AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene050538


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene050538.t1 MTR_7g115310 95.616 479 15 3 1 473 389 867 0.0 897
MS.gene050538.t1 MTR_1g106590 87.912 91 11 0 288 378 37 127 2.06e-48 170
MS.gene050538.t1 MTR_2g064620 25.538 372 233 14 83 427 3 357 1.07e-26 110
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene050538.t1 AT3G04650 67.706 449 137 4 25 471 43 485 0.0 611
MS.gene050538.t1 AT1G56000 27.763 371 226 15 77 421 23 377 3.28e-36 138
MS.gene050538.t1 AT1G56000 25.526 333 209 13 113 421 5 322 6.73e-26 108
MS.gene050538.t1 AT1G55980 26.708 322 196 14 77 374 23 328 3.64e-25 106
MS.gene050538.t1 AT1G55980 26.708 322 196 14 77 374 163 468 1.64e-24 106
MS.gene050538.t1 AT1G55980 23.944 284 179 12 113 374 5 273 5.66e-15 75.5

Find 151 sgRNAs with CRISPR-Local

Find 255 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCATTTGTTTAGCAATTAA+TGG 0.158218 7.4:-2359802 None:intergenic
CAGCAATTTCTTGGTATTAT+TGG 0.162646 7.4:-2360080 None:intergenic
CGCCGTCGCCACGGTGAAAA+TGG 0.211874 7.4:+2358219 MS.gene050538:CDS
GTTCCTCAAACGCTGCTAAA+AGG 0.214975 7.4:-2359979 None:intergenic
AGTAAATTGGAGCCATTTAA+TGG 0.238781 7.4:+2359528 MS.gene050538:CDS
TTTCTAAGTACTGCTGCTTA+TGG 0.240911 7.4:+2360136 MS.gene050538:CDS
AGTTGGAGCTTCGTATAAAA+AGG 0.246702 7.4:-2360552 None:intergenic
AAGGCTTATTGATGATTCTT+TGG 0.269333 7.4:+2358486 MS.gene050538:CDS
ATTGGACAATTCCCAGGTTT+GGG 0.284130 7.4:+2361296 MS.gene050538:CDS
ATGTGGCACTTGAGTGAAAA+TGG 0.291266 7.4:+2359552 MS.gene050538:CDS
TTTATACGAAGCTCCAACTA+TGG 0.297002 7.4:+2360556 MS.gene050538:CDS
CTGGGAAGCCAGCAATTTCT+TGG 0.306680 7.4:-2360089 None:intergenic
TGTTAATGTTTGGTTGGATA+AGG 0.312436 7.4:+2358564 MS.gene050538:CDS
CCTTGCATCTTTGATCCCTT+TGG 0.312753 7.4:+2360925 MS.gene050538:CDS
AAGTGCCACATCCCATTAAA+TGG 0.331387 7.4:-2359540 None:intergenic
AGAGGATCTTCTGCGGGGTT+TGG 0.337197 7.4:-2358257 None:intergenic
GGCTGGAATTGAGTTCAATA+TGG 0.346393 7.4:+2359954 MS.gene050538:CDS
TTTGATCCCTTTGGAAGGGC+TGG 0.351182 7.4:+2360934 MS.gene050538:CDS
CCACTGGAAGGGCATGATAT+TGG 0.357198 7.4:+2361278 MS.gene050538:CDS
TATTGGACAATTCCCAGGTT+TGG 0.357408 7.4:+2361295 MS.gene050538:CDS
CACCGTGGCGACGGCGGTTG+AGG 0.367448 7.4:-2358212 None:intergenic
GACACTGGTATTCATGGTCT+TGG 0.368585 7.4:+2358448 MS.gene050538:CDS
CTTCTGCGGGGTTTGGAGGG+TGG 0.372413 7.4:-2358250 None:intergenic
GGATCTTCTGCGGGGTTTGG+AGG 0.374362 7.4:-2358254 None:intergenic
TCATGGTCTTGGAGGAAGAT+TGG 0.376531 7.4:+2358459 MS.gene050538:CDS
ACTTTGACTCTTACCATAGT+TGG 0.379168 7.4:-2360569 None:intergenic
GTTAATGTTTGGTTGGATAA+GGG 0.379633 7.4:+2358565 MS.gene050538:CDS
TGTTTGGTTGGATAAGGGTT+TGG 0.386223 7.4:+2358570 MS.gene050538:CDS
GATGGACGGTTGATTAAGTA+TGG 0.387494 7.4:-2358187 None:intergenic
ACTTGGCAAGTTCATATACT+TGG 0.387565 7.4:-2361343 None:intergenic
ACCGTGCTGGATCAGTAAAT+TGG 0.400349 7.4:+2359515 MS.gene050538:CDS
AGTGACTTGCTCTTGTTTGA+AGG 0.409804 7.4:-2358314 None:intergenic
TATGAGCACCATAGCCTACT+TGG 0.417255 7.4:-2361360 None:intergenic
CAGGGTCAGTTCCGAGACTT+TGG 0.419022 7.4:-2361220 None:intergenic
CATAAACCATAAAACATGTT+TGG 0.419107 7.4:+2358124 None:intergenic
GTAAATTGGAGCCATTTAAT+GGG 0.420332 7.4:+2359529 MS.gene050538:CDS
AACCGCTTGCTTATGACATC+GGG 0.420523 7.4:+2359775 MS.gene050538:CDS
CATGGTCTTGGAGGAAGATT+GGG 0.422905 7.4:+2358460 MS.gene050538:CDS
CAACCTAACCTCAGAGAGTA+AGG 0.424200 7.4:-2358707 None:intergenic
TTGCTGAAATTGTTAATGTT+TGG 0.427289 7.4:+2358554 MS.gene050538:CDS
AACAGTGAGGACCGTCACTC+TGG 0.431628 7.4:-2360108 None:intergenic
CTGCGGGGTTTGGAGGGTGG+TGG 0.443567 7.4:-2358247 None:intergenic
CCACGAGTAGCTATATATCT+TGG 0.446647 7.4:-2358664 None:intergenic
TTTACGAGAAGTTCCGTAAG+AGG 0.449507 7.4:-2358275 None:intergenic
ATATGTGGTGATTGGCTGCT+AGG 0.461805 7.4:+2360958 MS.gene050538:CDS
TTCCTCAAACGCTGCTAAAA+GGG 0.463192 7.4:-2359978 None:intergenic
CATCTTTGATCCCTTTGGAA+GGG 0.464319 7.4:+2360930 MS.gene050538:CDS
GAACCACTTGTCGGCATCAT+CGG 0.467385 7.4:+2358358 MS.gene050538:CDS
CAATAATACCAAGAAATTGC+TGG 0.469630 7.4:+2360081 MS.gene050538:CDS
CTCACAAAAGCTCCTTCAAA+AGG 0.471085 7.4:-2360031 None:intergenic
GCATCTTTGATCCCTTTGGA+AGG 0.471178 7.4:+2360929 MS.gene050538:CDS
TTGATCCCTTTGGAAGGGCT+GGG 0.471633 7.4:+2360935 MS.gene050538:CDS
GCGACGGCGGTTGAGGAAGA+TGG 0.473878 7.4:-2358205 None:intergenic
GTAAAGGAAGGCATGCTAGA+AGG 0.474473 7.4:+2360486 MS.gene050538:CDS
