Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene83508.t1 | XP_004486584.1 | 90.1 | 835 | 82 | 1 | 1 | 835 | 258 | 1091 | 0.00E+00 | 1458.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene83508.t1 | Q9LU41 | 80.0 | 837 | 164 | 2 | 1 | 835 | 251 | 1086 | 0.0e+00 | 1292.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene83508.t1 | A0A1S2XB13 | 90.1 | 835 | 82 | 1 | 1 | 835 | 258 | 1091 | 0.0e+00 | 1458.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049609 | MS.gene83508 | 0.808871 | 2.50E-50 | -1.69E-46 |
MS.gene050538 | MS.gene83508 | 0.803052 | 4.19E-49 | -1.69E-46 |
MS.gene050747 | MS.gene83508 | 0.816225 | 6.17E-52 | -1.69E-46 |
MS.gene051666 | MS.gene83508 | 0.81422 | 1.72E-51 | -1.69E-46 |
MS.gene051838 | MS.gene83508 | 0.816567 | 5.17E-52 | -1.69E-46 |
MS.gene052134 | MS.gene83508 | 0.80303 | 4.23E-49 | -1.69E-46 |
MS.gene052135 | MS.gene83508 | 0.801754 | 7.76E-49 | -1.69E-46 |
MS.gene052501 | MS.gene83508 | 0.854028 | 1.62E-61 | -1.69E-46 |
MS.gene052503 | MS.gene83508 | 0.830362 | 3.07E-55 | -1.69E-46 |
MS.gene052505 | MS.gene83508 | 0.852538 | 4.32E-61 | -1.69E-46 |
MS.gene052823 | MS.gene83508 | 0.829888 | 4.00E-55 | -1.69E-46 |
MS.gene052825 | MS.gene83508 | 0.833456 | 5.28E-56 | -1.69E-46 |
MS.gene052982 | MS.gene83508 | 0.815638 | 8.34E-52 | -1.69E-46 |
MS.gene053632 | MS.gene83508 | 0.803824 | 2.90E-49 | -1.69E-46 |
MS.gene053873 | MS.gene83508 | 0.813074 | 3.08E-51 | -1.69E-46 |
MS.gene054927 | MS.gene83508 | 0.820209 | 7.74E-53 | -1.69E-46 |
MS.gene055289 | MS.gene83508 | 0.83676 | 7.75E-57 | -1.69E-46 |
MS.gene05664 | MS.gene83508 | 0.803398 | 3.55E-49 | -1.69E-46 |
MS.gene057048 | MS.gene83508 | 0.838816 | 2.30E-57 | -1.69E-46 |
MS.gene057310 | MS.gene83508 | 0.809826 | 1.56E-50 | -1.69E-46 |
MS.gene057658 | MS.gene83508 | 0.823502 | 1.34E-53 | -1.69E-46 |
MS.gene058376 | MS.gene83508 | 0.808399 | 3.16E-50 | -1.69E-46 |
MS.gene059667 | MS.gene83508 | 0.807308 | 5.39E-50 | -1.69E-46 |
MS.gene060804 | MS.gene83508 | 0.80143 | 9.04E-49 | -1.69E-46 |
MS.gene060835 | MS.gene83508 | 0.800489 | 1.41E-48 | -1.69E-46 |
MS.gene06092 | MS.gene83508 | 0.809183 | 2.15E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 184 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTCTTTCCTTCAATTATATT+TGG | 0.147809 | 2.2:-154450 | None:intergenic |
AGCTGGCCACTTGCGGTTAT+TGG | 0.177695 | 2.2:+160009 | MS.gene83508:intron |
TATTGTTCTGCCACCTCTTA+TGG | 0.202565 | 2.2:-149873 | None:intergenic |
GCTTGCTATTGTTGGAATAA+AGG | 0.215647 | 2.2:+153830 | MS.gene83508:CDS |
