AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene85494


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene85494.t1 MTR_3g018930 73.561 643 168 2 155 795 513 1155 0.0 925
MS.gene85494.t1 MTR_3g018930 89.744 156 16 0 1 156 1 156 6.83e-80 279
MS.gene85494.t1 MTR_3g018980 72.613 639 170 1 156 794 513 1146 0.0 920
MS.gene85494.t1 MTR_3g018980 87.013 154 20 0 3 156 1 154 9.22e-77 270
MS.gene85494.t1 MTR_3g015260 73.125 640 133 2 156 795 514 1114 0.0 909
MS.gene85494.t1 MTR_3g015260 84.615 156 22 1 1 156 1 154 3.50e-66 239
MS.gene85494.t1 MTR_3g015260 79.879 497 95 1 156 652 514 1005 0.0 794
MS.gene85494.t1 MTR_3g015260 84.615 156 22 1 1 156 1 154 1.36e-66 239
MS.gene85494.t1 MTR_3g019040 62.384 646 226 4 156 793 513 1149 0.0 759
MS.gene85494.t1 MTR_3g019040 70.556 180 53 0 3 182 1 180 3.16e-67 242
MS.gene85494.t1 MTR_3g027420 58.165 741 264 14 77 793 420 1138 0.0 748
MS.gene85494.t1 MTR_3g027420 51.299 154 59 3 3 156 1 138 1.77e-30 129
MS.gene85494.t1 MTR_3g022400 61.017 649 239 6 156 793 493 1138 0.0 748
MS.gene85494.t1 MTR_3g022400 49.315 146 58 4 3 147 1 131 2.68e-27 119
MS.gene85494.t1 MTR_3g022570 60.555 649 242 6 156 793 534 1179 0.0 744
MS.gene85494.t1 MTR_3g022570 42.958 142 63 5 3 142 1 126 6.31e-16 83.2
MS.gene85494.t1 MTR_3g021100 61.017 649 239 6 156 793 504 1149 0.0 740
MS.gene85494.t1 MTR_3g021100 49.032 155 62 4 3 156 1 139 4.13e-29 125
MS.gene85494.t1 MTR_3g022940 61.325 649 237 6 156 793 496 1141 0.0 738
MS.gene85494.t1 MTR_3g022940 49.342 152 57 5 6 156 1 133 4.92e-28 122
MS.gene85494.t1 MTR_3g022870 61.381 637 234 5 167 793 507 1141 0.0 733
MS.gene85494.t1 MTR_3g022870 40.714 140 64 2 9 148 8 128 8.72e-18 89.0
MS.gene85494.t1 MTR_3g022920 60.863 649 240 6 156 793 489 1134 0.0 728
MS.gene85494.t1 MTR_3g022920 42.484 153 62 2 3 155 1 127 2.11e-22 103
MS.gene85494.t1 MTR_3g021380 59.414 648 251 5 156 793 486 1131 0.0 722
MS.gene85494.t1 MTR_3g021380 45.390 141 63 2 8 148 10 136 3.75e-23 106
MS.gene85494.t1 MTR_3g021340 59.938 649 238 7 156 793 498 1135 0.0 719
MS.gene85494.t1 MTR_3g021340 46.099 141 62 2 6 146 5 131 5.96e-24 108
MS.gene85494.t1 MTR_3g022400 58.333 648 230 6 156 793 493 1110 0.0 701
MS.gene85494.t1 MTR_3g022400 49.315 146 58 4 3 147 1 131 2.62e-27 119
MS.gene85494.t1 MTR_3g021400 58.923 650 252 7 156 793 488 1134 0.0 701
MS.gene85494.t1 MTR_3g021400 42.553 141 67 2 10 150 2 128 5.65e-20 96.3
MS.gene85494.t1 MTR_3g021170 58.114 647 259 6 156 793 499 1142 0.0 691
MS.gene85494.t1 MTR_3g021170 44.667 150 69 2 6 155 5 140 6.31e-27 118
MS.gene85494.t1 MTR_3g027250 58.243 649 254 8 156 793 497 1139 0.0 691
MS.gene85494.t1 MTR_3g027250 45.556 180 83 2 3 182 1 165 3.81e-34 141
MS.gene85494.t1 MTR_3g019000 58.951 648 250 7 156 793 509 1150 0.0 678
MS.gene85494.t1 MTR_3g019000 60.390 154 51 1 3 156 1 144 3.67e-44 172
MS.gene85494.t1 MTR_3g022870 57.547 636 224 5 167 793 507 1105 0.0 675
MS.gene85494.t1 MTR_3g022870 40.714 140 64 2 9 148 8 128 8.59e-18 89.0
MS.gene85494.t1 MTR_3g023030 58.075 644 248 10 166 795 489 1124 0.0 672
MS.gene85494.t1 MTR_3g023030 57.419 155 62 3 3 154 1 154 4.75e-35 144
MS.gene85494.t1 MTR_3g023030 58.075 644 248 10 166 795 523 1158 0.0 672
MS.gene85494.t1 MTR_3g023030 57.419 155 62 3 3 154 1 154 5.78e-35 144
MS.gene85494.t1 MTR_3g024460 56.923 650 261 7 156 794 116 757 0.0 663
MS.gene85494.t1 MTR_7g021000 51.793 753 281 14 77 794 422 1127 0.0 656
MS.gene85494.t1 MTR_7g021000 50.968 155 60 3 3 156 1 140 3.17e-33 138
MS.gene85494.t1 MTR_3g025360 59.560 591 225 6 156 735 525 1112 0.0 639
MS.gene85494.t1 MTR_3g025360 41.627 209 99 6 3 209 1 188 2.15e-29 126
MS.gene85494.t1 MTR_3g027200 56.240 649 260 10 156 791 517 1154 0.0 633
MS.gene85494.t1 MTR_3g027200 57.516 153 63 2 3 154 1 152 9.73e-42 165
MS.gene85494.t1 MTR_3g018980 72.893 439 114 1 156 594 513 946 0.0 632
MS.gene85494.t1 MTR_3g018980 87.013 154 20 0 3 156 1 154 8.87e-78 270
MS.gene85494.t1 MTR_3g022060 54.545 649 259 11 156 793 418 1041 0.0 622
MS.gene85494.t1 MTR_3g022060 63.235 68 25 0 81 148 14 81 1.58e-17 88.2
MS.gene85494.t1 MTR_3g022130 55.863 614 245 9 156 756 491 1091 0.0 588
MS.gene85494.t1 MTR_3g022130 51.974 152 47 2 3 154 1 126 2.13e-33 139
MS.gene85494.t1 MTR_3g027470 51.159 647 238 11 156 794 422 998 0.0 577
MS.gene85494.t1 MTR_3g035810 58.403 476 185 5 156 621 480 952 4.05e-168 511
MS.gene85494.t1 MTR_3g035810 46.528 144 61 3 3 145 1 129 1.58e-23 107
MS.gene85494.t1 MTR_3g018970 48.571 560 184 9 242 793 52 515 3.01e-141 427
MS.gene85494.t1 MTR_3g022790 45.556 630 263 20 156 772 506 1068 1.67e-133 429
MS.gene85494.t1 MTR_3g022790 53.274 336 149 4 427 760 1006 1335 2.28e-91 313
MS.gene85494.t1 MTR_3g022790 52.597 154 64 2 3 156 1 145 2.56e-35 145
MS.gene85494.t1 MTR_3g022790 30.827 399 198 20 427 770 870 1245 3.77e-20 96.7
MS.gene85494.t1 MTR_3g018930 75.618 283 68 1 155 436 513 795 4.08e-133 415
MS.gene85494.t1 MTR_3g018930 89.744 156 16 0 1 156 1 156 8.71e-83 281
MS.gene85494.t1 MTR_3g021330 42.733 688 248 18 6 669 5 570 5.29e-129 398
MS.gene85494.t1 MTR_3g021330 49.765 213 84 3 596 793 391 595 3.92e-50 186
MS.gene85494.t1 MTR_3g022590 47.741 509 183 10 282 785 13 443 1.34e-127 389
MS.gene85494.t1 MTR_0425s0020 41.529 667 286 24 156 770 513 1127 8.90e-119 388
MS.gene85494.t1 MTR_0425s0020 54.987 371 157 5 427 793 886 1250 7.33e-106 353
MS.gene85494.t1 MTR_0425s0020 56.863 153 64 2 3 154 1 152 2.08e-40 161
MS.gene85494.t1 MTR_3g022600 41.604 661 303 24 156 770 513 1136 3.59e-114 375
MS.gene85494.t1 MTR_3g022600 54.377 377 154 6 427 793 892 1260 3.33e-102 343
MS.gene85494.t1 MTR_3g022600 57.516 153 63 2 3 154 1 152 2.35e-40 161
MS.gene85494.t1 MTR_7g021000 49.443 449 174 10 77 493 422 849 1.36e-113 365
MS.gene85494.t1 MTR_7g021000 50.968 155 60 3 3 156 1 140 2.58e-33 138
MS.gene85494.t1 MTR_3g022740 46.653 478 167 10 156 575 230 677 2.18e-113 361
MS.gene85494.t1 MTR_8g038590 36.842 741 365 20 149 795 509 1240 9.36e-113 372
MS.gene85494.t1 MTR_8g038590 45.161 155 81 1 5 155 4 158 4.51e-30 128
MS.gene85494.t1 MTR_3g022300 41.104 652 307 21 156 770 513 1124 3.37e-112 369
MS.gene85494.t1 MTR_3g022300 47.154 369 159 5 427 793 883 1217 1.07e-79 279
MS.gene85494.t1 MTR_3g022300 57.516 153 63 2 3 154 1 152 3.74e-41 163
MS.gene85494.t1 MTR_3g022230 40.148 675 312 24 156 772 518 1158 1.27e-106 358
MS.gene85494.t1 MTR_3g022230 52.432 370 169 5 427 793 1231 1596 1.73e-95 327
MS.gene85494.t1 MTR_3g022230 48.325 209 99 3 3 210 1 201 1.05e-42 168
MS.gene85494.t1 MTR_3g022230 31.139 395 203 17 427 770 1096 1472 1.51e-16 85.1
MS.gene85494.t1 MTR_8g038570 35.829 748 364 18 144 793 510 1239 1.95e-101 340
MS.gene85494.t1 MTR_8g038570 42.857 154 84 1 5 154 4 157 3.30e-27 119
MS.gene85494.t1 MTR_0137s0070 38.669 631 322 16 221 793 1 624 2.25e-97 316
MS.gene85494.t1 MTR_0137s0070 37.087 666 319 16 221 793 1 659 2.97e-97 317
MS.gene85494.t1 MTR_2g038930 35.150 734 368 19 157 793 350 1072 7.33e-96 322
MS.gene85494.t1 MTR_3g014080 37.271 711 359 20 156 793 510 1206 1.43e-95 323
MS.gene85494.t1 MTR_3g014080 40.506 158 87 2 6 156 3 160 4.01e-19 93.2
MS.gene85494.t1 MTR_2g038900 35.286 734 367 19 157 793 513 1235 2.44e-95 323
MS.gene85494.t1 MTR_2g038900 33.775 151 84 3 5 147 4 146 5.66e-11 67.0
MS.gene85494.t1 MTR_3g014080 36.032 741 362 19 156 793 510 1241 2.49e-95 323
MS.gene85494.t1 MTR_3g014080 40.506 158 87 2 6 156 3 160 3.70e-19 93.6
MS.gene85494.t1 MTR_2g038760 34.647 736 369 18 157 793 524 1246 1.13e-94 322
MS.gene85494.t1 MTR_2g038760 35.762 151 81 3 5 147 15 157 8.59e-13 72.8
MS.gene85494.t1 MTR_3g033860 35.318 739 364 22 163 795 518 1248 4.77e-94 320
MS.gene85494.t1 MTR_3g033860 36.913 149 85 2 4 145 3 149 2.19e-17 87.8
MS.gene85494.t1 MTR_3g035940 34.688 738 360 23 163 793 517 1239 6.16e-94 320
MS.gene85494.t1 MTR_3g035940 36.158 177 95 5 4 162 3 179 1.45e-18 91.7
MS.gene85494.t1 MTR_3g033240 34.250 727 362 17 163 793 520 1226 3.46e-93 317
MS.gene85494.t1 MTR_3g033240 35.227 176 96 3 4 161 3 178 6.31e-22 102
MS.gene85494.t1 MTR_0002s0110 34.459 740 359 23 163 793 517 1239 4.40e-92 314
MS.gene85494.t1 MTR_0002s0110 34.463 177 98 5 4 162 3 179 3.13e-17 87.4
MS.gene85494.t1 MTR_2g063777 34.433 758 353 24 165 793 518 1260 5.00e-92 314
MS.gene85494.t1 MTR_2g063777 37.748 151 89 2 4 149 3 153 4.54e-22 102
MS.gene85494.t1 MTR_3g035480 34.332 734 360 21 163 787 517 1237 3.93e-91 312
MS.gene85494.t1 MTR_3g035480 34.444 180 100 5 4 165 3 182 1.89e-17 88.2
MS.gene85494.t1 MTR_0005s0200 36.323 669 356 16 156 795 527 1154 5.59e-91 310
MS.gene85494.t1 MTR_0005s0200 38.732 142 82 2 10 147 27 167 8.77e-19 92.4
MS.gene85494.t1 MTR_2g039090 34.146 738 369 21 159 795 501 1222 1.89e-90 310
MS.gene85494.t1 MTR_2g039090 34.014 147 83 3 4 150 3 135 8.74e-15 79.3
