Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84585.t1 | XP_003624306.1 | 90.8 | 292 | 27 | 0 | 12 | 303 | 494 | 785 | 7.60E-149 | 536.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84585.t1 | I1N462 | 71.0 | 310 | 82 | 2 | 2 | 303 | 480 | 789 | 2.5e-124 | 446.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84585.t1 | G7KTF6 | 90.8 | 292 | 27 | 0 | 12 | 303 | 494 | 785 | 5.5e-149 | 536.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049611 | MS.gene84585 | 0.816146 | 6.43E-52 | -1.69E-46 |
MS.gene050338 | MS.gene84585 | 0.836777 | 7.67E-57 | -1.69E-46 |
MS.gene050444 | MS.gene84585 | -0.828168 | 1.04E-54 | -1.69E-46 |
MS.gene05079 | MS.gene84585 | 0.837631 | 4.64E-57 | -1.69E-46 |
MS.gene050809 | MS.gene84585 | 0.809175 | 2.15E-50 | -1.69E-46 |
MS.gene05104 | MS.gene84585 | 0.820515 | 6.59E-53 | -1.69E-46 |
MS.gene051138 | MS.gene84585 | 0.833172 | 6.21E-56 | -1.69E-46 |
MS.gene051422 | MS.gene84585 | 0.815845 | 7.50E-52 | -1.69E-46 |
MS.gene051651 | MS.gene84585 | 0.841582 | 4.35E-58 | -1.69E-46 |
MS.gene051874 | MS.gene84585 | -0.800231 | 1.59E-48 | -1.69E-46 |
MS.gene052129 | MS.gene84585 | 0.83834 | 3.05E-57 | -1.69E-46 |
MS.gene05240 | MS.gene84585 | 0.80743 | 5.08E-50 | -1.69E-46 |
MS.gene052702 | MS.gene84585 | 0.801551 | 8.54E-49 | -1.69E-46 |
MS.gene052805 | MS.gene84585 | 0.813234 | 2.84E-51 | -1.69E-46 |
MS.gene053420 | MS.gene84585 | 0.815218 | 1.03E-51 | -1.69E-46 |
MS.gene053887 | MS.gene84585 | 0.806067 | 9.85E-50 | -1.69E-46 |
MS.gene056198 | MS.gene84585 | 0.804604 | 1.99E-49 | -1.69E-46 |
MS.gene056224 | MS.gene84585 | 0.803417 | 3.52E-49 | -1.69E-46 |
MS.gene056697 | MS.gene84585 | 0.831065 | 2.06E-55 | -1.69E-46 |
MS.gene056856 | MS.gene84585 | 0.86002 | 2.76E-63 | -1.69E-46 |
MS.gene056857 | MS.gene84585 | 0.814893 | 1.22E-51 | -1.69E-46 |
MS.gene057549 | MS.gene84585 | 0.828347 | 9.46E-55 | -1.69E-46 |
MS.gene057717 | MS.gene84585 | 0.808722 | 2.69E-50 | -1.69E-46 |
MS.gene057768 | MS.gene84585 | 0.814874 | 1.23E-51 | -1.69E-46 |
MS.gene058067 | MS.gene84585 | 0.827389 | 1.61E-54 | -1.69E-46 |
MS.gene058068 | MS.gene84585 | 0.837037 | 6.58E-57 | -1.69E-46 |
MS.gene058099 | MS.gene84585 | 0.806118 | 9.61E-50 | -1.69E-46 |
MS.gene058382 | MS.gene84585 | 0.820768 | 5.76E-53 | -1.69E-46 |
MS.gene058603 | MS.gene84585 | 0.813515 | 2.46E-51 | -1.69E-46 |
MS.gene059069 | MS.gene84585 | 0.803628 | 3.18E-49 | -1.69E-46 |
MS.gene059070 | MS.gene84585 | 0.808137 | 3.59E-50 | -1.69E-46 |
MS.gene05926 | MS.gene84585 | 0.825871 | 3.70E-54 | -1.69E-46 |
MS.gene059699 | MS.gene84585 | 0.814226 | 1.72E-51 | -1.69E-46 |
MS.gene059703 | MS.gene84585 | 0.800953 | 1.13E-48 | -1.69E-46 |
MS.gene060405 | MS.gene84585 | 0.837394 | 5.33E-57 | -1.69E-46 |
MS.gene061044 | MS.gene84585 | 0.803621 | 3.19E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84585.t1 | MTR_7g081420 | 90.753 | 292 | 27 | 0 | 12 | 303 | 496 | 787 | 0.0 | 550 |
MS.gene84585.t1 | MTR_7g081500 | 90.753 | 292 | 27 | 0 | 12 | 303 | 494 | 785 | 0.0 | 532 |
MS.gene84585.t1 | MTR_7g081380 | 84.642 | 293 | 44 | 1 | 12 | 303 | 517 | 809 | 5.22e-176 | 507 |
MS.gene84585.t1 | MTR_7g081750 | 83.219 | 292 | 49 | 0 | 12 | 303 | 509 | 800 | 1.48e-174 | 503 |
MS.gene84585.t1 | MTR_7g081580 | 84.321 | 287 | 45 | 0 | 17 | 303 | 500 | 786 | 1.11e-173 | 501 |
MS.gene84585.t1 | MTR_7g481600 | 84.321 | 287 | 45 | 0 | 17 | 303 | 500 | 786 | 1.15e-165 | 481 |
MS.gene84585.t1 | MTR_5g085690 | 62.081 | 298 | 106 | 5 | 7 | 300 | 494 | 788 | 5.09e-119 | 360 |
MS.gene84585.t1 | MTR_5g096750 | 56.679 | 277 | 105 | 5 | 30 | 303 | 503 | 767 | 5.11e-100 | 310 |
MS.gene84585.t1 | MTR_7g081660 | 82.967 | 182 | 31 | 0 | 122 | 303 | 374 | 555 | 1.56e-98 | 301 |
MS.gene84585.t1 | MTR_4g103400 | 53.929 | 280 | 123 | 6 | 19 | 295 | 494 | 770 | 1.48e-93 | 293 |
MS.gene84585.t1 | MTR_3g082200 | 51.761 | 284 | 132 | 5 | 19 | 301 | 353 | 632 | 6.83e-93 | 288 |
MS.gene84585.t1 | MTR_3g082200 | 51.761 | 284 | 132 | 5 | 19 | 301 | 368 | 647 | 7.31e-93 | 288 |
MS.gene84585.t1 | MTR_3g061110 | 52.797 | 286 | 129 | 6 | 19 | 302 | 473 | 754 | 2.64e-92 | 290 |
MS.gene84585.t1 | MTR_3g082200 | 51.761 | 284 | 132 | 5 | 19 | 301 | 491 | 770 | 4.75e-92 | 289 |
MS.gene84585.t1 | MTR_7g098070 | 55.396 | 278 | 116 | 7 | 24 | 300 | 491 | 761 | 1.43e-90 | 285 |
MS.gene84585.t1 | MTR_4g103495 | 51.557 | 289 | 134 | 6 | 16 | 301 | 339 | 624 | 1.84e-90 | 281 |
MS.gene84585.t1 | MTR_4g134320 | 55.678 | 273 | 113 | 7 | 29 | 300 | 500 | 765 | 2.12e-90 | 285 |