ATAAGGGTTTGGTTCGAGAA+TGG 0.479869 7.4:+2358581 MS.gene050538:CDS
AGTATATGAACTTGCCAAGT+AGG 0.479981 7.4:+2361346 MS.gene050538:CDS
TCCGTAAGAGGATCTTCTGC+GGG 0.484423 7.4:-2358263 None:intergenic
ATCATCGGCGGTGGTATCTC+CGG 0.491348 7.4:+2358373 MS.gene050538:CDS
ACTTCTGTATTCTCTAGAAA+AGG 0.493880 7.4:-2360007 None:intergenic
CATGATATTGGACAATTCCC+AGG 0.495655 7.4:+2361290 MS.gene050538:CDS
TTTGGAAGGGCTGGGATATG+TGG 0.496617 7.4:+2360943 MS.gene050538:CDS
ATTAATTGCTAAACAAATGA+AGG 0.496646 7.4:+2359804 MS.gene050538:CDS
AAACCAACAGCAAACTCTCC+AGG 0.498698 7.4:-2361239 None:intergenic
GGGTTTGGTTCGAGAATGGA+AGG 0.500510 7.4:+2358585 MS.gene050538:CDS
ACAAGTGGTTCGTCGGAGAA+AGG 0.501845 7.4:-2358346 None:intergenic
GGGCTGGGATATGTGGTGAT+TGG 0.502331 7.4:+2360950 MS.gene050538:CDS
TTCCTCAACCGCCGTCGCCA+CGG 0.504679 7.4:+2358210 MS.gene050538:CDS
GGAACTCCAGGTGTGTTAGT+TGG 0.508557 7.4:-2360904 None:intergenic
GATCTTCTGCGGGGTTTGGA+GGG 0.512856 7.4:-2358253 None:intergenic
TCAAAGATGCAAGGAACTCC+AGG 0.513356 7.4:-2360916 None:intergenic
TGCTGATTCCTTACTCTCTG+AGG 0.515444 7.4:+2358699 MS.gene050538:CDS
CAAAGTCTCGGAACTGACCC+TGG 0.517585 7.4:+2361221 MS.gene050538:CDS
GACCCTGGAGAGTTTGCTGT+TGG 0.521304 7.4:+2361236 MS.gene050538:CDS
CTTGGCAAGTTCATATACTT+GGG 0.523177 7.4:-2361342 None:intergenic
TAACCGCTTGCTTATGACAT+CGG 0.524146 7.4:+2359774 MS.gene050538:CDS
TTCTCCGACGAACCACTTGT+CGG 0.524522 7.4:+2358349 MS.gene050538:CDS
TGGAGCCATTTAATGGGATG+TGG 0.526525 7.4:+2359535 MS.gene050538:CDS
TTGGAGGAAGATTGGGAACA+AGG 0.527169 7.4:+2358467 MS.gene050538:CDS
TGTTACAGCAACAAGGGTAA+AGG 0.528484 7.4:+2360470 MS.gene050538:CDS
GCTGCTAGGTTCTAATATAG+AGG 0.529461 7.4:+2360972 MS.gene050538:CDS
ACTGGTATTCATGGTCTTGG+AGG 0.535741 7.4:+2358451 MS.gene050538:CDS
ATAAGCAGCAGTACTTAGAA+AGG 0.536774 7.4:-2360134 None:intergenic
CGAGTAGCTATATATCTTGG+AGG 0.540308 7.4:-2358661 None:intergenic
GAATCATGAGTTTCAACCAC+TGG 0.544214 7.4:+2361262 MS.gene050538:CDS
GCTGGAATTGAGTTCAATAT+GGG 0.547006 7.4:+2359955 MS.gene050538:CDS
GATTAAGTATGGAGCTGTGG+AGG 0.547693 7.4:-2358176 None:intergenic
AGAGTGACGGTCCTCACTGT+TGG 0.547828 7.4:+2360110 MS.gene050538:CDS
TGAAATTGTTAATGTTTGGT+TGG 0.553129 7.4:+2358558 MS.gene050538:CDS
GAAGATAGCGCAAATGAGAC+CGG 0.553399 7.4:-2358392 None:intergenic
CTGCCCTCGGATTATCGAAA+GGG 0.553953 7.4:+2360517 MS.gene050538:CDS
ATGAATACCAGTGTCGAAAA+CGG 0.555330 7.4:-2358440 None:intergenic
GCTATATATCTTGGAGGAGA+GGG 0.561504 7.4:-2358655 None:intergenic
ACCCTTGTTGCTGTAACAGT+AGG 0.565468 7.4:-2360465 None:intergenic
GAAGGTGTTGAGGCTGCCCT+CGG 0.566261 7.4:+2360504 MS.gene050538:CDS
CATATCCCAGCCCTTCCAAA+GGG 0.571328 7.4:-2360940 None:intergenic
ATAGAGGCAGCAGTCATAAG+TGG 0.573140 7.4:+2360988 MS.gene050538:CDS
TTTCTTCTGACCCCAAACCT+GGG 0.573694 7.4:-2361307 None:intergenic
CCAATATCATGCCCTTCCAG+TGG 0.575651 7.4:-2361278 None:intergenic
CCGCCGATGATGCCGACAAG+TGG 0.575746 7.4:-2358361 None:intergenic
CGAGAATGGAAGGGTACTGT+AGG 0.576220 7.4:+2358595 MS.gene050538:CDS
ACTGTAGGAGAGTTGAAGAA+TGG 0.576821 7.4:+2358610 MS.gene050538:CDS
AGCTATATATCTTGGAGGAG+AGG 0.578667 7.4:-2358656 None:intergenic
CTTGTCGGCATCATCGGCGG+TGG 0.579771 7.4:+2358364 MS.gene050538:CDS
GAGGAATTGATTCAGTGTCA+TGG 0.579924 7.4:+2360053 MS.gene050538:CDS
ACAGTGAGGACCGTCACTCT+GGG 0.580951 7.4:-2360107 None:intergenic
TGTGGCACTTGAGTGAAAAT+GGG 0.582715 7.4:+2359553 MS.gene050538:CDS
GCAGACTATATCCAAAGTCT+CGG 0.585256 7.4:+2361209 MS.gene050538:CDS
AGTTCTCGTGTAGACTAGCT+TGG 0.585699 7.4:+2359479 MS.gene050538:intron
TTCCTACTGTTACAGCAACA+AGG 0.590217 7.4:+2360463 MS.gene050538:CDS
CATGAGTTTCAACCACTGGA+AGG 0.591971 7.4:+2361266 MS.gene050538:CDS
GTAGACTAGCTTGGTGAATG+TGG 0.592576 7.4:+2359488 MS.gene050538:intron
GATGCCGACAAGTGGTTCGT+CGG 0.594689 7.4:-2358353 None:intergenic
AACCAACAGCAAACTCTCCA+GGG 0.596550 7.4:-2361238 None:intergenic
ATTAAGTATGGAGCTGTGGA+GGG 0.598053 7.4:-2358175 None:intergenic
ATGAGTTTCAACCACTGGAA+GGG 0.600186 7.4:+2361267 MS.gene050538:CDS
GCTCTTCCAACTAACACACC+TGG 0.600578 7.4:+2360898 MS.gene050538:CDS
AGTGAAAATGGGAAACCTCG+TGG 0.603023 7.4:+2359564 MS.gene050538:CDS
ACATATCCCAGCCCTTCCAA+AGG 0.604486 7.4:-2360941 None:intergenic
GTATTCTCTAGAAAAGGAAG+AGG 0.605613 7.4:-2360001 None:intergenic
AATTGATTCAGTGTCATGGA+TGG 0.607121 7.4:+2360057 MS.gene050538:CDS
CCACTTGTCGGCATCATCGG+CGG 0.608760 7.4:+2358361 MS.gene050538:CDS
CCCCGCAGAAGATCCTCTTA+CGG 0.611097 7.4:+2358262 MS.gene050538:CDS