MS.gene85494.t1 MTR_0002s0090 34.641 739 358 23 163 793 517 1238 2.20e-90 310
MS.gene85494.t1 MTR_0002s0090 35.000 180 99 5 4 165 3 182 4.02e-18 90.1
MS.gene85494.t1 MTR_3g035500 34.641 739 358 23 163 793 517 1238 2.20e-90 310
MS.gene85494.t1 MTR_3g035500 35.000 180 99 5 4 165 3 182 4.02e-18 90.1
MS.gene85494.t1 MTR_4g050410 34.862 763 353 25 163 795 516 1264 3.03e-90 309
MS.gene85494.t1 MTR_4g050410 34.694 147 91 3 4 150 3 144 1.69e-15 81.6
MS.gene85494.t1 MTR_1643s0010 55.147 272 106 3 306 569 1 264 4.48e-89 284
MS.gene85494.t1 MTR_3g022730 53.746 307 114 3 490 770 3 307 4.68e-87 283
MS.gene85494.t1 MTR_3g022730 67.879 165 52 1 630 793 266 430 1.65e-62 217
MS.gene85494.t1 MTR_3g020890 33.913 690 328 15 220 793 565 1242 1.15e-86 299
MS.gene85494.t1 MTR_3g020890 35.172 145 80 2 6 146 5 139 1.45e-16 85.1
MS.gene85494.t1 MTR_3g014040 36.377 668 329 20 209 793 556 1210 4.84e-85 294
MS.gene85494.t1 MTR_3g014040 42.308 156 80 2 4 151 3 156 2.03e-19 94.4
MS.gene85494.t1 MTR_0137s0010 34.914 696 378 20 158 793 52 732 1.07e-84 285
MS.gene85494.t1 MTR_3g435720 32.589 761 369 20 163 793 517 1263 2.95e-84 292
MS.gene85494.t1 MTR_3g435720 35.294 153 90 2 4 149 3 153 5.99e-22 102
MS.gene85494.t1 MTR_2g014840 32.844 749 371 18 161 793 513 1245 1.91e-83 290
MS.gene85494.t1 MTR_2g014840 41.892 148 75 3 4 146 3 144 9.38e-23 105
MS.gene85494.t1 MTR_3g022240 43.122 378 151 9 310 634 1 367 1.32e-82 269
MS.gene85494.t1 MTR_3g033110 32.980 755 354 20 163 793 516 1242 5.05e-82 286
MS.gene85494.t1 MTR_3g033110 30.058 173 102 3 4 162 3 170 5.94e-15 79.7
MS.gene85494.t1 MTR_3g032150 36.858 662 346 21 163 767 515 1161 1.13e-81 285
MS.gene85494.t1 MTR_3g032150 38.194 144 84 2 7 145 4 147 3.65e-20 96.7
MS.gene85494.t1 MTR_3g032150 31.511 311 178 13 495 787 976 1269 2.90e-13 74.3
MS.gene85494.t1 MTR_3g035960 36.878 583 296 16 163 722 517 1050 3.09e-81 284
MS.gene85494.t1 MTR_3g035960 36.158 177 95 5 4 162 3 179 1.76e-20 97.8
MS.gene85494.t1 MTR_3g035960 29.703 303 178 12 501 793 968 1245 3.95e-13 73.9
MS.gene85494.t1 MTR_8g446950 34.196 734 370 24 161 795 538 1257 2.91e-80 281
MS.gene85494.t1 MTR_3g032200 36.598 582 294 16 163 722 521 1049 5.71e-80 280
MS.gene85494.t1 MTR_3g032200 29.412 153 100 2 4 148 3 155 1.71e-13 75.1
MS.gene85494.t1 MTR_3g031940 36.192 583 296 16 163 722 521 1050 1.35e-79 279
MS.gene85494.t1 MTR_3g031940 32.258 186 99 4 631 793 1086 1267 2.21e-14 78.2
MS.gene85494.t1 MTR_3g031940 30.519 154 97 3 4 148 3 155 2.19e-13 74.7
MS.gene85494.t1 MTR_3g032340 33.976 674 330 18 224 795 629 1289 2.38e-79 278
MS.gene85494.t1 MTR_3g032340 27.922 154 102 2 6 150 5 158 1.13e-11 69.3
MS.gene85494.t1 MTR_3g032800 37.912 546 287 15 163 671 517 1047 4.21e-79 278
MS.gene85494.t1 MTR_3g032800 38.667 150 87 2 4 148 3 152 2.63e-22 103
MS.gene85494.t1 MTR_3g032800 36.970 165 100 3 631 795 1083 1243 2.39e-20 97.4
MS.gene85494.t1 MTR_8g030860 37.651 579 284 17 163 719 524 1047 5.60e-79 277
MS.gene85494.t1 MTR_8g030860 32.000 150 95 3 4 148 3 150 9.83e-15 79.3
MS.gene85494.t1 MTR_0002s0120 36.395 577 289 18 163 715 300 822 1.39e-78 270
MS.gene85494.t1 MTR_3g030960 36.968 587 285 16 163 722 517 1045 2.83e-78 275
MS.gene85494.t1 MTR_3g030960 36.667 150 90 2 4 148 3 152 9.67e-22 102
MS.gene85494.t1 MTR_3g030960 31.183 186 101 4 631 793 1081 1262 4.03e-12 70.9
MS.gene85494.t1 MTR_3g032500 35.739 582 301 14 163 722 521 1051 1.93e-77 273
MS.gene85494.t1 MTR_3g032500 29.870 154 98 2 4 148 3 155 3.04e-13 74.3
MS.gene85494.t1 MTR_1g008240 33.103 725 365 20 146 771 493 1196 8.34e-77 271
MS.gene85494.t1 MTR_1g008240 30.769 169 94 4 6 162 1 158 3.87e-13 73.9
MS.gene85494.t1 MTR_3g032370 36.007 586 302 14 163 726 515 1049 1.24e-76 271
MS.gene85494.t1 MTR_3g032370 37.500 144 85 2 7 145 4 147 3.03e-20 97.1
MS.gene85494.t1 MTR_3g032370 32.492 317 181 13 495 793 1028 1329 1.08e-17 89.0
MS.gene85494.t1 MTR_3g036050 34.558 599 309 14 146 723 120 656 3.16e-76 266
MS.gene85494.t1 MTR_3g032960 31.177 773 369 20 163 795 517 1266 4.05e-76 269
MS.gene85494.t1 MTR_3g032960 36.667 150 90 2 4 148 3 152 1.11e-21 101
MS.gene85494.t1 MTR_0603s0010 32.353 714 373 21 161 782 575 1270 4.80e-76 269
MS.gene85494.t1 MTR_4g019360 33.524 701 364 19 177 789 453 1139 2.32e-75 266
MS.gene85494.t1 MTR_3g030980 34.842 663 357 19 163 764 517 1165 2.43e-75 267
MS.gene85494.t1 MTR_3g030980 36.667 150 90 2 4 148 3 152 1.21e-21 101
MS.gene85494.t1 MTR_3g030980 37.195 164 70 5 632 795 1181 1311 6.56e-17 86.3
MS.gene85494.t1 MTR_3g014510 32.129 747 332 21 216 793 573 1313 2.63e-75 267
MS.gene85494.t1 MTR_3g014510 40.645 155 84 3 3 151 1 153 1.07e-21 101
MS.gene85494.t1 MTR_3g028040 36.972 568 283 17 209 752 563 1079 3.73e-75 266
MS.gene85494.t1 MTR_3g028040 38.926 149 82 3 4 145 3 149 9.18e-20 95.5
MS.gene85494.t1 MTR_3g014360 31.289 799 370 24 161 793 500 1285 3.84e-75 266
MS.gene85494.t1 MTR_3g014360 43.624 149 76 3 3 145 1 147 1.70e-22 104
MS.gene85494.t1 MTR_3g033080 42.278 395 199 8 163 534 516 904 7.28e-75 262
MS.gene85494.t1 MTR_3g033080 35.862 145 89 3 4 148 3 143 3.13e-17 87.0
MS.gene85494.t1 MTR_3g032110 33.531 674 331 19 224 795 626 1284 8.10e-75 265
MS.gene85494.t1 MTR_3g032110 36.735 147 88 2 4 145 3 149 5.73e-22 102
MS.gene85494.t1 MTR_3g071130 35.516 611 329 17 201 793 545 1108 1.20e-74 263
MS.gene85494.t1 MTR_3g071130 32.895 152 83 3 3 150 1 137 1.89e-14 78.2
MS.gene85494.t1 MTR_3g033380 32.730 773 355 20 163 793 521 1270 2.26e-74 264
MS.gene85494.t1 MTR_3g033380 30.519 154 97 3 4 148 3 155 1.88e-13 75.1
MS.gene85494.t1 MTR_3g071070 35.352 611 330 17 201 793 340 903 4.35e-74 259
MS.gene85494.t1 MTR_3g034460 37.430 537 260 16 209 722 547 1030 6.80e-74 262
MS.gene85494.t1 MTR_3g034430 39.381 485 224 14 209 671 563 999 1.34e-73 262
MS.gene85494.t1 MTR_3g034430 35.948 153 89 2 4 149 3 153 3.24e-17 87.4
MS.gene85494.t1 MTR_3g034430 31.280 211 105 6 614 793 1069 1270 1.99e-14 78.2
MS.gene85494.t1 MTR_3g034380 36.207 580 293 18 209 764 562 1088 2.16e-73 261
MS.gene85494.t1 MTR_3g034380 36.184 152 88 2 4 148 3 152 1.07e-17 89.0
MS.gene85494.t1 MTR_3g435740 31.339 769 368 21 163 793 561 1307 2.38e-73 261
MS.gene85494.t1 MTR_3g435740 30.939 181 90 4 4 162 48 215 7.53e-16 82.8
MS.gene85494.t1 MTR_3g032760 35.385 585 297 14 163 722 517 1045 2.64e-73 261
MS.gene85494.t1 MTR_3g032760 36.184 152 88 2 4 148 3 152 1.55e-15 81.6
MS.gene85494.t1 MTR_3g032760 32.948 173 90 3 646 795 1095 1264 2.05e-15 81.3
MS.gene85494.t1 MTR_5g037590 32.323 693 374 20 187 795 501 1182 2.79e-73 260
MS.gene85494.t1 MTR_1g047800 36.081 546 289 13 156 673 504 1017 1.44e-72 257
MS.gene85494.t1 MTR_1g047800 36.552 145 78 3 5 145 4 138 7.94e-17 85.9
MS.gene85494.t1 MTR_7g078790 41.795 390 201 8 164 534 506 888 5.09e-72 254
MS.gene85494.t1 MTR_7g078790 37.762 143 78 3 7 145 4 139 6.02e-14 76.3
MS.gene85494.t1 MTR_1g045960 32.679 713 367 24 179 795 503 1198 1.15e-71 256
MS.gene85494.t1 MTR_6g084550 42.748 393 193 9 146 520 493 871 9.67e-70 246
MS.gene85494.t1 MTR_6g084550 36.054 147 87 3 6 145 5 151 1.15e-19 94.7
MS.gene85494.t1 MTR_3g435220 32.958 710 359 23 187 795 499 1192 1.24e-69 249
MS.gene85494.t1 MTR_3g435220 34.868 152 88 3 18 162 9 156 5.91e-12 70.1
MS.gene85494.t1 MTR_3g011620 32.475 699 363 25 187 793 545 1226 7.26e-69 248
MS.gene85494.t1 MTR_5g095910 35.096 624 362 19 161 767 516 1113 1.75e-68 246
MS.gene85494.t1 MTR_5g095910 31.014 345 184 11 454 793 942 1237 1.61e-23 107
MS.gene85494.t1 MTR_5g095910 43.836 146 72 4 7 146 6 147 4.78e-22 102
MS.gene85494.t1 MTR_3g070590 34.391 599 300 16 208 793 548 1066 3.84e-65 236
MS.gene85494.t1 MTR_3g070590 32.895 152 83 3 3 150 1 137 1.96e-14 78.2
MS.gene85494.t1 MTR_3g014320 32.196 674 367 21 161 793 515 1139 4.41e-65 237
MS.gene85494.t1 MTR_3g014320 38.926 149 83 3 3 145 1 147 8.61e-17 85.9
MS.gene85494.t1 MTR_3g014320 30.159 315 189 12 501 795 1035 1338 2.92e-16 84.3
MS.gene85494.t1 MTR_0083s0120 34.159 565 283 13 163 722 66 546 1.08e-64 232
MS.gene85494.t1 MTR_1g037610 32.938 674 383 20 161 771 515 1182 1.67e-64 235
MS.gene85494.t1 MTR_1g037610 27.719 469 216 18 431 783 877 1338 3.23e-18 90.5
MS.gene85494.t1 MTR_1g037610 38.168 131 73 3 21 145 19 147 2.08e-16 84.7
MS.gene85494.t1 MTR_3g034650 32.189 699 315 26 202 795 102 746 4.19e-64 229
MS.gene85494.t1 MTR_3g014390 32.569 654 345 21 166 793 518 1101 7.07e-63 230
MS.gene85494.t1 MTR_3g014390 39.216 153 87 2 3 151 1 151 3.52e-20 97.1
MS.gene85494.t1 MTR_3g014390 28.939 311 184 11 498 792 1025 1314 1.05e-15 82.4
MS.gene85494.t1 MTR_8g106550 32.630 616 303 19 164 751 450 981 7.28e-62 226
MS.gene85494.t1 MTR_3g435210 32.224 661 364 26 161 789 320 928 7.94e-62 226
MS.gene85494.t1 MTR_3g020620 36.345 498 265 17 181 651 684 1156 2.93e-61 225