GACCATTTGAATCAAGATAT+TGG | 0.223991 | 2.2:-153339 | None:intergenic |
GGCAGATATTGGTCTTTCTA+TGG | 0.224456 | 2.2:+156625 | MS.gene83508:intron |
CACAGAACCCACCTGGTTTA+AGG | 0.226494 | 2.2:-151558 | None:intergenic |
AAAAGTGCAATTTGTTTATA+AGG | 0.233374 | 2.2:+151014 | MS.gene83508:CDS |
GGCTTGCTTGTATTGGTATT+GGG | 0.243098 | 2.2:+159841 | MS.gene83508:CDS |
TTTATCAGAGATAAAACTTC+TGG | 0.259929 | 2.2:-152517 | None:intergenic |
TTATCAAGTGACTGTTCTTC+TGG | 0.265845 | 2.2:+158970 | MS.gene83508:CDS |
TGGCTTGCTTGTATTGGTAT+TGG | 0.266103 | 2.2:+159840 | MS.gene83508:CDS |
TTGAAGACATTCATCCCTTC+TGG | 0.271934 | 2.2:-159612 | None:intergenic |
CTTCTGGTTCTTAACTTTGC+TGG | 0.278588 | 2.2:+158986 | MS.gene83508:CDS |
AACAGCAAAAGCAATATCTT+TGG | 0.288794 | 2.2:+154389 | MS.gene83508:CDS |
CCATAGGTACGCATGGTTAC+TGG | 0.302874 | 2.2:+154354 | MS.gene83508:intron |
GGACCGTGACATTGGTGTTT+TGG | 0.311444 | 2.2:-160049 | None:intergenic |
ATCTTTGGAGTGTGGAATAC+TGG | 0.312882 | 2.2:+154404 | MS.gene83508:CDS |
CTCTGTATAGGTTGTTCGTT+GGG | 0.314608 | 2.2:+157897 | MS.gene83508:intron |
CAACAACAGTGAGGCTGAAT+TGG | 0.325866 | 2.2:+159811 | MS.gene83508:CDS |
CCCCAAGTGTGTCCATAATA+AGG | 0.332247 | 2.2:-158148 | None:intergenic |
ACCATTTGAATCAAGATATT+GGG | 0.335827 | 2.2:-153338 | None:intergenic |
CACATGATATTTGTTATAAG+AGG | 0.341177 | 2.2:-158817 | None:intergenic |
CAGAGAAGGCAATTCTATCT+TGG | 0.348365 | 2.2:+152846 | MS.gene83508:CDS |
CACACTTGGGGCTCTTGCTC+TGG | 0.351661 | 2.2:+158160 | MS.gene83508:CDS |
GGTACCTGTACTGCGGTTAA+AGG | 0.364061 | 2.2:-158027 | None:intergenic |
CAGCAGTGGCTTGCTTGTAT+TGG | 0.367797 | 2.2:+159834 | MS.gene83508:CDS |
GGAGCTGCTGAGATAGTTCT+AGG | 0.368306 | 2.2:+153307 | MS.gene83508:CDS |
AGCTGTTCTTGTAATTCTCT+TGG | 0.369724 | 2.2:+150862 | MS.gene83508:CDS |
GGTGGAGAGACAGAGATTTC+AGG | 0.376223 | 2.2:+152815 | MS.gene83508:CDS |
TAGCAATACAACGCAAGCTC+TGG | 0.377450 | 2.2:-153719 | None:intergenic |
ACAATTTGCAGTGATAAAAC+TGG | 0.384215 | 2.2:+151527 | MS.gene83508:CDS |
TCTGTGGGTCAACCTTATTA+TGG | 0.387459 | 2.2:+158136 | MS.gene83508:CDS |
GTATTGGTATTGGGCTGGTC+AGG | 0.406693 | 2.2:+159850 | MS.gene83508:CDS |
AAGATCGACAAAGTTGTAGA+AGG | 0.407776 | 2.2:+151042 | MS.gene83508:CDS |
ATGCACTGAGGCTGGTGTTA+AGG | 0.409083 | 2.2:+154153 | MS.gene83508:CDS |
GATGTACTGCCCCTTAAAAT+AGG | 0.413548 | 2.2:+149926 | MS.gene83508:CDS |
CTTGCTTTCACCAGTCATGC+TGG | 0.415814 | 2.2:-150090 | None:intergenic |
TTCCATCTGAACCCGTTGTA+TGG | 0.416479 | 2.2:-150993 | None:intergenic |
TGCATACAGATCATACGAAT+TGG | 0.416624 | 2.2:+153743 | MS.gene83508:CDS |
