Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene82521.t1 | XP_003612408.2 | 96.2 | 573 | 15 | 3 | 1 | 572 | 1 | 567 | 0.00E+00 | 1077.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene82521.t1 | O22757 | 57.5 | 576 | 228 | 7 | 4 | 565 | 10 | 582 | 3.9e-179 | 629.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene82521.t1 | G7K2K3 | 96.2 | 573 | 15 | 3 | 1 | 572 | 1 | 567 | 0.0e+00 | 1077.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049993 | MS.gene82521 | 0.821053 | 4.95E-53 | -1.69E-46 |
MS.gene051525 | MS.gene82521 | 0.810816 | 9.55E-51 | -1.69E-46 |
MS.gene051568 | MS.gene82521 | 0.823692 | 1.21E-53 | -1.69E-46 |
MS.gene051588 | MS.gene82521 | 0.83151 | 1.60E-55 | -1.69E-46 |
MS.gene052011 | MS.gene82521 | -0.845515 | 3.87E-59 | -1.69E-46 |
MS.gene053176 | MS.gene82521 | 0.827429 | 1.57E-54 | -1.69E-46 |
MS.gene054183 | MS.gene82521 | 0.867003 | 1.89E-65 | -1.69E-46 |
MS.gene054548 | MS.gene82521 | 0.82612 | 3.23E-54 | -1.69E-46 |
MS.gene054719 | MS.gene82521 | 0.806175 | 9.35E-50 | -1.69E-46 |
MS.gene054920 | MS.gene82521 | 0.833525 | 5.07E-56 | -1.69E-46 |
MS.gene055217 | MS.gene82521 | 0.813865 | 2.06E-51 | -1.69E-46 |
MS.gene055356 | MS.gene82521 | 0.834404 | 3.06E-56 | -1.69E-46 |
MS.gene055358 | MS.gene82521 | 0.83434 | 3.17E-56 | -1.69E-46 |
MS.gene055701 | MS.gene82521 | 0.805913 | 1.06E-49 | -1.69E-46 |
MS.gene05594 | MS.gene82521 | 0.812741 | 3.64E-51 | -1.69E-46 |
MS.gene057476 | MS.gene82521 | 0.809971 | 1.45E-50 | -1.69E-46 |
MS.gene058208 | MS.gene82521 | 0.822845 | 1.91E-53 | -1.69E-46 |
MS.gene058209 | MS.gene82521 | 0.807736 | 4.37E-50 | -1.69E-46 |
MS.gene059420 | MS.gene82521 | 0.843139 | 1.68E-58 | -1.69E-46 |
MS.gene059609 | MS.gene82521 | 0.825618 | 4.25E-54 | -1.69E-46 |
MS.gene059958 | MS.gene82521 | 0.858469 | 8.06E-63 | -1.69E-46 |
MS.gene061114 | MS.gene82521 | -0.866355 | 3.03E-65 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene82521.t1 | MTR_5g024700 | 96.161 | 573 | 15 | 3 | 1 | 572 | 1 | 567 | 0.0 | 1129 |
MS.gene82521.t1 | MTR_8g073130 | 69.052 | 559 | 155 | 10 | 3 | 551 | 8 | 558 | 0.0 | 749 |
MS.gene82521.t1 | MTR_8g073130 | 69.779 | 407 | 115 | 5 | 3 | 405 | 8 | 410 | 0.0 | 583 |
MS.gene82521.t1 | MTR_8g073130 | 70.153 | 392 | 109 | 5 | 3 | 390 | 8 | 395 | 0.0 | 561 |
MS.gene82521.t1 | MTR_3g115960 | 56.970 | 495 | 186 | 4 | 28 | 498 | 9 | 500 | 0.0 | 547 |
MS.gene82521.t1 | MTR_3g115940 | 46.403 | 556 | 264 | 11 | 30 | 565 | 9 | 550 | 7.88e-167 | 486 |
MS.gene82521.t1 | MTR_6g033330 | 47.619 | 504 | 253 | 6 | 30 | 524 | 9 | 510 | 5.08e-161 | 472 |
MS.gene82521.t1 | MTR_3g115940 | 45.793 | 511 | 243 | 11 | 75 | 565 | 3 | 499 | 1.38e-154 | 452 |
MS.gene82521.t1 | MTR_2g093750 | 45.419 | 513 | 257 | 6 | 30 | 524 | 8 | 515 | 5.33e-149 | 441 |
MS.gene82521.t1 | MTR_3g115940 | 42.549 | 557 | 241 | 12 | 30 | 565 | 9 | 507 | 1.25e-140 | 417 |
MS.gene82521.t1 | MTR_6g033330 | 46.829 | 410 | 211 | 3 | 23 | 425 | 2 | 411 | 2.43e-134 | 397 |
MS.gene82521.t1 | MTR_3g115940 | 51.302 | 384 | 171 | 5 | 30 | 404 | 9 | 385 | 3.96e-131 | 388 |
MS.gene82521.t1 | MTR_8g010530 | 41.829 | 514 | 270 | 7 | 30 | 522 | 12 | 517 | 4.82e-127 | 383 |
MS.gene82521.t1 | MTR_3g118190 | 43.297 | 455 | 231 | 6 | 30 | 466 | 12 | 457 | 1.14e-126 | 382 |
MS.gene82521.t1 | MTR_4g079140 | 38.748 | 511 | 275 | 6 | 30 | 537 | 7 | 482 | 1.91e-119 | 365 |
MS.gene82521.t1 | MTR_8g010500 | 42.612 | 467 | 246 | 8 | 48 | 494 | 28 | 492 | 3.51e-116 | 355 |
MS.gene82521.t1 | MTR_2g028470 | 40.249 | 482 | 263 | 8 | 29 | 498 | 7 | 475 | 1.55e-109 | 336 |
MS.gene82521.t1 | MTR_2g079500 | 37.705 | 488 | 267 | 10 | 23 | 492 | 2 | 470 | 8.71e-105 | 326 |
MS.gene82521.t1 | MTR_5g022400 | 34.436 | 514 | 313 | 11 | 24 | 527 | 4 | 503 | 7.89e-82 | 266 |
MS.gene82521.t1 | MTR_2g006280 | 33.333 | 546 | 324 | 13 | 30 | 547 | 9 | 542 | 1.71e-81 | 266 |
MS.gene82521.t1 | MTR_5g022400 | 35.052 | 388 | 237 | 8 | 24 | 401 | 4 | 386 | 1.53e-59 | 203 |
MS.gene82521.t1 | MTR_2g030020 | 38.017 | 121 | 46 | 4 | 368 | 488 | 8 | 99 | 9.33e-18 | 81.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene82521.t1 | AT2G17480 | 58.707 | 557 | 215 | 7 | 21 | 565 | 29 | 582 | 0.0 | 648 |
MS.gene82521.t1 | AT2G17430 | 57.169 | 544 | 219 | 4 | 3 | 545 | 8 | 538 | 0.0 | 624 |
MS.gene82521.t1 | AT5G65970 | 57.473 | 562 | 211 | 8 | 15 | 567 | 21 | 563 | 0.0 | 616 |
MS.gene82521.t1 | AT2G33670 | 55.711 | 499 | 203 | 6 | 30 | 527 | 15 | 496 | 0.0 | 555 |
MS.gene82521.t1 | AT1G42560 | 58.222 | 450 | 182 | 4 | 30 | 476 | 14 | 460 | 0.0 | 518 |
MS.gene82521.t1 | AT1G61560 | 46.435 | 547 | 269 | 7 | 30 | 564 | 8 | 542 | 4.84e-168 | 490 |
MS.gene82521.t1 | AT1G61560 | 45.355 | 549 | 272 | 9 | 30 | 564 | 8 | 542 | 7.11e-161 | 472 |
MS.gene82521.t1 | AT5G65970 | 60.989 | 364 | 126 | 4 | 15 | 378 | 21 | 368 | 1.01e-160 | 468 |
MS.gene82521.t1 | AT1G11310 | 50.000 | 458 | 214 | 3 | 30 | 472 | 8 | 465 | 2.50e-156 | 459 |
MS.gene82521.t1 | AT2G39200 | 45.759 | 507 | 265 | 5 | 30 | 527 | 6 | 511 | 1.57e-153 | 452 |
MS.gene82521.t1 | AT1G61560 | 51.740 | 431 | 196 | 3 | 30 | 448 | 8 | 438 | 4.14e-153 | 447 |
MS.gene82521.t1 | AT1G61560 | 44.715 | 492 | 248 | 7 | 85 | 564 | 1 | 480 | 1.10e-141 | 420 |
MS.gene82521.t1 | AT1G61560 | 44.715 | 492 | 248 | 7 | 85 | 564 | 1 | 480 | 1.10e-141 | 420 |
MS.gene82521.t1 | AT1G61560 | 50.856 | 409 | 189 | 3 | 29 | 425 | 7 | 415 | 2.45e-141 | 416 |
MS.gene82521.t1 | AT1G61560 | 50.856 | 409 | 189 | 3 | 29 | 425 | 7 | 415 | 2.45e-141 | 416 |
MS.gene82521.t1 | AT1G42560 | 57.027 | 370 | 153 | 4 | 30 | 396 | 14 | 380 | 1.54e-138 | 407 |
MS.gene82521.t1 | AT3G45290 | 42.888 | 457 | 248 | 3 | 30 | 486 | 17 | 460 | 3.11e-135 | 403 |
MS.gene82521.t1 | AT1G61560 | 51.562 | 384 | 174 | 3 | 30 | 401 | 8 | 391 | 4.59e-134 | 397 |
MS.gene82521.t1 | AT1G61560 | 51.562 | 384 | 174 | 3 | 30 | 401 | 8 | 391 | 4.59e-134 | 397 |
MS.gene82521.t1 | AT1G61560 | 51.562 | 384 | 174 | 3 | 30 | 401 | 8 | 391 | 4.59e-134 | 397 |
MS.gene82521.t1 | AT1G11310 | 49.148 | 411 | 194 | 5 | 30 | 425 | 8 | 418 | 4.33e-133 | 395 |
MS.gene82521.t1 | AT2G44110 | 41.633 | 502 | 278 | 7 | 31 | 529 | 7 | 496 | 3.73e-130 | 390 |
MS.gene82521.t1 | AT1G11310 | 45.682 | 440 | 221 | 5 | 85 | 507 | 1 | 439 | 1.92e-129 | 389 |
MS.gene82521.t1 | AT2G44110 | 41.468 | 504 | 277 | 9 | 31 | 529 | 7 | 497 | 3.45e-128 | 385 |
MS.gene82521.t1 | AT4G02600 | 42.236 | 483 | 259 | 8 | 31 | 500 | 9 | 484 | 7.97e-127 | 382 |