MS.gene85494.t1 MTR_3g023020 71.631 141 39 1 654 793 2 142 1.95e-58 196
MS.gene85494.t1 MTR_8g039260 31.749 589 288 18 144 679 39 566 1.05e-57 207
MS.gene85494.t1 MTR_0267s0070 41.071 392 205 8 161 531 521 907 6.00e-57 213
MS.gene85494.t1 MTR_0267s0070 36.242 149 91 1 3 151 1 145 7.19e-15 79.7
MS.gene85494.t1 MTR_2053s0010 67.143 140 46 0 654 793 2 141 3.99e-56 189
MS.gene85494.t1 MTR_2g014730 31.250 624 297 17 217 767 532 1096 2.48e-55 207
MS.gene85494.t1 MTR_2g014730 38.298 141 83 2 7 146 6 143 4.97e-20 96.3
MS.gene85494.t1 MTR_6g047450 30.982 652 375 24 163 793 503 1100 1.71e-52 198
MS.gene85494.t1 MTR_6g046480 31.832 644 350 26 163 789 503 1074 1.45e-51 195
MS.gene85494.t1 MTR_2g014720 31.481 540 268 13 221 752 477 922 6.35e-51 193
MS.gene85494.t1 MTR_3g035815 65.574 122 42 0 672 793 1 122 5.11e-49 169
MS.gene85494.t1 MTR_3g007190 31.894 602 305 28 277 793 482 1063 1.24e-48 186
MS.gene85494.t1 MTR_3g007190 42.157 102 59 0 3 104 1 102 5.06e-14 76.6
MS.gene85494.t1 MTR_3g023320 31.281 601 345 21 211 791 544 1096 1.25e-48 186
MS.gene85494.t1 MTR_3g026660 32.884 593 318 24 221 793 547 1079 1.58e-47 183
MS.gene85494.t1 MTR_6g046930 32.918 562 314 17 247 789 571 1088 1.63e-47 183
MS.gene85494.t1 MTR_3g026660 32.884 593 318 24 221 793 604 1136 1.98e-47 182
MS.gene85494.t1 MTR_3g022810 50.230 217 73 3 445 653 98 287 5.04e-47 171
MS.gene85494.t1 MTR_3g022260 58.537 164 48 4 634 793 4 151 5.58e-47 164
MS.gene85494.t1 MTR_3g086070 31.933 595 314 21 224 789 554 1086 4.61e-46 178
MS.gene85494.t1 MTR_0144s0060 32.007 553 307 17 241 770 566 1072 1.69e-45 177
MS.gene85494.t1 MTR_0144s0060 46.377 138 69 4 241 375 1008 1143 2.70e-17 87.4
MS.gene85494.t1 MTR_3g033130 28.418 746 317 23 216 793 533 1229 2.98e-45 176
MS.gene85494.t1 MTR_3g033130 31.724 145 95 2 4 148 3 143 4.07e-14 77.0
MS.gene85494.t1 MTR_5g028070 30.583 618 310 24 217 788 686 1230 1.56e-44 174
MS.gene85494.t1 MTR_3g014470 37.535 357 180 10 161 502 480 808 1.59e-44 172
MS.gene85494.t1 MTR_3g014470 39.869 153 86 2 3 151 1 151 1.58e-20 97.4
MS.gene85494.t1 MTR_0133s0020 32.088 589 332 21 216 789 554 1089 2.53e-44 173
MS.gene85494.t1 MTR_6g046620 33.158 570 293 25 241 789 520 1022 5.04e-44 172
MS.gene85494.t1 MTR_0256s0050 31.481 594 327 23 224 793 524 1061 6.86e-44 172
MS.gene85494.t1 MTR_6g052760 30.560 589 336 18 224 794 559 1092 7.69e-43 168
MS.gene85494.t1 MTR_5g028340 30.870 609 324 25 208 788 535 1074 2.26e-42 167
MS.gene85494.t1 MTR_5g028290 30.537 596 322 23 224 788 579 1113 2.96e-42 167
MS.gene85494.t1 MTR_6g052455 28.404 683 408 19 130 794 362 981 3.02e-42 166
MS.gene85494.t1 MTR_5g028750 29.825 627 364 24 189 791 497 1071 3.04e-42 166
MS.gene85494.t1 MTR_5g028610 31.023 606 318 26 217 793 541 1075 8.58e-42 165
MS.gene85494.t1 MTR_4g126000 33.974 468 227 17 224 649 426 853 1.01e-41 164
MS.gene85494.t1 MTR_5g028420 30.841 642 335 27 189 788 507 1081 1.40e-41 164
MS.gene85494.t1 MTR_8g036195 31.376 596 344 21 216 793 531 1079 1.75e-41 164
MS.gene85494.t1 MTR_0133s0030 30.435 621 315 23 216 793 547 1093 1.84e-41 164
MS.gene85494.t1 MTR_2g060700 34.060 367 178 8 211 555 343 667 2.05e-41 162
MS.gene85494.t1 MTR_5g037450 30.623 578 331 21 140 671 499 1052 5.13e-41 163
MS.gene85494.t1 MTR_7g071940 29.233 626 274 21 189 793 529 1006 1.38e-40 161
MS.gene85494.t1 MTR_5g035530 32.394 497 277 18 221 671 445 928 2.07e-40 160
MS.gene85494.t1 MTR_6g046130 31.720 599 315 20 216 791 545 1072 3.87e-40 160
MS.gene85494.t1 MTR_5g071670 39.296 341 182 10 228 555 555 883 2.58e-39 157
MS.gene85494.t1 MTR_5g071670 33.645 214 104 6 329 536 1132 1313 5.17e-14 77.0
MS.gene85494.t1 MTR_1g022380 33.259 448 238 16 247 671 576 985 3.07e-39 157
MS.gene85494.t1 MTR_6g016430 32.712 483 284 17 212 671 557 1021 3.20e-39 157
MS.gene85494.t1 MTR_6g046440 31.550 542 307 20 270 793 540 1035 3.60e-39 157
MS.gene85494.t1 MTR_5g037460 33.166 398 232 12 221 596 427 812 4.32e-39 156
MS.gene85494.t1 MTR_5g035280 32.869 502 270 21 221 671 560 1045 7.02e-39 156
MS.gene85494.t1 MTR_4g055630 34.707 461 240 17 247 671 584 1019 4.61e-38 153
MS.gene85494.t1 MTR_1g078450 59.231 130 51 1 306 435 1 128 1.02e-37 142
MS.gene85494.t1 MTR_5g070490 40.683 322 166 12 247 555 578 887 1.84e-37 152
MS.gene85494.t1 MTR_6g016420 33.333 474 275 17 220 671 543 997 5.48e-37 150
MS.gene85494.t1 MTR_0230s0010 32.941 425 239 16 130 535 412 809 9.22e-37 149
MS.gene85494.t1 MTR_5g072340 34.375 448 223 16 247 678 583 975 1.12e-36 149
MS.gene85494.t1 MTR_5g071570 38.529 340 182 12 214 539 553 879 1.90e-36 148
MS.gene85494.t1 MTR_5g071780 35.931 462 247 19 214 649 551 989 4.10e-36 147
MS.gene85494.t1 MTR_5g071310 40.190 316 164 11 247 549 548 851 5.42e-36 147
MS.gene85494.t1 MTR_5g071220 38.700 323 176 10 247 555 581 895 5.50e-36 147
MS.gene85494.t1 MTR_5g071220 38.700 323 176 10 247 555 581 895 5.85e-36 147
MS.gene85494.t1 MTR_5g072140 32.806 506 279 18 164 654 471 930 6.52e-36 146
MS.gene85494.t1 MTR_5g071800 34.021 485 251 19 217 678 559 997 9.23e-36 146
MS.gene85494.t1 MTR_5g070960 34.545 440 244 13 247 671 583 993 1.85e-35 145
MS.gene85494.t1 MTR_1g023600 39.385 325 169 12 247 555 578 890 1.89e-35 145
MS.gene85494.t1 MTR_6g046570 29.848 593 331 20 217 793 554 1077 2.47e-35 145
MS.gene85494.t1 MTR_5g035480 31.501 473 241 19 219 672 546 954 2.64e-35 144
MS.gene85494.t1 MTR_2g078070 29.680 593 331 25 137 669 496 1062 3.93e-35 144
MS.gene85494.t1 MTR_0511s0020 28.134 686 388 25 130 794 471 1072 1.72e-34 142
MS.gene85494.t1 MTR_3g071080 31.546 317 191 7 495 795 108 414 2.46e-34 137
MS.gene85494.t1 MTR_3g071040 31.546 317 191 7 495 795 108 414 2.46e-34 137
MS.gene85494.t1 MTR_3g071010 31.546 317 191 7 495 795 117 423 3.54e-34 136
MS.gene85494.t1 MTR_3g070650 31.429 315 190 7 497 795 191 495 1.10e-33 136
MS.gene85494.t1 MTR_5g034770 36.474 329 178 14 220 535 545 855 1.33e-33 139
MS.gene85494.t1 MTR_5g071823 38.700 323 175 12 247 555 579 892 1.80e-33 139
MS.gene85494.t1 MTR_5g071850 38.700 323 175 12 247 555 579 892 1.80e-33 139
MS.gene85494.t1 MTR_5g035240 33.173 416 237 16 157 555 507 898 4.44e-33 137
MS.gene85494.t1 MTR_5g071470 34.423 459 230 17 228 671 562 964 1.14e-32 136
MS.gene85494.t1 MTR_5g040770 33.807 352 190 11 220 536 330 673 2.68e-32 135
MS.gene85494.t1 MTR_6g016420 32.265 468 250 18 220 671 543 959 5.32e-32 134
MS.gene85494.t1 MTR_3g436130 44.253 174 88 3 296 468 18 183 6.26e-32 123
MS.gene85494.t1 MTR_5g072250 40.816 294 154 9 247 528 579 864 1.06e-31 133
MS.gene85494.t1 MTR_5g037500 30.323 465 283 13 221 671 498 935 2.06e-31 132
MS.gene85494.t1 MTR_4g021690 29.125 594 323 28 150 712 497 1023 1.09e-30 130
MS.gene85494.t1 MTR_7g089080 32.495 477 200 20 221 672 898 1277 2.34e-30 129
MS.gene85494.t1 MTR_6g046450 27.306 553 305 18 247 789 623 1088 2.65e-30 129
MS.gene85494.t1 MTR_4g022460 31.330 466 240 21 241 678 590 1003 1.20e-28 124
MS.gene85494.t1 MTR_5g070470 33.860 443 220 15 247 671 582 969 5.54e-28 122
MS.gene85494.t1 MTR_3g015550 31.200 375 204 19 147 482 514 873 1.08e-27 120
MS.gene85494.t1 MTR_3g015550 31.200 375 204 19 147 482 477 836 1.08e-27 120
MS.gene85494.t1 MTR_4g022560 31.328 399 236 14 150 519 495 884 1.55e-27 120
MS.gene85494.t1 MTR_3g015280 35.950 242 138 10 213 446 549 781 1.47e-26 116
MS.gene85494.t1 MTR_5g039570 32.710 321 184 9 184 490 288 590 8.00e-26 113
MS.gene85494.t1 MTR_4g022540 28.470 562 337 24 150 693 496 1010 1.40e-25 114
MS.gene85494.t1 MTR_4g022480 34.062 320 177 14 224 519 572 881 1.84e-25 113
MS.gene85494.t1 MTR_4g050790 35.918 245 132 11 218 446 556 791 2.97e-25 112
MS.gene85494.t1 MTR_0083s0110 39.456 147 85 3 6 148 5 151 1.25e-24 102
MS.gene85494.t1 MTR_3g015560 35.926 270 146 12 218 466 555 818 1.51e-24 110
MS.gene85494.t1 MTR_3g015500 31.065 338 192 16 137 462 518 826 9.07e-24 107
MS.gene85494.t1 MTR_3g014530 42.336 137 73 2 6 136 1 137 2.13e-23 97.8
MS.gene85494.t1 MTR_0003s0170 37.589 141 85 1 9 146 6 146 3.89e-23 100
MS.gene85494.t1 MTR_2g039040 36.898 187 111 3 157 336 385 571 1.22e-22 103
MS.gene85494.t1 MTR_2g039040 35.099 151 82 3 5 147 4 146 1.17e-11 68.6
MS.gene85494.t1 MTR_0425s0030 59.140 93 24 1 668 760 83 161 4.26e-21 91.3
MS.gene85494.t1 MTR_3g024450 67.143 70 22 1 725 793 1 70 4.53e-21 88.2
MS.gene85494.t1 MTR_5g040900 29.191 346 174 11 247 552 542 856 1.23e-20 97.8
MS.gene85494.t1 MTR_2g014820 39.041 146 78 3 6 146 5 144 1.60e-20 97.4
MS.gene85494.t1 MTR_2g014820 34.375 160 89 3 633 792 441 584 3.19e-15 80.5
MS.gene85494.t1 MTR_3g048110 35.404 161 83 2 635 795 38 177 4.31e-20 89.4
MS.gene85494.t1 MTR_6g084540 37.126 167 92 3 629 793 71 226 6.99e-20 89.7
MS.gene85494.t1 MTR_4g022950 31.419 296 169 11 250 519 1 288 8.22e-20 93.2
MS.gene85494.t1 MTR_2g014830 35.172 145 82 3 7 146 6 143 1.50e-19 87.0
