Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87403.t1 | XP_003629491.1 | 98.4 | 375 | 6 | 0 | 1 | 375 | 1 | 375 | 1.70E-174 | 622.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87403.t1 | Q56XQ0 | 47.0 | 379 | 195 | 2 | 1 | 374 | 2 | 379 | 9.4e-89 | 328.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87403.t1 | G7LEW4 | 98.4 | 375 | 6 | 0 | 1 | 375 | 1 | 375 | 1.2e-174 | 622.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050114 | MS.gene87403 | 0.801197 | 1.01E-48 | -1.69E-46 |
| MS.gene05059 | MS.gene87403 | 0.803843 | 2.87E-49 | -1.69E-46 |
| MS.gene051490 | MS.gene87403 | 0.810565 | 1.08E-50 | -1.69E-46 |
| MS.gene051831 | MS.gene87403 | 0.82181 | 3.31E-53 | -1.69E-46 |
| MS.gene052242 | MS.gene87403 | -0.804961 | 1.68E-49 | -1.69E-46 |
| MS.gene054222 | MS.gene87403 | 0.800415 | 1.46E-48 | -1.69E-46 |
| MS.gene054479 | MS.gene87403 | 0.802329 | 5.91E-49 | -1.69E-46 |
| MS.gene054576 | MS.gene87403 | 0.819805 | 9.58E-53 | -1.69E-46 |
| MS.gene054892 | MS.gene87403 | 0.808962 | 2.39E-50 | -1.69E-46 |
| MS.gene054893 | MS.gene87403 | 0.81045 | 1.15E-50 | -1.69E-46 |
| MS.gene055603 | MS.gene87403 | 0.801984 | 6.96E-49 | -1.69E-46 |
| MS.gene05761 | MS.gene87403 | 0.800408 | 1.46E-48 | -1.69E-46 |
| MS.gene058429 | MS.gene87403 | 0.802565 | 5.28E-49 | -1.69E-46 |
| MS.gene059170 | MS.gene87403 | 0.822713 | 2.04E-53 | -1.69E-46 |
| MS.gene059774 | MS.gene87403 | 0.803487 | 3.41E-49 | -1.69E-46 |
| MS.gene060259 | MS.gene87403 | 0.807464 | 4.99E-50 | -1.69E-46 |
| MS.gene060697 | MS.gene87403 | 0.802721 | 4.90E-49 | -1.69E-46 |
| MS.gene060840 | MS.gene87403 | 0.814092 | 1.84E-51 | -1.69E-46 |
| MS.gene060932 | MS.gene87403 | 0.814188 | 1.75E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87403.t1 | MTR_8g078100 | 98.133 | 375 | 7 | 0 | 1 | 375 | 1 | 375 | 0.0 | 756 |
| MS.gene87403.t1 | MTR_5g019430 | 70.292 | 377 | 107 | 2 | 1 | 372 | 1 | 377 | 0.0 | 542 |
| MS.gene87403.t1 | MTR_4g069160 | 58.355 | 377 | 151 | 4 | 1 | 375 | 1 | 373 | 3.39e-147 | 421 |
| MS.gene87403.t1 | MTR_1g034480 | 55.733 | 375 | 159 | 3 | 1 | 374 | 1 | 369 | 5.35e-137 | 395 |
| MS.gene87403.t1 | MTR_3g011140 | 62.162 | 74 | 28 | 0 | 285 | 358 | 1 | 74 | 9.19e-26 | 99.8 |
| MS.gene87403.t1 | MTR_8g068520 | 22.293 | 314 | 206 | 7 | 76 | 373 | 86 | 377 | 6.06e-12 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87403.t1 | AT2G18630 | 54.354 | 379 | 167 | 2 | 1 | 374 | 2 | 379 | 2.15e-138 | 399 |
| MS.gene87403.t1 | AT2G18630 | 54.354 | 379 | 167 | 2 | 1 | 374 | 2 | 379 | 3.20e-138 | 399 |