MS.gene82521.t1 | AT4G02600 | 42.236 | 483 | 259 | 8 | 31 | 500 | 9 | 484 | 7.97e-127 | 382 |
MS.gene82521.t1 | AT4G24250 | 40.580 | 483 | 266 | 7 | 29 | 500 | 6 | 478 | 3.39e-111 | 340 |
MS.gene82521.t1 | AT5G53760 | 38.912 | 478 | 283 | 7 | 22 | 492 | 8 | 483 | 3.43e-107 | 333 |
MS.gene82521.t1 | AT5G53760 | 38.912 | 478 | 283 | 7 | 22 | 492 | 8 | 483 | 3.43e-107 | 333 |
MS.gene82521.t1 | AT1G26700 | 38.703 | 478 | 281 | 8 | 24 | 492 | 4 | 478 | 1.18e-103 | 323 |
MS.gene82521.t1 | AT1G26700 | 38.703 | 478 | 281 | 8 | 24 | 492 | 4 | 478 | 1.18e-103 | 323 |
MS.gene82521.t1 | AT4G24250 | 41.730 | 393 | 208 | 7 | 29 | 410 | 6 | 388 | 3.39e-91 | 286 |
MS.gene82521.t1 | AT1G11000 | 33.902 | 469 | 290 | 8 | 30 | 490 | 9 | 465 | 1.11e-80 | 264 |
MS.gene82521.t1 | AT1G11000 | 33.902 | 469 | 290 | 8 | 30 | 490 | 9 | 465 | 1.11e-80 | 264 |
MS.gene82521.t1 | AT1G11000 | 33.416 | 404 | 255 | 6 | 30 | 427 | 9 | 404 | 4.73e-66 | 221 |
Find 108 sgRNAs with CRISPR-Local
Find 365 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCCACAAGATATATGTTATT+TGG | 0.146379 | 5.2:-15393186 | None:intergenic |
AACATAATGCTTACAATAAT+TGG | 0.167606 | 5.2:-15392829 | None:intergenic |
TAATTTGTTGCAGATAATTT+TGG | 0.171828 | 5.2:+15392900 | MS.gene82521:intron |
GAAAGTGAACTCATCATTAT+TGG | 0.216889 | 5.2:-15394115 | None:intergenic |
GCCATTATAAAAGTAGCTTT+TGG | 0.241594 | 5.2:+15393398 | MS.gene82521:CDS |
CAGGATGGCGTACTCCAATA+TGG | 0.262453 | 5.2:+15392794 | MS.gene82521:intron |
TCTTGTTTGTGTCTCTTCTA+TGG | 0.266325 | 5.2:+15387776 | MS.gene82521:CDS |
ATTTCACTGTTATTAACTAT+TGG | 0.268067 | 5.2:+15390406 | MS.gene82521:CDS |
TGGAAATTAAATTTACTTCC+AGG | 0.296007 | 5.2:-15392155 | None:intergenic |
AGTGCTGTCACAATGCTTCT+TGG | 0.313331 | 5.2:+15391082 | MS.gene82521:CDS |
GTTTCTCACCATGAATGTTT+AGG | 0.319021 | 5.2:-15392369 | None:intergenic |
TTCTTGCTCCTAAACATTCA+TGG | 0.336700 | 5.2:+15392361 | MS.gene82521:CDS |
CAATCATGTAGATGGGTTCT+AGG | 0.343095 | 5.2:+15393773 | MS.gene82521:intron |
GACGGGACGCACAATATAAA+AGG | 0.355343 | 5.2:-15391496 | None:intergenic |
ATACCTGAAACAAAGCAAAA+TGG | 0.358535 | 5.2:-15393068 | None:intergenic |
GTGCCATTTCTTTAATGCCT+TGG | 0.360439 | 5.2:-15393827 | None:intergenic |
TACCTTCCTGCTGCATTTGA+AGG | 0.366783 | 5.2:-15390593 | None:intergenic |
AACACGATCTTCAACCTTTG+AGG | 0.381549 | 5.2:+15393981 | MS.gene82521:CDS |
AAGGCTCAGATAGATACTTT+TGG | 0.393792 | 5.2:+15393013 | MS.gene82521:CDS |
GCTAGAAAATTGTTTCCGTT+TGG | 0.395613 | 5.2:+15393364 | MS.gene82521:CDS |
CCATGTCCACATAAATATAT+AGG | 0.399986 | 5.2:+15390484 | MS.gene82521:CDS |
ATTTACTTCCAGGAGCTAGA+TGG | 0.409021 | 5.2:-15392145 | None:intergenic |
ATTATCTGATAATGAGTTGA+TGG | 0.411205 | 5.2:+15394020 | MS.gene82521:CDS |
AAGCTAGGAAAATCTACTAT+AGG | 0.415964 | 5.2:+15393874 | MS.gene82521:CDS |
TAAATCCATTGCGCAAAGTC+TGG | 0.417004 | 5.2:-15391955 | None:intergenic |
ATCATTAGAAGATGACTTCA+AGG | 0.418712 | 5.2:+15392193 | MS.gene82521:CDS |
CATCCAAGGCATTAAAGAAA+TGG | 0.418981 | 5.2:+15393824 | MS.gene82521:CDS |
TCAAGTGATATTAGCAAGAA+TGG | 0.432108 | 5.2:+15392939 | MS.gene82521:CDS |
GCTTACAATAATTGGAATCA+AGG | 0.442500 | 5.2:-15392821 | None:intergenic |
ATGAGCAAGAAGCAGAAGAT+AGG | 0.443418 | 5.2:+15394073 | MS.gene82521:CDS |
GTGCAGATGCTGCAAAATTC+AGG | 0.444314 | 5.2:+15391412 | MS.gene82521:intron |
GGAATCAAGGATGCCCATAT+TGG | 0.444495 | 5.2:-15392808 | None:intergenic |
TGAGTTACAAGAGCATATAA+TGG | 0.446195 | 5.2:-15393567 | None:intergenic |
AAACGGTGAAGTGCTGGTCC+AGG | 0.458690 | 5.2:-15393940 | None:intergenic |
AGAATATGAGGATGTGTAAC+TGG | 0.460799 | 5.2:-15391033 | None:intergenic |
CAAGGAATGCCTCTTGTTCA+AGG | 0.463724 | 5.2:+15392994 | MS.gene82521:CDS |
GTTAGGAAATAGAGAAAAGA+AGG | 0.465297 | 5.2:+15390196 | MS.gene82521:CDS |
TCAAGGTAGTCGTGGGAGTA+AGG | 0.468406 | 5.2:+15392210 | MS.gene82521:CDS |
ATGGATGGTAGCACCATTGT+TGG | 0.475444 | 5.2:+15393901 | MS.gene82521:CDS |
GTATAGGTCCATCTAGCTCC+TGG | 0.477053 | 5.2:+15392137 | MS.gene82521:intron |
ATAGTAAAGTGGAACAAAGT+AGG | 0.485840 | 5.2:+15390524 | MS.gene82521:CDS |
ATTTGTGAAAACTCTTCTCA+AGG | 0.491258 | 5.2:-15387916 | None:intergenic |
TGAAGATCGTGTTGAGTGGC+CGG | 0.493387 | 5.2:-15393971 | None:intergenic |
CTGCAACTGCAAGTGATAGT+AGG | 0.493776 | 5.2:+15387813 | MS.gene82521:CDS |
ATTATATGCTCTTGTAACTC+AGG | 0.496897 | 5.2:+15393569 | MS.gene82521:CDS |
AAAACTCTTCTCAAGGGCTA+TGG | 0.499026 | 5.2:-15387909 | None:intergenic |
CTCCCTCCTTCAAATGCAGC+AGG | 0.503605 | 5.2:+15390587 | MS.gene82521:CDS |
ATCACTTGCAGTTGCAGCCA+TGG | 0.505471 | 5.2:-15387807 | None:intergenic |
AACAATGGTGCTACCATCCA+TGG | 0.508522 | 5.2:-15393899 | None:intergenic |
CTATCTGAGCCTTGAACAAG+AGG | 0.511794 | 5.2:-15393003 | None:intergenic |
TCCAAATAACATATATCTTG+TGG | 0.513239 | 5.2:+15393185 | MS.gene82521:CDS |
ATATTCATCTTGTTCCTCAA+AGG | 0.514030 | 5.2:-15393995 | None:intergenic |
TGGCAAGCTTATAGTCCAAA+CGG | 0.516392 | 5.2:-15393379 | None:intergenic |
TCACCACCTATATATTTATG+TGG | 0.522982 | 5.2:-15390490 | None:intergenic |
CTTCTATGGAGGTTTATCCA+TGG | 0.524831 | 5.2:+15387790 | MS.gene82521:CDS |
TTTAAACAGTCCTGTCCTCT+GGG | 0.526222 | 5.2:+15392324 | MS.gene82521:intron |
TATGAAATCAAATAGTAAAG+TGG | 0.527640 | 5.2:+15390513 | MS.gene82521:CDS |
AGGATGGCGTACTCCAATAT+GGG | 0.537615 | 5.2:+15392795 | MS.gene82521:intron |
GGATCAACAATGCAGTCCCC+TGG | 0.538298 | 5.2:+15393922 | MS.gene82521:CDS |
AGATACGTGGATGGAAGGAA+TGG | 0.539200 | 5.2:+15391213 | MS.gene82521:intron |
CACTTGATCAAACACCGACA+TGG | 0.539851 | 5.2:+15387849 | MS.gene82521:CDS |
CTTCACCGTTTCAAAACTAC+CGG | 0.540316 | 5.2:+15393952 | MS.gene82521:CDS |
CCTATATATTTATGTGGACA+TGG | 0.544668 | 5.2:-15390484 | None:intergenic |
TCTGCTTGAAGCTCTAGAAA+AGG | 0.545191 | 5.2:+15390220 | MS.gene82521:CDS |
CTTCCTGCTGCATTTGAAGG+AGG | 0.545611 | 5.2:-15390590 | None:intergenic |
AGAAAACTCCCTCTTGAACA+TGG | 0.547069 | 5.2:-15387756 | None:intergenic |
TTCCTGCTGCATTTGAAGGA+GGG | 0.549958 | 5.2:-15390589 | None:intergenic |
ACAGCTGATGCCCAGAGGAC+AGG | 0.549959 | 5.2:-15392334 | None:intergenic |
ACTTGATCAAACACCGACAT+GGG | 0.550596 | 5.2:+15387850 | MS.gene82521:CDS |
AGACTGCTAGGAAGAATATG+AGG | 0.552334 | 5.2:-15391045 | None:intergenic |
TAACATATATCTTGTGGACA+TGG | 0.554175 | 5.2:+15393191 | MS.gene82521:CDS |
TTTGTGAAAACTCTTCTCAA+GGG | 0.555200 | 5.2:-15387915 | None:intergenic |
GCTCTAGAAAAGGTCAAGGC+TGG | 0.557508 | 5.2:+15390230 | MS.gene82521:CDS |