CCAAGATATATAGCTACTCG+TGG 0.614560 7.4:+2358664 MS.gene050538:CDS
AAAACAGAACAAGGTTCCAC+AGG 0.618596 7.4:+2360159 MS.gene050538:CDS
CCAAAGGGATCAAAGATGCA+AGG 0.620527 7.4:-2360925 None:intergenic
GCTGCCCTCGGATTATCGAA+AGG 0.624060 7.4:+2360516 MS.gene050538:CDS
TGAATGTGGAGAGACCGTGC+TGG 0.629635 7.4:+2359502 MS.gene050538:CDS
GTGAAAATGGGAAACCTCGT+GGG 0.634127 7.4:+2359565 MS.gene050538:CDS
TCCTACTGTTACAGCAACAA+GGG 0.638142 7.4:+2360464 MS.gene050538:CDS
TTGCTGGCTTCCCAGAGTGA+CGG 0.638724 7.4:+2360097 MS.gene050538:CDS
TGCTTATGGAAAACAGAACA+AGG 0.641251 7.4:+2360150 MS.gene050538:CDS
AGGCATGCTAGAAGGTGTTG+AGG 0.643411 7.4:+2360494 MS.gene050538:CDS
GTTGATTAAGTATGGAGCTG+TGG 0.645418 7.4:-2358179 None:intergenic
GCAACCCTTTCGATAATCCG+AGG 0.646112 7.4:-2360521 None:intergenic
TTGGACAATTCCCAGGTTTG+GGG 0.647470 7.4:+2361297 MS.gene050538:CDS
TTCCGTAAGAGGATCTTCTG+CGG 0.652133 7.4:-2358264 None:intergenic
AACCCGATGTCATAAGCAAG+CGG 0.656989 7.4:-2359777 None:intergenic
ACAGCAACAAGGGTAAAGGA+AGG 0.657319 7.4:+2360474 MS.gene050538:CDS
GCAATTGTTGTTGCACACAA+TGG 0.658808 7.4:+2359597 MS.gene050538:CDS
TCCAATTTACTGATCCAGCA+CGG 0.667315 7.4:-2359516 None:intergenic
CAACCCTTTCGATAATCCGA+GGG 0.671065 7.4:-2360520 None:intergenic
TTGGTCTGAATATGAAAACA+TGG 0.672279 7.4:+2358143 MS.gene050538:CDS
GTAGGAGAGTTGAAGAATGG+TGG 0.676137 7.4:+2358613 MS.gene050538:CDS
TGGTTCGTCGGAGAAAGGAG+CGG 0.684420 7.4:-2358341 None:intergenic
CGGCGGTTGAGGAAGATGGA+CGG 0.686159 7.4:-2358201 None:intergenic
CCGTAAGAGGATCTTCTGCG+GGG 0.688670 7.4:-2358262 None:intergenic
GGTTTGGTTCGAGAATGGAA+GGG 0.690767 7.4:+2358586 MS.gene050538:CDS
GCTATCTTCTTAGACAAACG+CGG 0.704386 7.4:+2358406 MS.gene050538:CDS
CTTAGAAAGGTCCAACAGTG+AGG 0.708141 7.4:-2360121 None:intergenic
AATACCAGTGTCGAAAACGG+TGG 0.722308 7.4:-2358437 None:intergenic
ATTGCATCAAACTTCCCACG+AGG 0.748470 7.4:-2359579 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AACTTATTTTTTTAACAAAA+TGG + chr7.4:2359144-2359163 MS.gene050538:intron 10.0%
!!! AGAAAAAAATAGATTTTTTT+TGG - chr7.4:2358959-2358978 None:intergenic 10.0%
!! TAAATATTAATGAAAGTTGA+GGG + chr7.4:2359325-2359344 MS.gene050538:intron 15.0%
!! TTAAATATTAATGAAAGTTG+AGG + chr7.4:2359324-2359343 MS.gene050538:intron 15.0%
!!! TTTAACAAAATGGATTTTTA+TGG + chr7.4:2359154-2359173 MS.gene050538:intron 15.0%
!! ACATTGTAAGTAAACTTAAA+AGG + chr7.4:2360838-2360857 MS.gene050538:intron 20.0%
!! ATTAATTGCTAAACAAATGA+AGG + chr7.4:2359804-2359823 MS.gene050538:CDS 20.0%
!! TAAACATGAATTACTACTAA+TGG - chr7.4:2361118-2361137 None:intergenic 20.0%
!! TACTGAAAAATGTGTAAAAA+CGG - chr7.4:2359675-2359694 None:intergenic 20.0%
!! TCTTAACACAAAAATAACAT+GGG - chr7.4:2359455-2359474 None:intergenic 20.0%
!! TTCATTTGTTTAGCAATTAA+TGG - chr7.4:2359805-2359824 None:intergenic 20.0%
!! TTCTTAACACAAAAATAACA+TGG - chr7.4:2359456-2359475 None:intergenic 20.0%
!!! ATAAATTTTAATCAAATCCC+TGG - chr7.4:2360341-2360360 None:intergenic 20.0%
!!! ATCTATTTTTTTCAACAACA+AGG + chr7.4:2359099-2359118 MS.gene050538:intron 20.0%
!!! ATTGGCATTGTTTAATTTAA+GGG + chr7.4:2359295-2359314 MS.gene050538:intron 20.0%
!!! TCATTTTTAAGTGTTTGTTT+TGG + chr7.4:2358997-2359016 MS.gene050538:intron 20.0%
!!! TTTTTACACATTTTTCAGTA+TGG + chr7.4:2359675-2359694 MS.gene050538:intron 20.0%
! AAACAATGCCAATCAATTTA+GGG - chr7.4:2359288-2359307 None:intergenic 25.0%
! AATACACAAATGAAAATGCA+TGG - chr7.4:2360379-2360398 None:intergenic 25.0%
! ATACACAAATGAAAATGCAT+GGG - chr7.4:2360378-2360397 None:intergenic 25.0%
! CAATATGTATAACCTTTCAT+AGG + chr7.4:2358864-2358883 MS.gene050538:intron 25.0%
! GAAAAACTTAACGATAATCT+TGG - chr7.4:2359383-2359402 None:intergenic 25.0%
! TAAACAATGCCAATCAATTT+AGG - chr7.4:2359289-2359308 None:intergenic 25.0%
! TATTTGGAAAAATGACCAAA+TGG - chr7.4:2358779-2358798 None:intergenic 25.0%
! TCCTAAAATGAAAAGCTATT+AGG + chr7.4:2359060-2359079 MS.gene050538:intron 25.0%
! TGAAATTGTTAATGTTTGGT+TGG + chr7.4:2358558-2358577 MS.gene050538:CDS 25.0%
! TGTATCTGTAGTGTTATATT+TGG - chr7.4:2358795-2358814 None:intergenic 25.0%
! TTGCTGAAATTGTTAATGTT+TGG + chr7.4:2358554-2358573 MS.gene050538:CDS 25.0%
!! ACACAATTTTGAACAACAAA+AGG - chr7.4:2361168-2361187 None:intergenic 25.0%
!! CACAATTTTGAACAACAAAA+GGG - chr7.4:2361167-2361186 None:intergenic 25.0%
!! CACTACAGATACAATTTTAA+AGG + chr7.4:2358802-2358821 MS.gene050538:intron 25.0%
!! GATTGGCATTGTTTAATTTA+AGG + chr7.4:2359294-2359313 MS.gene050538:intron 25.0%