CATAGGTACGCATGGTTACT+GGG | 0.423374 | 2.2:+154355 | MS.gene83508:intron |
TGCTTGTATTGGTATTGGGC+TGG | 0.426575 | 2.2:+159845 | MS.gene83508:CDS |
AATCCAAACCTTCGGCCAAC+TGG | 0.426755 | 2.2:-158221 | None:intergenic |
TGTCAGCTGTCAGTGATTAT+CGG | 0.427228 | 2.2:+149712 | None:intergenic |
ACTGCTAAAGGTAAACCTTC+TGG | 0.428353 | 2.2:-151206 | None:intergenic |
ACGAGCAAAAGCTTGTCATT+TGG | 0.433062 | 2.2:-154723 | None:intergenic |
CATCTCTTCGTCGGAATTGT+GGG | 0.434154 | 2.2:+159651 | MS.gene83508:CDS |
GCCCCTTAAAATAGGAGATC+AGG | 0.435686 | 2.2:+149934 | MS.gene83508:CDS |
ACCTTATTATGGACACACTT+GGG | 0.437303 | 2.2:+158147 | MS.gene83508:CDS |
GTTGAGCCAAATATAATTGA+AGG | 0.442682 | 2.2:+154444 | MS.gene83508:CDS |
GCTGTTCTTGTAATTCTCTT+GGG | 0.443989 | 2.2:+150863 | MS.gene83508:CDS |
CACGTTAAGGTAACTGCTAA+AGG | 0.453830 | 2.2:-151218 | None:intergenic |
CCATCTCTTCGTCGGAATTG+TGG | 0.457450 | 2.2:+159650 | MS.gene83508:CDS |
GGTCCATCTTGAGGGTGTTT+AGG | 0.459145 | 2.2:+160067 | MS.gene83508:CDS |
AAGCTCAGATATTATAATCC+TGG | 0.460795 | 2.2:+156676 | MS.gene83508:CDS |
GTTGTGGCAGCTATATCTTC+TGG | 0.465186 | 2.2:+157997 | MS.gene83508:CDS |
ATGTAATAGGTACGATTGAA+TGG | 0.468073 | 2.2:+150797 | MS.gene83508:intron |
AGAGAAGGCAATTCTATCTT+GGG | 0.471873 | 2.2:+152847 | MS.gene83508:CDS |
TGTTCTTGGTACAGCTTCTG+TGG | 0.472745 | 2.2:+158120 | MS.gene83508:intron |
ATTCCGTGAACTCTCTGAAA+AGG | 0.476266 | 2.2:+154473 | MS.gene83508:CDS |
GCAGATATTGGTCTTTCTAT+GGG | 0.476274 | 2.2:+156626 | MS.gene83508:CDS |
AGGTGGTGTTGCTGTGAAAC+TGG | 0.476335 | 2.2:+153056 | MS.gene83508:CDS |
GTAGTTGAGGCATATGCTGC+TGG | 0.476524 | 2.2:+152451 | MS.gene83508:CDS |
ACCCAATATCTTGATTCAAA+TGG | 0.481495 | 2.2:+153337 | MS.gene83508:CDS |
GGCATAGCACAAAATACAAC+AGG | 0.482476 | 2.2:+152544 | MS.gene83508:CDS |
GGTGAAGTTGTTGCCGTCAC+AGG | 0.483379 | 2.2:+154765 | MS.gene83508:CDS |
GTCCAGGATCCTTGTCGCCC+TGG | 0.488772 | 2.2:+154109 | MS.gene83508:intron |
ATAATCATCATCGAGTTCCT+TGG | 0.489778 | 2.2:+159780 | MS.gene83508:CDS |
AGCAGAGCCCATGGTTTCGC+AGG | 0.490298 | 2.2:-151501 | None:intergenic |
TAATCATCATCGAGTTCCTT+GGG | 0.490653 | 2.2:+159781 | MS.gene83508:CDS |
CTCACAGCCTCTTTGACTCC+AGG | 0.492944 | 2.2:-154127 | None:intergenic |
TCGATATTTGAAATTGTCGT+TGG | 0.493395 | 2.2:+149902 | MS.gene83508:CDS |
TACTGAGTGGGGATTGTTGA+TGG | 0.494830 | 2.2:+150630 | MS.gene83508:CDS |
AACCTTATTATGGACACACT+TGG | 0.495271 | 2.2:+158146 | MS.gene83508:CDS |
AGCAAAACAAGTTCATGATC+GGG | 0.498072 | 2.2:-153810 | None:intergenic |
AACAAGTTCATGATCGGGTA+AGG | 0.500067 | 2.2:-153805 | None:intergenic |