MS.gene85494.t1 MTR_6g046750 27.879 495 268 23 320 789 4 434 1.68e-19 92.8
MS.gene85494.t1 MTR_0958s0010 60.563 71 28 0 477 547 53 123 2.01e-19 85.1
MS.gene85494.t1 MTR_3g014500 36.424 151 92 2 1 151 1 147 2.72e-19 86.7
MS.gene85494.t1 MTR_1g037730 41.558 154 84 2 4 151 3 156 9.57e-19 89.4
MS.gene85494.t1 MTR_5g035200 31.818 352 200 16 322 649 2 337 2.64e-18 87.8
MS.gene85494.t1 MTR_3g035840 36.735 147 84 2 6 145 5 149 3.05e-18 89.4
MS.gene85494.t1 MTR_0144s0010 28.778 483 250 17 329 795 2 406 7.03e-17 84.7
MS.gene85494.t1 MTR_0005s0210 30.909 275 150 12 481 729 167 427 7.35e-17 84.3
MS.gene85494.t1 MTR_3g014460 28.027 446 193 21 464 793 8 441 1.84e-16 83.2
MS.gene85494.t1 MTR_3g048040 37.324 142 68 4 645 783 59 182 2.23e-16 80.1
MS.gene85494.t1 MTR_2g038510 30.618 356 206 17 185 528 568 894 3.92e-16 83.6
MS.gene85494.t1 MTR_5g035450 28.519 270 161 7 193 450 50 299 8.90e-16 80.9
MS.gene85494.t1 MTR_3g031860 31.720 186 100 4 631 793 1 182 1.49e-15 78.6
MS.gene85494.t1 MTR_6g046760 27.530 494 267 22 320 790 4 429 1.91e-15 80.1
MS.gene85494.t1 MTR_3g012240 28.571 357 219 14 220 561 630 965 4.28e-15 80.1
MS.gene85494.t1 MTR_4g022960 27.455 499 260 24 217 693 541 959 1.66e-14 78.2
MS.gene85494.t1 MTR_3g012310 30.199 351 206 15 208 538 572 903 3.26e-14 77.4
MS.gene85494.t1 MTR_3g011390 28.614 339 209 12 213 536 580 900 3.84e-14 77.0
MS.gene85494.t1 MTR_3g011420 26.500 400 240 18 156 534 531 897 8.02e-14 75.9
MS.gene85494.t1 MTR_0005s0230 46.809 94 49 1 227 319 383 476 9.45e-14 75.1
MS.gene85494.t1 MTR_3g011370 27.628 333 203 12 217 530 582 895 1.04e-13 75.9
MS.gene85494.t1 MTR_0691s0020 29.091 330 202 9 217 530 582 895 2.63e-13 74.3
MS.gene85494.t1 MTR_3g011270 27.273 330 209 9 219 534 583 895 3.65e-13 73.9
MS.gene85494.t1 MTR_3g022980 55.556 54 24 0 490 543 5 58 3.71e-13 65.5
MS.gene85494.t1 MTR_5g021080 28.883 367 227 16 217 573 578 920 4.77e-13 73.6
MS.gene85494.t1 MTR_3g055930 28.977 352 211 16 205 538 584 914 5.97e-13 73.2
MS.gene85494.t1 MTR_3g069210 27.329 322 182 12 219 508 573 874 9.41e-13 72.4
MS.gene85494.t1 MTR_3g024280 39.640 111 49 2 209 318 170 263 9.42e-13 69.7
MS.gene85494.t1 MTR_8g062130 27.742 465 279 21 221 671 693 1114 2.24e-12 71.6
MS.gene85494.t1 MTR_8g062130 34.568 162 90 4 207 357 802 958 1.62e-11 68.9
MS.gene85494.t1 MTR_3g011460 29.377 337 197 15 217 534 581 895 2.43e-12 71.2
MS.gene85494.t1 MTR_5g027900 26.453 344 215 12 221 546 570 893 2.46e-12 71.2
MS.gene85494.t1 MTR_3g011280 28.144 334 205 12 217 534 550 864 3.25e-12 70.9
MS.gene85494.t1 MTR_1g090690 31.889 323 187 15 224 530 1226 1531 3.26e-12 71.2
MS.gene85494.t1 MTR_3g011280 28.144 334 205 12 217 534 582 896 4.34e-12 70.5
MS.gene85494.t1 MTR_3g011360 27.411 394 239 16 156 530 498 863 5.67e-12 70.1
MS.gene85494.t1 MTR_1g016210 27.273 319 198 10 208 512 577 875 6.65e-12 69.7
MS.gene85494.t1 MTR_8g062140 27.665 394 241 16 207 573 761 1137 9.62e-12 69.3
MS.gene85494.t1 MTR_8g062140 26.557 546 279 27 231 744 662 1117 3.51e-11 67.8
MS.gene85494.t1 MTR_3g012250 29.375 320 153 15 217 512 586 856 9.94e-12 69.3
MS.gene85494.t1 MTR_3g033160 38.554 83 51 0 6 88 34 116 1.05e-11 63.2
MS.gene85494.t1 MTR_8g037220 26.651 439 229 19 264 671 1562 1938 1.13e-11 69.3
MS.gene85494.t1 MTR_8g037220 26.651 439 229 19 264 671 1341 1717 1.31e-11 68.9
MS.gene85494.t1 MTR_5g027860 25.183 409 257 15 160 546 510 891 1.87e-11 68.6
MS.gene85494.t1 MTR_7g078300 33.466 251 143 10 216 462 566 796 2.31e-11 68.2
MS.gene85494.t1 MTR_3g012060 31.687 243 135 9 208 437 568 792 2.45e-11 68.2
MS.gene85494.t1 MTR_8g011590 27.040 429 240 16 150 526 389 796 3.62e-11 67.4
MS.gene85494.t1 MTR_3g056585 27.557 352 220 16 207 545 562 891 3.82e-11 67.4
MS.gene85494.t1 MTR_5g027870 26.904 394 228 17 185 541 517 887 5.59e-11 67.0
MS.gene85494.t1 MTR_3g012090 30.894 246 141 8 208 440 571 800 7.09e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene85494.t1 AT3G14470 36.458 480 272 12 77 531 438 909 5.66e-70 249
MS.gene85494.t1 AT3G14470 31.788 151 95 1 7 149 4 154 3.79e-15 80.5
MS.gene85494.t1 AT3G14470 36.458 480 272 12 77 531 438 909 5.66e-70 249
MS.gene85494.t1 AT3G14470 31.788 151 95 1 7 149 4 154 3.79e-15 80.5
MS.gene85494.t1 AT3G14460 38.325 394 225 7 156 531 506 899 2.35e-63 232
MS.gene85494.t1 AT3G14460 30.541 370 208 13 430 793 1092 1418 3.10e-25 113
MS.gene85494.t1 AT3G07040 25.507 345 229 11 202 526 540 876 1.63e-12 72.0
MS.gene85494.t1 AT1G58848 27.937 315 195 12 218 522 581 873 6.07e-12 70.1
MS.gene85494.t1 AT1G59218 27.937 315 195 12 218 522 581 873 6.07e-12 70.1
MS.gene85494.t1 AT1G59218 27.937 315 195 12 218 522 581 873 6.07e-12 70.1
MS.gene85494.t1 AT1G59218 27.937 315 195 12 218 522 581 873 6.07e-12 70.1
MS.gene85494.t1 AT1G58848 27.937 315 195 12 218 522 581 873 6.07e-12 70.1
MS.gene85494.t1 AT1G58390 28.882 322 191 14 218 529 580 873 2.08e-11 68.2
MS.gene85494.t1 AT1G58390 28.882 322 191 14 218 529 580 873 2.08e-11 68.2
MS.gene85494.t1 AT4G19050 26.078 487 239 21 218 628 464 905 2.57e-11 68.2
MS.gene85494.t1 AT1G58602 28.571 238 148 9 429 654 871 1098 2.90e-11 67.8
MS.gene85494.t1 AT1G58602 28.571 238 148 9 429 654 871 1098 2.90e-11 67.8
MS.gene85494.t1 AT1G58400 28.125 320 200 15 218 526 567 867 6.74e-11 66.6
MS.gene85494.t1 AT1G58400 28.125 320 200 15 218 526 577 877 6.77e-11 66.6
MS.gene85494.t1 AT1G58400 28.125 320 200 15 218 526 577 877 6.77e-11 66.6

Find 179 sgRNAs with CRISPR-Local

Find 279 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAAATCTTTCAACTCTTTA+TGG 0.034031 3.4:-12444239 MS.gene85494:CDS
ACCCAACTCCCTTTCTATTT+TGG 0.100041 3.4:-12444172 MS.gene85494:CDS
CGAGGGAAACTTTCTATTTC+AGG 0.130527 3.4:-12445413 MS.gene85494:CDS
GCTCAATGGTCAACCTATTT+AGG 0.194245 3.4:+12445222 None:intergenic
ATTTCAATGGCTTCTAATAT+TGG 0.215477 3.4:-12444825 MS.gene85494:CDS
CCTTCCTTCTTTGCAAGATT+TGG 0.221997 3.4:-12444880 MS.gene85494:CDS
AACCTATTTAGGTTACTATT+TGG 0.236003 3.4:+12445233 None:intergenic
TAGGATGACACTTGTCAATT+TGG 0.265875 3.4:+12444752 None:intergenic
TTTCTTAAAAGTTTGAATAT+TGG 0.270889 3.4:-12444675 MS.gene85494:CDS
GTGAATAAGTGCAAGGAAAA+TGG 0.275699 3.4:+12444555 None:intergenic
CCTCTGGAAGCAAATAGTTT+TGG 0.279560 3.4:+12444432 None:intergenic
CAGATCAAGATGACGTAAAT+TGG 0.280898 3.4:+12445565 None:intergenic
TTTAGCTTCCCTATCTCTTT+TGG 0.286852 3.4:+12445518 None:intergenic
CTAAATTCTCTGAATGATTT+CGG 0.307399 3.4:-12444390 MS.gene85494:CDS
AACGTTCTCCTTCCTCCTTT+TGG 0.315772 3.4:+12444115 None:intergenic
GAAGGGATTACGTAGTTTAA+TGG 0.318636 3.4:-12445867 MS.gene85494:CDS
GGCGCATGGGTCTGATATTA+AGG 0.324443 3.4:-12445459 MS.gene85494:CDS
TTTGTCCAATTTAGTATCTC+TGG 0.327466 3.4:-12445156 MS.gene85494:CDS
AAGAACATGCCAAAAGAGAT+AGG 0.345619 3.4:-12445527 MS.gene85494:CDS
AACCAAATAGTAACCTAAAT+AGG 0.349547 3.4:-12445235 MS.gene85494:CDS
AATCATTCAGAGAATTTAGT+TGG 0.353323 3.4:+12444394 None:intergenic
TAATTTACAGACACTACTAT+TGG 0.354888 3.4:-12445633 MS.gene85494:CDS
CAGAGCCAGAGATACTAAAT+TGG 0.357217 3.4:+12445151 None:intergenic
TAATAATTGTCCATTACTTA+AGG 0.358677 3.4:-12444145 MS.gene85494:CDS
AAATCTAGAATGGTCCTCTT+TGG 0.363001 3.4:-12444637 MS.gene85494:CDS
TTTGAAAGATAAGAAGCATT+TGG 0.369018 3.4:-12445348 MS.gene85494:CDS
AATAGAAAGCCTCTTCAGAT+AGG 0.378657 3.4:+12445082 None:intergenic
CTCAATACCTTGCTAGTAGA+AGG 0.386026 3.4:+12447198 None:intergenic
TGATTATGTGAAGGCTGAAC+AGG 0.386210 3.4:+12444460 None:intergenic
CCACAACTAGAGTCATTTCC+TGG 0.397234 3.4:-12444501 MS.gene85494:CDS
TTTCAATCCTTGTGTGAGAT+AGG 0.401616 3.4:+12445684 None:intergenic
ACATAACCATTCCTTCCAAT+TGG 0.404853 3.4:+12444977 None:intergenic
TGACATCAAGTTTGCTTCTA+CGG 0.406142 3.4:+12447415 None:intergenic
TTAATGGCACAAGGCACCTT+TGG 0.409605 3.4:-12445851 MS.gene85494:CDS
GAATCTGTTGCCACCAGCTC+TGG 0.412172 3.4:-12444325 MS.gene85494:CDS
GCTTTGGTATTGCTTCATTT+CGG 0.416794 3.4:+12447335 None:intergenic
CAATTCTATCAACCACGTAT+TGG 0.417734 3.4:-12447364 MS.gene85494:CDS
GAAATAGTCAATGAAATCAT+TGG 0.419231 3.4:+12447437 None:intergenic
CAATTTACGTCATCTTGATC+TGG 0.423916 3.4:-12445564 MS.gene85494:CDS
TCTGGCAAGCGCTCTAAACT+AGG 0.424740 3.4:+12444204 None:intergenic
TTTCAAAGCTAAAATGTTTG+CGG 0.432063 3.4:-12445784 MS.gene85494:CDS
ATTTAGTTAGTGTCTGAATT+CGG 0.432843 3.4:+12445495 None:intergenic
TCTTAAACATTATGCATATG+AGG 0.434199 3.4:-12447286 MS.gene85494:CDS
ACTTCTTCACGTACATGCTT+TGG 0.434753 3.4:+12447319 None:intergenic
CTGAAAGGACACGTCACATT+TGG 0.439319 3.4:-12445943 MS.gene85494:CDS
TAGAAAGATCTTTAAGCAAT+GGG 0.441610 3.4:+12444943 None:intergenic
GAAACTTTCTATTTCAGGGT+TGG 0.443219 3.4:-12445408 MS.gene85494:CDS
TGTTCAATAGAATTTGCTCC+AGG 0.443836 3.4:+12444703 None:intergenic
GTTGGAGGCTTCAATTTCAA+TGG 0.446414 3.4:-12444838 MS.gene85494:CDS
CTTAAAAGTTTGAATATTGG+TGG 0.447064 3.4:-12444672 MS.gene85494:CDS