MS.gene84585.t1 | MTR_4g103430 | 51.724 | 290 | 124 | 8 | 19 | 300 | 487 | 768 | 4.96e-89 | 281 |
MS.gene84585.t1 | MTR_5g055920 | 50.350 | 286 | 136 | 6 | 19 | 301 | 385 | 667 | 4.46e-88 | 276 |
MS.gene84585.t1 | MTR_4g103490 | 50.350 | 286 | 136 | 6 | 19 | 301 | 502 | 784 | 1.88e-86 | 275 |
MS.gene84585.t1 | MTR_4g103480 | 49.650 | 286 | 138 | 6 | 19 | 301 | 505 | 787 | 6.07e-86 | 274 |
MS.gene84585.t1 | MTR_4g103450 | 49.301 | 286 | 139 | 6 | 19 | 301 | 462 | 744 | 3.54e-84 | 268 |
MS.gene84585.t1 | MTR_4g103495 | 54.237 | 236 | 104 | 4 | 16 | 250 | 488 | 720 | 5.38e-76 | 247 |
MS.gene84585.t1 | MTR_4g095360 | 46.953 | 279 | 138 | 6 | 29 | 300 | 479 | 754 | 7.73e-76 | 246 |
MS.gene84585.t1 | MTR_5g016120 | 46.099 | 282 | 142 | 6 | 29 | 303 | 485 | 763 | 1.08e-74 | 243 |
MS.gene84585.t1 | MTR_5g025010 | 48.084 | 287 | 133 | 8 | 18 | 301 | 445 | 718 | 5.36e-74 | 241 |
MS.gene84585.t1 | MTR_5g025010 | 48.084 | 287 | 133 | 8 | 18 | 301 | 477 | 750 | 7.77e-74 | 241 |
MS.gene84585.t1 | MTR_8g072440 | 45.455 | 286 | 140 | 4 | 18 | 301 | 440 | 711 | 4.37e-73 | 238 |
MS.gene84585.t1 | MTR_0047s0120 | 46.099 | 282 | 142 | 6 | 29 | 303 | 481 | 759 | 6.51e-73 | 239 |
MS.gene84585.t1 | MTR_8g072440 | 45.455 | 286 | 140 | 4 | 18 | 301 | 482 | 753 | 7.65e-73 | 238 |
MS.gene84585.t1 | MTR_8g024380 | 44.000 | 300 | 155 | 7 | 10 | 300 | 463 | 758 | 1.27e-72 | 238 |
MS.gene84585.t1 | MTR_3g102810 | 44.558 | 294 | 147 | 6 | 18 | 298 | 462 | 752 | 4.47e-71 | 234 |
MS.gene84585.t1 | MTR_2g049200 | 43.046 | 302 | 161 | 6 | 6 | 300 | 458 | 755 | 6.06e-71 | 233 |
MS.gene84585.t1 | MTR_2g042130 | 43.158 | 285 | 156 | 5 | 19 | 298 | 487 | 770 | 9.58e-71 | 233 |
MS.gene84585.t1 | MTR_1g078110 | 41.806 | 299 | 162 | 6 | 10 | 300 | 459 | 753 | 1.92e-69 | 229 |
MS.gene84585.t1 | MTR_4g125180 | 45.172 | 290 | 143 | 9 | 19 | 298 | 466 | 749 | 2.10e-69 | 229 |
MS.gene84585.t1 | MTR_4g073540 | 44.251 | 287 | 149 | 5 | 24 | 300 | 482 | 767 | 4.78e-69 | 228 |
MS.gene84585.t1 | MTR_8g024390 | 42.373 | 295 | 151 | 7 | 18 | 300 | 470 | 757 | 2.84e-67 | 224 |
MS.gene84585.t1 | MTR_8g027260 | 43.206 | 287 | 145 | 7 | 23 | 302 | 378 | 653 | 5.59e-67 | 221 |
MS.gene84585.t1 | MTR_1g102350 | 44.245 | 278 | 146 | 6 | 29 | 300 | 502 | 776 | 5.75e-67 | 223 |
MS.gene84585.t1 | MTR_1g006990 | 45.965 | 285 | 133 | 8 | 25 | 301 | 464 | 735 | 1.03e-66 | 222 |
MS.gene84585.t1 | MTR_8g022870 | 44.561 | 285 | 142 | 9 | 29 | 300 | 494 | 775 | 2.41e-66 | 221 |
MS.gene84585.t1 | MTR_4g053630 | 44.710 | 293 | 153 | 7 | 11 | 300 | 366 | 652 | 1.13e-65 | 218 |
MS.gene84585.t1 | MTR_4g053630 | 46.071 | 280 | 142 | 7 | 24 | 300 | 456 | 729 | 2.53e-65 | 218 |
MS.gene84585.t1 | MTR_8g005710 | 42.105 | 285 | 147 | 7 | 25 | 302 | 427 | 700 | 6.53e-65 | 216 |
MS.gene84585.t1 | MTR_7g075900 | 46.043 | 278 | 140 | 9 | 31 | 300 | 496 | 771 | 1.06e-64 | 217 |
MS.gene84585.t1 | MTR_1g007030 | 43.860 | 285 | 139 | 8 | 25 | 301 | 462 | 733 | 1.36e-64 | 216 |
MS.gene84585.t1 | MTR_1g048110 | 44.211 | 285 | 138 | 9 | 25 | 301 | 460 | 731 | 1.47e-64 | 216 |
MS.gene84585.t1 | MTR_8g021130 | 43.972 | 282 | 142 | 7 | 31 | 301 | 499 | 775 | 4.33e-64 | 215 |
MS.gene84585.t1 | MTR_8g024420 | 42.123 | 292 | 156 | 8 | 18 | 300 | 434 | 721 | 2.48e-63 | 213 |
MS.gene84585.t1 | MTR_1g018510 | 41.333 | 300 | 156 | 7 | 16 | 298 | 427 | 723 | 4.70e-63 | 212 |
MS.gene84585.t1 | MTR_7g034380 | 42.160 | 287 | 146 | 8 | 25 | 303 | 420 | 694 | 6.07e-63 | 211 |
MS.gene84585.t1 | MTR_3g114420 | 42.509 | 287 | 149 | 8 | 24 | 300 | 484 | 764 | 8.54e-63 | 212 |
MS.gene84585.t1 | MTR_2g042650 | 44.211 | 285 | 138 | 9 | 25 | 301 | 372 | 643 | 1.22e-62 | 209 |
MS.gene84585.t1 | MTR_3g104930 | 43.110 | 283 | 148 | 8 | 24 | 297 | 480 | 758 | 5.94e-62 | 209 |
MS.gene84585.t1 | MTR_7g118080 | 43.197 | 294 | 155 | 7 | 16 | 300 | 465 | 755 | 5.50e-61 | 207 |
MS.gene84585.t1 | MTR_2g018135 | 43.986 | 291 | 147 | 7 | 18 | 300 | 500 | 782 | 1.51e-60 | 206 |
MS.gene84585.t1 | MTR_8g083220 | 43.056 | 288 | 149 | 8 | 18 | 301 | 499 | 775 | 2.13e-60 | 205 |
MS.gene84585.t1 | MTR_4g053635 | 44.643 | 280 | 143 | 8 | 24 | 300 | 402 | 672 | 7.89e-60 | 202 |
MS.gene84585.t1 | MTR_8g042710 | 41.429 | 280 | 156 | 6 | 27 | 301 | 488 | 764 | 1.08e-59 | 203 |
MS.gene84585.t1 | MTR_8g042670 | 41.429 | 280 | 153 | 7 | 27 | 301 | 361 | 634 | 1.48e-59 | 201 |
MS.gene84585.t1 | MTR_2g018125 | 43.299 | 291 | 149 | 7 | 18 | 300 | 501 | 783 | 5.53e-59 | 201 |