ACTCTGTATAGGTTGTTCGT+TGG | 0.507514 | 2.2:+157896 | MS.gene83508:intron |
ATTGATGAATCCAGCATGAC+TGG | 0.508420 | 2.2:+150080 | MS.gene83508:CDS |
TTCTTGTAATTCTCTTGGGA+AGG | 0.509003 | 2.2:+150867 | MS.gene83508:CDS |
AACTTGCTACAGGCCATAAG+AGG | 0.509336 | 2.2:+149860 | MS.gene83508:intron |
ATACAGACCTCATGAAGAGC+AGG | 0.512825 | 2.2:-154807 | None:intergenic |
CAGAATTAAAGGGGAAGACA+TGG | 0.513590 | 2.2:-153023 | None:intergenic |
AATGTCACGGTCCATCTTGA+GGG | 0.515908 | 2.2:+160059 | MS.gene83508:CDS |
GTGGAGGAACTTGCTCGTAC+AGG | 0.517739 | 2.2:+158837 | MS.gene83508:CDS |
TGCTCTTACTATCAATGTTG+TGG | 0.518136 | 2.2:+157981 | MS.gene83508:CDS |
TCTTCAGGCATTCTTCAGAA+AGG | 0.520796 | 2.2:+153677 | MS.gene83508:intron |
GGCCATACAACGGGTTCAGA+TGG | 0.521920 | 2.2:+150991 | MS.gene83508:CDS |
CTGGTCTAAATCCTCCTCCT+TGG | 0.523223 | 2.2:-153778 | None:intergenic |
TCTAAATCCTCCTCCTTGGA+TGG | 0.523965 | 2.2:-153774 | None:intergenic |
CATGATCGGGTAAGGACCAC+TGG | 0.524660 | 2.2:-153797 | None:intergenic |
GATGATGGCAGACAAAGCTT+TGG | 0.524935 | 2.2:+151375 | MS.gene83508:CDS |
GCAAAATATATATAGGTGAT+GGG | 0.525791 | 2.2:+154690 | MS.gene83508:intron |
AATTCTATCTTGGGCTGTGA+AGG | 0.527622 | 2.2:+152856 | MS.gene83508:CDS |
TGAACTCTCTGAAAAGGAAA+GGG | 0.529194 | 2.2:+154479 | MS.gene83508:CDS |
TTCCAACAGCTGGCCACTTG+CGG | 0.529368 | 2.2:+160002 | MS.gene83508:intron |
AAGCAAAACAAGTTCATGAT+CGG | 0.529467 | 2.2:-153811 | None:intergenic |
AAAACAAAATATACAATTGG+AGG | 0.532555 | 2.2:+149767 | MS.gene83508:CDS |
GTGAGATTATGCACTGAGGC+TGG | 0.533419 | 2.2:+154145 | MS.gene83508:CDS |
GGTCTTTCTATGGGCATCCA+AGG | 0.533731 | 2.2:+156635 | MS.gene83508:CDS |
GTAATTAAAACTCCGTCAGC+AGG | 0.533732 | 2.2:-150041 | None:intergenic |
GCTATCAGCCTGCGAAACCA+TGG | 0.535109 | 2.2:+151493 | MS.gene83508:CDS |
CAATGTCACGGTCCATCTTG+AGG | 0.539876 | 2.2:+160058 | MS.gene83508:CDS |
CAGCAACATTTACAGTGAGC+TGG | 0.540367 | 2.2:-157960 | None:intergenic |
CAGAAAGGCAATTGATGACA+TGG | 0.540547 | 2.2:+153692 | MS.gene83508:CDS |
TGCATAAGACTGTCAGTTGG+TGG | 0.541880 | 2.2:-158191 | None:intergenic |
TGTTCCTTTAACCGCAGTAC+AGG | 0.543337 | 2.2:+158023 | MS.gene83508:CDS |
CTCAAGATGGACCGTGACAT+TGG | 0.543571 | 2.2:-160057 | None:intergenic |
ATACTCGATGCGGAAGATGA+TGG | 0.547026 | 2.2:+151360 | MS.gene83508:CDS |
CTGTTGTTGCAAACTTCCCA+AGG | 0.548024 | 2.2:-159797 | None:intergenic |
TGTTGGTATAAATACTGAGT+GGG | 0.550491 | 2.2:+150618 | MS.gene83508:CDS |
AGTCATGCTGGATTCATCAA+TGG | 0.551401 | 2.2:-150078 | None:intergenic |
GTGAACTCTCTGAAAAGGAA+AGG | 0.553286 | 2.2:+154478 | MS.gene83508:CDS |