AAATTGAAGCCTCCAACTCT+TGG 0.447171 3.4:+12444844 None:intergenic
TACAGGTTACAAATGGAATC+AGG 0.449759 3.4:+12445656 None:intergenic
CAATAACATGTTAATTGAAA+GGG 0.455175 3.4:-12445282 MS.gene85494:CDS
TTCAAATTGTCATGGAATAG+AGG 0.456348 3.4:-12445060 MS.gene85494:CDS
GAACAAACCCCACTCCCCTC+TGG 0.456438 3.4:+12444416 None:intergenic
CTTGCAGATAGAGGATGATA+AGG 0.456512 3.4:-12445978 MS.gene85494:intron
CAAATATAAAGATTTAAGAT+TGG 0.456722 3.4:+12444533 None:intergenic
ATTGCCAAATCTTGCAAAGA+AGG 0.459534 3.4:+12444876 None:intergenic
AAGAGTTGAAAGATTTGAGA+TGG 0.463973 3.4:+12444244 None:intergenic
AAGGGAAATGTCTGTCTTGG+AGG 0.464363 3.4:-12445264 MS.gene85494:CDS
GAGGGAAACTTTCTATTTCA+GGG 0.464561 3.4:-12445412 MS.gene85494:CDS
TGTTCTCTTCAATTAAAAGA+TGG 0.466884 3.4:-12445920 MS.gene85494:CDS
TACTGATTGCCAAGAGTTGG+AGG 0.467106 3.4:-12444853 MS.gene85494:CDS
TAAATTATACAGGTTACAAA+TGG 0.468361 3.4:+12445649 None:intergenic
TGAAAGGGAAATGTCTGTCT+TGG 0.468609 3.4:-12445267 MS.gene85494:CDS
TCCAAAATAGAAAGGGAGTT+GGG 0.470243 3.4:+12444171 None:intergenic
TGCAAAGAAGGAAGGTGGTT+GGG 0.470301 3.4:+12444888 None:intergenic
GTAGTGTCTGTAAATTATAC+AGG 0.474230 3.4:+12445639 None:intergenic
AGTTGTTTCCCTATCTGAAG+AGG 0.476380 3.4:-12445091 MS.gene85494:CDS
GTATTGTGTTGCTTATCTCC+TGG 0.477011 3.4:+12445819 None:intergenic
TGAAATTCTTGAGAAGCAAA+AGG 0.477890 3.4:-12447115 MS.gene85494:CDS
TGGTACTTCTCCTTAAGTAA+TGG 0.479740 3.4:+12444135 None:intergenic
TCTTTCATCATTCTTTCAAG+TGG 0.480185 3.4:-12447478 MS.gene85494:CDS
CCAAAACTATTTGCTTCCAG+AGG 0.482120 3.4:-12444432 MS.gene85494:CDS
AAGGAATGGTTATGTGTTGA+AGG 0.483002 3.4:-12444969 MS.gene85494:CDS
AACTAAATTTGTTGTGGTAG+AGG 0.485240 3.4:-12445480 MS.gene85494:CDS
TATTAATATCCAAAATAGAA+AGG 0.485602 3.4:+12444163 None:intergenic
TAGTGACGAGTTTGAAATTG+TGG 0.486218 3.4:-12444364 MS.gene85494:CDS
TCAATAACATGTTAATTGAA+AGG 0.488372 3.4:-12445283 MS.gene85494:CDS
ACAACATATTTATAAGATGA+AGG 0.489962 3.4:-12445885 MS.gene85494:CDS
CATGTTATTGATTTCTCTAG+TGG 0.491276 3.4:+12445295 None:intergenic
AGAGTAAGAGCCACCAGAGC+TGG 0.492266 3.4:+12444312 None:intergenic
CTTTCTATTTCAAATTGTCA+TGG 0.492507 3.4:-12445068 MS.gene85494:CDS
AGATAGGGAAACAACTCAAA+TGG 0.495471 3.4:+12445098 None:intergenic
TGTGAACATGTCCAATTGGA+AGG 0.496053 3.4:-12444988 MS.gene85494:CDS
CTAGAGTCATTTCCTGGTGG+AGG 0.496400 3.4:-12444495 MS.gene85494:CDS
ATTTGCTTCCAGAGGGGAGT+GGG 0.498909 3.4:-12444424 MS.gene85494:CDS
ATTAATATCCAAAATAGAAA+GGG 0.501234 3.4:+12444164 None:intergenic
TCAAGTCATTGCATCTTCCC+TGG 0.504991 3.4:-12444721 MS.gene85494:CDS
CACCTTTGGTGGCAGACACC+AGG 0.510573 3.4:-12445837 MS.gene85494:CDS
CACCATGTCCATGGGAGAGT+TGG 0.517291 3.4:-12447514 None:intergenic
TTTAGAGCGCTTGCCAGAGG+AGG 0.522713 3.4:-12444199 MS.gene85494:CDS
TCTGTTGCCACCAGCTCTGG+TGG 0.522728 3.4:-12444322 MS.gene85494:CDS
ATGGCACAAGGCACCTTTGG+TGG 0.525526 3.4:-12445848 MS.gene85494:CDS
GGTGGCAACAGATTCTCCTC+TGG 0.526713 3.4:+12444333 None:intergenic
TGGGTCTGATATTAAGGAGT+TGG 0.528769 3.4:-12445453 MS.gene85494:CDS
CTCCTGGTGTCTGCCACCAA+AGG 0.529067 3.4:+12445835 None:intergenic
ATCCAAAATAGAAAGGGAGT+TGG 0.531324 3.4:+12444170 None:intergenic
ACATGTCCAATTGGAAGGAA+TGG 0.533334 3.4:-12444983 MS.gene85494:CDS
TTTGTTGTGGTAGAGGCGCA+TGG 0.534722 3.4:-12445473 MS.gene85494:CDS
TCTGAAGGGAGTTCAGTCAA+TGG 0.535082 3.4:+12445602 None:intergenic
ATAGAAAGCCTCTTCAGATA+GGG 0.535458 3.4:+12445083 None:intergenic
ATAGAAAGATCTTTAAGCAA+TGG 0.536288 3.4:+12444942 None:intergenic
TATCTCACACAAGGATTGAA+AGG 0.538820 3.4:-12445682 MS.gene85494:CDS
TTGCAATCTCATCTAACAGC+TGG 0.539802 3.4:+12447259 None:intergenic
AATTACTGATTGCCAAGAGT+TGG 0.541652 3.4:-12444856 MS.gene85494:CDS
AGTGCCTCGGTAGTGCTCAA+TGG 0.546618 3.4:+12445208 None:intergenic
GAGTTGGGTAGACCCTCCTC+TGG 0.549620 3.4:+12444186 None:intergenic
ATGACACTTGTCAATTTGGA+AGG 0.554344 3.4:+12444756 None:intergenic
TCGATAGTGCAAATCTAGAA+TGG 0.555229 3.4:-12444647 MS.gene85494:CDS
TATTTGCTTCCAGAGGGGAG+TGG 0.557315 3.4:-12444425 MS.gene85494:CDS
TCAGCTTTCAGTCTCTTCAG+TGG 0.558223 3.4:+12447228 None:intergenic
AGAACATGCCAAAAGAGATA+GGG 0.558706 3.4:-12445526 MS.gene85494:CDS
CAGTCAAGTATCCTCACAGA+AGG 0.559061 3.4:+12444072 None:intergenic
TCCATGGGAGAGTTGGTTGG+TGG 0.561530 3.4:-12447507 MS.gene85494:CDS
GACACTAACTAAATTTGTTG+TGG 0.562927 3.4:-12445486 MS.gene85494:CDS
CTTAAATCTTTATATTTGTG+CGG 0.562961 3.4:-12444528 MS.gene85494:CDS
ACTTAAGGAGAAGTACCAAA+AGG 0.563938 3.4:-12444130 MS.gene85494:CDS
TGAAGGCTGAACAGGGTGGA+AGG 0.564004 3.4:+12444468 None:intergenic
TTAGAGCGCTTGCCAGAGGA+GGG 0.567113 3.4:-12444198 MS.gene85494:CDS
CTGGCAAGCGCTCTAAACTA+GGG 0.567492 3.4:+12444205 None:intergenic
TTTGCTTCCAGAGGGGAGTG+GGG 0.567603 3.4:-12444423 MS.gene85494:CDS
TAGAGTCATTTCCTGGTGGA+GGG 0.570150 3.4:-12444494 MS.gene85494:CDS
AAGATTGGTGAATAAGTGCA+AGG 0.572277 3.4:+12444548 None:intergenic
TCTTTGATCCTAGATTCAAA+AGG 0.575411 3.4:+12447153 None:intergenic
TTCGACAGCATCTGTAAGAT+CGG 0.576345 3.4:+12445376 None:intergenic
TAGTTTAGAGCGCTTGCCAG+AGG 0.578279 3.4:-12444202 MS.gene85494:CDS
TTGTTGTGGTAGAGGCGCAT+GGG 0.579043 3.4:-12445472 MS.gene85494:CDS
CCAGGAAATGACTCTAGTTG+TGG 0.580116 3.4:+12444501 None:intergenic
GAGAAGCAAAAGGATATGCT+CGG 0.581255 3.4:-12447105 MS.gene85494:CDS
AAAGCATGTACGTGAAGAAG+TGG 0.581481 3.4:-12447317 MS.gene85494:CDS
ATTAAGAATAATGAACTACA+AGG 0.582440 3.4:-12444274 MS.gene85494:CDS
GTGGAAGGCAACCCTCCACC+AGG 0.582744 3.4:+12444483 None:intergenic
ATCTCAACCTTCTACTAGCA+AGG 0.583102 3.4:-12447205 MS.gene85494:CDS
TTGCAAAGAAGGAAGGTGGT+TGG 0.583170 3.4:+12444887 None:intergenic
CCAAATCTTGCAAAGAAGGA+AGG 0.584179 3.4:+12444880 None:intergenic
CAAAACTATTTGCTTCCAGA+GGG 0.586582 3.4:-12444431 MS.gene85494:CDS
GAGAAGTACCAAAAGGAGGA+AGG 0.587012 3.4:-12444123 MS.gene85494:CDS
TTGCAAAGAGAATTATAGCA+AGG 0.587163 3.4:+12444609 None:intergenic
CAACATATTTATAAGATGAA+GGG 0.587270 3.4:-12445884 MS.gene85494:CDS
ACAACTCAAATGGTGGCAAG+TGG 0.588585 3.4:+12445108 None:intergenic
CAACAGATTCTCCTCTGGAA+AGG 0.591612 3.4:+12444338 None:intergenic
AACACATGTGCTAGTAATGA+TGG 0.592728 3.4:-12447072 MS.gene85494:CDS
GTAAGAGCCACCAGAGCTGG+TGG 0.597468 3.4:+12444315 None:intergenic
CAACTCAAATGGTGGCAAGT+GGG 0.597576 3.4:+12445109 None:intergenic
AAAATTTCAAGAGACCTGAA+TGG 0.598982 3.4:+12445017 None:intergenic
AACCAACTCTCCCATGGACA+TGG 0.599398 3.4:+12447512 None:intergenic
CTGAAATAGAAAGTTTCCCT+CGG 0.601478 3.4:+12445414 None:intergenic
TTTCGGCTTCTTCCAATACG+TGG 0.604911 3.4:+12447352 None:intergenic
TTACGTCATCTTGATCTGGA+AGG 0.605978 3.4:-12445560 MS.gene85494:CDS
TAAGTGCAAGGAAAATGGAA+AGG 0.612321 3.4:+12444560 None:intergenic
TCCACCAACCAACTCTCCCA+TGG 0.617111 3.4:+12447506 None:intergenic
GTTCAATAGAATTTGCTCCA+GGG 0.617722 3.4:+12444704 None:intergenic
CAGAACTCAATCTACTCCGA+GGG 0.627609 3.4:-12445430 MS.gene85494:CDS
AATTTGGAAAACTAGTGCCT+CGG 0.632509 3.4:+12445195 None:intergenic
AATTGTGGAGTCCTTTCCAG+AGG 0.638904 3.4:-12444349 MS.gene85494:CDS
TAAGGAGAAGTACCAAAAGG+AGG 0.643626 3.4:-12444127 MS.gene85494:CDS
ATGTCCATGGGAGAGTTGGT+TGG 0.647586 3.4:-12447510 MS.gene85494:CDS
AGGAGCGAGATGTCACTGAA+AGG 0.647961 3.4:-12445958 MS.gene85494:CDS
TTACGTAGTTTAATGGCACA+AGG 0.648598 3.4:-12445860 MS.gene85494:CDS
TTGGGCAATTGATTATGTGA+AGG 0.653158 3.4:+12444451 None:intergenic
ATCTAGACCTATCTCACACA+AGG 0.653562 3.4:-12445691 MS.gene85494:CDS
TTAGTATCTCTGGCTCTGAG+TGG 0.655076 3.4:-12445146 MS.gene85494:CDS
TAGGGAAACAACTCAAATGG+TGG 0.658722 3.4:+12445101 None:intergenic
AATCTTGCAAAGAAGGAAGG+TGG 0.658737 3.4:+12444883 None:intergenic
AGTCAAGTATCCTCACAGAA+GGG 0.660344 3.4:+12444073 None:intergenic
TTAAGAATAATGAACTACAA+GGG 0.666186 3.4:-12444273 MS.gene85494:CDS
CAACTAGAGTCATTTCCTGG+TGG 0.671118 3.4:-12444498 MS.gene85494:CDS
TTGACAAGTGTCATCCTACG+TGG 0.688255 3.4:-12444747 MS.gene85494:CDS
AAAACTATTTGCTTCCAGAG+GGG 0.688590 3.4:-12444430 MS.gene85494:CDS
GCAGAACTCAATCTACTCCG+AGG 0.689895 3.4:-12445431 MS.gene85494:CDS
TTTGTCACATCCCTTCTGTG+AGG 0.695520 3.4:-12444083 MS.gene85494:CDS
AAAAGGAGGAAGGAGAACGT+TGG 0.701554 3.4:-12444113 MS.gene85494:CDS
ATAGCAAGGAAAATCCAAAG+AGG 0.702925 3.4:+12444623 None:intergenic
ACATGTGCTAGTAATGATGG+TGG 0.707885 3.4:-12447069 MS.gene85494:CDS
CAATGACTTGAGTTCCACGT+AGG 0.708333 3.4:+12444733 None:intergenic
TTGACCATTGAGCACTACCG+AGG 0.710555 3.4:-12445212 MS.gene85494:CDS
GATTATGTGAAGGCTGAACA+GGG 0.720724 3.4:+12444461 None:intergenic
TATGTGAAGGCTGAACAGGG+TGG 0.803263 3.4:+12444464 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAATATCCAAAATAGAAA+GGG + chr3.4:12447420-12447439 None:intergenic 15.0%
!! TATTAATATCCAAAATAGAA+AGG + chr3.4:12447421-12447440 None:intergenic 15.0%
!! TTTCTTAAAAGTTTGAATAT+TGG - chr3.4:12446906-12446925 MS.gene85494:intron 15.0%