TTACAAGAGCATATAATGGA+AGG | 0.557901 | 5.2:-15393563 | None:intergenic |
AACGGTGAAGTGCTGGTCCA+GGG | 0.561182 | 5.2:-15393939 | None:intergenic |
TGTTTGTGTCTCTTCTATGG+AGG | 0.561209 | 5.2:+15387779 | MS.gene82521:CDS |
AAAATCTACTATAGGAACCA+TGG | 0.573041 | 5.2:+15393882 | MS.gene82521:CDS |
GATACGTGGATGGAAGGAAT+GGG | 0.573280 | 5.2:+15391214 | MS.gene82521:intron |
ATAAGATGAAGAACTAATTG+AGG | 0.574661 | 5.2:-15393045 | None:intergenic |
TCTGCAGATACGTGGATGGA+AGG | 0.581567 | 5.2:+15391208 | MS.gene82521:intron |
AAAACACATGAAAGACTGCT+AGG | 0.587475 | 5.2:-15391057 | None:intergenic |
CATGGTTATGAGTTCGCCAA+TGG | 0.587616 | 5.2:+15391254 | MS.gene82521:CDS |
AGATGACTTCAAGGTAGTCG+TGG | 0.587794 | 5.2:+15392202 | MS.gene82521:CDS |
GAAGATAGGCATCACAGTGA+GGG | 0.593750 | 5.2:+15394087 | MS.gene82521:CDS |
AGTCCATTCACAGATAAAAG+TGG | 0.595794 | 5.2:-15391007 | None:intergenic |
TATCTACCTTCAAAAGACAC+TGG | 0.597529 | 5.2:-15390550 | None:intergenic |
AACATATATCTTGTGGACAT+GGG | 0.598646 | 5.2:+15393192 | MS.gene82521:CDS |
ATTTGATGAACAAACATCCA+AGG | 0.600958 | 5.2:+15393810 | MS.gene82521:CDS |
TACAAGAGCATATAATGGAA+GGG | 0.604802 | 5.2:-15393562 | None:intergenic |
GAAGGGTAATGTAGCTGCAG+AGG | 0.606205 | 5.2:-15393545 | None:intergenic |
ACGTGGATGGAAGGAATGGG+AGG | 0.615112 | 5.2:+15391217 | MS.gene82521:CDS |
GATTACCAGACTTTGCGCAA+TGG | 0.616232 | 5.2:+15391950 | MS.gene82521:CDS |
AATGCTTCTTGGAAGACTCA+AGG | 0.618511 | 5.2:+15391093 | MS.gene82521:CDS |
TGTTTCTGCAGATACGTGGA+TGG | 0.619092 | 5.2:+15391204 | MS.gene82521:intron |
GATGACTTCAAGGTAGTCGT+GGG | 0.621529 | 5.2:+15392203 | MS.gene82521:CDS |
GAGGAAGAGACTTTAACTCA+TGG | 0.624104 | 5.2:+15391236 | MS.gene82521:CDS |
TCTACTATAGGAACCATGGA+TGG | 0.624164 | 5.2:+15393886 | MS.gene82521:CDS |
CTCCTTCAAATGCAGCAGGA+AGG | 0.624540 | 5.2:+15390591 | MS.gene82521:CDS |
ACGGTGAAGTGCTGGTCCAG+GGG | 0.626903 | 5.2:-15393938 | None:intergenic |
GAGAGACATATAGTTGTACA+AGG | 0.627620 | 5.2:+15392976 | MS.gene82521:CDS |
AGAAGATAGGCATCACAGTG+AGG | 0.635719 | 5.2:+15394086 | MS.gene82521:CDS |
TGTCCACATAAATATATAGG+TGG | 0.645928 | 5.2:+15390487 | MS.gene82521:CDS |
AGGTTGAAGATCGTGTTGAG+TGG | 0.648335 | 5.2:-15393975 | None:intergenic |
TGAAGCTCTAGAAAAGGTCA+AGG | 0.656136 | 5.2:+15390226 | MS.gene82521:CDS |
CTTGATCAAACACCGACATG+GGG | 0.671274 | 5.2:+15387851 | MS.gene82521:CDS |
CTGCATTGTTGATCCAACAA+TGG | 0.691467 | 5.2:-15393914 | None:intergenic |
ACAGCAGCAACACCCCATGT+CGG | 0.719045 | 5.2:-15387863 | None:intergenic |
AAACTACAGCTGATGCCCAG+AGG | 0.737888 | 5.2:-15392339 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATAATAATATTAATAATAA+GGG | - | chr5.2:15390083-15390102 | None:intergenic | 0.0% |
!! | TAATAATAATATTAATAATA+AGG | - | chr5.2:15390084-15390103 | None:intergenic | 0.0% |
!! | TATTATTATTATTATTATTA+GGG | + | chr5.2:15389479-15389498 | MS.gene82521:intron | 0.0% |
!! | TTATTATTATTATTATTATT+AGG | + | chr5.2:15389478-15389497 | MS.gene82521:intron | 0.0% |
!! | AAATTATAGAATAGAATTTA+TGG | + | chr5.2:15392666-15392685 | MS.gene82521:intron | 10.0% |
!! | AATAATTTGATTAATTTCAA+TGG | + | chr5.2:15393498-15393517 | MS.gene82521:intron | 10.0% |
!! | ATAATTTGATTAATTTCAAT+GGG | + | chr5.2:15393499-15393518 | MS.gene82521:intron | 10.0% |
!! | TTAAAGTGAAAAATATTTAA+GGG | + | chr5.2:15388882-15388901 | MS.gene82521:intron | 10.0% |
!!! | ATTTTTTTAAACAAACATTA+AGG | - | chr5.2:15391793-15391812 | None:intergenic | 10.0% |
!!! | GAACTATAATTTTTATTATA+TGG | - | chr5.2:15392752-15392771 | None:intergenic | 10.0% |
!!! | TATTTTAGTACTAAATTTTT+TGG | + | chr5.2:15392460-15392479 | MS.gene82521:intron | 10.0% |
!!! | TTTAAAGTGAAAAATATTTA+AGG | + | chr5.2:15388881-15388900 | MS.gene82521:intron | 10.0% |
!!! | TTTCACTTTAAATATATTTT+TGG | - | chr5.2:15388873-15388892 | None:intergenic | 10.0% |
!!! | TTTTTTACTTTTTCATATTT+TGG | + | chr5.2:15388650-15388669 | MS.gene82521:intron | 10.0% |
!!! | TTTTTTTAAACAAACATTAA+GGG | - | chr5.2:15391792-15391811 | None:intergenic | 10.0% |
!! | AATTAGCAAAAAATTAAAAG+AGG | - | chr5.2:15391542-15391561 | None:intergenic | 15.0% |
!! | ACTTTATTATTCAAATATAG+TGG | - | chr5.2:15392283-15392302 | None:intergenic | 15.0% |
!! | CTTTATTATTCAAATATAGT+GGG | - | chr5.2:15392282-15392301 | None:intergenic | 15.0% |
!! | TAATATGATGTCTAAAAAAT+TGG | + | chr5.2:15388907-15388926 | MS.gene82521:intron | 15.0% |
!! | TAATTTGATTAATTTCAATG+GGG | + | chr5.2:15393500-15393519 | MS.gene82521:intron | 15.0% |
!! | TACAAAAACAATAATATGTA+GGG | - | chr5.2:15389429-15389448 | None:intergenic | 15.0% |
!! | TATAACTTAATAAGTTTCAT+AGG | - | chr5.2:15393131-15393150 | None:intergenic | 15.0% |
!! | TTAAGGTATACTAATAATTA+AGG | - | chr5.2:15393225-15393244 | None:intergenic | 15.0% |
!! | TTACAAAAACAATAATATGT+AGG | - | chr5.2:15389430-15389449 | None:intergenic | 15.0% |
!! | TTTAAAAAAATACAGAAAGA+TGG | + | chr5.2:15391802-15391821 | MS.gene82521:intron | 15.0% |
!!! | AAAAGTCAAGAAATTTTTTA+GGG | - | chr5.2:15389645-15389664 | None:intergenic | 15.0% |
!!! | AATTTTTTAGACATCATATT+AGG | - | chr5.2:15388908-15388927 | None:intergenic | 15.0% |
!!! | ATATTTAACTTGAAAACTTT+TGG | - | chr5.2:15389673-15389692 | None:intergenic | 15.0% |
!!! | TAAAAGTCAAGAAATTTTTT+AGG | - | chr5.2:15389646-15389665 | None:intergenic | 15.0% |
!!! | TATTTAACTTGAAAACTTTT+GGG | - | chr5.2:15389672-15389691 | None:intergenic | 15.0% |
!!! | TTTAATTTTTTGCTAATTTG+AGG | + | chr5.2:15391544-15391563 | MS.gene82521:intron | 15.0% |
!!! | TTTGTATGAAATTTTCATAT+TGG | + | chr5.2:15392853-15392872 | MS.gene82521:intron | 15.0% |
!!! | TTTTGTTAAACATACTATAT+GGG | - | chr5.2:15392007-15392026 | None:intergenic | 15.0% |
!!! | TTTTTGTTAAACATACTATA+TGG | - | chr5.2:15392008-15392027 | None:intergenic | 15.0% |
!! | AACATAATGCTTACAATAAT+TGG | - | chr5.2:15392832-15392851 | None:intergenic | 20.0% |
!! | ACCTATACATAATTTAAAGA+AGG | - | chr5.2:15392125-15392144 | None:intergenic | 20.0% |
!! | AGAAACAAAACTTTCATATA+AGG | - | chr5.2:15391191-15391210 | None:intergenic | 20.0% |
!! | ATACATAATTTAAAGAAGGA+AGG | - | chr5.2:15392121-15392140 | None:intergenic | 20.0% |
!! | ATTCTTGTATTTCAATTTCA+GGG | + | chr5.2:15391887-15391906 | MS.gene82521:intron | 20.0% |
!! | ATTTATATGATGTTAAGTGT+TGG | - | chr5.2:15388703-15388722 | None:intergenic | 20.0% |
!! | ATTTCACTGTTATTAACTAT+TGG | + | chr5.2:15390406-15390425 | MS.gene82521:CDS | 20.0% |
!! | GAAAAATGTCAAATATGTAT+TGG | - | chr5.2:15389020-15389039 | None:intergenic | 20.0% |