CATCTGTAGGTAACTAGTGT+TGG | 0.554079 | 2.2:+150601 | MS.gene83508:intron |
CCTTATTATGGACACACTTG+GGG | 0.554597 | 2.2:+158148 | MS.gene83508:CDS |
AGCAATACAACGCAAGCTCT+GGG | 0.556701 | 2.2:-153718 | None:intergenic |
GTTGTTGCCGTCACAGGAGA+TGG | 0.557189 | 2.2:+154771 | MS.gene83508:CDS |
AGATGGAGTTGGTTCTATGC+TGG | 0.560327 | 2.2:+150245 | MS.gene83508:CDS |
GATAGAATTGCCTTCTCTGT+AGG | 0.561120 | 2.2:-152842 | None:intergenic |
TACTTGCTTTGGCAGGATGG+TGG | 0.561157 | 2.2:+152797 | MS.gene83508:intron |
TCTTCCGCATCGAGTATGCC+AGG | 0.561191 | 2.2:-151354 | None:intergenic |
TGGAGAAGAGACTCCACTAC+AGG | 0.565236 | 2.2:+150672 | MS.gene83508:CDS |
GCGCCTAAACACCCTCAAGA+TGG | 0.566557 | 2.2:-160070 | None:intergenic |
CCACAATTCCGACGAAGAGA+TGG | 0.568974 | 2.2:-159650 | None:intergenic |
TTCAATGCTCGAAAGCCAGA+AGG | 0.571851 | 2.2:+159597 | MS.gene83508:CDS |
TGAGGCTGAATTGGCAGCAG+TGG | 0.571899 | 2.2:+159820 | MS.gene83508:CDS |
ATATCTCAGGTTCCTGCTGA+CGG | 0.571988 | 2.2:+150029 | MS.gene83508:intron |
GCAATCTATTGAAGAAGAGA+AGG | 0.575107 | 2.2:+153366 | MS.gene83508:CDS |
GTTCTTGGTACAGCTTCTGT+GGG | 0.578142 | 2.2:+158121 | MS.gene83508:intron |
CAAAATTCCATCCAAGGAGG+AGG | 0.579137 | 2.2:+153767 | MS.gene83508:CDS |
AGATCGACAAAGTTGTAGAA+GGG | 0.582372 | 2.2:+151043 | MS.gene83508:CDS |
CTATCAGCCTGCGAAACCAT+GGG | 0.583073 | 2.2:+151494 | MS.gene83508:CDS |
TCAGGCTGCAAAGTAGCAGA+TGG | 0.586534 | 2.2:+150228 | MS.gene83508:CDS |
TGGAACTTTGACCTTAAACC+AGG | 0.587521 | 2.2:+151547 | MS.gene83508:CDS |
CTGATGCAAAGTTATCATCC+AGG | 0.592331 | 2.2:-156694 | None:intergenic |
GCAACTATCTCAGAGGACAC+TGG | 0.592755 | 2.2:+150652 | MS.gene83508:CDS |
GTGGTTGTCGCAGTGCCAGA+AGG | 0.592840 | 2.2:+151191 | MS.gene83508:CDS |
TGATGCCCCTGCTCTTCATG+AGG | 0.595324 | 2.2:+154800 | MS.gene83508:CDS |
GAAGGGATGAATGTCTTCAA+AGG | 0.598151 | 2.2:+159615 | MS.gene83508:CDS |
TCTTTGACTCCAGGGCGACA+AGG | 0.598349 | 2.2:-154118 | None:intergenic |
TCACAGCCTCTTTGACTCCA+GGG | 0.600279 | 2.2:-154126 | None:intergenic |
ACAGATCACCAGTTGGCCGA+AGG | 0.601147 | 2.2:+158213 | MS.gene83508:CDS |
TTCAGGATCTCCTACAGAGA+AGG | 0.602194 | 2.2:+152832 | MS.gene83508:CDS |
TACAGACCTCATGAAGAGCA+GGG | 0.602411 | 2.2:-154806 | None:intergenic |
CTCTTATAACAAATATCATG+TGG | 0.602939 | 2.2:+158818 | MS.gene83508:CDS |
TAACTTTGCATCAGTAGTGA+AGG | 0.604610 | 2.2:+156703 | MS.gene83508:CDS |
TGCAAAGTAGCAGATGGAGT+TGG | 0.605106 | 2.2:+150234 | MS.gene83508:CDS |
ATTGGACAAAATTCCATCCA+AGG | 0.605739 | 2.2:+153761 | MS.gene83508:CDS |