MS.gene84585.t1 | MTR_3g464790 | 42.403 | 283 | 138 | 8 | 24 | 297 | 462 | 728 | 5.56e-59 | 201 |
MS.gene84585.t1 | MTR_8g006680 | 42.014 | 288 | 133 | 10 | 25 | 301 | 459 | 723 | 5.63e-59 | 201 |
MS.gene84585.t1 | MTR_8g005300 | 42.014 | 288 | 133 | 10 | 25 | 301 | 459 | 723 | 5.63e-59 | 201 |
MS.gene84585.t1 | MTR_8g005640 | 42.014 | 288 | 133 | 10 | 25 | 301 | 459 | 723 | 5.63e-59 | 201 |
MS.gene84585.t1 | MTR_4g102400 | 45.126 | 277 | 134 | 10 | 31 | 300 | 487 | 752 | 6.47e-59 | 201 |
MS.gene84585.t1 | MTR_8g042670 | 41.429 | 280 | 153 | 7 | 27 | 301 | 485 | 758 | 6.64e-59 | 201 |
MS.gene84585.t1 | MTR_6g055570 | 42.857 | 287 | 143 | 9 | 25 | 302 | 457 | 731 | 2.12e-58 | 199 |
MS.gene84585.t1 | MTR_7g079310 | 41.608 | 286 | 156 | 8 | 23 | 300 | 481 | 763 | 2.46e-58 | 199 |
MS.gene84585.t1 | MTR_5g011340 | 44.643 | 280 | 136 | 10 | 31 | 303 | 486 | 753 | 2.59e-58 | 199 |
MS.gene84585.t1 | MTR_7g079300 | 40.210 | 286 | 160 | 8 | 23 | 300 | 483 | 765 | 7.83e-58 | 198 |
MS.gene84585.t1 | MTR_1g079120 | 41.319 | 288 | 157 | 8 | 23 | 300 | 475 | 760 | 2.79e-57 | 197 |
MS.gene84585.t1 | MTR_5g011310 | 43.929 | 280 | 138 | 10 | 31 | 303 | 489 | 756 | 4.44e-57 | 196 |
MS.gene84585.t1 | MTR_5g011320 | 43.416 | 281 | 138 | 10 | 31 | 303 | 481 | 748 | 6.51e-57 | 195 |
MS.gene84585.t1 | MTR_7g104200 | 40.000 | 290 | 151 | 8 | 23 | 302 | 467 | 743 | 9.01e-57 | 195 |
MS.gene84585.t1 | MTR_8g033150 | 42.349 | 281 | 138 | 9 | 30 | 300 | 458 | 724 | 2.87e-56 | 193 |
MS.gene84585.t1 | MTR_8g033150 | 42.349 | 281 | 138 | 9 | 30 | 300 | 485 | 751 | 3.42e-56 | 194 |
MS.gene84585.t1 | MTR_5g011370 | 43.369 | 279 | 141 | 9 | 31 | 303 | 509 | 776 | 6.68e-56 | 193 |
MS.gene84585.t1 | MTR_5g011190 | 44.203 | 276 | 137 | 9 | 31 | 300 | 489 | 753 | 7.24e-56 | 192 |
MS.gene84585.t1 | MTR_7g098630 | 41.554 | 296 | 156 | 10 | 18 | 300 | 469 | 760 | 9.79e-56 | 193 |
MS.gene84585.t1 | MTR_5g011280 | 43.116 | 276 | 140 | 9 | 31 | 300 | 491 | 755 | 2.57e-55 | 191 |
MS.gene84585.t1 | MTR_8g024370 | 39.189 | 296 | 168 | 6 | 13 | 300 | 465 | 756 | 4.84e-55 | 191 |
MS.gene84585.t1 | MTR_6g055410 | 41.544 | 272 | 138 | 9 | 40 | 302 | 454 | 713 | 5.02e-55 | 190 |
MS.gene84585.t1 | MTR_8g079900 | 41.935 | 279 | 142 | 9 | 30 | 300 | 377 | 643 | 9.05e-55 | 188 |
MS.gene84585.t1 | MTR_7g075890 | 38.312 | 308 | 160 | 9 | 6 | 302 | 611 | 899 | 1.33e-54 | 190 |
MS.gene84585.t1 | MTR_8g079900 | 41.935 | 279 | 142 | 9 | 30 | 300 | 475 | 741 | 2.57e-54 | 188 |
MS.gene84585.t1 | MTR_2g044630 | 44.141 | 256 | 122 | 9 | 54 | 301 | 464 | 706 | 3.31e-53 | 185 |
MS.gene84585.t1 | MTR_3g010080 | 40.067 | 297 | 147 | 13 | 18 | 301 | 454 | 732 | 4.49e-52 | 182 |
MS.gene84585.t1 | MTR_5g011270 | 40.493 | 284 | 136 | 11 | 31 | 300 | 487 | 751 | 3.80e-51 | 180 |
MS.gene84585.t1 | MTR_5g011260 | 40.141 | 284 | 137 | 11 | 31 | 300 | 487 | 751 | 2.83e-50 | 177 |
MS.gene84585.t1 | MTR_6g075370 | 40.996 | 261 | 129 | 9 | 17 | 269 | 415 | 658 | 3.76e-49 | 173 |
MS.gene84585.t1 | MTR_2g042640 | 44.758 | 248 | 98 | 10 | 25 | 262 | 393 | 611 | 3.09e-48 | 170 |
MS.gene84585.t1 | MTR_4g127480 | 40.484 | 289 | 147 | 11 | 28 | 301 | 536 | 814 | 1.55e-47 | 170 |
MS.gene84585.t1 | MTR_3g452290 | 39.130 | 253 | 116 | 6 | 53 | 302 | 353 | 570 | 6.09e-44 | 158 |
MS.gene84585.t1 | MTR_3g451220 | 39.130 | 253 | 116 | 6 | 53 | 302 | 353 | 570 | 6.09e-44 | 158 |
MS.gene84585.t1 | MTR_3g114140 | 40.081 | 247 | 127 | 9 | 24 | 258 | 184 | 421 | 1.03e-41 | 149 |
MS.gene84585.t1 | MTR_2g037850 | 38.811 | 286 | 148 | 11 | 29 | 298 | 537 | 811 | 8.77e-41 | 151 |
MS.gene84585.t1 | MTR_2g070260 | 44.624 | 186 | 84 | 7 | 92 | 269 | 1 | 175 | 9.61e-39 | 136 |
MS.gene84585.t1 | MTR_8g089230 | 36.897 | 290 | 155 | 11 | 31 | 303 | 570 | 848 | 1.46e-36 | 139 |
MS.gene84585.t1 | MTR_4g132620 | 31.818 | 308 | 185 | 13 | 7 | 300 | 518 | 814 | 4.71e-33 | 129 |
MS.gene84585.t1 | MTR_4g126230 | 36.893 | 206 | 112 | 6 | 31 | 230 | 55 | 248 | 9.89e-33 | 121 |
MS.gene84585.t1 | MTR_2g046740 | 36.082 | 291 | 157 | 13 | 31 | 303 | 562 | 841 | 2.77e-32 | 126 |
MS.gene84585.t1 | MTR_5g044060 | 44.444 | 135 | 73 | 2 | 19 | 152 | 1 | 134 | 2.01e-28 | 108 |
MS.gene84585.t1 | MTR_4g071560 | 47.619 | 126 | 58 | 2 | 17 | 139 | 410 | 530 | 4.94e-28 | 113 |
MS.gene84585.t1 | MTR_4g053665 | 34.109 | 258 | 115 | 10 | 50 | 300 | 1 | 210 | 5.34e-27 | 105 |
MS.gene84585.t1 | MTR_3g114410 | 54.808 | 104 | 39 | 2 | 24 | 124 | 483 | 581 | 2.45e-25 | 106 |