!!! AATATTCAAACTTTTAAGAA+AGG + chr3.4:12446907-12446926 None:intergenic 15.0%
!!! CAAATATAAAGATTTAAGAT+TGG + chr3.4:12447051-12447070 None:intergenic 15.0%
!! ACAACATATTTATAAGATGA+AGG - chr3.4:12445696-12445715 MS.gene85494:CDS 20.0%
!! ATTAAGAATAATGAACTACA+AGG - chr3.4:12447307-12447326 MS.gene85494:CDS 20.0%
!! CAACATATTTATAAGATGAA+GGG - chr3.4:12445697-12445716 MS.gene85494:CDS 20.0%
!! CAATAACATGTTAATTGAAA+GGG - chr3.4:12446299-12446318 MS.gene85494:intron 20.0%
!! CTTAAATCTTTATATTTGTG+CGG - chr3.4:12447053-12447072 MS.gene85494:intron 20.0%
!! TAAATTATACAGGTTACAAA+TGG + chr3.4:12445935-12445954 None:intergenic 20.0%
!! TAAGTTTGTAAAAATCTGAA+GGG + chr3.4:12445996-12446015 None:intergenic 20.0%
!! TAATAATTGTCCATTACTTA+AGG - chr3.4:12447436-12447455 MS.gene85494:CDS 20.0%
!! TCAATAACATGTTAATTGAA+AGG - chr3.4:12446298-12446317 MS.gene85494:intron 20.0%
!! TTAAGAATAATGAACTACAA+GGG - chr3.4:12447308-12447327 MS.gene85494:CDS 20.0%
!!! GTTTAATTTAGAGAAACTAA+AGG - chr3.4:12445054-12445073 MS.gene85494:CDS 20.0%
!!! TAATATTGGTACACTTTTAT+TGG - chr3.4:12446770-12446789 MS.gene85494:intron 20.0%
! AACCAAATAGTAACCTAAAT+AGG - chr3.4:12446346-12446365 MS.gene85494:intron 25.0%
! AAGAAAATTGTAGATAAGTG+TGG - chr3.4:12445160-12445179 MS.gene85494:CDS 25.0%
! AATCATTCAGAGAATTTAGT+TGG + chr3.4:12447190-12447209 None:intergenic 25.0%
! AGAAAAACAACGTTTAAGAA+TGG + chr3.4:12445344-12445363 None:intergenic 25.0%
! ATAGAAAGATCTTTAAGCAA+TGG + chr3.4:12446642-12446661 None:intergenic 25.0%
! ATTTAGTTAGTGTCTGAATT+CGG + chr3.4:12446089-12446108 None:intergenic 25.0%
! ATTTCAATGGCTTCTAATAT+TGG - chr3.4:12446756-12446775 MS.gene85494:intron 25.0%
! CTAAATTCTCTGAATGATTT+CGG - chr3.4:12447191-12447210 MS.gene85494:CDS 25.0%
! CTTAAAAGTTTGAATATTGG+TGG - chr3.4:12446909-12446928 MS.gene85494:intron 25.0%
! CTTTCTATTTCAAATTGTCA+TGG - chr3.4:12446513-12446532 MS.gene85494:intron 25.0%
! GAAATAGTCAATGAAATCAT+TGG + chr3.4:12444147-12444166 None:intergenic 25.0%
! GTAAGTTTGTAAAAATCTGA+AGG + chr3.4:12445997-12446016 None:intergenic 25.0%
! TAATTTACAGACACTACTAT+TGG - chr3.4:12445948-12445967 MS.gene85494:CDS 25.0%
! TAGAAAGATCTTTAAGCAAT+GGG + chr3.4:12446641-12446660 None:intergenic 25.0%
! TATCCAAATCATGAATCAAT+TGG - chr3.4:12445136-12445155 MS.gene85494:CDS 25.0%
! TCAAATCTTTCAACTCTTTA+TGG - chr3.4:12447342-12447361 MS.gene85494:CDS 25.0%
! TCTTAAACATTATGCATATG+AGG - chr3.4:12444295-12444314 MS.gene85494:CDS 25.0%
! TGTTCTCTTCAATTAAAAGA+TGG - chr3.4:12445661-12445680 MS.gene85494:CDS 25.0%
! TTTCAAAGCTAAAATGTTTG+CGG - chr3.4:12445797-12445816 MS.gene85494:CDS 25.0%
! TTTCTCTAAATTAAACTCCT+TGG + chr3.4:12445050-12445069 None:intergenic 25.0%
!! AACCTATTTAGGTTACTATT+TGG + chr3.4:12446351-12446370 None:intergenic 25.0%
!! TCAGAAACTTTTGATGTTAT+TGG - chr3.4:12444782-12444801 MS.gene85494:CDS 25.0%
!!! ATTTTTCAAATAGTCCATTC+AGG - chr3.4:12446550-12446569 MS.gene85494:intron 25.0%
!!! TTTGAAAGATAAGAAGCATT+TGG - chr3.4:12446233-12446252 MS.gene85494:intron 25.0%
!!! TTTTTTCAGCAATCAACATA+TGG - chr3.4:12445514-12445533 MS.gene85494:CDS 25.0%
AAAATTGTAGATAAGTGTGG+AGG - chr3.4:12445163-12445182 MS.gene85494:CDS 30.0%
AAAATTTCAAGAGACCTGAA+TGG + chr3.4:12446567-12446586 None:intergenic 30.0%
AAACAACGTTTAAGAATGGA+AGG + chr3.4:12445340-12445359 None:intergenic 30.0%
AAATGACCTCAAAATTGCTT+TGG + chr3.4:12444813-12444832 None:intergenic 30.0%
AAATTGTAGATAAGTGTGGA+GGG - chr3.4:12445164-12445183 MS.gene85494:CDS 30.0%
AACAACGTTTAAGAATGGAA+GGG + chr3.4:12445339-12445358 None:intergenic 30.0%
AAGAGTTGAAAGATTTGAGA+TGG + chr3.4:12447340-12447359 None:intergenic 30.0%
AGATATTGGAAACTGATATG+TGG - chr3.4:12445254-12445273 MS.gene85494:CDS 30.0%
CAAGAAATATTTGCTTGTTC+TGG - chr3.4:12444898-12444917 MS.gene85494:CDS 30.0%
GTAGTGTCTGTAAATTATAC+AGG + chr3.4:12445945-12445964 None:intergenic 30.0%
TATTGTTCCATATTTCCCAA+AGG - chr3.4:12445364-12445383 MS.gene85494:CDS 30.0%
TCTTTCATCATTCTTTCAAG+TGG - chr3.4:12444103-12444122 MS.gene85494:CDS 30.0%
TCTTTGATCCTAGATTCAAA+AGG + chr3.4:12444431-12444450 None:intergenic 30.0%
TGAAATTCTTGAGAAGCAAA+AGG - chr3.4:12444466-12444485 MS.gene85494:CDS 30.0%
TTCAAATTGTCATGGAATAG+AGG - chr3.4:12446521-12446540 MS.gene85494:intron 30.0%
TTGCAAAGAGAATTATAGCA+AGG + chr3.4:12446975-12446994 None:intergenic 30.0%
TTTGTCCAATTTAGTATCTC+TGG - chr3.4:12446425-12446444 MS.gene85494:intron 30.0%
! AGAATTTTCAACATAGAGCT+TGG - chr3.4:12444750-12444769 MS.gene85494:CDS 30.0%
! ATTTTGTGAACATGTCCAAT+TGG - chr3.4:12446589-12446608 MS.gene85494:intron 30.0%
! CTTTGCAAACTTTTTGTAAG+TGG - chr3.4:12446987-12447006 MS.gene85494:intron 30.0%
! GAATTTTCAACATAGAGCTT+GGG - chr3.4:12444751-12444770 MS.gene85494:CDS 30.0%
! TATTGGTACACTTTTATTGG+CGG - chr3.4:12446773-12446792 MS.gene85494:intron 30.0%
! TCACTAATCCTTTTGAATCT+AGG - chr3.4:12444420-12444439 MS.gene85494:CDS 30.0%
! TTGCCAATTGATTCATGATT+TGG + chr3.4:12445142-12445161 None:intergenic 30.0%
!! AACTAAATTTGTTGTGGTAG+AGG - chr3.4:12446101-12446120 MS.gene85494:intron 30.0%
!! ACGTGAATGGATTAAGATAT+TGG - chr3.4:12445240-12445259 MS.gene85494:CDS 30.0%
!! CATGTTATTGATTTCTCTAG+TGG + chr3.4:12446289-12446308 None:intergenic 30.0%
!! GACACTAACTAAATTTGTTG+TGG - chr3.4:12446095-12446114 MS.gene85494:intron 30.0%
!!! GGTAGAGCTTTTTTCAATTT+GGG + chr3.4:12446675-12446694 None:intergenic 30.0%
AAAACTATTTGCTTCCAGAG+GGG - chr3.4:12447151-12447170 MS.gene85494:CDS 35.0%
AACACATGTGCTAGTAATGA+TGG - chr3.4:12444509-12444528 MS.gene85494:CDS 35.0%
AACTAAAGGAGAGTGAATGT+TGG - chr3.4:12445068-12445087 MS.gene85494:CDS 35.0%
AACTTGTGTACAATGACCAA+AGG - chr3.4:12444720-12444739 MS.gene85494:CDS 35.0%
AAGAACATGCCAAAAGAGAT+AGG - chr3.4:12446054-12446073 MS.gene85494:intron 35.0%
AAGATTGCCAACTACATCTT+TGG - chr3.4:12444556-12444575 MS.gene85494:CDS 35.0%
AAGATTGGTGAATAAGTGCA+AGG + chr3.4:12447036-12447055 None:intergenic 35.0%
AAGGAATGGTTATGTGTTGA+AGG - chr3.4:12446612-12446631 MS.gene85494:intron 35.0%
AATAGAAAGCCTCTTCAGAT+AGG + chr3.4:12446502-12446521 None:intergenic 35.0%
AATGTTGGAGTATGTTTGTG+AGG - chr3.4:12445083-12445102 MS.gene85494:CDS 35.0%
AATTTGGAAAACTAGTGCCT+CGG + chr3.4:12446389-12446408 None:intergenic 35.0%
ACATAACCATTCCTTCCAAT+TGG + chr3.4:12446607-12446626 None:intergenic 35.0%
AGAACATGCCAAAAGAGATA+GGG - chr3.4:12446055-12446074 MS.gene85494:intron 35.0%
AGATAGGGAAACAACTCAAA+TGG + chr3.4:12446486-12446505 None:intergenic 35.0%
ATAGAAAGCCTCTTCAGATA+GGG + chr3.4:12446501-12446520 None:intergenic 35.0%
ATAGCAAGGAAAATCCAAAG+AGG + chr3.4:12446961-12446980 None:intergenic 35.0%
ATCCAAAATAGAAAGGGAGT+TGG + chr3.4:12447414-12447433 None:intergenic 35.0%
ATGACACTTGTCAATTTGGA+AGG + chr3.4:12446828-12446847 None:intergenic 35.0%
ATTGCCAAATCTTGCAAAGA+AGG + chr3.4:12446708-12446727 None:intergenic 35.0%
CAAAACTATTTGCTTCCAGA+GGG - chr3.4:12447150-12447169 MS.gene85494:CDS 35.0%
CAATGATCTAGCAAAATCAG+TGG - chr3.4:12445567-12445586 MS.gene85494:CDS 35.0%
CAATTCTATCAACCACGTAT+TGG - chr3.4:12444217-12444236 MS.gene85494:CDS 35.0%
CAATTTACGTCATCTTGATC+TGG - chr3.4:12446017-12446036 MS.gene85494:intron 35.0%
CAGATCAAGATGACGTAAAT+TGG + chr3.4:12446019-12446038 None:intergenic 35.0%
CTAATTCACGCTTGTGAAAA+AGG + chr3.4:12445393-12445412 None:intergenic 35.0%
CTCTAAATTAAACTCCTTGG+TGG + chr3.4:12445047-12445066 None:intergenic 35.0%
CTGAAATAGAAAGTTTCCCT+CGG + chr3.4:12446170-12446189 None:intergenic 35.0%
GAAAATTCTCCTTGATCCTT+TGG + chr3.4:12444739-12444758 None:intergenic 35.0%
GAAAATTCTCTCAACGTGAA+TGG - chr3.4:12445227-12445246 MS.gene85494:CDS 35.0%
GAAACTTTCTATTTCAGGGT+TGG - chr3.4:12446173-12446192 MS.gene85494:intron 35.0%
GAAGGGATTACGTAGTTTAA+TGG - chr3.4:12445714-12445733 MS.gene85494:CDS 35.0%
GAGGGAAACTTTCTATTTCA+GGG - chr3.4:12446169-12446188 MS.gene85494:intron 35.0%
GCTTTGGTATTGCTTCATTT+CGG + chr3.4:12444249-12444268 None:intergenic 35.0%
GTGAATAAGTGCAAGGAAAA+TGG + chr3.4:12447029-12447048 None:intergenic 35.0%
TAAGTGCAAGGAAAATGGAA+AGG + chr3.4:12447024-12447043 None:intergenic 35.0%
TACAGGTTACAAATGGAATC+AGG + chr3.4:12445928-12445947 None:intergenic 35.0%
TAGGATGACACTTGTCAATT+TGG + chr3.4:12446832-12446851 None:intergenic 35.0%
TATCTCACACAAGGATTGAA+AGG - chr3.4:12445899-12445918 MS.gene85494:CDS 35.0%
TCATTTCACACTTCAGAAGA+TGG - chr3.4:12444827-12444846 MS.gene85494:CDS 35.0%
TCCAAAATAGAAAGGGAGTT+GGG + chr3.4:12447413-12447432 None:intergenic 35.0%
TCGATAGTGCAAATCTAGAA+TGG - chr3.4:12446934-12446953 MS.gene85494:intron 35.0%
TGGTACTTCTCCTTAAGTAA+TGG + chr3.4:12447449-12447468 None:intergenic 35.0%
TTACGTAGTTTAATGGCACA+AGG - chr3.4:12445721-12445740 MS.gene85494:CDS 35.0%
TTACTACTTCCCTTATGTCA+TGG - chr3.4:12444959-12444978 MS.gene85494:CDS 35.0%
TTGGGCAATTGATTATGTGA+AGG + chr3.4:12447133-12447152 None:intergenic 35.0%