ATAAATCACACTTACAGCAA+TGG | 0.607583 | 2.2:-151082 | None:intergenic |
ACTCTGAAGTGCATATACAT+TGG | 0.608030 | 2.2:+153281 | MS.gene83508:CDS |
TAGTTGAGGCATATGCTGCT+GGG | 0.609448 | 2.2:+152452 | MS.gene83508:CDS |
GAAGTGCATATACATTGGAA+AGG | 0.611486 | 2.2:+153286 | MS.gene83508:CDS |
TCTGTATAGGTTGTTCGTTG+GGG | 0.611778 | 2.2:+157898 | MS.gene83508:intron |
ACTCAGAACCATCTCTTCGT+CGG | 0.612621 | 2.2:+159642 | MS.gene83508:CDS |
AATTGTCGTAGCAGAGCCCA+TGG | 0.612799 | 2.2:-151510 | None:intergenic |
TGAGGCATATGCTGCTGGGA+GGG | 0.612963 | 2.2:+152456 | MS.gene83508:CDS |
AAAGCAATATCTTTGGAGTG+TGG | 0.613698 | 2.2:+154396 | MS.gene83508:CDS |
ATTAGTGCCATCTCCTGTGA+CGG | 0.614092 | 2.2:-154778 | None:intergenic |
TAACAATGATACAGGTGCGA+AGG | 0.616593 | 2.2:+151471 | MS.gene83508:intron |
TCAATGCTCGAAAGCCAGAA+GGG | 0.618302 | 2.2:+159598 | MS.gene83508:CDS |
TTGCTACAGGCCATAAGAGG+TGG | 0.624165 | 2.2:+149863 | MS.gene83508:intron |
AGTCGTGCAGGTAACAATTG+TGG | 0.624500 | 2.2:+151172 | MS.gene83508:intron |
TGTGAACCCATAGGTACGCA+TGG | 0.631891 | 2.2:+154347 | MS.gene83508:intron |
TTGTCGCCCTGGAGTCAAAG+AGG | 0.632916 | 2.2:+154120 | MS.gene83508:CDS |
TTCCCAAAACACCAATGTCA+CGG | 0.635732 | 2.2:+160046 | MS.gene83508:CDS |
GAGTGTTCTGTAGGTTCACA+AGG | 0.639577 | 2.2:+150182 | MS.gene83508:intron |
TTATAACAAATATCATGTGG+AGG | 0.643326 | 2.2:+158821 | MS.gene83508:CDS |
AGGGCAGGGGAAACCTGTAG+TGG | 0.643362 | 2.2:-150685 | None:intergenic |
GTTGGTATAAATACTGAGTG+GGG | 0.650357 | 2.2:+150619 | MS.gene83508:CDS |
AGGAGGAGGATTTAGACCAG+TGG | 0.654078 | 2.2:+153781 | MS.gene83508:CDS |
TTGAGGCATATGCTGCTGGG+AGG | 0.655874 | 2.2:+152455 | MS.gene83508:CDS |
CTGTGCATAAGACTGTCAGT+TGG | 0.659688 | 2.2:-158194 | None:intergenic |
ATCTTGATTCAAATGGTCAG+CGG | 0.665704 | 2.2:+153344 | MS.gene83508:CDS |
GTGGCAGCTATATCTTCTGG+TGG | 0.666335 | 2.2:+158000 | MS.gene83508:CDS |
CTTATGCACAGATCACCAGT+TGG | 0.666541 | 2.2:+158206 | MS.gene83508:CDS |
ACAGCCTGGCATACTCGATG+CGG | 0.676838 | 2.2:+151350 | MS.gene83508:intron |
ACAGACCTCATGAAGAGCAG+GGG | 0.680352 | 2.2:-154805 | None:intergenic |
GTGTTGGTATAAATACTGAG+TGG | 0.687349 | 2.2:+150617 | MS.gene83508:CDS |
GTTGATGGCAACTATCTCAG+AGG | 0.692767 | 2.2:+150645 | MS.gene83508:CDS |
GGAAGTTTGCAACAACAGTG+AGG | 0.695622 | 2.2:+159802 | MS.gene83508:CDS |
ATAGGTACGCATGGTTACTG+GGG | 0.713008 | 2.2:+154356 | MS.gene83508:intron |
ATTGTAGATGACTGTAGTTG+AGG | 0.713595 | 2.2:+152438 | MS.gene83508:intron |
GGACAAAATTCCATCCAAGG+AGG | 0.728194 | 2.2:+153764 | MS.gene83508:CDS |
AGGGTGAGGTACCTGTACTG+CGG | 0.755227 | 2.2:-158034 | None:intergenic |