!! TCCTAATAGCTTTTCATTTT+AGG - chr7.4:2359064-2359083 None:intergenic 25.0%
!! TTGTTGTTCAAAATTGTGTT+TGG + chr7.4:2361169-2361188 MS.gene050538:intron 25.0%
!! TTTTCCTGATAAACAAAACA+TGG - chr7.4:2360441-2360460 None:intergenic 25.0%
!!! AACCTTTCATAGGTTTTAAT+GGG + chr7.4:2358874-2358893 MS.gene050538:intron 25.0%
!!! AATGGATTTTTATGGATAGT+AGG + chr7.4:2359162-2359181 MS.gene050538:intron 25.0%
!!! AGAGACGTTTTTCAATTTAA+GGG - chr7.4:2358756-2358775 None:intergenic 25.0%
!!! GTATTATTCTGAGATTTTCA+GGG + chr7.4:2360870-2360889 MS.gene050538:intron 25.0%
!!! TAACCTTTCATAGGTTTTAA+TGG + chr7.4:2358873-2358892 MS.gene050538:intron 25.0%
!!! TATTATTCTGAGATTTTCAG+GGG + chr7.4:2360871-2360890 MS.gene050538:intron 25.0%
AACAAACCACGTAAATTAGA+AGG - chr7.4:2361053-2361072 None:intergenic 30.0%
ACCTAGAATAATATTTGCCA+GGG + chr7.4:2360321-2360340 MS.gene050538:intron 30.0%
AGCTTCGTATAAAAAGGTTT+AGG - chr7.4:2360549-2360568 None:intergenic 30.0%
AGTAAATTGGAGCCATTTAA+TGG + chr7.4:2359528-2359547 MS.gene050538:CDS 30.0%
AGTAGAATAGAAACAATAGG+TGG - chr7.4:2359920-2359939 None:intergenic 30.0%
ATGTATAGTTATCCGACTTA+TGG + chr7.4:2359707-2359726 MS.gene050538:intron 30.0%
CAATAATACCAAGAAATTGC+TGG + chr7.4:2360081-2360100 MS.gene050538:CDS 30.0%
CAGCAATTTCTTGGTATTAT+TGG - chr7.4:2360083-2360102 None:intergenic 30.0%
GACAGTAGAATAGAAACAAT+AGG - chr7.4:2359923-2359942 None:intergenic 30.0%
GGCAAATATTATTCTAGGTA+AGG - chr7.4:2360320-2360339 None:intergenic 30.0%
GGTATAGAGGAGTAATATAT+TGG + chr7.4:2360278-2360297 MS.gene050538:intron 30.0%
GTAAATTGGAGCCATTTAAT+GGG + chr7.4:2359529-2359548 MS.gene050538:CDS 30.0%
GTTAATGTTTGGTTGGATAA+GGG + chr7.4:2358565-2358584 MS.gene050538:CDS 30.0%
GTTTATCGAATCAAATGAAC+CGG - chr7.4:2359851-2359870 None:intergenic 30.0%
TACCTAGAATAATATTTGCC+AGG + chr7.4:2360320-2360339 MS.gene050538:intron 30.0%
TATGTTGTCAACAAATCAGA+CGG + chr7.4:2360770-2360789 MS.gene050538:intron 30.0%
TGTTAATGTTTGGTTGGATA+AGG + chr7.4:2358564-2358583 MS.gene050538:CDS 30.0%
TTACTAAAGAAGCCATAAGT+CGG - chr7.4:2359722-2359741 None:intergenic 30.0%
TTGGTCTGAATATGAAAACA+TGG + chr7.4:2358143-2358162 MS.gene050538:CDS 30.0%
! AAGGCTTATTGATGATTCTT+TGG + chr7.4:2358486-2358505 MS.gene050538:CDS 30.0%
! AATACAGAAGTTCCTTTTGA+AGG + chr7.4:2360019-2360038 MS.gene050538:CDS 30.0%
! ACTTCTGTATTCTCTAGAAA+AGG - chr7.4:2360010-2360029 None:intergenic 30.0%
! CTGCTATAGTTCTTAGATTT+TGG + chr7.4:2359414-2359433 MS.gene050538:intron 30.0%
! GATTTCAATGATGTCTTGTT+AGG - chr7.4:2358845-2358864 None:intergenic 30.0%
!! CTCAGTGTTAGATTGATTTT+GGG + chr7.4:2360235-2360254 MS.gene050538:intron 30.0%
!! GAGAGACGTTTTTCAATTTA+AGG - chr7.4:2358757-2358776 None:intergenic 30.0%
!! GGACTAGATTGTTGATAATA+AGG - chr7.4:2358735-2358754 None:intergenic 30.0%
!! TCAGTGTTAGATTGATTTTG+GGG + chr7.4:2360236-2360255 MS.gene050538:intron 30.0%
!! TGCTTGTTAGAGAGATATTT+TGG + chr7.4:2358897-2358916 MS.gene050538:intron 30.0%
!! TTGTTAGAGAGATATTTTGG+TGG + chr7.4:2358900-2358919 MS.gene050538:intron 30.0%
!!! CGTATTATTCTGAGATTTTC+AGG + chr7.4:2360869-2360888 MS.gene050538:intron 30.0%
!!! TAGATTTTGGTTTTTTGCTG+TGG + chr7.4:2359427-2359446 MS.gene050538:intron 30.0%
AAACAAATGAAGGTCAGTGT+AGG + chr7.4:2359814-2359833 MS.gene050538:intron 35.0%
AACCTGAACAAAAACATGTC+AGG - chr7.4:2360631-2360650 None:intergenic 35.0%
ACTCGACCTTTACAATTTGA+AGG + chr7.4:2359356-2359375 MS.gene050538:intron 35.0%
ACTTGGCAAGTTCATATACT+TGG - chr7.4:2361346-2361365 None:intergenic 35.0%
ACTTTGACTCTTACCATAGT+TGG - chr7.4:2360572-2360591 None:intergenic 35.0%
AGTTGGAGCTTCGTATAAAA+AGG - chr7.4:2360555-2360574 None:intergenic 35.0%
ATAAGCAGCAGTACTTAGAA+AGG - chr7.4:2360137-2360156 None:intergenic 35.0%
ATTGGACCTTCTAATTTACG+TGG + chr7.4:2361044-2361063 MS.gene050538:intron 35.0%
CACCCATTAAAACCTATGAA+AGG - chr7.4:2358879-2358898 None:intergenic 35.0%
CCAAAATCAATCTAACACTG+AGG - chr7.4:2360237-2360256 None:intergenic 35.0%
CCAATTGAAAGTGACATACA+TGG - chr7.4:2361029-2361048 None:intergenic 35.0%
CTTGGCAAGTTCATATACTT+GGG - chr7.4:2361345-2361364 None:intergenic 35.0%
CTTGGTCCTTCAAATTGTAA+AGG - chr7.4:2359365-2359384 None:intergenic 35.0%
GCTGGAATTGAGTTCAATAT+GGG + chr7.4:2359955-2359974 MS.gene050538:CDS 35.0%
TCCCTGGCAAATATTATTCT+AGG - chr7.4:2360325-2360344 None:intergenic 35.0%
TGCTTATGGAAAACAGAACA+AGG + chr7.4:2360150-2360169 MS.gene050538:CDS 35.0%