MS.gene84585.t1 | MTR_8g042710 | 48.515 | 101 | 52 | 0 | 27 | 127 | 488 | 588 | 6.57e-24 | 102 |
MS.gene84585.t1 | MTR_8g027660 | 32.258 | 186 | 106 | 5 | 116 | 300 | 80 | 246 | 4.76e-22 | 93.2 |
MS.gene84585.t1 | MTR_5g081130 | 33.735 | 166 | 97 | 7 | 143 | 300 | 12 | 172 | 1.80e-20 | 87.8 |
MS.gene84585.t1 | MTR_7g079295 | 35.404 | 161 | 86 | 8 | 151 | 300 | 356 | 509 | 2.01e-15 | 76.6 |
MS.gene84585.t1 | MTR_5g011300 | 46.667 | 90 | 47 | 1 | 92 | 181 | 1 | 89 | 1.78e-14 | 68.6 |
MS.gene84585.t1 | MTR_3g005755 | 45.946 | 74 | 39 | 1 | 81 | 153 | 235 | 308 | 5.69e-13 | 68.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84585.t1 | AT2G04160 | 54.545 | 286 | 125 | 5 | 18 | 301 | 489 | 771 | 1.63e-94 | 296 |
MS.gene84585.t1 | AT5G59810 | 54.182 | 275 | 119 | 6 | 29 | 301 | 506 | 775 | 1.12e-92 | 291 |
MS.gene84585.t1 | AT5G67360 | 46.667 | 285 | 148 | 3 | 19 | 300 | 471 | 754 | 1.30e-78 | 254 |
MS.gene84585.t1 | AT2G05920 | 48.029 | 279 | 140 | 4 | 24 | 298 | 470 | 747 | 5.69e-78 | 252 |
MS.gene84585.t1 | AT5G45650 | 44.590 | 305 | 149 | 8 | 6 | 300 | 494 | 788 | 1.20e-70 | 233 |
MS.gene84585.t1 | AT5G45650 | 44.590 | 305 | 149 | 8 | 6 | 300 | 494 | 788 | 1.20e-70 | 233 |
MS.gene84585.t1 | AT4G26330 | 43.151 | 292 | 155 | 7 | 17 | 300 | 433 | 721 | 4.67e-67 | 223 |
MS.gene84585.t1 | AT4G26330 | 42.808 | 292 | 156 | 7 | 17 | 300 | 447 | 735 | 5.61e-67 | 223 |
MS.gene84585.t1 | AT5G51750 | 45.161 | 279 | 143 | 6 | 29 | 300 | 499 | 774 | 3.98e-66 | 221 |
MS.gene84585.t1 | AT1G20160 | 44.291 | 289 | 147 | 8 | 24 | 303 | 442 | 725 | 1.19e-64 | 216 |
MS.gene84585.t1 | AT1G20160 | 44.291 | 289 | 147 | 8 | 24 | 303 | 481 | 764 | 2.23e-64 | 216 |
MS.gene84585.t1 | AT3G14240 | 44.014 | 284 | 145 | 8 | 29 | 300 | 488 | 769 | 2.75e-64 | 216 |
MS.gene84585.t1 | AT1G32970 | 43.945 | 289 | 149 | 8 | 18 | 303 | 447 | 725 | 1.44e-62 | 211 |
MS.gene84585.t1 | AT4G21630 | 44.186 | 301 | 156 | 6 | 4 | 301 | 463 | 754 | 2.24e-62 | 210 |
MS.gene84585.t1 | AT4G34980 | 43.599 | 289 | 149 | 9 | 24 | 300 | 472 | 758 | 4.98e-62 | 209 |
MS.gene84585.t1 | AT3G14067 | 42.105 | 285 | 150 | 8 | 30 | 301 | 486 | 768 | 5.03e-62 | 210 |
MS.gene84585.t1 | AT4G21640 | 44.702 | 302 | 153 | 7 | 4 | 301 | 437 | 728 | 5.14e-62 | 209 |
MS.gene84585.t1 | AT5G59100 | 46.237 | 279 | 131 | 9 | 31 | 300 | 469 | 737 | 8.59e-62 | 209 |
MS.gene84585.t1 | AT4G10520 | 42.759 | 290 | 153 | 6 | 17 | 303 | 468 | 747 | 2.80e-61 | 207 |
MS.gene84585.t1 | AT5G58840 | 45.161 | 279 | 136 | 8 | 29 | 300 | 438 | 706 | 3.42e-61 | 206 |
MS.gene84585.t1 | AT4G00230 | 43.728 | 279 | 138 | 9 | 30 | 300 | 476 | 743 | 3.62e-60 | 204 |
MS.gene84585.t1 | AT5G59120 | 41.667 | 300 | 152 | 9 | 10 | 300 | 442 | 727 | 5.28e-60 | 204 |
MS.gene84585.t1 | AT4G10550 | 42.069 | 290 | 154 | 8 | 17 | 303 | 435 | 713 | 6.14e-60 | 203 |
MS.gene84585.t1 | AT4G10550 | 42.069 | 290 | 154 | 8 | 17 | 303 | 435 | 713 | 6.14e-60 | 203 |
MS.gene84585.t1 | AT4G21650 | 42.809 | 299 | 159 | 6 | 6 | 301 | 472 | 761 | 7.34e-60 | 204 |
MS.gene84585.t1 | AT5G11940 | 43.151 | 292 | 151 | 9 | 17 | 303 | 474 | 755 | 1.02e-59 | 203 |
MS.gene84585.t1 | AT4G10550 | 42.069 | 290 | 154 | 8 | 17 | 303 | 507 | 785 | 1.13e-59 | 204 |
MS.gene84585.t1 | AT4G10550 | 42.069 | 290 | 154 | 8 | 17 | 303 | 491 | 769 | 1.15e-59 | 203 |
MS.gene84585.t1 | AT1G66220 | 43.151 | 292 | 144 | 8 | 16 | 303 | 474 | 747 | 1.22e-59 | 203 |
MS.gene84585.t1 | AT5G58830 | 43.682 | 277 | 139 | 8 | 31 | 300 | 439 | 705 | 8.10e-59 | 200 |
MS.gene84585.t1 | AT3G46850 | 42.466 | 292 | 148 | 9 | 16 | 300 | 456 | 734 | 9.08e-59 | 200 |
MS.gene84585.t1 | AT5G59090 | 40.830 | 289 | 149 | 9 | 21 | 300 | 453 | 728 | 1.02e-58 | 200 |
MS.gene84585.t1 | AT5G59090 | 40.830 | 289 | 149 | 9 | 21 | 300 | 451 | 726 | 1.02e-58 | 200 |
MS.gene84585.t1 | AT5G59090 | 40.830 | 289 | 144 | 9 | 21 | 300 | 453 | 723 | 2.09e-58 | 199 |
MS.gene84585.t1 | AT1G01900 | 45.230 | 283 | 138 | 9 | 31 | 300 | 493 | 771 | 2.21e-58 | 200 |
MS.gene84585.t1 | AT5G58820 | 44.097 | 288 | 130 | 10 | 26 | 300 | 431 | 700 | 8.62e-58 | 197 |
MS.gene84585.t1 | AT4G10540 | 40.345 | 290 | 160 | 6 | 17 | 303 | 487 | 766 | 9.35e-58 | 198 |
MS.gene84585.t1 | AT5G59190 | 45.749 | 247 | 118 | 6 | 29 | 269 | 422 | 658 | 1.43e-57 | 196 |
MS.gene84585.t1 | AT3G46840 | 43.686 | 293 | 143 | 11 | 16 | 300 | 456 | 734 | 3.09e-57 | 196 |
MS.gene84585.t1 | AT4G10510 | 40.345 | 290 | 160 | 6 | 17 | 303 | 418 | 697 | 6.15e-57 | 195 |
MS.gene84585.t1 | AT4G10510 | 40.345 | 290 | 160 | 6 | 17 | 303 | 433 | 712 | 7.28e-57 | 195 |