| MS.gene87403.t1 | AT4G34320 | 55.319 | 376 | 159 | 5 | 1 | 375 | 1 | 368 | 6.37e-132 | 382 |
| MS.gene87403.t1 | AT4G34320 | 55.319 | 376 | 159 | 5 | 1 | 375 | 1 | 368 | 6.37e-132 | 382 |
| MS.gene87403.t1 | AT5G66675 | 53.134 | 367 | 162 | 4 | 16 | 374 | 32 | 396 | 2.45e-126 | 370 |
| MS.gene87403.t1 | AT5G66675 | 53.134 | 367 | 162 | 4 | 16 | 374 | 32 | 396 | 2.45e-126 | 370 |
| MS.gene87403.t1 | AT5G66675 | 53.134 | 367 | 162 | 4 | 16 | 374 | 32 | 396 | 2.45e-126 | 370 |
| MS.gene87403.t1 | AT5G66675 | 53.134 | 367 | 162 | 4 | 16 | 374 | 32 | 396 | 2.45e-126 | 370 |
| MS.gene87403.t1 | AT4G34330 | 48.851 | 348 | 162 | 3 | 24 | 371 | 17 | 348 | 1.48e-106 | 317 |
| MS.gene87403.t1 | AT5G66670 | 41.899 | 358 | 201 | 2 | 21 | 371 | 35 | 392 | 3.38e-88 | 272 |
| MS.gene87403.t1 | AT5G66670 | 41.899 | 358 | 201 | 2 | 21 | 371 | 35 | 392 | 3.38e-88 | 272 |
| MS.gene87403.t1 | AT5G66670 | 41.899 | 358 | 201 | 2 | 21 | 371 | 35 | 392 | 3.38e-88 | 272 |
| MS.gene87403.t1 | AT5G66670 | 41.899 | 358 | 201 | 2 | 21 | 371 | 35 | 392 | 3.38e-88 | 272 |
| MS.gene87403.t1 | AT5G66660 | 41.713 | 362 | 203 | 2 | 21 | 374 | 35 | 396 | 5.42e-85 | 263 |
| MS.gene87403.t1 | AT3G28270 | 27.933 | 358 | 242 | 6 | 28 | 370 | 16 | 372 | 6.11e-36 | 135 |
| MS.gene87403.t1 | AT3G28270 | 27.933 | 358 | 242 | 6 | 28 | 370 | 16 | 372 | 6.11e-36 | 135 |
| MS.gene87403.t1 | AT3G28290 | 25.661 | 378 | 242 | 12 | 24 | 370 | 11 | 380 | 4.66e-29 | 116 |
| MS.gene87403.t1 | AT3G28300 | 25.661 | 378 | 242 | 12 | 24 | 370 | 11 | 380 | 4.66e-29 | 116 |
| MS.gene87403.t1 | AT3G57100 | 25.705 | 319 | 210 | 5 | 65 | 370 | 43 | 347 | 2.05e-25 | 105 |
| MS.gene87403.t1 | AT3G28320 | 23.492 | 315 | 214 | 8 | 80 | 370 | 2 | 313 | 2.78e-20 | 90.9 |
Find 58 sgRNAs with CRISPR-Local
Find 77 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATAAAACTCCTCCGTAAA+AGG | 0.159235 | 8.3:+26085601 | None:intergenic |
| TGAAGTTGTTAAAGTTATTT+TGG | 0.163128 | 8.3:-26085869 | MS.gene87403:CDS |
| TCATCAAAACTTTGCAAGTT+TGG | 0.189922 | 8.3:+26086009 | None:intergenic |
| TCGGGTGCTTACAAACAAAT+TGG | 0.255573 | 8.3:-26085227 | MS.gene87403:CDS |
| TGGATTGCAAGAGGGATATA+TGG | 0.257789 | 8.3:-26085849 | MS.gene87403:CDS |
| TTTGAAGAAGAGGTGCAAAA+TGG | 0.287245 | 8.3:-26085688 | MS.gene87403:CDS |
| TTACATTTCATTGAAGGATT+TGG | 0.290195 | 8.3:-26085257 | MS.gene87403:CDS |
| TTGCTACTGGTGTTGAAGTT+AGG | 0.293911 | 8.3:-26085948 | MS.gene87403:CDS |
| GGGATATGAGAAGGCTATAA+AGG | 0.305251 | 8.3:-26085317 | MS.gene87403:CDS |