TTGAAAAACGTCTCTCCATT+TGG + chr7.4:2358761-2358780 MS.gene050538:intron 35.0%
TTTATACGAAGCTCCAACTA+TGG + chr7.4:2360556-2360575 MS.gene050538:CDS 35.0%
! AATTGATTCAGTGTCATGGA+TGG + chr7.4:2360057-2360076 MS.gene050538:CDS 35.0%
! ACTTACAATGTTTAGAGCTG+CGG - chr7.4:2360829-2360848 None:intergenic 35.0%
! ATGAATACCAGTGTCGAAAA+CGG - chr7.4:2358443-2358462 None:intergenic 35.0%
! GTATTCTCTAGAAAAGGAAG+AGG - chr7.4:2360004-2360023 None:intergenic 35.0%
! TTTCTAAGTACTGCTGCTTA+TGG + chr7.4:2360136-2360155 MS.gene050538:CDS 35.0%
!! CCATGTATGTCACTTTCAAT+TGG + chr7.4:2361026-2361045 MS.gene050538:intron 35.0%
!! CCTCAGTGTTAGATTGATTT+TGG + chr7.4:2360234-2360253 MS.gene050538:intron 35.0%
!! GATGTTTTTCGAAGGTATAG+AGG + chr7.4:2360265-2360284 MS.gene050538:intron 35.0%
!!! ATATTTTGGTGGAGAGACTA+AGG + chr7.4:2358911-2358930 MS.gene050538:intron 35.0%
!!! TATTTTGGTGGAGAGACTAA+GGG + chr7.4:2358912-2358931 MS.gene050538:intron 35.0%
!!! TGAGCCATGTTTTGTTTATC+AGG + chr7.4:2360434-2360453 MS.gene050538:intron 35.0%
AAAACAGAACAAGGTTCCAC+AGG + chr7.4:2360159-2360178 MS.gene050538:CDS 40.0%
AAAATTTCACCACCTACCTG+TGG - chr7.4:2360178-2360197 None:intergenic 40.0%
AAGTGCCACATCCCATTAAA+TGG - chr7.4:2359543-2359562 None:intergenic 40.0%
ACTGTAGGAGAGTTGAAGAA+TGG + chr7.4:2358610-2358629 MS.gene050538:CDS 40.0%
AGCTATATATCTTGGAGGAG+AGG - chr7.4:2358659-2358678 None:intergenic 40.0%
ATGAGTTTCAACCACTGGAA+GGG + chr7.4:2361267-2361286 MS.gene050538:CDS 40.0%
ATGTGGCACTTGAGTGAAAA+TGG + chr7.4:2359552-2359571 MS.gene050538:CDS 40.0%
ATTAAGTATGGAGCTGTGGA+GGG - chr7.4:2358178-2358197 None:intergenic 40.0%
ATTGGACAATTCCCAGGTTT+GGG + chr7.4:2361296-2361315 MS.gene050538:CDS 40.0%
CAAACGCACCCTAAATTGAT+TGG + chr7.4:2359277-2359296 MS.gene050538:intron 40.0%
CAGTAAAAAACTGAGCAGCA+TGG - chr7.4:2358519-2358538 None:intergenic 40.0%
CATGATATTGGACAATTCCC+AGG + chr7.4:2361290-2361309 MS.gene050538:CDS 40.0%
CCAAGATATATAGCTACTCG+TGG + chr7.4:2358664-2358683 MS.gene050538:CDS 40.0%
CCACGAGTAGCTATATATCT+TGG - chr7.4:2358667-2358686 None:intergenic 40.0%
CGAATCAAATGAACCGGAAA+GGG - chr7.4:2359845-2359864 None:intergenic 40.0%
CGAGTAGCTATATATCTTGG+AGG - chr7.4:2358664-2358683 None:intergenic 40.0%
CTCACAAAAGCTCCTTCAAA+AGG - chr7.4:2360034-2360053 None:intergenic 40.0%
CTGAACAAAAACATGTCAGG+AGG - chr7.4:2360628-2360647 None:intergenic 40.0%
GAATCATGAGTTTCAACCAC+TGG + chr7.4:2361262-2361281 MS.gene050538:CDS 40.0%
GATGGACGGTTGATTAAGTA+TGG - chr7.4:2358190-2358209 None:intergenic 40.0%
GCAGACTATATCCAAAGTCT+CGG + chr7.4:2361209-2361228 MS.gene050538:CDS 40.0%
GCTATATATCTTGGAGGAGA+GGG - chr7.4:2358658-2358677 None:intergenic 40.0%
GCTATCTTCTTAGACAAACG+CGG + chr7.4:2358406-2358425 MS.gene050538:CDS 40.0%
GGCTGGAATTGAGTTCAATA+TGG + chr7.4:2359954-2359973 MS.gene050538:CDS 40.0%
GTTGATTAAGTATGGAGCTG+TGG - chr7.4:2358182-2358201 None:intergenic 40.0%
TAACCGCTTGCTTATGACAT+CGG + chr7.4:2359774-2359793 MS.gene050538:CDS 40.0%
TATTGGACAATTCCCAGGTT+TGG + chr7.4:2361295-2361314 MS.gene050538:CDS 40.0%
TCCAATTTACTGATCCAGCA+CGG - chr7.4:2359519-2359538 None:intergenic 40.0%
TCCTACTGTTACAGCAACAA+GGG + chr7.4:2360464-2360483 MS.gene050538:CDS 40.0%
TCGAATCAAATGAACCGGAA+AGG - chr7.4:2359846-2359865 None:intergenic 40.0%
TGTGGCACTTGAGTGAAAAT+GGG + chr7.4:2359553-2359572 MS.gene050538:CDS 40.0%
TGTTACAGCAACAAGGGTAA+AGG + chr7.4:2360470-2360489 MS.gene050538:CDS 40.0%
TGTTTGGTTGGATAAGGGTT+TGG + chr7.4:2358570-2358589 MS.gene050538:CDS 40.0%
TTCCTACTGTTACAGCAACA+AGG + chr7.4:2360463-2360482 MS.gene050538:CDS 40.0%
TTCCTCAAACGCTGCTAAAA+GGG - chr7.4:2359981-2360000 None:intergenic 40.0%
TTCTACTGTCCATTGTTCAG+AGG + chr7.4:2359933-2359952 MS.gene050538:intron 40.0%
TTTACGAGAAGTTCCGTAAG+AGG - chr7.4:2358278-2358297 None:intergenic 40.0%
! ATAAGGGTTTGGTTCGAGAA+TGG + chr7.4:2358581-2358600 MS.gene050538:CDS 40.0%
! CATCTTTGATCCCTTTGGAA+GGG + chr7.4:2360930-2360949 MS.gene050538:CDS 40.0%
! CTATTTCTCTATTTGCCGAC+AGG + chr7.4:2359742-2359761 MS.gene050538:intron 40.0%
! GAGGAATTGATTCAGTGTCA+TGG + chr7.4:2360053-2360072 MS.gene050538:CDS 40.0%
! GCAATTGTTGTTGCACACAA+TGG + chr7.4:2359597-2359616 MS.gene050538:CDS 40.0%
! GCTGCTAGGTTCTAATATAG+AGG + chr7.4:2360972-2360991 MS.gene050538:CDS 40.0%
! GTTTTCGACACTGGTATTCA+TGG + chr7.4:2358442-2358461 MS.gene050538:CDS 40.0%
! TGGTTTTTCCATTTTCACCG+TGG - chr7.4:2358230-2358249 None:intergenic 40.0%
! TTTGAAGGAGCTTTTGTGAG+AGG + chr7.4:2360034-2360053 MS.gene050538:CDS 40.0%