!! | GAAATTGAAATACAAGAATA+TGG | - | chr5.2:15391886-15391905 | None:intergenic | 20.0% |
!! | TATAATACACATCAAATAAG+TGG | + | chr5.2:15389184-15389203 | MS.gene82521:intron | 20.0% |
!! | TATAGAATAGAATTTATGGA+GGG | + | chr5.2:15392670-15392689 | MS.gene82521:intron | 20.0% |
!! | TATAGATTAGATATACTAGT+TGG | - | chr5.2:15393450-15393469 | None:intergenic | 20.0% |
!! | TATGAAATCAAATAGTAAAG+TGG | + | chr5.2:15390513-15390532 | MS.gene82521:CDS | 20.0% |
!! | TATTCTTGTATTTCAATTTC+AGG | + | chr5.2:15391886-15391905 | MS.gene82521:intron | 20.0% |
!! | TCCTCAAAAAAAAAAGATTA+AGG | - | chr5.2:15393242-15393261 | None:intergenic | 20.0% |
!! | TCCTTCTTTAAATTATGTAT+AGG | + | chr5.2:15392121-15392140 | MS.gene82521:intron | 20.0% |
!! | TTATAGAATAGAATTTATGG+AGG | + | chr5.2:15392669-15392688 | MS.gene82521:intron | 20.0% |
!! | TTGAAACAAACCTAAAATAT+GGG | - | chr5.2:15388965-15388984 | None:intergenic | 20.0% |
!! | TTTGTTAAACATACTATATG+GGG | - | chr5.2:15392006-15392025 | None:intergenic | 20.0% |
!!! | AAAGTCAAGAAATTTTTTAG+GGG | - | chr5.2:15389644-15389663 | None:intergenic | 20.0% |
!!! | AAGTTGAATTTTTCTTTTAG+TGG | + | chr5.2:15390174-15390193 | MS.gene82521:intron | 20.0% |
!!! | AATTTTGCTTTACTATTTCA+AGG | - | chr5.2:15388604-15388623 | None:intergenic | 20.0% |
!!! | ACATTTAGATAAGAGTATTT+TGG | + | chr5.2:15389157-15389176 | MS.gene82521:intron | 20.0% |
!!! | ACCTTAATCTTTTTTTTTTG+AGG | + | chr5.2:15393238-15393257 | MS.gene82521:intron | 20.0% |
!!! | ATAAGGGTTAAATATGTTTT+TGG | - | chr5.2:15390067-15390086 | None:intergenic | 20.0% |
!!! | ATGATCTTTTGATATACTTT+TGG | - | chr5.2:15392178-15392197 | None:intergenic | 20.0% |
!!! | ATTTAACTTGAAAACTTTTG+GGG | - | chr5.2:15389671-15389690 | None:intergenic | 20.0% |
!!! | ATTTTTTTGCAGTATTCTTT+TGG | + | chr5.2:15393341-15393360 | MS.gene82521:intron | 20.0% |
!!! | GAAAAGTTGGTATATTTATA+GGG | + | chr5.2:15390040-15390059 | MS.gene82521:intron | 20.0% |
!!! | TAATTGTGTGATTTTATATG+AGG | + | chr5.2:15388329-15388348 | MS.gene82521:intron | 20.0% |
!!! | TAATTTGTTGCAGATAATTT+TGG | + | chr5.2:15392900-15392919 | MS.gene82521:intron | 20.0% |
!!! | TAATTTTTATGTCTCTTTGT+CGG | - | chr5.2:15388302-15388321 | None:intergenic | 20.0% |
!!! | TCAATTTGAAATTAAATGCT+AGG | - | chr5.2:15388103-15388122 | None:intergenic | 20.0% |
!!! | TCAATTTGTTAAAATCACAA+TGG | - | chr5.2:15390864-15390883 | None:intergenic | 20.0% |
!!! | TCATTTTTAAATGAAAGAGA+AGG | - | chr5.2:15390636-15390655 | None:intergenic | 20.0% |
!!! | TTTGAAACAAACCTAAAATA+TGG | - | chr5.2:15388966-15388985 | None:intergenic | 20.0% |
!!! | TTTTGGATTAATCATTAAAG+TGG | + | chr5.2:15390772-15390791 | MS.gene82521:intron | 20.0% |
!!! | TTTTTTTGCAGTATTCTTTT+GGG | + | chr5.2:15393342-15393361 | MS.gene82521:intron | 20.0% |
! | AAAAAGTTCATGTACTAATG+AGG | - | chr5.2:15388505-15388524 | None:intergenic | 25.0% |
! | AAAGAAAAATTCAACTTGTG+AGG | - | chr5.2:15390171-15390190 | None:intergenic | 25.0% |
! | AAATGAAAGAGAAGGAAAAA+AGG | - | chr5.2:15390628-15390647 | None:intergenic | 25.0% |
! | ACATTCTTAGTTGAGTTATA+TGG | + | chr5.2:15392393-15392412 | MS.gene82521:intron | 25.0% |
! | AGGTTGGAAAAAAAAATAGA+GGG | + | chr5.2:15390009-15390028 | MS.gene82521:intron | 25.0% |
! | ATAAGATGAAGAACTAATTG+AGG | - | chr5.2:15393048-15393067 | None:intergenic | 25.0% |
! | ATAGACATTATAAGCATATG+AGG | - | chr5.2:15391379-15391398 | None:intergenic | 25.0% |
! | ATCAATGTTAAAACTATGTC+TGG | - | chr5.2:15388385-15388404 | None:intergenic | 25.0% |
! | ATTATTTATGAGAGACTTGT+AGG | + | chr5.2:15389124-15389143 | MS.gene82521:intron | 25.0% |
! | ATTTCGGCAAAAACTAAATT+TGG | + | chr5.2:15390818-15390837 | MS.gene82521:intron | 25.0% |
! | GATCAACATTGTATATTGTA+TGG | + | chr5.2:15392251-15392270 | MS.gene82521:intron | 25.0% |
! | GTCCTTATTAAAGCAAAATA+AGG | - | chr5.2:15392588-15392607 | None:intergenic | 25.0% |
! | TATAATGTTTGTTTAAGTCC+TGG | + | chr5.2:15391607-15391626 | MS.gene82521:intron | 25.0% |
! | TATATGTAACAAATCCATGA+TGG | - | chr5.2:15391591-15391610 | None:intergenic | 25.0% |
! | TATGATGTCTAAAAAATTGG+AGG | + | chr5.2:15388910-15388929 | MS.gene82521:intron | 25.0% |
! | TCAAGTTAAATATGATTGTG+TGG | + | chr5.2:15389680-15389699 | MS.gene82521:intron | 25.0% |
! | TCAATGTTAAAACTATGTCT+GGG | - | chr5.2:15388384-15388403 | None:intergenic | 25.0% |
! | TCCAAAAATAGTAAATCCTT+TGG | - | chr5.2:15390268-15390287 | None:intergenic | 25.0% |
! | TCCAAATAACATATATCTTG+TGG | + | chr5.2:15393185-15393204 | MS.gene82521:CDS | 25.0% |
! | TCCACAAGATATATGTTATT+TGG | - | chr5.2:15393189-15393208 | None:intergenic | 25.0% |
! | TGAAACAAACCTAAAATATG+GGG | - | chr5.2:15388964-15388983 | None:intergenic | 25.0% |
! | TGGAAATTAAATTTACTTCC+AGG | - | chr5.2:15392158-15392177 | None:intergenic | 25.0% |
! | TGTTGAAGATTTGATCTTAA+AGG | - | chr5.2:15388776-15388795 | None:intergenic | 25.0% |
! | TTAAAGAAGGAAGGTAAATA+TGG | - | chr5.2:15392112-15392131 | None:intergenic | 25.0% |
! | TTACTAGTAGTAAAACAACA+TGG | - | chr5.2:15388077-15388096 | None:intergenic | 25.0% |
! | TTAGTCAATGTTCAAGATTA+AGG | - | chr5.2:15393273-15393292 | None:intergenic | 25.0% |
! | TTCTTCACATTTAAGAATGT+GGG | - | chr5.2:15389380-15389399 | None:intergenic | 25.0% |
! | TTTGAACATACACATATTTG+AGG | + | chr5.2:15390891-15390910 | MS.gene82521:intron | 25.0% |
!! | ACCAAAGGATTTACTATTTT+TGG | + | chr5.2:15390264-15390283 | MS.gene82521:intron | 25.0% |
!! | AGAGTTCATATAATTTTGAG+TGG | - | chr5.2:15389872-15389891 | None:intergenic | 25.0% |
!! | ATTATCTGATAATGAGTTGA+TGG | + | chr5.2:15394020-15394039 | MS.gene82521:CDS | 25.0% |
!! | CCATTATAAAAGTAGCTTTT+GGG | + | chr5.2:15393399-15393418 | MS.gene82521:CDS | 25.0% |
!! | CGATTTGAAACTCTTAAAAT+TGG | + | chr5.2:15389758-15389777 | MS.gene82521:intron | 25.0% |
!! | GAATTTTTCTTTTAGTGGTT+AGG | + | chr5.2:15390179-15390198 | MS.gene82521:intron | 25.0% |
!! | GTTGTTCCACTAAATATTTT+GGG | + | chr5.2:15388214-15388233 | MS.gene82521:intron | 25.0% |
!! | TTAGGTTTGTTTCAAAACTT+TGG | + | chr5.2:15388970-15388989 | MS.gene82521:intron | 25.0% |
!! | TTGATTTTATCAAACCATCA+TGG | + | chr5.2:15391574-15391593 | MS.gene82521:intron | 25.0% |
!!! | CGAAAAGTTGGTATATTTAT+AGG | + | chr5.2:15390039-15390058 | MS.gene82521:intron | 25.0% |
!!! | GAATAATAAAGTGCTGAATT+TGG | + | chr5.2:15392291-15392310 | MS.gene82521:intron | 25.0% |
!!! | GTCCTTATTTTGCTTTAATA+AGG | + | chr5.2:15392583-15392602 | MS.gene82521:intron | 25.0% |