GGCTGTGAGATTATGCACTG+AGG | 0.767177 | 2.2:+154141 | MS.gene83508:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.2 | gene | 149718 | 160116 | 149718 | ID=MS.gene83508 |
chr2.2 | mRNA | 149718 | 160116 | 149718 | ID=MS.gene83508.t1;Parent=MS.gene83508 |
chr2.2 | exon | 149718 | 149788 | 149718 | ID=MS.gene83508.t1.exon1;Parent=MS.gene83508.t1 |
chr2.2 | CDS | 149718 | 149788 | 149718 | ID=cds.MS.gene83508.t1;Parent=MS.gene83508.t1 |
chr2.2 | exon | 149872 | 149955 | 149872 | ID=MS.gene83508.t1.exon2;Parent=MS.gene83508.t1 |
chr2.2 | CDS | 149872 | 149955 | 149872 | ID=cds.MS.gene83508.t1;Parent=MS.gene83508.t1 |
chr2.2 | exon | 150038 | 150115 | 150038 | ID=MS.gene83508.t1.exon3;Parent=MS.gene83508.t1 |
chr2.2 | CDS | 150038 | 150115 | 150038 | ID=cds.MS.gene83508.t1;Parent=MS.gene83508.t1 |
chr2.2 | exon | 150195 | 150266 | 150195 | ID=MS.gene83508.t1.exon4;Parent=MS.gene83508.t1 |
chr2.2 | CDS | 150195 | 150266 | 150195 | ID=cds.MS.gene83508.t1;Parent=MS.gene83508.t1 |
chr2.2 | exon | 150610 | 150693 | 150610 | ID=MS.gene83508.t1.exon5;Parent=MS.gene83508.t1 |
chr2.2 | CDS | 150610 | 150693 | 150610 | ID=cds.MS.gene83508.t1;Parent=MS.gene83508.t1 |
chr2.2 | exon | 150806 | 150888 | 150806 | ID=MS.gene83508.t1.exon6;Parent=MS.gene83508.t1 |
chr2.2 | CDS | 150806 | 150888 | 150806 | ID=cds.MS.gene83508.t1;Parent=MS.gene83508.t1 |
chr2.2 | exon | 150981 | 151089 | 150981 | ID=MS.gene83508.t1.exon7;Parent=MS.gene83508.t1 |
chr2.2 | CDS | 150981 | 151089 | 150981 | ID=cds.MS.gene83508.t1;Parent=MS.gene83508.t1 |
chr2.2 | exon | 151182 | 151237 | 151182 | ID=MS.gene83508.t1.exon8;Parent=MS.gene83508.t1 |
chr2.2 | CDS | 151182 | 151237 | 151182 | ID=cds.MS.gene83508.t1;Parent=MS.gene83508.t1 |
chr2.2 | exon | 151354 | 151396 | 151354 | ID=MS.gene83508.t1.exon9;Parent=MS.gene83508.t1 |
chr2.2 | CDS | 151354 | 151396 | 151354 | ID=cds.MS.gene83508.t1;Parent=MS.gene83508.t1 |
chr2.2 | exon | 151485 | 151568 | 151485 | ID=MS.gene83508.t1.exon10;Parent=MS.gene83508.t1 |
chr2.2 | CDS | 151485 | 151568 | 151485 | ID=cds.MS.gene83508.t1;Parent=MS.gene83508.t1 |
chr2.2 | exon | 152445 | 152585 | 152445 | ID=MS.gene83508.t1.exon11;Parent=MS.gene83508.t1 |
chr2.2 | CDS | 152445 | 152585 | 152445 | ID=cds.MS.gene83508.t1;Parent=MS.gene83508.t1 |
chr2.2 | exon | 152812 | 152877 | 152812 | ID=MS.gene83508.t1.exon12;Parent=MS.gene83508.t1 |
chr2.2 | CDS | 152812 | 152877 | 152812 | ID=cds.MS.gene83508.t1;Parent=MS.gene83508.t1 |
chr2.2 | exon | 152979 | 153077 | 152979 | ID=MS.gene83508.t1.exon13;Parent=MS.gene83508.t1 |