MS.gene84585.t1 | AT4G10510 | 40.345 | 290 | 160 | 6 | 17 | 303 | 477 | 756 | 1.09e-56 | 195 |
MS.gene84585.t1 | AT4G10510 | 40.345 | 290 | 160 | 6 | 17 | 303 | 489 | 768 | 1.32e-56 | 195 |
MS.gene84585.t1 | AT1G32940 | 41.379 | 290 | 157 | 6 | 17 | 303 | 435 | 714 | 2.87e-56 | 193 |
MS.gene84585.t1 | AT1G32940 | 41.379 | 290 | 157 | 6 | 17 | 303 | 435 | 714 | 2.87e-56 | 193 |
MS.gene84585.t1 | AT5G45640 | 41.077 | 297 | 125 | 8 | 23 | 300 | 486 | 751 | 3.33e-56 | 194 |
MS.gene84585.t1 | AT1G32940 | 41.379 | 290 | 157 | 6 | 17 | 303 | 486 | 765 | 4.68e-56 | 193 |
MS.gene84585.t1 | AT5G59130 | 44.404 | 277 | 134 | 9 | 31 | 300 | 423 | 686 | 8.76e-56 | 192 |
MS.gene84585.t1 | AT5G59130 | 44.404 | 277 | 134 | 9 | 31 | 300 | 462 | 725 | 1.34e-55 | 192 |
MS.gene84585.t1 | AT5G59130 | 44.404 | 277 | 134 | 9 | 31 | 300 | 452 | 715 | 1.36e-55 | 192 |
MS.gene84585.t1 | AT1G32950 | 39.310 | 290 | 163 | 5 | 17 | 303 | 434 | 713 | 1.42e-55 | 191 |
MS.gene84585.t1 | AT5G59130 | 44.404 | 277 | 134 | 9 | 31 | 300 | 458 | 721 | 1.49e-55 | 191 |
MS.gene84585.t1 | AT1G32950 | 39.310 | 290 | 163 | 5 | 17 | 303 | 485 | 764 | 2.05e-55 | 192 |
MS.gene84585.t1 | AT5G03620 | 39.735 | 302 | 143 | 11 | 23 | 302 | 476 | 760 | 2.79e-55 | 191 |
MS.gene84585.t1 | AT1G32960 | 39.310 | 290 | 163 | 5 | 17 | 303 | 489 | 768 | 4.48e-55 | 191 |
MS.gene84585.t1 | AT1G04110 | 40.333 | 300 | 163 | 9 | 16 | 303 | 478 | 773 | 5.12e-55 | 191 |
MS.gene84585.t1 | AT1G66210 | 41.924 | 291 | 148 | 9 | 18 | 303 | 479 | 753 | 1.36e-54 | 189 |
MS.gene84585.t1 | AT4G21326 | 40.604 | 298 | 166 | 5 | 6 | 301 | 400 | 688 | 1.12e-53 | 186 |
MS.gene84585.t1 | AT1G20150 | 40.614 | 293 | 143 | 10 | 31 | 303 | 492 | 773 | 1.09e-52 | 184 |
MS.gene84585.t1 | AT4G21323 | 40.468 | 299 | 160 | 9 | 11 | 303 | 510 | 796 | 5.25e-52 | 182 |
MS.gene84585.t1 | AT4G15040 | 41.727 | 278 | 142 | 8 | 31 | 300 | 420 | 685 | 1.51e-50 | 177 |
MS.gene84585.t1 | AT4G15040 | 41.727 | 278 | 142 | 8 | 31 | 300 | 420 | 685 | 1.51e-50 | 177 |
MS.gene84585.t1 | AT4G10530 | 38.966 | 290 | 151 | 7 | 17 | 303 | 472 | 738 | 5.49e-50 | 176 |
MS.gene84585.t1 | AT1G32980 | 45.989 | 187 | 97 | 4 | 88 | 271 | 3 | 188 | 5.81e-44 | 149 |
MS.gene84585.t1 | AT4G30020 | 36.577 | 298 | 152 | 13 | 28 | 303 | 533 | 815 | 7.44e-43 | 157 |
MS.gene84585.t1 | AT4G30020 | 36.577 | 298 | 152 | 13 | 28 | 303 | 533 | 815 | 7.44e-43 | 157 |
MS.gene84585.t1 | AT4G30020 | 36.577 | 298 | 152 | 13 | 28 | 303 | 533 | 815 | 7.44e-43 | 157 |
MS.gene84585.t1 | AT4G30020 | 36.577 | 298 | 152 | 13 | 28 | 303 | 533 | 815 | 7.44e-43 | 157 |
MS.gene84585.t1 | AT2G19170 | 37.329 | 292 | 147 | 12 | 28 | 298 | 532 | 808 | 8.10e-42 | 154 |
MS.gene84585.t1 | AT2G19170 | 37.329 | 292 | 147 | 12 | 28 | 298 | 532 | 808 | 8.10e-42 | 154 |
MS.gene84585.t1 | AT5G67090 | 36.000 | 300 | 141 | 12 | 9 | 289 | 448 | 715 | 8.27e-42 | 154 |
MS.gene84585.t1 | AT2G39850 | 36.054 | 294 | 146 | 12 | 32 | 300 | 489 | 765 | 2.93e-40 | 149 |
MS.gene84585.t1 | AT1G62340 | 31.596 | 307 | 189 | 8 | 7 | 301 | 533 | 830 | 6.61e-37 | 140 |
MS.gene84585.t1 | AT4G20430 | 34.354 | 294 | 157 | 14 | 31 | 303 | 549 | 827 | 1.85e-30 | 121 |
MS.gene84585.t1 | AT4G20430 | 34.471 | 293 | 158 | 14 | 31 | 303 | 573 | 851 | 1.91e-30 | 121 |
MS.gene84585.t1 | AT4G20430 | 34.471 | 293 | 158 | 14 | 31 | 303 | 573 | 851 | 1.91e-30 | 121 |
MS.gene84585.t1 | AT5G44530 | 34.364 | 291 | 161 | 13 | 31 | 303 | 558 | 836 | 7.95e-30 | 119 |
MS.gene84585.t1 | AT1G30600 | 36.818 | 220 | 116 | 7 | 31 | 235 | 548 | 759 | 8.17e-29 | 116 |
MS.gene84585.t1 | AT5G58840 | 60.417 | 96 | 37 | 1 | 29 | 124 | 438 | 532 | 8.38e-28 | 113 |
MS.gene84585.t1 | AT5G03620 | 52.941 | 102 | 47 | 1 | 23 | 124 | 476 | 576 | 8.77e-28 | 113 |
MS.gene84585.t1 | AT4G00230 | 53.061 | 98 | 45 | 1 | 30 | 127 | 476 | 572 | 3.16e-27 | 111 |
MS.gene84585.t1 | AT5G44530 | 31.962 | 316 | 160 | 14 | 31 | 303 | 558 | 861 | 2.25e-26 | 109 |
MS.gene84585.t1 | AT5G59110 | 38.889 | 162 | 88 | 8 | 148 | 300 | 7 | 166 | 7.14e-23 | 93.2 |
MS.gene84585.t1 | AT1G32940 | 48.624 | 109 | 48 | 2 | 17 | 125 | 486 | 586 | 2.67e-19 | 88.6 |
Find 66 sgRNAs with CRISPR-Local
Find 88 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCTTGAAATTCAAGGAATT+TGG | 0.178851 | 7.3:-39575247 | None:intergenic |
ATAGCTGCTGGACTCCAATT+TGG | 0.219580 | 7.3:-39574620 | None:intergenic |
CCTGGACTTGTTTACGATCT+AGG | 0.256940 | 7.3:+39574977 | MS.gene84585:CDS |