!!! | TAGTTGAATTTTTTTGACAC+AGG | + | chr5.2:15389263-15389282 | MS.gene82521:intron | 25.0% |
!!! | TGATTTTATTTGAAGCATGT+AGG | + | chr5.2:15388412-15388431 | MS.gene82521:intron | 25.0% |
!!! | TTTACAGAGTTGATGATTTT+AGG | + | chr5.2:15390379-15390398 | MS.gene82521:intron | 25.0% |
!!! | TTTTGTTTGACAAGTCAAAA+TGG | - | chr5.2:15392541-15392560 | None:intergenic | 25.0% |
AAAATCTACTATAGGAACCA+TGG | + | chr5.2:15393882-15393901 | MS.gene82521:CDS | 30.0% | |
AAACAATAATATGTAGGGAC+CGG | - | chr5.2:15389424-15389443 | None:intergenic | 30.0% | |
AAATTAAGCACATGCATTGT+TGG | - | chr5.2:15391292-15391311 | None:intergenic | 30.0% | |
AACATATATCTTGTGGACAT+GGG | + | chr5.2:15393192-15393211 | MS.gene82521:CDS | 30.0% | |
AAGAAAGAAAATGAGTAGAC+AGG | - | chr5.2:15389835-15389854 | None:intergenic | 30.0% | |
AAGAAGCTACTAGAATTGAT+GGG | - | chr5.2:15390957-15390976 | None:intergenic | 30.0% | |
AAGCTAGGAAAATCTACTAT+AGG | + | chr5.2:15393874-15393893 | MS.gene82521:CDS | 30.0% | |
ACATTGAATCGCTGAAATTT+CGG | + | chr5.2:15390802-15390821 | MS.gene82521:intron | 30.0% | |
AGAAAGAAAATGAGTAGACA+GGG | - | chr5.2:15389834-15389853 | None:intergenic | 30.0% | |
AGGACTAAACTTAAAATTCG+TGG | - | chr5.2:15392568-15392587 | None:intergenic | 30.0% | |
AGTAGATATTCTATGAAGCA+CGG | - | chr5.2:15393705-15393724 | None:intergenic | 30.0% | |
AGTAGTAAAACAACATGGAA+GGG | - | chr5.2:15388072-15388091 | None:intergenic | 30.0% | |
ATACCTGAAACAAAGCAAAA+TGG | - | chr5.2:15393071-15393090 | None:intergenic | 30.0% | |
ATAGTAAAGTGGAACAAAGT+AGG | + | chr5.2:15390524-15390543 | MS.gene82521:CDS | 30.0% | |
ATATTCATCTTGTTCCTCAA+AGG | - | chr5.2:15393998-15394017 | None:intergenic | 30.0% | |
ATCATTAGAAGATGACTTCA+AGG | + | chr5.2:15392193-15392212 | MS.gene82521:CDS | 30.0% | |
ATCCAAAATACACTTCTAGT+AGG | - | chr5.2:15390760-15390779 | None:intergenic | 30.0% | |
ATCCAAGTTAACTGGTTATA+GGG | + | chr5.2:15390977-15390996 | MS.gene82521:intron | 30.0% | |
ATTATATGCTCTTGTAACTC+AGG | + | chr5.2:15393569-15393588 | MS.gene82521:CDS | 30.0% | |
ATTGATCACAATCATGTAGA+TGG | + | chr5.2:15393765-15393784 | MS.gene82521:intron | 30.0% | |
ATTTCACTACCAATCAAGTT+AGG | + | chr5.2:15388820-15388839 | MS.gene82521:intron | 30.0% | |
ATTTGATGAACAAACATCCA+AGG | + | chr5.2:15393810-15393829 | MS.gene82521:CDS | 30.0% | |
ATTTGTGAAAACTCTTCTCA+AGG | - | chr5.2:15387919-15387938 | None:intergenic | 30.0% | |
CAAACAAACACCTAAAATGA+GGG | + | chr5.2:15389951-15389970 | MS.gene82521:intron | 30.0% | |
CATATAATACACCAAATGGT+GGG | + | chr5.2:15391718-15391737 | MS.gene82521:intron | 30.0% | |
CATTCTTAAATGTGAAGAAG+TGG | + | chr5.2:15389381-15389400 | MS.gene82521:intron | 30.0% | |
CCATGTCCACATAAATATAT+AGG | + | chr5.2:15390484-15390503 | MS.gene82521:CDS | 30.0% | |
CCTATATATTTATGTGGACA+TGG | - | chr5.2:15390487-15390506 | None:intergenic | 30.0% | |
CTTCTTCACATTTAAGAATG+TGG | - | chr5.2:15389381-15389400 | None:intergenic | 30.0% | |
CTTTAAGCCTACAAATGTAT+TGG | - | chr5.2:15388249-15388268 | None:intergenic | 30.0% | |
GAAAGTGAACTCATCATTAT+TGG | - | chr5.2:15394118-15394137 | None:intergenic | 30.0% | |
GAGGTTGGAAAAAAAAATAG+AGG | + | chr5.2:15390008-15390027 | MS.gene82521:intron | 30.0% | |
GCTTACAATAATTGGAATCA+AGG | - | chr5.2:15392824-15392843 | None:intergenic | 30.0% | |
GTCACTAAAACAATGACTTT+AGG | - | chr5.2:15388936-15388955 | None:intergenic | 30.0% | |
GTGTCACGATTTATTCAAAT+CGG | - | chr5.2:15389729-15389748 | None:intergenic | 30.0% | |
GTTAGGAAATAGAGAAAAGA+AGG | + | chr5.2:15390196-15390215 | MS.gene82521:CDS | 30.0% | |
GTTTGTTTCAAAACTTTGGA+TGG | + | chr5.2:15388974-15388993 | MS.gene82521:intron | 30.0% | |
TAACATATATCTTGTGGACA+TGG | + | chr5.2:15393191-15393210 | MS.gene82521:CDS | 30.0% | |
TAAGAAGCTACTAGAATTGA+TGG | - | chr5.2:15390958-15390977 | None:intergenic | 30.0% | |
TAGTAGTAAAACAACATGGA+AGG | - | chr5.2:15388073-15388092 | None:intergenic | 30.0% | |
TATCCAAGTTAACTGGTTAT+AGG | + | chr5.2:15390976-15390995 | MS.gene82521:intron | 30.0% | |
TCAAAAAATGTGGTTGCTTA+AGG | - | chr5.2:15389230-15389249 | None:intergenic | 30.0% | |
TCAAGTGATATTAGCAAGAA+TGG | + | chr5.2:15392939-15392958 | MS.gene82521:CDS | 30.0% | |
TCACCACCTATATATTTATG+TGG | - | chr5.2:15390493-15390512 | None:intergenic | 30.0% | |
TCCAAAATACACTTCTAGTA+GGG | - | chr5.2:15390759-15390778 | None:intergenic | 30.0% | |
TGTAATTATATGTGTCGTGT+CGG | + | chr5.2:15393627-15393646 | MS.gene82521:intron | 30.0% | |
TGTCACGATTTATTCAAATC+GGG | - | chr5.2:15389728-15389747 | None:intergenic | 30.0% | |
TGTCCACATAAATATATAGG+TGG | + | chr5.2:15390487-15390506 | MS.gene82521:CDS | 30.0% | |
TTATCATAGACTTGAAGAGT+TGG | - | chr5.2:15390298-15390317 | None:intergenic | 30.0% | |
TTGATCACAATCATGTAGAT+GGG | + | chr5.2:15393766-15393785 | MS.gene82521:intron | 30.0% | |
TTGGAACTCATATATACCAT+TGG | - | chr5.2:15391273-15391292 | None:intergenic | 30.0% | |
TTTGTGAAAACTCTTCTCAA+GGG | - | chr5.2:15387918-15387937 | None:intergenic | 30.0% | |
! | AAGTGGTGATAGAAAACTTT+TGG | + | chr5.2:15389979-15389998 | MS.gene82521:intron | 30.0% |
! | ACAAGAATATGGTTAGTCAT+TGG | - | chr5.2:15391875-15391894 | None:intergenic | 30.0% |
! | AGTGGTGATAGAAAACTTTT+GGG | + | chr5.2:15389980-15389999 | MS.gene82521:intron | 30.0% |
! | ATTTTTGTGCCTAACTTGAT+TGG | - | chr5.2:15388832-15388851 | None:intergenic | 30.0% |
! | CAGCTTTGTGAAACAATTTA+AGG | - | chr5.2:15390684-15390703 | None:intergenic | 30.0% |
! | CTGGTAAGAATTTTTACCAA+AGG | + | chr5.2:15390249-15390268 | MS.gene82521:intron | 30.0% |
! | GAGAAGAGTTTTCACAAATT+AGG | + | chr5.2:15387920-15387939 | MS.gene82521:CDS | 30.0% |
! | GAGTTTTCACAAATTAGGAA+CGG | + | chr5.2:15387925-15387944 | MS.gene82521:CDS | 30.0% |
! | GCCATTATAAAAGTAGCTTT+TGG | + | chr5.2:15393398-15393417 | MS.gene82521:CDS | 30.0% |
! | GCTAATCCGATATAATTTTC+AGG | + | chr5.2:15392775-15392794 | MS.gene82521:intron | 30.0% |
! | GGTTGTTCCACTAAATATTT+TGG | + | chr5.2:15388213-15388232 | MS.gene82521:intron | 30.0% |
! | TACAAGAGCATATAATGGAA+GGG | - | chr5.2:15393565-15393584 | None:intergenic | 30.0% |
! | TGAGTTACAAGAGCATATAA+TGG | - | chr5.2:15393570-15393589 | None:intergenic | 30.0% |
! | TTACAAGAGCATATAATGGA+AGG | - | chr5.2:15393566-15393585 | None:intergenic | 30.0% |
! | TTGTCAATTAGTTTAGTGCT+TGG | + | chr5.2:15389351-15389370 | MS.gene82521:intron | 30.0% |
!! | AACTTACTACTAGAAGTACT+TGG | + | chr5.2:15390704-15390723 | MS.gene82521:intron | 30.0% |
!! | ATCCGATATAATTTTCAGGA+TGG | + | chr5.2:15392779-15392798 | MS.gene82521:intron | 30.0% |