| CATTCGGGTCGGTTGGAAAA+TGG | 0.337016 | 8.3:-26085357 | MS.gene87403:CDS |
| GCGGCGTTGGCTGTTCCATT+CGG | 0.349853 | 8.3:-26085373 | MS.gene87403:CDS |
| TGAAGGATTTGGACAACATT+CGG | 0.353812 | 8.3:-26085246 | MS.gene87403:CDS |
| AACAGCTTTGGCTGCGGCGT+TGG | 0.383556 | 8.3:-26085386 | MS.gene87403:CDS |
| GTTATTAGTTCTCTTGCTAC+TGG | 0.384834 | 8.3:-26085961 | MS.gene87403:CDS |
| CGGCGTTGGCTGTTCCATTC+GGG | 0.389129 | 8.3:-26085372 | MS.gene87403:CDS |
| GAAGGATTTGGACAACATTC+GGG | 0.389768 | 8.3:-26085245 | MS.gene87403:CDS |
| GGATTGCAAGAGGGATATAT+GGG | 0.412828 | 8.3:-26085848 | MS.gene87403:CDS |
| TCCGCCCGTTGTAACAGCTT+TGG | 0.415627 | 8.3:-26085398 | MS.gene87403:CDS |
| GAGGTGCAAAATGGGCTTGA+AGG | 0.435928 | 8.3:-26085679 | MS.gene87403:CDS |
| TTGAAGAAGAGGTGCAAAAT+GGG | 0.439323 | 8.3:-26085687 | MS.gene87403:CDS |
| AAGAGAACTAATAACCCTAT+TGG | 0.447555 | 8.3:+26085969 | None:intergenic |
| GGATATGAGAAGGCTATAAA+GGG | 0.447749 | 8.3:-26085316 | MS.gene87403:CDS |
| GTATTAAAGAGCATACCAAT+AGG | 0.457807 | 8.3:-26085984 | MS.gene87403:CDS |
| TGGTACTTACATTTCATTGA+AGG | 0.469068 | 8.3:-26085263 | MS.gene87403:CDS |
| GCAGCCAAAGCTGTTACAAC+GGG | 0.472631 | 8.3:+26085394 | None:intergenic |
| AATTACAAAACTCCAACGTC+TGG | 0.474086 | 8.3:+26085776 | None:intergenic |
| TCTAAGACCTCATCTCAATC+AGG | 0.476204 | 8.3:+26085004 | None:intergenic |
| AGGTGCAAAATGGGCTTGAA+GGG | 0.480313 | 8.3:-26085678 | MS.gene87403:CDS |
| AAACAAGGATTTGTTCGCAT+TGG | 0.490218 | 8.3:-26085824 | MS.gene87403:CDS |
| CTCTTGAGAAATGTTTGAGA+CGG | 0.491708 | 8.3:-26085753 | MS.gene87403:CDS |
| GCTGTTCCATTCGGGTCGGT+TGG | 0.492398 | 8.3:-26085364 | MS.gene87403:CDS |
| TGAAGACATTGCAAGAGCTT+AGG | 0.500716 | 8.3:-26085645 | MS.gene87403:CDS |
| TCAATCGGTTTATACGCAGC+AGG | 0.509528 | 8.3:-26085572 | MS.gene87403:CDS |
| TATTAAAGAGCATACCAATA+GGG | 0.511363 | 8.3:-26085983 | MS.gene87403:CDS |
| CGTTGTAACAGCTTTGGCTG+CGG | 0.511718 | 8.3:-26085392 | MS.gene87403:CDS |
| AATAAAACTCCTCCGTAAAA+GGG | 0.512251 | 8.3:+26085602 | None:intergenic |
| TCTTGAGAAATGTTTGAGAC+GGG | 0.517157 | 8.3:-26085752 | MS.gene87403:CDS |
| CGCAGCCAAAGCTGTTACAA+CGG | 0.524710 | 8.3:+26085393 | None:intergenic |
| ATATGAAGCTGCATGTATCA+AGG | 0.527102 | 8.3:-26086034 | MS.gene87403:CDS |
| AGGGAATTCAAGCAAGATGA+TGG | 0.547310 | 8.3:-26086118 | MS.gene87403:CDS |
| AGTTGAAATCACTCAAGTCA+TGG | 0.549628 | 8.3:-26085501 | MS.gene87403:CDS |
| GAAGGCTATAAAGGGACAAA+GGG | 0.553000 | 8.3:-26085308 | MS.gene87403:CDS |
