGATCGAGGCAGGCAAACTAGAACTTGAGGCTGTAGCTTTTCATCCACATGCAATTCTAGATGAAGTTCTATCACTTTTCTCTGAAAAGTCCGATGAAAAAGGAATTGAGGTGAAGCCCTATCTTTAGATACTTTACTTTGTTTTGTACCCTCCAATTATCTCGGCATTCAGTCTTAACATAAACTTATGTTCTCTATACCTTTTTGGTTGAGTACAGTTGGCTGTTTATGCATCTAACCAAGTACCTGAAGTTGTCATCGGCGATCCTAAACGCTTCCGACAAATAATTACCAATCTTGTTGGAAATTCGCTTAAGGTTTGCAACATTTTACACTGAACTATCATCTCTTTTAGCTGCTGCGGATTTATAATCTCTGTTAATTAGTTTACTTGCTGCATTTCAGTTCATTCACAATAAAGGACATGTTTTTGTCTCGATTCATCTGGCAAATGAAGTGAAGAGTCCACTTCACATCATGGATGCAGTGCTGAGAGAATGCTTAAACTTGAATCAGGACATGTCGGAAAGAACATGCAATACATTGAGTGGATTTCCTGTAGGAAACAGATGGAAAAGCTGGGAAAAGTTTCAAAAGTTAAATTTGGCGCATGAGTCAGAAACTATCCAACTACTAGTAACAGTCGAGGACACTGGTATAGGAATTCCTACCGATGCTCAAAGCCGCATATTTACACCTTTCATGCAGGCTGATAGTTCCACATCGCGAACATACGGTGGAACTGGAATAGGATTAAGCATTAGTAAATGTCTAGTTGACCTCATGGGAGGAGAAATTGGATTTGTAAGTGAGCCTGAAATTGGAAGTACTTTTTCATTTACTGGAAATTTTAGAAAAGGAGAAACAGAATCTGTGGATGAGAAATGGCAGAAGAATAACCCTTTGGCCTCTGAGTTCCAGGGTTTGAGAGCATTAGTAATAGATAGAAGAAAAATCCGGGCTGAGGTTACACGATATCACCTGCAGAGGTTGGGCATGTCTGTAGATGTAAATTCCAGTCTTCAATCTGCTTGCTTTTCTATTTCTGATACTTGCAACTCAAGGTAATGTGTTAGTTTTTTTGGTCTAAGATGAAAATTCAGATCAGTTGTACCGGACATTAGGTTATTATAATATTTACTAATTATTGCTTTTGTTTCCATTCTTTCAGTATGTCGACGCAGTTGGCCATGATTCTTATAGACAAGGATTCTTGGGACAAGGAAAGTAGCATCTTATACGCAATCAAGAAACAAGGACAGAATGGCGTCAAAGGTGACTCGCTAAACTTTCCAAAGATTTTTCTCCTGGCCACCCACCTTAGCCCCAATGAGCAGAAGGAGCTAAAGTCAGTTGGTATCATAGATGATGTACTAATGAAGCCTCTTTGGCAAAGTGTTTTGATTCGCAACTACAGAGAATCCCTTGGAACTGGGAGAAAACAAATAGACAGAAAAAAAGTATCCCAACTTGAAAATTTATTGATACACAAACGAATTTTGGTGGTCGATGATAACGCAGTGAACAGAAAAGTTGCAGAAGGTGTTCTGCGAAAATATGGAGCAGTAGTTACCTGTGTGGAGGGTGGTAAGGCTGCTCTTAAGGTGCTTAAACCACCACATAATTTTGATGCTTGTTTCATGGATCTCCAAATGCCAGAAATGGACGGGTAATTAATCTGCATATTCTTCATCTGTTTAGTTTGTTTTTGACTTTTGTATGCAAGTATAATTCACAAGTATTTTCTTCTTACATGTTGCAGTTTTGAGGTGACTAGGCTAATCCGGTATATGGAGAACGAGGTAAATGAAAAAATTGCTTGTGGGGAAGAATTGGCAGAGATGTTTGGTAACATTTCTTACTGGCACATACCAATACTAGCTATGACAGCTGATGTAACTCAAGCATCAAATGAAGAATGCAAAAAATGTGGGATGGATGACTTTGTGTCAAAGCCATTTGAAGAAGAGCAACTCTATACGGCAGTGGCACGTGTCTTCAGTTTTTGTTCACAGTAA
Protein sequence

>MS.gene81223.t1

MQILSNCIDERRLQMLLSSGTVNTPQLMCPKNLELQKEHRYVAESVEQCPILDDFVHMKLGLSFPWKAYVTLDSALLSDLVNVLLRGKVMRVCAIVDNVNLSSLIKGCCLVLIGIILSHKLSGFCLLRKNQKQKVVKEHPPAPQKRIQHCMPGHSKATGWRRKKLLVIFMSVGILGSAWLFRYMSSDIAQRREEMLATMCDERARMLQDQFNVSMNHVHALAILVSTFHHGKHPSAVDQKIFGEYTESSAFERPLTSGVAYALKVLHSDRMHFEKQHGWTIKKMETENEALVQECIPENLDPAPIQDEYAPVVFAQETVSHIVSIDMMSGKEDRENILRARASGKGVLTSPFKLLKSNYLGVVLTFAVYDSKLPPDATPEQRIEATVGYLGASYDVPSLVDKLLHQLACQQTIAVNVYDTTNASDPITMYGTDVLDTGLLHVSGLDFGDPLRKHEMHCRFKHMPPFPWTAFWASLGVFVITFLLGYIFYAAINRIAKVEDDYCQMRELKVRAEAADVAKSQFLATVSHEIRTPMNGVLGMLQMLMDTDLDDNQMDFAQTAHTSGKDLISVISEVLYQAKIEAGKLELEAVAFHPHAILDEVLSLFSEKSDEKGIELAVYASNQVPEVVIGDPKRFRQIITNLVGNSLKFIHNKGHVFVSIHLANEVKSPLHIMDAVLRECLNLNQDMSERTCNTLSGFPVGNRWKSWEKFQKLNLAHESETIQLLVTVEDTGIGIPTDAQSRIFTPFMQADSSTSRTYGGTGIGLSISKCLVDLMGGEIGFVSEPEIGSTFSFTGNFRKGETESVDEKWQKNNPLASEFQGLRALVIDRRKIRAEVTRYHLQRLGMSVDVNSSLQSACFSISDTCNSSMSTQLAMILIDKDSWDKESSILYAIKKQGQNGVKGDSLNFPKIFLLATHLSPNEQKELKSVGIIDDVLMKPLWQSVLIRNYRESLGTGRKQIDRKKVSQLENLLIHKRILVVDDNAVNRKVAEGVLRKYGAVVTCVEGGKAALKVLKPPHNFDACFMDLQMPEMDGFEVTRLIRYMENEVNEKIACGEELAEMFGNISYWHIPILAMTADVTQASNEECKKCGMDDFVSKPFEEEQLYTAVARVFSFCSQ