!! | CAACACACTTAATTTTCAAG+AGG | - | chr5.2:15388452-15388471 | None:intergenic | 30.0% |
!! | GCTTCTTTAGACAGTTTTAT+AGG | + | chr5.2:15391912-15391931 | MS.gene82521:CDS | 30.0% |
!! | TCAGATAGATACTTTTGGTT+AGG | + | chr5.2:15393018-15393037 | MS.gene82521:CDS | 30.0% |
!! | TCATACAAGTTTTTGGACTA+GGG | + | chr5.2:15391464-15391483 | MS.gene82521:CDS | 30.0% |
!! | TTCCACTAAATATTTTGGGA+GGG | + | chr5.2:15388218-15388237 | MS.gene82521:intron | 30.0% |
!!! | AACCACATTTTTTGAATGGA+GGG | + | chr5.2:15389235-15389254 | MS.gene82521:intron | 30.0% |
!!! | AAGCAACCACATTTTTTGAA+TGG | + | chr5.2:15389231-15389250 | MS.gene82521:intron | 30.0% |
!!! | CCCAAAAGCTACTTTTATAA+TGG | - | chr5.2:15393402-15393421 | None:intergenic | 30.0% |
!!! | TATCCATTTTGCTTTGTTTC+AGG | + | chr5.2:15393065-15393084 | MS.gene82521:CDS | 30.0% |
!!! | TGGATTTTAGTTGTTCTCAT+TGG | - | chr5.2:15393430-15393449 | None:intergenic | 30.0% |
AAAACACATGAAAGACTGCT+AGG | - | chr5.2:15391060-15391079 | None:intergenic | 35.0% | |
AACAAACCTAAAATATGGGG+AGG | - | chr5.2:15388961-15388980 | None:intergenic | 35.0% | |
AACAATAATATGTAGGGACC+GGG | - | chr5.2:15389423-15389442 | None:intergenic | 35.0% | |
AGAATATGAGGATGTGTAAC+TGG | - | chr5.2:15391036-15391055 | None:intergenic | 35.0% | |
AGCTTCTTATCCAAGTTAAC+TGG | + | chr5.2:15390969-15390988 | MS.gene82521:intron | 35.0% | |
AGTCCATTCACAGATAAAAG+TGG | - | chr5.2:15391010-15391029 | None:intergenic | 35.0% | |
ATGCTAGTGCTACATTTGAA+AGG | - | chr5.2:15389042-15389061 | None:intergenic | 35.0% | |
CCAAACAAACACCTAAAATG+AGG | + | chr5.2:15389950-15389969 | MS.gene82521:intron | 35.0% | |
CGCCATCCTGAAAATTATAT+CGG | - | chr5.2:15392784-15392803 | None:intergenic | 35.0% | |
CTAAAATGAGGGATCAAAAG+TGG | + | chr5.2:15389962-15389981 | MS.gene82521:intron | 35.0% | |
GAGAAGGAAAAAAGGAAACA+TGG | - | chr5.2:15390620-15390639 | None:intergenic | 35.0% | |
GAGAGACATATAGTTGTACA+AGG | + | chr5.2:15392976-15392995 | MS.gene82521:CDS | 35.0% | |
GCATATAATACACCAAATGG+TGG | + | chr5.2:15391717-15391736 | MS.gene82521:intron | 35.0% | |
GCTAGAAAATTGTTTCCGTT+TGG | + | chr5.2:15393364-15393383 | MS.gene82521:CDS | 35.0% | |
GCTGCATATAATACACCAAA+TGG | + | chr5.2:15391714-15391733 | MS.gene82521:intron | 35.0% | |
GTCACGATTTATTCAAATCG+GGG | - | chr5.2:15389727-15389746 | None:intergenic | 35.0% | |
GTTTCTCACCATGAATGTTT+AGG | - | chr5.2:15392372-15392391 | None:intergenic | 35.0% | |
TATCTACCTTCAAAAGACAC+TGG | - | chr5.2:15390553-15390572 | None:intergenic | 35.0% | |
TTAATTTCAATGGGGTTTGC+AGG | + | chr5.2:15393508-15393527 | MS.gene82521:intron | 35.0% | |
TTCCCTCCATTCAAAAAATG+TGG | - | chr5.2:15389240-15389259 | None:intergenic | 35.0% | |
TTCTTGCTCCTAAACATTCA+TGG | + | chr5.2:15392361-15392380 | MS.gene82521:CDS | 35.0% | |
! | AAAAAGAGGCATGTAAAGCT+AGG | + | chr5.2:15393859-15393878 | MS.gene82521:CDS | 35.0% |
! | AAGGCTCAGATAGATACTTT+TGG | + | chr5.2:15393013-15393032 | MS.gene82521:CDS | 35.0% |
! | CACTTTTGATCCCTCATTTT+AGG | - | chr5.2:15389964-15389983 | None:intergenic | 35.0% |
! | CATCCAAGGCATTAAAGAAA+TGG | + | chr5.2:15393824-15393843 | MS.gene82521:CDS | 35.0% |
! | GTGGTGATAGAAAACTTTTG+GGG | + | chr5.2:15389981-15390000 | MS.gene82521:intron | 35.0% |
! | TCAGAGCTCATACAAGTTTT+TGG | + | chr5.2:15391457-15391476 | MS.gene82521:CDS | 35.0% |
! | TCTTGTTTGTGTCTCTTCTA+TGG | + | chr5.2:15387776-15387795 | MS.gene82521:CDS | 35.0% |
!! | CAAGACAATTTGTTATGCCA+CGG | - | chr5.2:15388138-15388157 | None:intergenic | 35.0% |
!! | CCTCATTTTAGGTGTTTGTT+TGG | - | chr5.2:15389953-15389972 | None:intergenic | 35.0% |
!! | CTCATACAAGTTTTTGGACT+AGG | + | chr5.2:15391463-15391482 | MS.gene82521:CDS | 35.0% |
!! | GAACCACTTTTATCTGTGAA+TGG | + | chr5.2:15391004-15391023 | MS.gene82521:CDS | 35.0% |
!! | GTTCCACTAAATATTTTGGG+AGG | + | chr5.2:15388217-15388236 | MS.gene82521:intron | 35.0% |
!! | TCACGTTTTGTTGGAAATCA+AGG | - | chr5.2:15389915-15389934 | None:intergenic | 35.0% |
!!! | CAACCACATTTTTTGAATGG+AGG | + | chr5.2:15389234-15389253 | MS.gene82521:intron | 35.0% |
!!! | TTGCAGATAATTTTGGCTGT+TGG | + | chr5.2:15392907-15392926 | MS.gene82521:intron | 35.0% |
AAAACTCTTCTCAAGGGCTA+TGG | - | chr5.2:15387912-15387931 | None:intergenic | 40.0% | |
AACAAACATTAAGGGCAACC+CGG | - | chr5.2:15391784-15391803 | None:intergenic | 40.0% | |
AACACGATCTTCAACCTTTG+AGG | + | chr5.2:15393981-15394000 | MS.gene82521:CDS | 40.0% | |
AACAGCCTCTTGTGTAAAAC+AGG | + | chr5.2:15391686-15391705 | MS.gene82521:intron | 40.0% | |
AATGCTTCTTGGAAGACTCA+AGG | + | chr5.2:15391093-15391112 | MS.gene82521:CDS | 40.0% | |
ACAGCCTCTTGTGTAAAACA+GGG | + | chr5.2:15391687-15391706 | MS.gene82521:intron | 40.0% | |
ACTTGATCAAACACCGACAT+GGG | + | chr5.2:15387850-15387869 | MS.gene82521:CDS | 40.0% | |
AGAAACCAGATTAGCAAGAC+GGG | - | chr5.2:15391516-15391535 | None:intergenic | 40.0% | |
AGACTGCTAGGAAGAATATG+AGG | - | chr5.2:15391048-15391067 | None:intergenic | 40.0% | |
AGCCTACAAATGTATTGGAC+CGG | - | chr5.2:15388244-15388263 | None:intergenic | 40.0% | |
ATAGAATTTATGGAGGGACG+AGG | + | chr5.2:15392676-15392695 | MS.gene82521:intron | 40.0% | |
ATGAGCAAGAAGCAGAAGAT+AGG | + | chr5.2:15394073-15394092 | MS.gene82521:CDS | 40.0% | |
ATTTACTTCCAGGAGCTAGA+TGG | - | chr5.2:15392148-15392167 | None:intergenic | 40.0% | |
CGTGTTACAATTACTGTGCA+TGG | - | chr5.2:15389800-15389819 | None:intergenic | 40.0% | |
CTCTTGTGTAAAACAGGGTA+AGG | + | chr5.2:15391692-15391711 | MS.gene82521:intron | 40.0% | |
CTGCATTGTTGATCCAACAA+TGG | - | chr5.2:15393917-15393936 | None:intergenic | 40.0% | |
CTTCACCGTTTCAAAACTAC+CGG | + | chr5.2:15393952-15393971 | MS.gene82521:CDS | 40.0% | |
CTTCTATGGAGGTTTATCCA+TGG | + | chr5.2:15387790-15387809 | MS.gene82521:CDS | 40.0% | |
GAGAAACCAGATTAGCAAGA+CGG | - | chr5.2:15391517-15391536 | None:intergenic | 40.0% | |
GAGGAAGAGACTTTAACTCA+TGG | + | chr5.2:15391236-15391255 | MS.gene82521:CDS | 40.0% | |
GAGGGACTAAAACGAAAAGT+TGG | + | chr5.2:15390027-15390046 | MS.gene82521:intron | 40.0% | |
GTCATGTGACTGAAAAGTCA+CGG | + | chr5.2:15391649-15391668 | MS.gene82521:intron | 40.0% | |
GTCCCTATAACCAGTTAACT+TGG | - | chr5.2:15390982-15391001 | None:intergenic | 40.0% | |
TAAATCCATTGCGCAAAGTC+TGG | - | chr5.2:15391958-15391977 | None:intergenic | 40.0% | |
TAGGTGTTTGTTTGGATGTG+CGG | - | chr5.2:15389945-15389964 | None:intergenic | 40.0% | |
TCATGTGACTGAAAAGTCAC+GGG | + | chr5.2:15391650-15391669 | MS.gene82521:intron | 40.0% | |