| AGAAGGCTATAAAGGGACAA+AGG | 0.553211 | 8.3:-26085309 | MS.gene87403:CDS |
| GAATCAAGTGATTGTTAAGT+CGG | 0.557993 | 8.3:-26085722 | MS.gene87403:CDS |
| GCCAAAGCTGTTACAACGGG+CGG | 0.569880 | 8.3:+26085397 | None:intergenic |
| ATCTGAGGTATTAAGATGGG+AGG | 0.576566 | 8.3:-26086138 | None:intergenic |
| GTTGGCTGTTCCATTCGGGT+CGG | 0.587471 | 8.3:-26085368 | MS.gene87403:CDS |
| AATCACTCAAGTCATGGAAG+AGG | 0.591019 | 8.3:-26085495 | MS.gene87403:CDS |
| GATTTGCAATTTCTTCAACA+TGG | 0.599579 | 8.3:+26085546 | None:intergenic |
| TGATAATAGTCTCCAGACGT+TGG | 0.605979 | 8.3:-26085788 | MS.gene87403:CDS |
| GAGGGATATATGGGGAAACA+AGG | 0.609168 | 8.3:-26085839 | MS.gene87403:CDS |
| ATCACTCAAGTCATGGAAGA+GGG | 0.610181 | 8.3:-26085494 | MS.gene87403:CDS |
| GGTGCAAAATGGGCTTGAAG+GGG | 0.611042 | 8.3:-26085677 | MS.gene87403:CDS |
| GTAGTTAGCTCAATGCAGCT+TGG | 0.613218 | 8.3:-26085283 | MS.gene87403:CDS |
| TCTGAGGTATTAAGATGGGA+GGG | 0.638076 | 8.3:-26086137 | None:intergenic |
| GTGCAAAATGGGCTTGAAGG+GGG | 0.641754 | 8.3:-26085676 | MS.gene87403:CDS |
| GATTGCAAGAGGGATATATG+GGG | 0.687000 | 8.3:-26085847 | MS.gene87403:CDS |
| GTCGACAGATAAGAAAAGCG+AGG | 0.701787 | 8.3:-26085057 | MS.gene87403:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAGAATATAGAAACTTTTTC+AGG | - | chr8.3:26086023-26086042 | MS.gene87403:CDS | 20.0% |
| !!! | GTTTTATTTGTTGTTTCAAT+CGG | - | chr8.3:26085554-26085573 | MS.gene87403:CDS | 20.0% |
| !!! | TGAAGTTGTTAAAGTTATTT+TGG | - | chr8.3:26085272-26085291 | MS.gene87403:CDS | 20.0% |
| ! | TTACATTTCATTGAAGGATT+TGG | - | chr8.3:26085884-26085903 | MS.gene87403:CDS | 25.0% |
| !! | TATTAAAGAGCATACCAATA+GGG | - | chr8.3:26085158-26085177 | MS.gene87403:CDS | 25.0% |
| !! | TGATTTTGCTCTTAAAAATG+AGG | - | chr8.3:26085968-26085987 | MS.gene87403:CDS | 25.0% |
| !!! | GATTACTTATTTTGAAGAAG+AGG | - | chr8.3:26085443-26085462 | MS.gene87403:CDS | 25.0% |
| AAATAAAACTCCTCCGTAAA+AGG | + | chr8.3:26085543-26085562 | None:intergenic | 30.0% | |
| AAGAGAACTAATAACCCTAT+TGG | + | chr8.3:26085175-26085194 | None:intergenic | 30.0% | |
| AATAAAACTCCTCCGTAAAA+GGG | + | chr8.3:26085542-26085561 | None:intergenic | 30.0% | |
| GAATCAAGTGATTGTTAAGT+CGG | - | chr8.3:26085419-26085438 | MS.gene87403:CDS | 30.0% | |
| GATTTGCAATTTCTTCAACA+TGG | + | chr8.3:26085598-26085617 | None:intergenic | 30.0% | |
| GCTAATGATTGCACAAAAAT+GGG | - | chr8.3:26085051-26085070 | MS.gene87403:CDS | 30.0% | |
| TCATCAAAACTTTGCAAGTT+TGG | + | chr8.3:26085135-26085154 | None:intergenic | 30.0% | |