TGTTTACGATCTAGGGATTA+AGG | 0.269838 | 7.3:+39574985 | MS.gene84585:CDS |
CCACGAAGGAAATACCAATT+TGG | 0.277770 | 7.3:+39575322 | MS.gene84585:CDS |
TCCATCGTAGTTCCCCAAAT+TGG | 0.281897 | 7.3:-39575336 | None:intergenic |
TCAAAACACTACATCCAAAT+TGG | 0.283601 | 7.3:+39574606 | MS.gene84585:CDS |
TCCTTGAATTTCAAGAAAAT+AGG | 0.302304 | 7.3:+39575253 | MS.gene84585:CDS |
CACGAAGGAAATACCAATTT+GGG | 0.314779 | 7.3:+39575323 | MS.gene84585:CDS |
ACAGCATTCAATCCAAGATT+TGG | 0.320748 | 7.3:-39575136 | None:intergenic |
TCAATCACATTACCAAATCT+TGG | 0.323046 | 7.3:+39575124 | MS.gene84585:CDS |
TTGAACTTCTTATGTGCATA+TGG | 0.331145 | 7.3:+39575013 | MS.gene84585:CDS |
AACATGACATTTACTTGTTC+AGG | 0.339929 | 7.3:+39575070 | MS.gene84585:CDS |
TCAATCACCTTGAGTATTGA+TGG | 0.346146 | 7.3:-39574346 | None:intergenic |
GGGAATCAGGCACTAAAATA+AGG | 0.354809 | 7.3:+39574239 | MS.gene84585:intron |
CCTCATGTTGTTGGCACTGC+TGG | 0.359066 | 7.3:+39574578 | MS.gene84585:CDS |
GTTCCTTGCAATACATTGTA+TGG | 0.359612 | 7.3:-39574542 | None:intergenic |
CATTTGCGCCGAACAGTAAC+GGG | 0.361992 | 7.3:-39575385 | None:intergenic |
ATTGATGGTTGAACTTGATT+TGG | 0.377113 | 7.3:-39574331 | None:intergenic |
GATGAGAATGAAGCCATAAC+TGG | 0.405810 | 7.3:-39574301 | None:intergenic |
AATCCATTTGCATATGGTTC+AGG | 0.406844 | 7.3:+39574926 | MS.gene84585:CDS |
CCAAATTGGTATTTCCTTCG+TGG | 0.412320 | 7.3:-39575322 | None:intergenic |
TTATCAAATGCATCACGTAT+TGG | 0.414236 | 7.3:-39574893 | None:intergenic |
TAATGAGTCCCGTTACTGTT+CGG | 0.426793 | 7.3:+39575377 | MS.gene84585:CDS |
CTGGCAAATCCATTTGCATA+TGG | 0.429546 | 7.3:+39574920 | MS.gene84585:CDS |
CTGGACTTGTTTACGATCTA+GGG | 0.429849 | 7.3:+39574978 | MS.gene84585:CDS |
TTGTTGCTTGCACAATAACT+TGG | 0.441608 | 7.3:-39575291 | None:intergenic |
ATGTCATGCCCTCATGTTGT+TGG | 0.455433 | 7.3:+39574569 | MS.gene84585:CDS |
CCAGGATCTATTGCACTGTT+GGG | 0.460305 | 7.3:-39574959 | None:intergenic |
TCCAGGATCTATTGCACTGT+TGG | 0.462621 | 7.3:-39574960 | None:intergenic |
TAAGTGCTGAAATGAGTTGT+TGG | 0.464449 | 7.3:-39575042 | None:intergenic |
GAGTCCAGCAGCTATTAAAT+CGG | 0.488824 | 7.3:+39574628 | MS.gene84585:CDS |
AGATTTGGTAATGTGATTGA+AGG | 0.490106 | 7.3:-39575121 | None:intergenic |
TCATTTGCGCCGAACAGTAA+CGG | 0.490606 | 7.3:-39575386 | None:intergenic |
CAGCCTGATGTTACTGCACC+CGG | 0.498190 | 7.3:+39574446 | MS.gene84585:intron |
TTTGCAAAAGCACAATTACC+TGG | 0.501282 | 7.3:+39575205 | MS.gene84585:CDS |
ACTCGCACTGTAACCAATGT+TGG | 0.505759 | 7.3:+39575166 | MS.gene84585:CDS |
AAGAAAGCCAGCTCCAGTTA+TGG | 0.508920 | 7.3:+39574288 | MS.gene84585:CDS |
CTCGCACTGTAACCAATGTT+GGG | 0.508999 | 7.3:+39575167 | MS.gene84585:CDS |
GGGGAACTACGATGGACAAA+TGG | 0.512449 | 7.3:+39575343 | MS.gene84585:CDS |
CCCAACAGTGCAATAGATCC+TGG | 0.515467 | 7.3:+39574959 | MS.gene84585:CDS |
AATGAAGCCATAACTGGAGC+TGG | 0.521705 | 7.3:-39574295 | None:intergenic |
TGCACTTGCGAACAATGAAT+AGG | 0.526618 | 7.3:-39574486 | None:intergenic |
CCTAGATCGTAAACAAGTCC+AGG | 0.528932 | 7.3:-39574977 | None:intergenic |
ATAGCCGATTTAATAGCTGC+TGG | 0.534311 | 7.3:-39574632 | None:intergenic |
TGGCCTGAACCATATGCAAA+TGG | 0.538122 | 7.3:-39574929 | None:intergenic |
ACACCGGGTGCAGTAACATC+AGG | 0.543083 | 7.3:-39574449 | None:intergenic |
TTTCCATACAATGTATTGCA+AGG | 0.546445 | 7.3:+39574539 | MS.gene84585:CDS |
ACCAATTTGGGGAACTACGA+TGG | 0.552524 | 7.3:+39575335 | MS.gene84585:CDS |
ATGAAACCTCATGCATTGAA+AGG | 0.561634 | 7.3:+39574066 | MS.gene84585:CDS |
TGTACTTGGTGGCCCAACAT+TGG | 0.561671 | 7.3:-39575179 | None:intergenic |
TTGCACTGTTGGGTTGAATG+TGG | 0.565154 | 7.3:-39574949 | None:intergenic |
ATGGCTTCATTCTCATCTAG+AGG | 0.572550 | 7.3:+39574307 | MS.gene84585:CDS |
TTTGCAAAATATGTACTTGG+TGG | 0.575276 | 7.3:-39575190 | None:intergenic |
CCAGCAGTGCCAACAACATG+AGG | 0.578451 | 7.3:-39574578 | None:intergenic |
GATTTGGTAATGTGATTGAA+GGG | 0.580904 | 7.3:-39575120 | None:intergenic |
GAAGTTCCTTTCAATGCATG+AGG | 0.581902 | 7.3:-39574072 | None:intergenic |
AAATCGGCTATCATGACCAC+TGG | 0.587876 | 7.3:+39574644 | MS.gene84585:CDS |
TGATGCATTTGATAAAACAC+TGG | 0.608301 | 7.3:+39574901 | MS.gene84585:CDS |
AGTTCAACCATCAATACTCA+AGG | 0.610490 | 7.3:+39574339 | MS.gene84585:CDS |
GGCAGCAAGTATGTTCACAC+CGG | 0.611362 | 7.3:-39574465 | None:intergenic |
GCAGCAAGTATGTTCACACC+GGG | 0.652843 | 7.3:-39574464 | None:intergenic |
CAGCAGTGCCAACAACATGA+GGG | 0.654733 | 7.3:-39574577 | None:intergenic |
TTAATAACAGACATTCGTCG+AGG | 0.682771 | 7.3:+39574515 | MS.gene84585:CDS |
ACGAAGGAAATACCAATTTG+GGG | 0.707166 | 7.3:+39575324 | MS.gene84585:CDS |