chr2.2 | CDS | 152979 | 153077 | 152979 | ID=cds.MS.gene83508.t1;Parent=MS.gene83508.t1 |
chr2.2 | exon | 153277 | 153387 | 153277 | ID=MS.gene83508.t1.exon14;Parent=MS.gene83508.t1 |
chr2.2 | CDS | 153277 | 153387 | 153277 | ID=cds.MS.gene83508.t1;Parent=MS.gene83508.t1 |
chr2.2 | exon | 153684 | 153851 | 153684 | ID=MS.gene83508.t1.exon15;Parent=MS.gene83508.t1 |
chr2.2 | CDS | 153684 | 153851 | 153684 | ID=cds.MS.gene83508.t1;Parent=MS.gene83508.t1 |
chr2.2 | exon | 154115 | 154174 | 154115 | ID=MS.gene83508.t1.exon16;Parent=MS.gene83508.t1 |
chr2.2 | CDS | 154115 | 154174 | 154115 | ID=cds.MS.gene83508.t1;Parent=MS.gene83508.t1 |
chr2.2 | exon | 154360 | 154524 | 154360 | ID=MS.gene83508.t1.exon17;Parent=MS.gene83508.t1 |
chr2.2 | CDS | 154360 | 154524 | 154360 | ID=cds.MS.gene83508.t1;Parent=MS.gene83508.t1 |
chr2.2 | exon | 154705 | 154821 | 154705 | ID=MS.gene83508.t1.exon18;Parent=MS.gene83508.t1 |
chr2.2 | CDS | 154705 | 154821 | 154705 | ID=cds.MS.gene83508.t1;Parent=MS.gene83508.t1 |
chr2.2 | exon | 156626 | 156724 | 156626 | ID=MS.gene83508.t1.exon19;Parent=MS.gene83508.t1 |
chr2.2 | CDS | 156626 | 156724 | 156626 | ID=cds.MS.gene83508.t1;Parent=MS.gene83508.t1 |
chr2.2 | exon | 157907 | 158044 | 157907 | ID=MS.gene83508.t1.exon20;Parent=MS.gene83508.t1 |
chr2.2 | CDS | 157907 | 158044 | 157907 | ID=cds.MS.gene83508.t1;Parent=MS.gene83508.t1 |
chr2.2 | exon | 158134 | 158234 | 158134 | ID=MS.gene83508.t1.exon21;Parent=MS.gene83508.t1 |
chr2.2 | CDS | 158134 | 158234 | 158134 | ID=cds.MS.gene83508.t1;Parent=MS.gene83508.t1 |
chr2.2 | exon | 158813 | 158858 | 158813 | ID=MS.gene83508.t1.exon22;Parent=MS.gene83508.t1 |
chr2.2 | CDS | 158813 | 158858 | 158813 | ID=cds.MS.gene83508.t1;Parent=MS.gene83508.t1 |
chr2.2 | exon | 158965 | 159093 | 158965 | ID=MS.gene83508.t1.exon23;Parent=MS.gene83508.t1 |
chr2.2 | CDS | 158965 | 159093 | 158965 | ID=cds.MS.gene83508.t1;Parent=MS.gene83508.t1 |
chr2.2 | exon | 159585 | 159692 | 159585 | ID=MS.gene83508.t1.exon24;Parent=MS.gene83508.t1 |
chr2.2 | CDS | 159585 | 159692 | 159585 | ID=cds.MS.gene83508.t1;Parent=MS.gene83508.t1 |
chr2.2 | exon | 159780 | 159871 | 159780 | ID=MS.gene83508.t1.exon25;Parent=MS.gene83508.t1 |
chr2.2 | CDS | 159780 | 159871 | 159780 | ID=cds.MS.gene83508.t1;Parent=MS.gene83508.t1 |
chr2.2 | exon | 160011 | 160116 | 160011 | ID=MS.gene83508.t1.exon26;Parent=MS.gene83508.t1 |
chr2.2 | CDS | 160011 | 160116 | 160011 | ID=cds.MS.gene83508.t1;Parent=MS.gene83508.t1 |
Gene Sequence |
Protein sequence |