!! AGTGACTTGCTCTTGTTTGA+AGG - chr7.4:2358317-2358336 None:intergenic 40.0%
!! ATTCCTTACTCTCTGAGGTT+AGG + chr7.4:2358704-2358723 MS.gene050538:intron 40.0%
!! CTCCTGACATGTTTTTGTTC+AGG + chr7.4:2360626-2360645 MS.gene050538:intron 40.0%
!!! TAGATTGATTTTGGGGTTGC+TGG + chr7.4:2360243-2360262 MS.gene050538:intron 40.0%
AAACCAACAGCAAACTCTCC+AGG - chr7.4:2361242-2361261 None:intergenic 45.0%
AACCAACAGCAAACTCTCCA+GGG - chr7.4:2361241-2361260 None:intergenic 45.0%
AACCCGATGTCATAAGCAAG+CGG - chr7.4:2359780-2359799 None:intergenic 45.0%
AACCGCTTGCTTATGACATC+GGG + chr7.4:2359775-2359794 MS.gene050538:CDS 45.0%
ACAGCAACAAGGGTAAAGGA+AGG + chr7.4:2360474-2360493 MS.gene050538:CDS 45.0%
ACCCTTGTTGCTGTAACAGT+AGG - chr7.4:2360468-2360487 None:intergenic 45.0%
ACCGTGCTGGATCAGTAAAT+TGG + chr7.4:2359515-2359534 MS.gene050538:CDS 45.0%
AGTGAAAATGGGAAACCTCG+TGG + chr7.4:2359564-2359583 MS.gene050538:CDS 45.0%
AGTGTAGGACATTCCCTTTC+CGG + chr7.4:2359829-2359848 MS.gene050538:intron 45.0%
ATAGAGGCAGCAGTCATAAG+TGG + chr7.4:2360988-2361007 MS.gene050538:CDS 45.0%
ATTGCATCAAACTTCCCACG+AGG - chr7.4:2359582-2359601 None:intergenic 45.0%
CAACCCTTTCGATAATCCGA+GGG - chr7.4:2360523-2360542 None:intergenic 45.0%
CAACCTAACCTCAGAGAGTA+AGG - chr7.4:2358710-2358729 None:intergenic 45.0%
CAATTCCAGCCTCTGAACAA+TGG - chr7.4:2359945-2359964 None:intergenic 45.0%
CATGAGTTTCAACCACTGGA+AGG + chr7.4:2361266-2361285 MS.gene050538:CDS 45.0%
CCAAAGGGATCAAAGATGCA+AGG - chr7.4:2360928-2360947 None:intergenic 45.0%
CCTTGCATCTTTGATCCCTT+TGG + chr7.4:2360925-2360944 MS.gene050538:CDS 45.0%
CTTAGAAAGGTCCAACAGTG+AGG - chr7.4:2360124-2360143 None:intergenic 45.0%
CTTGGAGGAGAGGGTAAAAA+TGG - chr7.4:2358649-2358668 None:intergenic 45.0%
GAAGATAGCGCAAATGAGAC+CGG - chr7.4:2358395-2358414 None:intergenic 45.0%
GACACTGGTATTCATGGTCT+TGG + chr7.4:2358448-2358467 MS.gene050538:CDS 45.0%
GATTAAGTATGGAGCTGTGG+AGG - chr7.4:2358179-2358198 None:intergenic 45.0%
GCATCTTTGATCCCTTTGGA+AGG + chr7.4:2360929-2360948 MS.gene050538:CDS 45.0%
GTAGGAGAGTTGAAGAATGG+TGG + chr7.4:2358613-2358632 MS.gene050538:CDS 45.0%
GTGAAAATGGGAAACCTCGT+GGG + chr7.4:2359565-2359584 MS.gene050538:CDS 45.0%
GTTCCTCAAACGCTGCTAAA+AGG - chr7.4:2359982-2360001 None:intergenic 45.0%
TCAAAGATGCAAGGAACTCC+AGG - chr7.4:2360919-2360938 None:intergenic 45.0%
TGGAGCCATTTAATGGGATG+TGG + chr7.4:2359535-2359554 MS.gene050538:CDS 45.0%
TTCCGTAAGAGGATCTTCTG+CGG - chr7.4:2358267-2358286 None:intergenic 45.0%
TTGGACAATTCCCAGGTTTG+GGG + chr7.4:2361297-2361316 MS.gene050538:CDS 45.0%
TTGGAGGAAGATTGGGAACA+AGG + chr7.4:2358467-2358486 MS.gene050538:CDS 45.0%
TTTCTTCTGACCCCAAACCT+GGG - chr7.4:2361310-2361329 None:intergenic 45.0%
! AATACCAGTGTCGAAAACGG+TGG - chr7.4:2358440-2358459 None:intergenic 45.0%
! ACTGGTATTCATGGTCTTGG+AGG + chr7.4:2358451-2358470 MS.gene050538:CDS 45.0%
! AGTTCTCGTGTAGACTAGCT+TGG + chr7.4:2359479-2359498 MS.gene050538:intron 45.0%
! ATATGTGGTGATTGGCTGCT+AGG + chr7.4:2360958-2360977 MS.gene050538:CDS 45.0%
! CATGGTCTTGGAGGAAGATT+GGG + chr7.4:2358460-2358479 MS.gene050538:CDS 45.0%
! CGGTTAGCACATTTTCCTGT+CGG - chr7.4:2359760-2359779 None:intergenic 45.0%
! GGTTTGGTTCGAGAATGGAA+GGG + chr7.4:2358586-2358605 MS.gene050538:CDS 45.0%
! GTAAAGGAAGGCATGCTAGA+AGG + chr7.4:2360486-2360505 MS.gene050538:CDS 45.0%
! TCATGGTCTTGGAGGAAGAT+TGG + chr7.4:2358459-2358478 MS.gene050538:CDS 45.0%
! TTTTCTTCTGACCCCAAACC+TGG - chr7.4:2361311-2361330 None:intergenic 45.0%
!! GACTAAGGGTGCGTTTGTTT+TGG + chr7.4:2358926-2358945 MS.gene050538:intron 45.0%
!! GGTTGCTGGATGTTTTTCGA+AGG + chr7.4:2360257-2360276 MS.gene050538:intron 45.0%
!! GTAGACTAGCTTGGTGAATG+TGG + chr7.4:2359488-2359507 MS.gene050538:intron 45.0%
!! TGCTGATTCCTTACTCTCTG+AGG + chr7.4:2358699-2358718 MS.gene050538:CDS 45.0%
!! TAAATTAAAAAAAAAAATTG+TGG - chr7.4:2361078-2361097 None:intergenic 5.0%
!!! TTTTTTTTTAATTTAGTAAT+TGG + chr7.4:2361083-2361102 MS.gene050538:intron 5.0%
AACAAGGTTCCACAGGTAGG+TGG + chr7.4:2360166-2360185 MS.gene050538:intron 50.0%
ACAAGTGGTTCGTCGGAGAA+AGG - chr7.4:2358349-2358368 None:intergenic 50.0%
ACATATCCCAGCCCTTCCAA+AGG - chr7.4:2360944-2360963 None:intergenic 50.0%
ACTGTCCATTGTTCAGAGGC+TGG + chr7.4:2359937-2359956 MS.gene050538:intron 50.0%
CAGAACAAGGTTCCACAGGT+AGG + chr7.4:2360163-2360182 MS.gene050538:intron 50.0%
CATATCCCAGCCCTTCCAAA+GGG - chr7.4:2360943-2360962 None:intergenic 50.0%