TTGTGAAAAAGGTGACCTTT+GGG + chr3.4:12445382-12445401 None:intergenic 35.0%
TTTCAATCCTTGTGTGAGAT+AGG + chr3.4:12445900-12445919 None:intergenic 35.0%
! AAATCTAGAATGGTCCTCTT+TGG - chr3.4:12446944-12446963 MS.gene85494:intron 35.0%
! AATTACTGATTGCCAAGAGT+TGG - chr3.4:12446725-12446744 MS.gene85494:intron 35.0%
! AGAATTTTGCTTGCAGATAG+AGG - chr3.4:12445594-12445613 MS.gene85494:CDS 35.0%
! ATTGGTACACTTTTATTGGC+GGG - chr3.4:12446774-12446793 MS.gene85494:intron 35.0%
! ATTGTACACAAGTTGAGCAA+GGG + chr3.4:12444714-12444733 None:intergenic 35.0%
! GACTTACCAAAGCAATTTTG+AGG - chr3.4:12444804-12444823 MS.gene85494:CDS 35.0%
! GCAAACTTTTTGTAAGTGGA+TGG - chr3.4:12446991-12447010 MS.gene85494:intron 35.0%
! GTTCAATAGAATTTGCTCCA+GGG + chr3.4:12446880-12446899 None:intergenic 35.0%
! TAGTGACGAGTTTGAAATTG+TGG - chr3.4:12447217-12447236 MS.gene85494:CDS 35.0%
! TGACATCAAGTTTGCTTCTA+CGG + chr3.4:12444169-12444188 None:intergenic 35.0%
! TGTTCAATAGAATTTGCTCC+AGG + chr3.4:12446881-12446900 None:intergenic 35.0%
!! ACTTAAGGAGAAGTACCAAA+AGG - chr3.4:12447451-12447470 MS.gene85494:CDS 35.0%
!! CTAGTTTTCCAAATTGGCTT+GGG - chr3.4:12446394-12446413 MS.gene85494:intron 35.0%
!! CTCTGGAAGCAAATAGTTTT+GGG + chr3.4:12447151-12447170 None:intergenic 35.0%
!! TTTAGCTTCCCTATCTCTTT+TGG + chr3.4:12446066-12446085 None:intergenic 35.0%
!!! ACTAGTTTTCCAAATTGGCT+TGG - chr3.4:12446393-12446412 MS.gene85494:intron 35.0%
!!! GGGTAGAGCTTTTTTCAATT+TGG + chr3.4:12446676-12446695 None:intergenic 35.0%
!!! TAGTTTTCCAAATTGGCTTG+GGG - chr3.4:12446395-12446414 MS.gene85494:intron 35.0%
!!! TCTCATCATCTAGCTTTTGA+AGG + chr3.4:12445846-12445865 None:intergenic 35.0%
AAAGCATGTACGTGAAGAAG+TGG - chr3.4:12444264-12444283 MS.gene85494:CDS 40.0%
AAATTGAAGCCTCCAACTCT+TGG + chr3.4:12446740-12446759 None:intergenic 40.0%
AATCTTGCAAAGAAGGAAGG+TGG + chr3.4:12446701-12446720 None:intergenic 40.0%
ACATGTCCAATTGGAAGGAA+TGG - chr3.4:12446598-12446617 MS.gene85494:intron 40.0%
ACATGTGCTAGTAATGATGG+TGG - chr3.4:12444512-12444531 MS.gene85494:CDS 40.0%
ACTTCTTCACGTACATGCTT+TGG + chr3.4:12444265-12444284 None:intergenic 40.0%
AGCGTGAATTAGTCAAGCTT+TGG - chr3.4:12445401-12445420 MS.gene85494:CDS 40.0%
AGTCAAGTATCCTCACAGAA+GGG + chr3.4:12447511-12447530 None:intergenic 40.0%
ATATGGTAGAGATGGTGACA+AGG - chr3.4:12444595-12444614 MS.gene85494:CDS 40.0%
ATCTAGACCTATCTCACACA+AGG - chr3.4:12445890-12445909 MS.gene85494:CDS 40.0%
ATCTATCATGAAGTCCACCA+AGG - chr3.4:12445030-12445049 MS.gene85494:CDS 40.0%
ATCTCAACCTTCTACTAGCA+AGG - chr3.4:12444376-12444395 MS.gene85494:CDS 40.0%
ATTGCCAACTACATCTTTGG+TGG - chr3.4:12444559-12444578 MS.gene85494:CDS 40.0%
CAGAGCCAGAGATACTAAAT+TGG + chr3.4:12446433-12446452 None:intergenic 40.0%
CCAAAACTATTTGCTTCCAG+AGG - chr3.4:12447149-12447168 MS.gene85494:CDS 40.0%
CCAAATCTTGCAAAGAAGGA+AGG + chr3.4:12446704-12446723 None:intergenic 40.0%
CCAGTAGATCCATGACATAA+GGG + chr3.4:12444971-12444990 None:intergenic 40.0%
CCTTCCTTCTTTGCAAGATT+TGG - chr3.4:12446701-12446720 MS.gene85494:intron 40.0%
CCTTTAGCTGTGAAAACGTT+GGG - chr3.4:12445190-12445209 MS.gene85494:CDS 40.0%
CGAGGGAAACTTTCTATTTC+AGG - chr3.4:12446168-12446187 MS.gene85494:intron 40.0%
CTCAATACCTTGCTAGTAGA+AGG + chr3.4:12444386-12444405 None:intergenic 40.0%
CTTGCAGATAGAGGATGATA+AGG - chr3.4:12445603-12445622 MS.gene85494:CDS 40.0%
CTTGTGAAAAAGGTGACCTT+TGG + chr3.4:12445383-12445402 None:intergenic 40.0%
GAGAAGCAAAAGGATATGCT+CGG - chr3.4:12444476-12444495 MS.gene85494:CDS 40.0%
GATCTAGCAAAATCAGTGGT+AGG - chr3.4:12445571-12445590 MS.gene85494:CDS 40.0%
GATTATGTGAAGGCTGAACA+GGG + chr3.4:12447123-12447142 None:intergenic 40.0%
GCTCAATGGTCAACCTATTT+AGG + chr3.4:12446362-12446381 None:intergenic 40.0%
GTACAATGACCAAAGGATCA+AGG - chr3.4:12444727-12444746 MS.gene85494:CDS 40.0%
GTGGATGAATCGAGCATATA+TGG - chr3.4:12444578-12444597 MS.gene85494:CDS 40.0%
GTTGGAGGCTTCAATTTCAA+TGG - chr3.4:12446743-12446762 MS.gene85494:intron 40.0%
TAAGAATGGAAGGGAGATGA+TGG + chr3.4:12445330-12445349 None:intergenic 40.0%
TAGGGAAACAACTCAAATGG+TGG + chr3.4:12446483-12446502 None:intergenic 40.0%
TCATCCACCAAAGATGTAGT+TGG + chr3.4:12444566-12444585 None:intergenic 40.0%
TCGAGCATATATGGTAGAGA+TGG - chr3.4:12444587-12444606 MS.gene85494:CDS 40.0%
TGAAAGGGAAATGTCTGTCT+TGG - chr3.4:12446314-12446333 MS.gene85494:intron 40.0%
TGATTATGTGAAGGCTGAAC+AGG + chr3.4:12447124-12447143 None:intergenic 40.0%
TGGGTCTGATATTAAGGAGT+TGG - chr3.4:12446128-12446147 MS.gene85494:intron 40.0%
TGTGAACATGTCCAATTGGA+AGG - chr3.4:12446593-12446612 MS.gene85494:intron 40.0%
TTACGTCATCTTGATCTGGA+AGG - chr3.4:12446021-12446040 MS.gene85494:intron 40.0%
TTCGACAGCATCTGTAAGAT+CGG + chr3.4:12446208-12446227 None:intergenic 40.0%
TTGCAATCTCATCTAACAGC+TGG + chr3.4:12444325-12444344 None:intergenic 40.0%
! AAGGTGACCTTTGGGAAATA+TGG + chr3.4:12445374-12445393 None:intergenic 40.0%
! ACCCAACTCCCTTTCTATTT+TGG - chr3.4:12447409-12447428 MS.gene85494:CDS 40.0%
! AGACCAACTATGCTGACTAT+CGG + chr3.4:12444671-12444690 None:intergenic 40.0%
! AGTTGTTTCCCTATCTGAAG+AGG - chr3.4:12446490-12446509 MS.gene85494:intron 40.0%
! AGTTTGCTTTCAGACGTTGA+TGG - chr3.4:12444632-12444651 MS.gene85494:CDS 40.0%
! ATAGTCAGCATAGTTGGTCT+TGG - chr3.4:12444671-12444690 MS.gene85494:CDS 40.0%
! CATTGTACACAAGTTGAGCA+AGG + chr3.4:12444715-12444734 None:intergenic 40.0%
! GACAAAAGTGCAGAAGAGTT+GGG - chr3.4:12445457-12445476 MS.gene85494:CDS 40.0%
! TGACAAAAGTGCAGAAGAGT+TGG - chr3.4:12445456-12445475 MS.gene85494:CDS 40.0%
! TTCTGGATGATGTCTGGAAT+GGG - chr3.4:12444915-12444934 MS.gene85494:CDS 40.0%
!! ATAGTTGGTCTTGGTGGAAT+GGG - chr3.4:12444680-12444699 MS.gene85494:CDS 40.0%
!! CCTCTGGAAGCAAATAGTTT+TGG + chr3.4:12447152-12447171 None:intergenic 40.0%
!! GAAGGTTTGTTGAAGTGTTG+TGG - chr3.4:12445430-12445449 MS.gene85494:CDS 40.0%
!! GTAATGATGGTGGAGTTAGT+TGG - chr3.4:12444522-12444541 MS.gene85494:CDS 40.0%
!! GTATTGTGTTGCTTATCTCC+TGG + chr3.4:12445765-12445784 None:intergenic 40.0%
!! TAAGGAGAAGTACCAAAAGG+AGG - chr3.4:12447454-12447473 MS.gene85494:CDS 40.0%
!!! AGTTTTCCAAATTGGCTTGG+GGG - chr3.4:12446396-12446415 MS.gene85494:intron 40.0%
!!! GAGGCACTAGTTTTCCAAAT+TGG - chr3.4:12446388-12446407 MS.gene85494:intron 40.0%
AAAAGGAGGAAGGAGAACGT+TGG - chr3.4:12447468-12447487 MS.gene85494:CDS 45.0%
AAGGGAAATGTCTGTCTTGG+AGG - chr3.4:12446317-12446336 MS.gene85494:intron 45.0%
AATTGTGGAGTCCTTTCCAG+AGG - chr3.4:12447232-12447251 MS.gene85494:CDS 45.0%
ACAACTCAAATGGTGGCAAG+TGG + chr3.4:12446476-12446495 None:intergenic 45.0%
ACTCCAACATCAATTGCAGC+AGG - chr3.4:12444865-12444884 MS.gene85494:CDS 45.0%
CAACTAGAGTCATTTCCTGG+TGG - chr3.4:12447083-12447102 MS.gene85494:CDS 45.0%
CAACTCAAATGGTGGCAAGT+GGG + chr3.4:12446475-12446494 None:intergenic 45.0%
CAATGACTTGAGTTCCACGT+AGG + chr3.4:12446851-12446870 None:intergenic 45.0%
CAATTGCAGCAGGGACTAAT+AGG - chr3.4:12444875-12444894 MS.gene85494:CDS 45.0%
CAGAACTCAATCTACTCCGA+GGG - chr3.4:12446151-12446170 MS.gene85494:intron 45.0%
CAGTCAAGTATCCTCACAGA+AGG + chr3.4:12447512-12447531 None:intergenic 45.0%
CCACAACTAGAGTCATTTCC+TGG - chr3.4:12447080-12447099 MS.gene85494:CDS 45.0%
CCAGGAAATGACTCTAGTTG+TGG + chr3.4:12447083-12447102 None:intergenic 45.0%
CCCTTATGTCATGGATCTAC+TGG - chr3.4:12444968-12444987 MS.gene85494:CDS 45.0%
CTCCAACATCAATTGCAGCA+GGG - chr3.4:12444866-12444885 MS.gene85494:CDS 45.0%
CTGAAAGGACACGTCACATT+TGG - chr3.4:12445638-12445657 MS.gene85494:CDS 45.0%
GAATGGGAGTGAGGAATGTT+GGG - chr3.4:12444931-12444950 MS.gene85494:CDS 45.0%
GCCAGTAGATCCATGACATA+AGG + chr3.4:12444972-12444991 None:intergenic 45.0%
GCCTTTAGCTGTGAAAACGT+TGG - chr3.4:12445189-12445208 MS.gene85494:CDS 45.0%
GTTCCGATAGTCAGCATAGT+TGG - chr3.4:12444665-12444684 MS.gene85494:CDS 45.0%
TAGAGTCATTTCCTGGTGGA+GGG - chr3.4:12447087-12447106 MS.gene85494:CDS 45.0%
TCAAGTCATTGCATCTTCCC+TGG - chr3.4:12446860-12446879 MS.gene85494:intron 45.0%
TCAGCTTTCAGTCTCTTCAG+TGG + chr3.4:12444356-12444375 None:intergenic 45.0%
TCTGAAGGGAGTTCAGTCAA+TGG + chr3.4:12445982-12446001 None:intergenic 45.0%
TGCAAAGAAGGAAGGTGGTT+GGG + chr3.4:12446696-12446715 None:intergenic 45.0%
TTGACAAGTGTCATCCTACG+TGG - chr3.4:12446834-12446853 MS.gene85494:intron 45.0%
TTGCAAAGAAGGAAGGTGGT+TGG + chr3.4:12446697-12446716 None:intergenic 45.0%
TTTCGGCTTCTTCCAATACG+TGG + chr3.4:12444232-12444251 None:intergenic 45.0%
TTTGTCACATCCCTTCTGTG+AGG - chr3.4:12447498-12447517 MS.gene85494:CDS 45.0%
! AACGTTCTCCTTCCTCCTTT+TGG + chr3.4:12447469-12447488 None:intergenic 45.0%
! CAACAGATTCTCCTCTGGAA+AGG + chr3.4:12447246-12447265 None:intergenic 45.0%
! CCCAACGTTTTCACAGCTAA+AGG + chr3.4:12445193-12445212 None:intergenic 45.0%
! CTATGCTGACTATCGGAACT+TGG + chr3.4:12444664-12444683 None:intergenic 45.0%