CAACAAGTGTGACTCCACGA+AGG | 0.723694 | 7.3:+39575308 | MS.gene84585:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTATTAATTATATATACCTT+TGG | + | chr7.3:39574102-39574121 | MS.gene84585:intron | 10.0% |
!! | AAATAACATGTTACAAATAT+AGG | + | chr7.3:39574183-39574202 | MS.gene84585:intron | 15.0% |
!! | AATAACATGTTACAAATATA+GGG | + | chr7.3:39574184-39574203 | MS.gene84585:intron | 15.0% |
!!! | ATCATATATTTTTATTTCGT+AGG | + | chr7.3:39574218-39574237 | MS.gene84585:intron | 15.0% |
!!! | TCATATATTTTTATTTCGTA+GGG | + | chr7.3:39574219-39574238 | MS.gene84585:intron | 15.0% |
!! | GATTAATGATATGATAAAAG+TGG | + | chr7.3:39574795-39574814 | MS.gene84585:intron | 20.0% |
!! | TAATACTATAATTTCACCAA+AGG | - | chr7.3:39574121-39574140 | None:intergenic | 20.0% |
! | ATGATTTATGATTGTATGCA+TGG | - | chr7.3:39574718-39574737 | None:intergenic | 25.0% |
! | TCCTTGAATTTCAAGAAAAT+AGG | + | chr7.3:39575253-39575272 | MS.gene84585:CDS | 25.0% |
! | TTCTTGAAATTCAAGGAATT+TGG | - | chr7.3:39575250-39575269 | None:intergenic | 25.0% |
!! | ACAACAACAATTTTATATCC+AGG | - | chr7.3:39575226-39575245 | None:intergenic | 25.0% |
!! | ACCTATTTTCTTGAAATTCA+AGG | - | chr7.3:39575257-39575276 | None:intergenic | 25.0% |
!! | TGTTACTTATCCAAATATGT+TGG | + | chr7.3:39574837-39574856 | MS.gene84585:intron | 25.0% |
!!! | AGTTTGTGTTGATTTTTCAA+TGG | + | chr7.3:39574401-39574420 | MS.gene84585:intron | 25.0% |
!!! | GTTTGTGTTGATTTTTCAAT+GGG | + | chr7.3:39574402-39574421 | MS.gene84585:intron | 25.0% |
!!! | TTGAAAGTTTGTTACAACAA+GGG | - | chr7.3:39574148-39574167 | None:intergenic | 25.0% |
!!! | TTTGAAAGTTTGTTACAACA+AGG | - | chr7.3:39574149-39574168 | None:intergenic | 25.0% |
AACATGACATTTACTTGTTC+AGG | + | chr7.3:39575070-39575089 | MS.gene84585:CDS | 30.0% | |
TCAAAACACTACATCCAAAT+TGG | + | chr7.3:39574606-39574625 | MS.gene84585:CDS | 30.0% | |
TCAATCACATTACCAAATCT+TGG | + | chr7.3:39575124-39575143 | MS.gene84585:CDS | 30.0% | |
TGATGCATTTGATAAAACAC+TGG | + | chr7.3:39574901-39574920 | MS.gene84585:CDS | 30.0% | |
TTATCAAATGCATCACGTAT+TGG | - | chr7.3:39574896-39574915 | None:intergenic | 30.0% | |
TTGAACTTCTTATGTGCATA+TGG | + | chr7.3:39575013-39575032 | MS.gene84585:CDS | 30.0% | |
TTTCCATACAATGTATTGCA+AGG | + | chr7.3:39574539-39574558 | MS.gene84585:CDS | 30.0% | |
TTTGCAAAATATGTACTTGG+TGG | - | chr7.3:39575193-39575212 | None:intergenic | 30.0% | |
! | ATTGATGGTTGAACTTGATT+TGG | - | chr7.3:39574334-39574353 | None:intergenic | 30.0% |
! | GCTTTTGCAAAATATGTACT+TGG | - | chr7.3:39575196-39575215 | None:intergenic | 30.0% |
!! | AGATTTGGTAATGTGATTGA+AGG | - | chr7.3:39575124-39575143 | None:intergenic | 30.0% |
!! | GATTTGGTAATGTGATTGAA+GGG | - | chr7.3:39575123-39575142 | None:intergenic | 30.0% |
!! | TTTTTATTTCGTAGGGAATC+AGG | + | chr7.3:39574226-39574245 | MS.gene84585:intron | 30.0% |
!!! | TGTTGATTTTTCAATGGGAT+TGG | + | chr7.3:39574407-39574426 | MS.gene84585:intron | 30.0% |
AATCCATTTGCATATGGTTC+AGG | + | chr7.3:39574926-39574945 | MS.gene84585:CDS | 35.0% | |
ACAGCATTCAATCCAAGATT+TGG | - | chr7.3:39575139-39575158 | None:intergenic | 35.0% | |
ACGAAGGAAATACCAATTTG+GGG | + | chr7.3:39575324-39575343 | MS.gene84585:CDS | 35.0% | |
AGTTCAACCATCAATACTCA+AGG | + | chr7.3:39574339-39574358 | MS.gene84585:CDS | 35.0% | |
ATGAAACCTCATGCATTGAA+AGG | + | chr7.3:39574066-39574085 | MS.gene84585:CDS | 35.0% | |
CACGAAGGAAATACCAATTT+GGG | + | chr7.3:39575323-39575342 | MS.gene84585:CDS | 35.0% | |
GTTCCTTGCAATACATTGTA+TGG | - | chr7.3:39574545-39574564 | None:intergenic | 35.0% | |
TGTTTACGATCTAGGGATTA+AGG | + | chr7.3:39574985-39575004 | MS.gene84585:CDS | 35.0% | |
TTAATAACAGACATTCGTCG+AGG | + | chr7.3:39574515-39574534 | MS.gene84585:CDS | 35.0% | |
! | TTGTTGCTTGCACAATAACT+TGG | - | chr7.3:39575294-39575313 | None:intergenic | 35.0% |
! | TTTGCAAAAGCACAATTACC+TGG | + | chr7.3:39575205-39575224 | MS.gene84585:CDS | 35.0% |
!! | TAAGTGCTGAAATGAGTTGT+TGG | - | chr7.3:39575045-39575064 | None:intergenic | 35.0% |
!! | TCAATCACCTTGAGTATTGA+TGG | - | chr7.3:39574349-39574368 | None:intergenic | 35.0% |
ACCTGACACACACTATATCT+AGG | + | chr7.3:39574680-39574699 | MS.gene84585:intron | 40.0% | |
ATGGCTTCATTCTCATCTAG+AGG | + | chr7.3:39574307-39574326 | MS.gene84585:CDS | 40.0% | |
CCAAATTGGTATTTCCTTCG+TGG | - | chr7.3:39575325-39575344 | None:intergenic | 40.0% | |
CCACGAAGGAAATACCAATT+TGG | + | chr7.3:39575322-39575341 | MS.gene84585:CDS | 40.0% | |