CCAATATCATGCCCTTCCAG+TGG - chr7.4:2361281-2361300 None:intergenic 50.0%
CTGCCCTCGGATTATCGAAA+GGG + chr7.4:2360517-2360536 MS.gene050538:CDS 50.0%
CTGGGAAGCCAGCAATTTCT+TGG - chr7.4:2360092-2360111 None:intergenic 50.0%
GAACCACTTGTCGGCATCAT+CGG + chr7.4:2358358-2358377 MS.gene050538:CDS 50.0%
GCAACCCTTTCGATAATCCG+AGG - chr7.4:2360524-2360543 None:intergenic 50.0%
GCTCTTCCAACTAACACACC+TGG + chr7.4:2360898-2360917 MS.gene050538:CDS 50.0%
GGAACTCCAGGTGTGTTAGT+TGG - chr7.4:2360907-2360926 None:intergenic 50.0%
TCCGTAAGAGGATCTTCTGC+GGG - chr7.4:2358266-2358285 None:intergenic 50.0%
TTCTCCGACGAACCACTTGT+CGG + chr7.4:2358349-2358368 MS.gene050538:CDS 50.0%
TTTGGAAGGGCTGGGATATG+TGG + chr7.4:2360943-2360962 MS.gene050538:CDS 50.0%
! CCACTGGAAGGGCATGATAT+TGG + chr7.4:2361278-2361297 MS.gene050538:CDS 50.0%
! GGGTTTGGTTCGAGAATGGA+AGG + chr7.4:2358585-2358604 MS.gene050538:CDS 50.0%
! TTCCATTTTCACCGTGGCGA+CGG - chr7.4:2358224-2358243 None:intergenic 50.0%
! TTGATCCCTTTGGAAGGGCT+GGG + chr7.4:2360935-2360954 MS.gene050538:CDS 50.0%
! TTTGATCCCTTTGGAAGGGC+TGG + chr7.4:2360934-2360953 MS.gene050538:CDS 50.0%
!! AGGCATGCTAGAAGGTGTTG+AGG + chr7.4:2360494-2360513 MS.gene050538:CDS 50.0%
!! CGAGAATGGAAGGGTACTGT+AGG + chr7.4:2358595-2358614 MS.gene050538:CDS 50.0%
AACAGTGAGGACCGTCACTC+TGG - chr7.4:2360111-2360130 None:intergenic 55.0%
ACAGTGAGGACCGTCACTCT+GGG - chr7.4:2360110-2360129 None:intergenic 55.0%
AGAGGATCTTCTGCGGGGTT+TGG - chr7.4:2358260-2358279 None:intergenic 55.0%
AGAGTGACGGTCCTCACTGT+TGG + chr7.4:2360110-2360129 MS.gene050538:CDS 55.0%
ATCATCGGCGGTGGTATCTC+CGG + chr7.4:2358373-2358392 MS.gene050538:CDS 55.0%
CAAAGTCTCGGAACTGACCC+TGG + chr7.4:2361221-2361240 MS.gene050538:CDS 55.0%
CAGGGTCAGTTCCGAGACTT+TGG - chr7.4:2361223-2361242 None:intergenic 55.0%
CCCCGCAGAAGATCCTCTTA+CGG + chr7.4:2358262-2358281 MS.gene050538:CDS 55.0%
CCGTAAGAGGATCTTCTGCG+GGG - chr7.4:2358265-2358284 None:intergenic 55.0%
GATCTTCTGCGGGGTTTGGA+GGG - chr7.4:2358256-2358275 None:intergenic 55.0%
GATGCCGACAAGTGGTTCGT+CGG - chr7.4:2358356-2358375 None:intergenic 55.0%
GCTGCCCTCGGATTATCGAA+AGG + chr7.4:2360516-2360535 MS.gene050538:CDS 55.0%
GGGCTGGGATATGTGGTGAT+TGG + chr7.4:2360950-2360969 MS.gene050538:CDS 55.0%
TGAATGTGGAGAGACCGTGC+TGG + chr7.4:2359502-2359521 MS.gene050538:CDS 55.0%
TGGTTCGTCGGAGAAAGGAG+CGG - chr7.4:2358344-2358363 None:intergenic 55.0%
! GGCCCTTTTAGCAGCGTTTG+AGG + chr7.4:2359976-2359995 MS.gene050538:CDS 55.0%
!! GACCCTGGAGAGTTTGCTGT+TGG + chr7.4:2361236-2361255 MS.gene050538:CDS 55.0%
!! TTGCTGGCTTCCCAGAGTGA+CGG + chr7.4:2360097-2360116 MS.gene050538:CDS 55.0%
CCACTTGTCGGCATCATCGG+CGG + chr7.4:2358361-2358380 MS.gene050538:CDS 60.0%
CGGCGGTTGAGGAAGATGGA+CGG - chr7.4:2358204-2358223 None:intergenic 60.0%
GGATCTTCTGCGGGGTTTGG+AGG - chr7.4:2358257-2358276 None:intergenic 60.0%
! CATTTTCACCGTGGCGACGG+CGG - chr7.4:2358221-2358240 None:intergenic 60.0%
! CGCTCCACCGTTTTCGACAC+TGG + chr7.4:2358433-2358452 MS.gene050538:CDS 60.0%
!! GAAGGTGTTGAGGCTGCCCT+CGG + chr7.4:2360504-2360523 MS.gene050538:CDS 60.0%
CCGCCGATGATGCCGACAAG+TGG - chr7.4:2358364-2358383 None:intergenic 65.0%
CGCCGTCGCCACGGTGAAAA+TGG + chr7.4:2358219-2358238 MS.gene050538:CDS 65.0%
CTTCTGCGGGGTTTGGAGGG+TGG - chr7.4:2358253-2358272 None:intergenic 65.0%
CTTGTCGGCATCATCGGCGG+TGG + chr7.4:2358364-2358383 MS.gene050538:CDS 65.0%
GCGACGGCGGTTGAGGAAGA+TGG - chr7.4:2358208-2358227 None:intergenic 65.0%
TTCCTCAACCGCCGTCGCCA+CGG + chr7.4:2358210-2358229 MS.gene050538:CDS 65.0%
CTGCGGGGTTTGGAGGGTGG+TGG - chr7.4:2358250-2358269 None:intergenic 70.0%
CACCGTGGCGACGGCGGTTG+AGG - chr7.4:2358215-2358234 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 2358139 2361367 2358139 ID=MS.gene050538
chr7.4 mRNA 2358139 2361367 2358139 ID=MS.gene050538.t1;Parent=MS.gene050538
chr7.4 exon 2358139 2358720 2358139 ID=MS.gene050538.t1.exon1;Parent=MS.gene050538.t1
chr7.4 CDS 2358139 2358720 2358139 ID=cds.MS.gene050538.t1;Parent=MS.gene050538.t1
chr7.4 exon 2359492 2359618 2359492 ID=MS.gene050538.t1.exon2;Parent=MS.gene050538.t1
chr7.4 CDS 2359492 2359618 2359492 ID=cds.MS.gene050538.t1;Parent=MS.gene050538.t1
chr7.4 exon 2359764 2359825 2359764 ID=MS.gene050538.t1.exon3;Parent=MS.gene050538.t1
chr7.4 CDS 2359764 2359825 2359764 ID=cds.MS.gene050538.t1;Parent=MS.gene050538.t1
chr7.4 exon 2359953 2360180 2359953 ID=MS.gene050538.t1.exon4;Parent=MS.gene050538.t1