! GTTCTGGATGATGTCTGGAA+TGG - chr3.4:12444914-12444933 MS.gene85494:CDS 45.0%
! TACTGATTGCCAAGAGTTGG+AGG - chr3.4:12446728-12446747 MS.gene85494:intron 45.0%
! TGCTTGTTCTGGATGATGTC+TGG - chr3.4:12444909-12444928 MS.gene85494:CDS 45.0%
! TTAATGGCACAAGGCACCTT+TGG - chr3.4:12445730-12445749 MS.gene85494:CDS 45.0%
! TTGCTTTCAGACGTTGATGG+TGG - chr3.4:12444635-12444654 MS.gene85494:CDS 45.0%
! TTTGTGAGGCATGCTTTTCG+CGG - chr3.4:12445097-12445116 MS.gene85494:CDS 45.0%
!! CATAGTTGGTCTTGGTGGAA+TGG - chr3.4:12444679-12444698 MS.gene85494:CDS 45.0%
!! GAGAAGTACCAAAAGGAGGA+AGG - chr3.4:12447458-12447477 MS.gene85494:CDS 45.0%
!! GTCAAGCTTTGGATAGCAGA+AGG - chr3.4:12445412-12445431 MS.gene85494:CDS 45.0%
!! TTAGTATCTCTGGCTCTGAG+TGG - chr3.4:12446435-12446454 MS.gene85494:intron 45.0%
AGGAGCGAGATGTCACTGAA+AGG - chr3.4:12445623-12445642 MS.gene85494:CDS 50.0%
ATTTGCTTCCAGAGGGGAGT+GGG - chr3.4:12447157-12447176 MS.gene85494:CDS 50.0%
CTAGAGTCATTTCCTGGTGG+AGG - chr3.4:12447086-12447105 MS.gene85494:CDS 50.0%
GCAGAACTCAATCTACTCCG+AGG - chr3.4:12446150-12446169 MS.gene85494:intron 50.0%
GGAATGGGAGTGAGGAATGT+TGG - chr3.4:12444930-12444949 MS.gene85494:CDS 50.0%
GGCGCATGGGTCTGATATTA+AGG - chr3.4:12446122-12446141 MS.gene85494:intron 50.0%
GTCCCTGCTGCAATTGATGT+TGG + chr3.4:12444871-12444890 None:intergenic 50.0%
TATGTGAAGGCTGAACAGGG+TGG + chr3.4:12447120-12447139 None:intergenic 50.0%
TATTTGCTTCCAGAGGGGAG+TGG - chr3.4:12447156-12447175 MS.gene85494:CDS 50.0%
TGACAACCCCCAAGCCAATT+TGG + chr3.4:12446405-12446424 None:intergenic 50.0%
TGGTAGAGATGGTGACAAGG+AGG - chr3.4:12444598-12444617 MS.gene85494:CDS 50.0%
TTGACCATTGAGCACTACCG+AGG - chr3.4:12446369-12446388 MS.gene85494:intron 50.0%
! ATGTCCATGGGAGAGTTGGT+TGG - chr3.4:12444071-12444090 MS.gene85494:CDS 50.0%
! CTGGCAAGCGCTCTAAACTA+GGG + chr3.4:12447379-12447398 None:intergenic 50.0%
! GTACACAAGTTGAGCAAGGG+TGG + chr3.4:12444711-12444730 None:intergenic 50.0%
! TAGTTTAGAGCGCTTGCCAG+AGG - chr3.4:12447379-12447398 MS.gene85494:CDS 50.0%
! TCTGGCAAGCGCTCTAAACT+AGG + chr3.4:12447380-12447399 None:intergenic 50.0%
! TGATGTCTGGAATGGGAGTG+AGG - chr3.4:12444922-12444941 MS.gene85494:CDS 50.0%
! TTGTTGTGGTAGAGGCGCAT+GGG - chr3.4:12446109-12446128 MS.gene85494:intron 50.0%
! TTTGTTGTGGTAGAGGCGCA+TGG - chr3.4:12446108-12446127 MS.gene85494:intron 50.0%
!! GTCAGCATAGTTGGTCTTGG+TGG - chr3.4:12444674-12444693 MS.gene85494:CDS 50.0%
AGAGTAAGAGCCACCAGAGC+TGG + chr3.4:12447272-12447291 None:intergenic 55.0%
AGTGCCTCGGTAGTGCTCAA+TGG + chr3.4:12446376-12446395 None:intergenic 55.0%
GAATCTGTTGCCACCAGCTC+TGG - chr3.4:12447256-12447275 MS.gene85494:CDS 55.0%
GGTGGCAACAGATTCTCCTC+TGG + chr3.4:12447251-12447270 None:intergenic 55.0%
TCCACCAACCAACTCTCCCA+TGG + chr3.4:12444078-12444097 None:intergenic 55.0%
TGAAGGCTGAACAGGGTGGA+AGG + chr3.4:12447116-12447135 None:intergenic 55.0%
TTTGCTTCCAGAGGGGAGTG+GGG - chr3.4:12447158-12447177 MS.gene85494:CDS 55.0%
! ATGGCACAAGGCACCTTTGG+TGG - chr3.4:12445733-12445752 MS.gene85494:CDS 55.0%
! TCCATGGGAGAGTTGGTTGG+TGG - chr3.4:12444074-12444093 MS.gene85494:CDS 55.0%
! TGAGGCATGCTTTTCGCGGT+AGG - chr3.4:12445101-12445120 MS.gene85494:CDS 55.0%
! TTAGAGCGCTTGCCAGAGGA+GGG - chr3.4:12447383-12447402 MS.gene85494:CDS 55.0%
! TTTAGAGCGCTTGCCAGAGG+AGG - chr3.4:12447382-12447401 MS.gene85494:CDS 55.0%
CTCCTGGTGTCTGCCACCAA+AGG + chr3.4:12445749-12445768 None:intergenic 60.0%
GAACAAACCCCACTCCCCTC+TGG + chr3.4:12447168-12447187 None:intergenic 60.0%
GAGTTGGGTAGACCCTCCTC+TGG + chr3.4:12447398-12447417 None:intergenic 60.0%
GTAAGAGCCACCAGAGCTGG+TGG + chr3.4:12447269-12447288 None:intergenic 60.0%
! CACCTTTGGTGGCAGACACC+AGG - chr3.4:12445744-12445763 MS.gene85494:CDS 60.0%
! TCTGTTGCCACCAGCTCTGG+TGG - chr3.4:12447259-12447278 MS.gene85494:CDS 60.0%
GTGGAAGGCAACCCTCCACC+AGG + chr3.4:12447101-12447120 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr3.4 gene 12444071 12447532 12444071 ID=MS.gene85494
chr3.4 mRNA 12444071 12447532 12444071 ID=MS.gene85494.t1;Parent=MS.gene85494
chr3.4 exon 12447068 12447532 12447068 ID=MS.gene85494.t1.exon1;Parent=MS.gene85494.t1
chr3.4 CDS 12447068 12447532 12447068 ID=cds.MS.gene85494.t1;Parent=MS.gene85494.t1
chr3.4 exon 12444071 12445993 12444071 ID=MS.gene85494.t1.exon2;Parent=MS.gene85494.t1
chr3.4 CDS 12444071 12445993 12444071 ID=cds.MS.gene85494.t1;Parent=MS.gene85494.t1
Gene Sequence

>MS.gene85494

ATGTCCATGGGAGAGTTGGTTGGTGGAGCGTTTCTTTCATCATTCTTTCAAGTGGCTCTTGAGAAATTGTCTTCCAATGATTTCATTGACTATTTCCGTAGAAGCAAACTTGATGTCAATCTGATAAAGAAACTTCTAATAACATTCAATTCTATCAACCACGTATTGGAAGAAGCCGAAATGAAGCAATACCAAAGCATGTACGTGAAGAAGTGGCTTGATGATCTTAAACATTATGCATATGAGGTTGACCAGCTGTTAGATGAGATTGCAACTGATGCACCACTGAAGAGACTGAAAGCTGAATCTCAACCTTCTACTAGCAAGGTATTGAGTTTCTTTTCATCTTTCACTAATCCTTTTGAATCTAGGATCAAAGAATTGCTAGAGAAGCTTGAAATTCTTGAGAAGCAAAAGGATATGCTCGGATTGAAACAAAACACATGTGCTAGTAATGATGGTGGAGTTAGTTGGAAACTATCAGAAAGATTGCCAACTACATCTTTGGTGGATGAATCGAGCATATATGGTAGAGATGGTGACAAGGAGGAGATAATCAAAAGTTTGCTTTCAGACGTTGATGGTGGAAACCAAGTTCCGATAGTCAGCATAGTTGGTCTTGGTGGAATGGGTAAGACCACCCTTGCTCAACTTGTGTACAATGACCAAAGGATCAAGGAGAATTTTCAACATAGAGCTTGGGTCTATGTTTCAGAAACTTTTGATGTTATTGGACTTACCAAAGCAATTTTGAGGTCATTTCACACTTCAGAAGATGGTGAAGACTTGAATCTACTCCAACATCAATTGCAGCAGGGACTAATAGGCAAGAAATATTTGCTTGTTCTGGATGATGTCTGGAATGGGAGTGAGGAATGTTGGGAGCGCTTACTACTTCCCTTATGTCATGGATCTACTGGCAGTAAAATTATTGTGACAACACGTGACATGAAAGTAGCATCTATCATGAAGTCCACCAAGGAGTTTAATTTAGAGAAACTAAAGGAGAGTGAATGTTGGAGTATGTTTGTGAGGCATGCTTTTCGCGGTAGGAATGCAAGTGAATATCCAAATCATGAATCAATTGGCAAGAAAATTGTAGATAAGTGTGGAGGGTTGCCTTTAGCTGTGAAAACGTTGGGAAATCTCTTGCAAAGAAAATTCTCTCAACGTGAATGGATTAAGATATTGGAAACTGATATGTGGCATTTATCAAAGAGTGACAATAAAATTAATTCAGTACTGAGATTGAGTTACCATCATCTCCCTTCCATTCTTAAACGTTGTTTTTCTTATTGTTCCATATTTCCCAAAGGTCACCTTTTTCACAAGCGTGAATTAGTCAAGCTTTGGATAGCAGAAGGTTTGTTGAAGTGTTGTGGAACTGACAAAAGTGCAGAAGAGTTGGGTAATGATTTATTTGTTGATCTAGAATCAATTTCATTTTTTCAGCAATCAACATATGGTCGTAATAGTTTCGAAATGCATGATCTTGTCAATGATCTAGCAAAATCAGTGGTAGGAGAATTTTGCTTGCAGATAGAGGATGATAAGGAGCGAGATGTCACTGAAAGGACACGTCACATTTGGTGTTCTCTTCAATTAAAAGATGGTGATAAAATGACACAACATATTTATAAGATGAAGGGATTACGTAGTTTAATGGCACAAGGCACCTTTGGTGGCAGACACCAGGAGATAAGCAACACAATACAACAAGATTTGTTTTCAAAGCTAAAATGTTTGCGGATGTTATCATTGAAACGTTGTAACCTTCAAAAGCTAGATGATGAGATAAGCAATTTAAAGATTTTGCGTTATCTAGACCTATCTCACACAAGGATTGAAAGGTTACCTGATTCCATTTGTAACCTGTATAATTTACAGACACTACTATTGGAATATTGTCCATTGACTGAACTCCCTTCAGATTTTTACAAACTTACCAATTTACGTCATCTTGATCTGGAAGGCACTTGTATAAAGAACATGCCAAAAGAGATAGGGAAGCTAAACCGAATTCAGACACTAACTAAATTTGTTGTGGTAGAGGCGCATGGGTCTGATATTAAGGAGTTGGCAGAACTCAATCTACTCCGAGGGAAACTTTCTATTTCAGGGTTGGAAAATGTCACCGATCTTACAGATGCTGTCGAAGCAAATTTGAAAGATAAGAAGCATTTGGAAGAATTACGTCTAATATACAGTGCATGTGCCACTAGAGAAATCAATAACATGTTAATTGAAAGGGAAATGTCTGTCTTGGAGGCTCTTCAACCAAATAGTAACCTAAATAGGTTGACCATTGAGCACTACCGAGGCACTAGTTTTCCAAATTGGCTTGGGGGTTGTCATTTGTCCAATTTAGTATCTCTGGCTCTGAGTGGATGTGAACTTTGTTCCCACTTGCCACCATTTGAGTTGTTTCCCTATCTGAAGAGGCTTTCTATTTCAAATTGTCATGGAATAGAGGTCATTGATTTTTCAAATAGTCCATTCAGGTCTCTTGAAATTTTGCATTTTGTGAACATGTCCAATTGGAAGGAATGGTTATGTGTTGAAGGTTTCCCATTGCTTAAAGATCTTTCTATACAAAGTTGTCCCAAATTGAAAAAAGCTCTACCCAACCACCTTCCTTCTTTGCAAGATTTGGCAATTACTGATTGCCAAGAGTTGGAGGCTTCAATTTCAATGGCTTCTAATATTGGTACACTTTTATTGGCGGGATGTGAAAACATTTTGATAAATGATCTGCCTTCCAAATTGACAAGTGTCATCCTACGTGGAACTCAAGTCATTGCATCTTCCCTGGAGCAAATTCTATTGAACAATGCCTTTCTTAAAAGTTTGAATATTGGTGGCTTCGATAGTGCAAATCTAGAATGGTCCTCTTTGGATTTTCCTTGCTATAATTCTCTTTGCAAACTTTTTGTAAGTGGATGGCACTCTTCCTTTCCATTTTCCTTGCACTTATTCACCAATCTTAAATCTTTATATTTGTGCGGTTGTCCACAACTAGAGTCATTTCCTGGTGGAGGGTTGCCTTCCACCCTGTTCAGCCTTCACATAATCAATTGCCCAAAACTATTTGCTTCCAGAGGGGAGTGGGGTTTGTTCCAACTAAATTCTCTGAATGATTTCGGTGTTAGTGACGAGTTTGAAATTGTGGAGTCCTTTCCAGAGGAGAATCTGTTGCCACCAGCTCTGGTGGCTCTTACTCTGACTAATTGTTCAAAATTAAGAATAATGAACTACAAGGGTCTTCTCCATCTCAAATCTTTCAACTCTTTATGGATTGAACGCTGCCCTAGTTTAGAGCGCTTGCCAGAGGAGGGTCTACCCAACTCCCTTTCTATTTTGGATATTAATAATTGTCCATTACTTAAGGAGAAGTACCAAAAGGAGGAAGGAGAACGTTGGCATACAATTTGTCACATCCCTTCTGTGAGGATACTTGACTGA

Protein sequence

>MS.gene85494.t1

MSMGELVGGAFLSSFFQVALEKLSSNDFIDYFRRSKLDVNLIKKLLITFNSINHVLEEAEMKQYQSMYVKKWLDDLKHYAYEVDQLLDEIATDAPLKRLKAESQPSTSKVLSFFSSFTNPFESRIKELLEKLEILEKQKDMLGLKQNTCASNDGGIEDDKERDVTERTRHIWCSLQLKDGDKMTQHIYKMKGLRSLMAQGTFGGRHQEISNTIQQDLFSKLKCLRMLSLKRCNLQKLDDEISNLKILRYLDLSHTRIERLPDSICNLYNLQTLLLEYCPLTELPSDFYKLTNLRHLDLEGTCIKNMPKEIGKLNRIQTLTKFVVVEAHGSDIKELAELNLLRGKLSISGLENVTDLTDAVEANLKDKKHLEELRLIYSACATREINNMLIEREMSVLEALQPNSNLNRLTIEHYRGTSFPNWLGGCHLSNLVSLALSGCELCSHLPPFELFPYLKRLSISNCHGIEVIDFSNSPFRSLEILHFVNMSNWKEWLCVEGFPLLKDLSIQSCPKLKKALPNHLPSLQDLAITDCQELEASISMASNIGTLLLAGCENILINDLPSKLTSVILRGTQVIASSLEQILLNNAFLKSLNIGGFDSANLEWSSLDFPCYNSLCKLFVSGWHSSFPFSLHLFTNLKSLYLCGCPQLESFPGGGLPSTLFSLHIINCPKLFASRGEWGLFQLNSLNDFGVSDEFEIVESFPEENLLPPALVALTLTNCSKLRIMNYKGLLHLKSFNSLWIERCPSLERLPEEGLPNSLSILDINNCPLLKEKYQKEEGERWHTICHIPSVRILD