CTGGCAAATCCATTTGCATA+TGG | + | chr7.3:39574920-39574939 | MS.gene84585:CDS | 40.0% | |
GAAGTTCCTTTCAATGCATG+AGG | - | chr7.3:39574075-39574094 | None:intergenic | 40.0% | |
GAGTCCAGCAGCTATTAAAT+CGG | + | chr7.3:39574628-39574647 | MS.gene84585:CDS | 40.0% | |
GATGAGAATGAAGCCATAAC+TGG | - | chr7.3:39574304-39574323 | None:intergenic | 40.0% | |
GGGAATCAGGCACTAAAATA+AGG | + | chr7.3:39574239-39574258 | MS.gene84585:intron | 40.0% | |
GGTGAGAGAAAATATACCAG+TGG | - | chr7.3:39574663-39574682 | None:intergenic | 40.0% | |
TAATGAGTCCCGTTACTGTT+CGG | + | chr7.3:39575377-39575396 | MS.gene84585:CDS | 40.0% | |
TCCTAGATATAGTGTGTGTC+AGG | - | chr7.3:39574684-39574703 | None:intergenic | 40.0% | |
TGCACTTGCGAACAATGAAT+AGG | - | chr7.3:39574489-39574508 | None:intergenic | 40.0% | |
TTGCTGCAAGCCAACATATT+TGG | - | chr7.3:39574850-39574869 | None:intergenic | 40.0% | |
! | ATAGCCGATTTAATAGCTGC+TGG | - | chr7.3:39574635-39574654 | None:intergenic | 40.0% |
! | CTGGACTTGTTTACGATCTA+GGG | + | chr7.3:39574978-39574997 | MS.gene84585:CDS | 40.0% |
AAATCGGCTATCATGACCAC+TGG | + | chr7.3:39574644-39574663 | MS.gene84585:CDS | 45.0% | |
AAGAAAGCCAGCTCCAGTTA+TGG | + | chr7.3:39574288-39574307 | MS.gene84585:CDS | 45.0% | |
AATGAAGCCATAACTGGAGC+TGG | - | chr7.3:39574298-39574317 | None:intergenic | 45.0% | |
ACCAATTTGGGGAACTACGA+TGG | + | chr7.3:39575335-39575354 | MS.gene84585:CDS | 45.0% | |
ACTCGCACTGTAACCAATGT+TGG | + | chr7.3:39575166-39575185 | MS.gene84585:CDS | 45.0% | |
ATAGCTGCTGGACTCCAATT+TGG | - | chr7.3:39574623-39574642 | None:intergenic | 45.0% | |
ATGTCATGCCCTCATGTTGT+TGG | + | chr7.3:39574569-39574588 | MS.gene84585:CDS | 45.0% | |
CCAGGATCTATTGCACTGTT+GGG | - | chr7.3:39574962-39574981 | None:intergenic | 45.0% | |
CCTAGATCGTAAACAAGTCC+AGG | - | chr7.3:39574980-39574999 | None:intergenic | 45.0% | |
CTCGCACTGTAACCAATGTT+GGG | + | chr7.3:39575167-39575186 | MS.gene84585:CDS | 45.0% | |
TCATTTGCGCCGAACAGTAA+CGG | - | chr7.3:39575389-39575408 | None:intergenic | 45.0% | |
TCCAGGATCTATTGCACTGT+TGG | - | chr7.3:39574963-39574982 | None:intergenic | 45.0% | |
TCCATCGTAGTTCCCCAAAT+TGG | - | chr7.3:39575339-39575358 | None:intergenic | 45.0% | |
TGGCCTGAACCATATGCAAA+TGG | - | chr7.3:39574932-39574951 | None:intergenic | 45.0% | |
! | CCTGGACTTGTTTACGATCT+AGG | + | chr7.3:39574977-39574996 | MS.gene84585:CDS | 45.0% |
!! | TTGCACTGTTGGGTTGAATG+TGG | - | chr7.3:39574952-39574971 | None:intergenic | 45.0% |
CAACAAGTGTGACTCCACGA+AGG | + | chr7.3:39575308-39575327 | MS.gene84585:CDS | 50.0% | |
CAGCAGTGCCAACAACATGA+GGG | - | chr7.3:39574580-39574599 | None:intergenic | 50.0% | |
CATTTGCGCCGAACAGTAAC+GGG | - | chr7.3:39575388-39575407 | None:intergenic | 50.0% | |
CCCAACAGTGCAATAGATCC+TGG | + | chr7.3:39574959-39574978 | MS.gene84585:CDS | 50.0% | |
GCAGCAAGTATGTTCACACC+GGG | - | chr7.3:39574467-39574486 | None:intergenic | 50.0% | |
GGCAGCAAGTATGTTCACAC+CGG | - | chr7.3:39574468-39574487 | None:intergenic | 50.0% | |
GGGGAACTACGATGGACAAA+TGG | + | chr7.3:39575343-39575362 | MS.gene84585:CDS | 50.0% | |
! | TGTACTTGGTGGCCCAACAT+TGG | - | chr7.3:39575182-39575201 | None:intergenic | 50.0% |
ACACCGGGTGCAGTAACATC+AGG | - | chr7.3:39574452-39574471 | None:intergenic | 55.0% | |
CAGCCTGATGTTACTGCACC+CGG | + | chr7.3:39574446-39574465 | MS.gene84585:intron | 55.0% | |
CCAGCAGTGCCAACAACATG+AGG | - | chr7.3:39574581-39574600 | None:intergenic | 55.0% | |
CCTCATGTTGTTGGCACTGC+TGG | + | chr7.3:39574578-39574597 | MS.gene84585:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.3 | gene | 39574066 | 39575408 | 39574066 | ID=MS.gene84585 |
chr7.3 | mRNA | 39574066 | 39575408 | 39574066 | ID=MS.gene84585.t1;Parent=MS.gene84585 |
chr7.3 | exon | 39574066 | 39574097 | 39574066 | ID=MS.gene84585.t1.exon1;Parent=MS.gene84585.t1 |
chr7.3 | CDS | 39574066 | 39574097 | 39574066 | ID=cds.MS.gene84585.t1;Parent=MS.gene84585.t1 |
chr7.3 | exon | 39574240 | 39574360 | 39574240 | ID=MS.gene84585.t1.exon2;Parent=MS.gene84585.t1 |
chr7.3 | CDS | 39574240 | 39574360 | 39574240 | ID=cds.MS.gene84585.t1;Parent=MS.gene84585.t1 |
chr7.3 | exon | 39574449 | 39574665 | 39574449 | ID=MS.gene84585.t1.exon3;Parent=MS.gene84585.t1 |
chr7.3 | CDS | 39574449 | 39574665 | 39574449 | ID=cds.MS.gene84585.t1;Parent=MS.gene84585.t1 |
chr7.3 | exon | 39574867 | 39575408 | 39574867 | ID=MS.gene84585.t1.exon4;Parent=MS.gene84585.t1 |
chr7.3 | CDS | 39574867 | 39575408 | 39574867 | ID=cds.MS.gene84585.t1;Parent=MS.gene84585.t1 |
Gene Sequence |
Protein sequence |