chr7.4 CDS 2359953 2360180 2359953 ID=cds.MS.gene050538.t1;Parent=MS.gene050538.t1
chr7.4 exon 2360456 2360577 2360456 ID=MS.gene050538.t1.exon5;Parent=MS.gene050538.t1
chr7.4 CDS 2360456 2360577 2360456 ID=cds.MS.gene050538.t1;Parent=MS.gene050538.t1
chr7.4 exon 2360891 2361029 2360891 ID=MS.gene050538.t1.exon6;Parent=MS.gene050538.t1
chr7.4 CDS 2360891 2361029 2360891 ID=cds.MS.gene050538.t1;Parent=MS.gene050538.t1
chr7.4 exon 2361206 2361367 2361206 ID=MS.gene050538.t1.exon7;Parent=MS.gene050538.t1
chr7.4 CDS 2361206 2361367 2361206 ID=cds.MS.gene050538.t1;Parent=MS.gene050538.t1
Gene Sequence

>MS.gene050538

ATGTTTGGTCTGAATATGAAAACATGGAAATTGTTACCCTCCACAGCTCCATACTTAATCAACCGTCCATCTTCCTCAACCGCCGTCGCCACGGTGAAAATGGAAAAACCACCACCCTCCAAACCCCGCAGAAGATCCTCTTACGGAACTTCTCGTAAATCAATTCTCAAAAAAACCTTCAAACAAGAGCAAGTCACTTTCACCGCTCCTTTCTCCGACGAACCACTTGTCGGCATCATCGGCGGTGGTATCTCCGGTCTCATTTGCGCTATCTTCTTAGACAAACGCGGCATTCGCTCCACCGTTTTCGACACTGGTATTCATGGTCTTGGAGGAAGATTGGGAACAAGGCTTATTGATGATTCTTTGGTTTTTGACCATGCTGCTCAGTTTTTTACTGTCAATGATTCTCGTTTTGCTGAAATTGTTAATGTTTGGTTGGATAAGGGTTTGGTTCGAGAATGGAAGGGTACTGTAGGAGAGTTGAAGAATGGTGGTGAATTTCTTCCATTTTTACCCTCTCCTCCAAGATATATAGCTACTCGTGGAATGCGCTTTCTTGCTGATTCCTTACTCTCTGAGGTTAGGTTGTTCCTTATTATCAACAATCTAGTCCCTTAAATTGAAAAACGTCTCTCCATTTGGTCATTTTTCCAAATATAACACTACAGATACAATTTTAAAGGTTTTATATTTGTCTTGACCTAACAAGACATCATTGAAATCAATATGTATAACCTTTCATAGGTTTTAATGGGTGCTTGTTAGAGAGATATTTTGGTGGAGAGACTAAGGGTGCGTTTGTTTTGGATTTTTTCCAAAAAAAATCTATTTTTTTCTTTAAAAAAATCACTTTTTTCATTTTTAAGTGTTTGTTTTGGATTTTTAGAAAAATCATTTTATCAAAAAAATCTATTTTGATCCTAAAATGAAAAGCTATTAGGATTAGCTTTTCTCAAAATCTATTTTTTTCAACAACAAGGAGATAACACATGTGCATGTTAGAACTTATTTTTTTAACAAAATGGATTTTTATGGATAGTAGGCAAACACAAATAACTTTAGATTTTTTTTAAAATCTCTAAAAAAAAATCTCTAGATTCTTTTGACACAAAATCTATTTTTTTTAAAGCTGAAACAAACGCACCCTAAATTGATTGGCATTGTTTAATTTAAGGGACTAACTTAAATATTAATGAAAGTTGAGGGATTAAATTACTCGACCTTTACAATTTGAAGGACCAAGATTATCGTTAAGTTTTTCTAACTTTTGTGCTGCTATAGTTCTTAGATTTTGGTTTTTTGCTGTGGTTCCCATGTTATTTTTGTGTTAAGAAACTAGTTCTCGTGTAGACTAGCTTGGTGAATGTGGAGAGACCGTGCTGGATCAGTAAATTGGAGCCATTTAATGGGATGTGGCACTTGAGTGAAAATGGGAAACCTCGTGGGAAGTTTGATGCAATTGTTGTTGCACACAATGGTAACTTGATAATGTCTTTATTTTTTCTCTTCAAAAATAATATCTTACAAGTTCCGTTTTTACACATTTTTCAGTATGGAGTATTTATATGTATAGTTATCCGACTTATGGCTTCTTTAGTAACTATTTCTCTATTTGCCGACAGGAAAATGTGCTAACCGCTTGCTTATGACATCGGGTTTGCCATTAATTGCTAAACAAATGAAGGTCAGTGTAGGACATTCCCTTTCCGGTTCATTTGATTCGATAAACTAGTACTCAATTTTTAGCTTTATCTATTATTATATTCGTACTCATACCACCTATTGTTTCTATTCTACTGTCCATTGTTCAGAGGCTGGAATTGAGTTCAATATGGGCCCTTTTAGCAGCGTTTGAGGAACCTCTTCCTTTTCTAGAGAATACAGAAGTTCCTTTTGAAGGAGCTTTTGTGAGAGGAATTGATTCAGTGTCATGGATGGCCAATAATACCAAGAAATTGCTGGCTTCCCAGAGTGACGGTCCTCACTGTTGGACCTTTCTAAGTACTGCTGCTTATGGAAAACAGAACAAGGTTCCACAGGTAGGTGGTGAAATTTTCAAAACAGAATGATATTACGATATAAAAATTAGTTTCCTCAGTGTTAGATTGATTTTGGGGTTGCTGGATGTTTTTCGAAGGTATAGAGGAGTAATATATTGGTATTGACTCACAATTACCTTACCTAGAATAATATTTGCCAGGGATTTGATTAAAATTTATAGAAGTTATGATAACCCATGCATTTTCATTTGTGTATTGCATGCGATGATCAGAACTTTTAATAACTGAAATGTGAGCCATGTTTTGTTTATCAGGAAAATATTCCTACTGTTACAGCAACAAGGGTAAAGGAAGGCATGCTAGAAGGTGTTGAGGCTGCCCTCGGATTATCGAAAGGGTTGCTTCCTAAACCTTTTTATACGAAGCTCCAACTATGGTAAGAGTCAAAGTATTAGTATTAGTTGCTTAATTGCTTTGAAATGTCCTCCTGACATGTTTTTGTTCAGGTTAGACTTACAGAGTTTTCTTATTGTTTGTGACTTCTCAAATGCACAGTTGCTTGAATCAAAATATTAAATACACGTGCTCTCTGAGTAGCATTTCTTGCGTGATAGTTTTCAGTGACAGCTATGTTGTCAACAAATCAGACGGTCTAATTTAACATCGATAGATTATCTAAAACATCCGCAGCTCTAAACATTGTAAGTAAACTTAAAAGGTTTAAAATCGTATTATTCTGAGATTTTCAGGGGTGCAGCTCTTCCAACTAACACACCTGGAGTTCCTTGCATCTTTGATCCCTTTGGAAGGGCTGGGATATGTGGTGATTGGCTGCTAGGTTCTAATATAGAGGCAGCAGTCATAAGTGGAATTGCTCTAGCTAACCATGTATGTCACTTTCAATTGGACCTTCTAATTTACGTGGTTTGTTCGCCACAATTTTTTTTTTTAATTTAGTAATTGGACAACTTCACCATTAGTAGTAATTCATGTTTATCAAATTGTGAAAAGCTTTGACAATGCCCTTTTGTTGTTCAAAATTGTGTTTGGACATTTTGACACAGATTGCAGACTATATCCAAAGTCTCGGAACTGACCCTGGAGAGTTTGCTGTTGGTTTGAATCATGAGTTTCAACCACTGGAAGGGCATGATATTGGACAATTCCCAGGTTTGGGGTCAGAAGAAAAGATGACTGAAGCCCAAGTATATGAACTTGCCAAGTAG

Protein sequence

>MS.gene050538.t1

MFGLNMKTWKLLPSTAPYLINRPSSSTAVATVKMEKPPPSKPRRRSSYGTSRKSILKKTFKQEQVTFTAPFSDEPLVGIIGGGISGLICAIFLDKRGIRSTVFDTGIHGLGGRLGTRLIDDSLVFDHAAQFFTVNDSRFAEIVNVWLDKGLVREWKGTVGELKNGGEFLPFLPSPPRYIATRGMRFLADSLLSETSLVNVERPCWISKLEPFNGMWHLSENGKPRGKFDAIVVAHNGKCANRLLMTSGLPLIAKQMKRLELSSIWALLAAFEEPLPFLENTEVPFEGAFVRGIDSVSWMANNTKKLLASQSDGPHCWTFLSTAAYGKQNKVPQENIPTVTATRVKEGMLEGVEAALGLSKGLLPKPFYTKLQLWGAALPTNTPGVPCIFDPFGRAGICGDWLLGSNIEAAVISGIALANHIADYIQSLGTDPGEFAVGLNHEFQPLEGHDIGQFPGLGSEEKMTEAQVYELAK