TCTACTATAGGAACCATGGA+TGG | + | chr5.2:15393886-15393905 | MS.gene82521:CDS | 40.0% | |
TGGCAAGCTTATAGTCCAAA+CGG | - | chr5.2:15393382-15393401 | None:intergenic | 40.0% | |
TGTTTGTGTCTCTTCTATGG+AGG | + | chr5.2:15387779-15387798 | MS.gene82521:CDS | 40.0% | |
TTTAAACAGTCCTGTCCTCT+GGG | + | chr5.2:15392324-15392343 | MS.gene82521:intron | 40.0% | |
! | AGGAAACCAGTGTCTTTTGA+AGG | + | chr5.2:15390544-15390563 | MS.gene82521:CDS | 40.0% |
! | ATCTAGGAGGCGCAAATTTA+TGG | + | chr5.2:15392707-15392726 | MS.gene82521:intron | 40.0% |
! | ATTGAAGTTTTCTCTTGCCG+TGG | + | chr5.2:15388118-15388137 | MS.gene82521:intron | 40.0% |
! | CAATCATGTAGATGGGTTCT+AGG | + | chr5.2:15393773-15393792 | MS.gene82521:intron | 40.0% |
! | CTTACCCTGTTTTACACAAG+AGG | - | chr5.2:15391694-15391713 | None:intergenic | 40.0% |
! | GTTTTATAGGTCTGTGCGTA+AGG | + | chr5.2:15391925-15391944 | MS.gene82521:CDS | 40.0% |
! | TCTAGGAGGCGCAAATTTAT+GGG | + | chr5.2:15392708-15392727 | MS.gene82521:intron | 40.0% |
! | TTTGGAGCTTCGCAAAATCA+CGG | + | chr5.2:15390836-15390855 | MS.gene82521:intron | 40.0% |
! | TTTTAAACAGTCCTGTCCTC+TGG | + | chr5.2:15392323-15392342 | MS.gene82521:intron | 40.0% |
!! | ACTAAATATTTTGGGAGGGC+CGG | + | chr5.2:15388222-15388241 | MS.gene82521:intron | 40.0% |
!! | AGAAAACTTTTGGGGACTAG+AGG | + | chr5.2:15389989-15390008 | MS.gene82521:intron | 40.0% |
!! | GCATGTAGGACATTGATTTG+TGG | + | chr5.2:15388426-15388445 | MS.gene82521:intron | 40.0% |
!! | GCCCTACTAGAAGTGTATTT+TGG | + | chr5.2:15390755-15390774 | MS.gene82521:intron | 40.0% |
!! | GTGCCATTTCTTTAATGCCT+TGG | - | chr5.2:15393830-15393849 | None:intergenic | 40.0% |
!! | TCTGCTTGAAGCTCTAGAAA+AGG | + | chr5.2:15390220-15390239 | MS.gene82521:CDS | 40.0% |
!! | TGAAGCTCTAGAAAAGGTCA+AGG | + | chr5.2:15390226-15390245 | MS.gene82521:CDS | 40.0% |
!!! | GTTTTGTTTCTGCAGATACG+TGG | + | chr5.2:15391200-15391219 | MS.gene82521:intron | 40.0% |
AAAGTCACGGGTTCAAGTCA+TGG | + | chr5.2:15391662-15391681 | MS.gene82521:intron | 45.0% | |
AGAAGATAGGCATCACAGTG+AGG | + | chr5.2:15394086-15394105 | MS.gene82521:CDS | 45.0% | |
AGATACGTGGATGGAAGGAA+TGG | + | chr5.2:15391213-15391232 | MS.gene82521:intron | 45.0% | |
AGATGACTTCAAGGTAGTCG+TGG | + | chr5.2:15392202-15392221 | MS.gene82521:CDS | 45.0% | |
AGGATGGCGTACTCCAATAT+GGG | + | chr5.2:15392795-15392814 | MS.gene82521:intron | 45.0% | |
AGGTTGAAGATCGTGTTGAG+TGG | - | chr5.2:15393978-15393997 | None:intergenic | 45.0% | |
AGTGCTGTCACAATGCTTCT+TGG | + | chr5.2:15391082-15391101 | MS.gene82521:CDS | 45.0% | |
ATAATATGTAGGGACCGGGT+CGG | - | chr5.2:15389419-15389438 | None:intergenic | 45.0% | |
ATGGATGGTAGCACCATTGT+TGG | + | chr5.2:15393901-15393920 | MS.gene82521:CDS | 45.0% | |
ATTGCTGCCAAACTAGCACA+AGG | - | chr5.2:15392503-15392522 | None:intergenic | 45.0% | |
CAAGGAATGCCTCTTGTTCA+AGG | + | chr5.2:15392994-15393013 | MS.gene82521:CDS | 45.0% | |
CACTTGATCAAACACCGACA+TGG | + | chr5.2:15387849-15387868 | MS.gene82521:CDS | 45.0% | |
CATGGTTATGAGTTCGCCAA+TGG | + | chr5.2:15391254-15391273 | MS.gene82521:CDS | 45.0% | |
CGAGGAGAACTAAATCTAGG+AGG | + | chr5.2:15392694-15392713 | MS.gene82521:intron | 45.0% | |
CTATCTGAGCCTTGAACAAG+AGG | - | chr5.2:15393006-15393025 | None:intergenic | 45.0% | |
CTGCAACTGCAAGTGATAGT+AGG | + | chr5.2:15387813-15387832 | MS.gene82521:CDS | 45.0% | |
CTTGATCAAACACCGACATG+GGG | + | chr5.2:15387851-15387870 | MS.gene82521:CDS | 45.0% | |
GAAGATAGGCATCACAGTGA+GGG | + | chr5.2:15394087-15394106 | MS.gene82521:CDS | 45.0% | |
GACGGGACGCACAATATAAA+AGG | - | chr5.2:15391499-15391518 | None:intergenic | 45.0% | |
GATACGTGGATGGAAGGAAT+GGG | + | chr5.2:15391214-15391233 | MS.gene82521:intron | 45.0% | |
GATGACTTCAAGGTAGTCGT+GGG | + | chr5.2:15392203-15392222 | MS.gene82521:CDS | 45.0% | |
GATTACCAGACTTTGCGCAA+TGG | + | chr5.2:15391950-15391969 | MS.gene82521:CDS | 45.0% | |
GGAATCAAGGATGCCCATAT+TGG | - | chr5.2:15392811-15392830 | None:intergenic | 45.0% | |
GGACGAGGAGAACTAAATCT+AGG | + | chr5.2:15392691-15392710 | MS.gene82521:intron | 45.0% | |
GGCACATGACTGTGAAAAAG+AGG | + | chr5.2:15393845-15393864 | MS.gene82521:CDS | 45.0% | |
GGCCCTCCCAAAATATTTAG+TGG | - | chr5.2:15388223-15388242 | None:intergenic | 45.0% | |
GTGCAGATGCTGCAAAATTC+AGG | + | chr5.2:15391412-15391431 | MS.gene82521:intron | 45.0% | |
TACCTTCCTGCTGCATTTGA+AGG | - | chr5.2:15390596-15390615 | None:intergenic | 45.0% | |
TAGCACTCCTTGTGCTAGTT+TGG | + | chr5.2:15392493-15392512 | MS.gene82521:intron | 45.0% | |
TTCCTGCTGCATTTGAAGGA+GGG | - | chr5.2:15390592-15390611 | None:intergenic | 45.0% | |
TTCTGCAACAACAATTGCGC+AGG | - | chr5.2:15392033-15392052 | None:intergenic | 45.0% | |
! | GTGCTAGTTTGGCAGCAATT+TGG | + | chr5.2:15392504-15392523 | MS.gene82521:intron | 45.0% |
! | TATATGTGTCGTGTCGGTGT+CGG | + | chr5.2:15393633-15393652 | MS.gene82521:intron | 45.0% |
! | TGACAGCCTCCCCATATTTT+AGG | + | chr5.2:15388952-15388971 | MS.gene82521:intron | 45.0% |
! | TGGTGCACGACATTTTTACG+AGG | - | chr5.2:15391855-15391874 | None:intergenic | 45.0% |
! | TGTTTCTGCAGATACGTGGA+TGG | + | chr5.2:15391204-15391223 | MS.gene82521:intron | 45.0% |
!! | AACAATGGTGCTACCATCCA+TGG | - | chr5.2:15393902-15393921 | None:intergenic | 45.0% |
!! | AACTTTTGGGGACTAGAGGT+TGG | + | chr5.2:15389993-15390012 | MS.gene82521:intron | 45.0% |
!! | TAGCACAAGGAGTGCTAGAA+CGG | - | chr5.2:15392490-15392509 | None:intergenic | 45.0% |
!!! | AGTGGCCGGTAGTTTTGAAA+CGG | - | chr5.2:15393960-15393979 | None:intergenic | 45.0% |
!!! | GTTTTGAAACGGTGAAGTGC+TGG | - | chr5.2:15393949-15393968 | None:intergenic | 45.0% |
!! | AATTATTATTATGAAATAAA+GGG | - | chr5.2:15388191-15388210 | None:intergenic | 5.0% |
!! | TAATTATTATTATGAAATAA+AGG | - | chr5.2:15388192-15388211 | None:intergenic | 5.0% |
!! | TTATTTCATAATAATAATTA+TGG | + | chr5.2:15388192-15388211 | MS.gene82521:intron | 5.0% |
AAACTACAGCTGATGCCCAG+AGG | - | chr5.2:15392342-15392361 | None:intergenic | 50.0% | |
ACAACTTTACCAGTTGCGCC+AGG | - | chr5.2:15391628-15391647 | None:intergenic | 50.0% | |
ATCACTTGCAGTTGCAGCCA+TGG | - | chr5.2:15387810-15387829 | None:intergenic | 50.0% | |
CAGGATGGCGTACTCCAATA+TGG | + | chr5.2:15392794-15392813 | MS.gene82521:intron | 50.0% | |
CTCCTTCAAATGCAGCAGGA+AGG | + | chr5.2:15390591-15390610 | MS.gene82521:CDS | 50.0% | |
CTTCCTGCTGCATTTGAAGG+AGG | - | chr5.2:15390593-15390612 | None:intergenic | 50.0% | |
GAAGGGTAATGTAGCTGCAG+AGG | - | chr5.2:15393548-15393567 | None:intergenic | 50.0% | |
GGATAATCTGTGATCCGACC+CGG | + | chr5.2:15389402-15389421 | MS.gene82521:intron | 50.0% | |
GGCCGGTCCAATACATTTGT+AGG | + | chr5.2:15388239-15388258 | MS.gene82521:intron | 50.0% | |
TCAAGGTAGTCGTGGGAGTA+AGG | + | chr5.2:15392210-15392229 | MS.gene82521:CDS | 50.0% | |
TCGGGGCACAATTTGAAGAG+CGG | - | chr5.2:15389710-15389729 | None:intergenic | 50.0% | |
TCTGCAGATACGTGGATGGA+AGG | + | chr5.2:15391208-15391227 | MS.gene82521:intron | 50.0% | |
TGAAGATCGTGTTGAGTGGC+CGG | - | chr5.2:15393974-15393993 | None:intergenic | 50.0% | |
TGTTTAAGTCCTGGCGCAAC+TGG | + | chr5.2:15391616-15391635 | MS.gene82521:intron | 50.0% | |
! | CTTTTACGCTGACACAGCTG+CGG | + | chr5.2:15392063-15392082 | MS.gene82521:intron | 50.0% |
! | GGCTGCAACTCACGTTTTGT+TGG | - | chr5.2:15389924-15389943 | None:intergenic | 50.0% |
! | GTATAGGTCCATCTAGCTCC+TGG | + | chr5.2:15392137-15392156 | MS.gene82521:intron | 50.0% |
!! | GCTCTAGAAAAGGTCAAGGC+TGG | + | chr5.2:15390230-15390249 | MS.gene82521:CDS | 50.0% |
ACACGACATGTGTCCGACAC+TGG | + | chr5.2:15393656-15393675 | MS.gene82521:intron | 55.0% | |
ACAGCAGCAACACCCCATGT+CGG | - | chr5.2:15387866-15387885 | None:intergenic | 55.0% | |
ACGTGGATGGAAGGAATGGG+AGG | + | chr5.2:15391217-15391236 | MS.gene82521:CDS | 55.0% | |
ACTAGAGCTCCCGCATATGC+AGG | - | chr5.2:15391758-15391777 | None:intergenic | 55.0% | |
ATGTGTCCGACACTGGGACA+CGG | + | chr5.2:15393663-15393682 | MS.gene82521:intron | 55.0% | |
CACGACATGTGTCCGACACT+GGG | + | chr5.2:15393657-15393676 | MS.gene82521:intron | 55.0% | |
CTAGAGCTCCCGCATATGCA+GGG | - | chr5.2:15391757-15391776 | None:intergenic | 55.0% | |
CTCCCTCCTTCAAATGCAGC+AGG | + | chr5.2:15390587-15390606 | MS.gene82521:CDS | 55.0% | |
GGATCAACAATGCAGTCCCC+TGG | + | chr5.2:15393922-15393941 | MS.gene82521:CDS | 55.0% | |
TGCGTCCCGTCTTGCTAATC+TGG | + | chr5.2:15391508-15391527 | MS.gene82521:intron | 55.0% | |
! | CAAATGGTGGGACTCCTTCC+CGG | + | chr5.2:15391730-15391749 | MS.gene82521:intron | 55.0% |
! | GATTAGCCGTGTCCCAGTGT+CGG | - | chr5.2:15393672-15393691 | None:intergenic | 55.0% |
!! | AAACGGTGAAGTGCTGGTCC+AGG | - | chr5.2:15393943-15393962 | None:intergenic | 55.0% |
!! | AACGGTGAAGTGCTGGTCCA+GGG | - | chr5.2:15393942-15393961 | None:intergenic | 55.0% |
ACAGCTGATGCCCAGAGGAC+AGG | - | chr5.2:15392337-15392356 | None:intergenic | 60.0% | |
CGGGAAGGAGTCCCACCATT+TGG | - | chr5.2:15391732-15391751 | None:intergenic | 60.0% | |
CTTCCCGGACCCTGCATATG+CGG | + | chr5.2:15391745-15391764 | MS.gene82521:intron | 60.0% | |
TTCCCGGACCCTGCATATGC+GGG | + | chr5.2:15391746-15391765 | MS.gene82521:intron | 60.0% | |
! | ATGCGGGAGCTCTAGTGCAC+CGG | + | chr5.2:15391762-15391781 | MS.gene82521:intron | 60.0% |
!! | ACGGTGAAGTGCTGGTCCAG+GGG | - | chr5.2:15393941-15393960 | None:intergenic | 60.0% |
CGCATATGCAGGGTCCGGGA+AGG | - | chr5.2:15391747-15391766 | None:intergenic | 65.0% | |
CGCTGACACAGCTGCGGTTG+TGG | + | chr5.2:15392069-15392088 | MS.gene82521:intron | 65.0% | |
CTCCCGCATATGCAGGGTCC+GGG | - | chr5.2:15391751-15391770 | None:intergenic | 65.0% | |
GCTCCCGCATATGCAGGGTC+CGG | - | chr5.2:15391752-15391771 | None:intergenic | 65.0% | |
! | TGCGGGAGCTCTAGTGCACC+GGG | + | chr5.2:15391763-15391782 | MS.gene82521:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.2 | gene | 15387758 | 15394167 | 15387758 | ID=MS.gene82521 |
chr5.2 | mRNA | 15387758 | 15394167 | 15387758 | ID=MS.gene82521.t1;Parent=MS.gene82521 |
chr5.2 | exon | 15387758 | 15387946 | 15387758 | ID=MS.gene82521.t1.exon1;Parent=MS.gene82521.t1 |
chr5.2 | CDS | 15387758 | 15387946 | 15387758 | ID=cds.MS.gene82521.t1;Parent=MS.gene82521.t1 |
chr5.2 | exon | 15390194 | 15390251 | 15390194 | ID=MS.gene82521.t1.exon2;Parent=MS.gene82521.t1 |
chr5.2 | CDS | 15390194 | 15390251 | 15390194 | ID=cds.MS.gene82521.t1;Parent=MS.gene82521.t1 |
chr5.2 | exon | 15390386 | 15390612 | 15390386 | ID=MS.gene82521.t1.exon3;Parent=MS.gene82521.t1 |
chr5.2 | CDS | 15390386 | 15390612 | 15390386 | ID=cds.MS.gene82521.t1;Parent=MS.gene82521.t1 |
chr5.2 | exon | 15390998 | 15391114 | 15390998 | ID=MS.gene82521.t1.exon4;Parent=MS.gene82521.t1 |
chr5.2 | CDS | 15390998 | 15391114 | 15390998 | ID=cds.MS.gene82521.t1;Parent=MS.gene82521.t1 |
chr5.2 | exon | 15391215 | 15391275 | 15391215 | ID=MS.gene82521.t1.exon5;Parent=MS.gene82521.t1 |
chr5.2 | CDS | 15391215 | 15391275 | 15391215 | ID=cds.MS.gene82521.t1;Parent=MS.gene82521.t1 |
chr5.2 | exon | 15391418 | 15391506 | 15391418 | ID=MS.gene82521.t1.exon6;Parent=MS.gene82521.t1 |
chr5.2 | CDS | 15391418 | 15391506 | 15391418 | ID=cds.MS.gene82521.t1;Parent=MS.gene82521.t1 |
chr5.2 | exon | 15391908 | 15391982 | 15391908 | ID=MS.gene82521.t1.exon7;Parent=MS.gene82521.t1 |
chr5.2 | CDS | 15391908 | 15391982 | 15391908 | ID=cds.MS.gene82521.t1;Parent=MS.gene82521.t1 |
chr5.2 | exon | 15392143 | 15392231 | 15392143 | ID=MS.gene82521.t1.exon8;Parent=MS.gene82521.t1 |
chr5.2 | CDS | 15392143 | 15392231 | 15392143 | ID=cds.MS.gene82521.t1;Parent=MS.gene82521.t1 |
chr5.2 | exon | 15392333 | 15392382 | 15392333 | ID=MS.gene82521.t1.exon9;Parent=MS.gene82521.t1 |
chr5.2 | CDS | 15392333 | 15392382 | 15392333 | ID=cds.MS.gene82521.t1;Parent=MS.gene82521.t1 |
chr5.2 | exon | 15392797 | 15392837 | 15392797 | ID=MS.gene82521.t1.exon10;Parent=MS.gene82521.t1 |
chr5.2 | CDS | 15392797 | 15392837 | 15392797 | ID=cds.MS.gene82521.t1;Parent=MS.gene82521.t1 |
chr5.2 | exon | 15392913 | 15393086 | 15392913 | ID=MS.gene82521.t1.exon11;Parent=MS.gene82521.t1 |
chr5.2 | CDS | 15392913 | 15393086 | 15392913 | ID=cds.MS.gene82521.t1;Parent=MS.gene82521.t1 |
chr5.2 | exon | 15393178 | 15393213 | 15393178 | ID=MS.gene82521.t1.exon12;Parent=MS.gene82521.t1 |
chr5.2 | CDS | 15393178 | 15393213 | 15393178 | ID=cds.MS.gene82521.t1;Parent=MS.gene82521.t1 |
chr5.2 | exon | 15393353 | 15393420 | 15393353 | ID=MS.gene82521.t1.exon13;Parent=MS.gene82521.t1 |
chr5.2 | CDS | 15393353 | 15393420 | 15393353 | ID=cds.MS.gene82521.t1;Parent=MS.gene82521.t1 |
chr5.2 | exon | 15393530 | 15393590 | 15393530 | ID=MS.gene82521.t1.exon14;Parent=MS.gene82521.t1 |
chr5.2 | CDS | 15393530 | 15393590 | 15393530 | ID=cds.MS.gene82521.t1;Parent=MS.gene82521.t1 |
chr5.2 | exon | 15393784 | 15394167 | 15393784 | ID=MS.gene82521.t1.exon15;Parent=MS.gene82521.t1 |
chr5.2 | CDS | 15393784 | 15394167 | 15393784 | ID=cds.MS.gene82521.t1;Parent=MS.gene82521.t1 |
Gene Sequence |
Protein sequence |