| TGCTAATGATTGCACAAAAA+TGG | - | chr8.3:26085050-26085069 | MS.gene87403:CDS | 30.0% | |
| TGGTACTTACATTTCATTGA+AGG | - | chr8.3:26085878-26085897 | MS.gene87403:CDS | 30.0% | |
| ! | GTATTAAAGAGCATACCAAT+AGG | - | chr8.3:26085157-26085176 | MS.gene87403:CDS | 30.0% |
| !! | ACTTTTTAAGGGATATGAGA+AGG | - | chr8.3:26085815-26085834 | MS.gene87403:CDS | 30.0% |
| !! | TTAGGAATTTTAAGGATGCT+GGG | - | chr8.3:26085514-26085533 | MS.gene87403:CDS | 30.0% |
| !!! | AAGTTATTTTGGATTGCAAG+AGG | - | chr8.3:26085283-26085302 | MS.gene87403:CDS | 30.0% |
| !!! | AGAAACTTTTTCAGGAACAT+TGG | - | chr8.3:26086031-26086050 | MS.gene87403:CDS | 30.0% |
| !!! | AGTTATTTTGGATTGCAAGA+GGG | - | chr8.3:26085284-26085303 | MS.gene87403:CDS | 30.0% |
| !!! | GGTGTCAAATGCAATTTTTT+TGG | - | chr8.3:26085668-26085687 | MS.gene87403:CDS | 30.0% |
| AATTACAAAACTCCAACGTC+TGG | + | chr8.3:26085368-26085387 | None:intergenic | 35.0% | |
| AGTTGAAATCACTCAAGTCA+TGG | - | chr8.3:26085640-26085659 | MS.gene87403:CDS | 35.0% | |
| ATATGAAGCTGCATGTATCA+AGG | - | chr8.3:26085107-26085126 | MS.gene87403:CDS | 35.0% | |
| CTCTTGAGAAATGTTTGAGA+CGG | - | chr8.3:26085388-26085407 | MS.gene87403:CDS | 35.0% | |
| GGATATGAGAAGGCTATAAA+GGG | - | chr8.3:26085825-26085844 | MS.gene87403:CDS | 35.0% | |
| TGAAGGATTTGGACAACATT+CGG | - | chr8.3:26085895-26085914 | MS.gene87403:CDS | 35.0% | |
| ! | AAACAAGGATTTGTTCGCAT+TGG | - | chr8.3:26085317-26085336 | MS.gene87403:CDS | 35.0% |
| ! | GCAAGAGCTTAGGAATTTTA+AGG | - | chr8.3:26085506-26085525 | MS.gene87403:CDS | 35.0% |
| ! | GTTATTAGTTCTCTTGCTAC+TGG | - | chr8.3:26085180-26085199 | MS.gene87403:CDS | 35.0% |
| ! | TCTTGAGAAATGTTTGAGAC+GGG | - | chr8.3:26085389-26085408 | MS.gene87403:CDS | 35.0% |
| ! | TTGAAGAAGAGGTGCAAAAT+GGG | - | chr8.3:26085454-26085473 | MS.gene87403:CDS | 35.0% |
| ! | TTTGAAGAAGAGGTGCAAAA+TGG | - | chr8.3:26085453-26085472 | MS.gene87403:CDS | 35.0% |
| !! | CTTAGGAATTTTAAGGATGC+TGG | - | chr8.3:26085513-26085532 | MS.gene87403:CDS | 35.0% |
| !! | TAGGAATTTTAAGGATGCTG+GGG | - | chr8.3:26085515-26085534 | MS.gene87403:CDS | 35.0% |
| !!! | ATGGTGCAACTCACTTTTTA+AGG | - | chr8.3:26085803-26085822 | MS.gene87403:CDS | 35.0% |
| !!! | TGGTGCAACTCACTTTTTAA+GGG | - | chr8.3:26085804-26085823 | MS.gene87403:CDS | 35.0% |
| !!! | TTTTTTGGCTGCGTTTGTTT+CGG | - | chr8.3:26085683-26085702 | MS.gene87403:CDS | 35.0% |
| AATCACTCAAGTCATGGAAG+AGG | - | chr8.3:26085646-26085665 | MS.gene87403:CDS | 40.0% | |
| AGAAGGCTATAAAGGGACAA+AGG | - | chr8.3:26085832-26085851 | MS.gene87403:CDS | 40.0% | |
| AGGGAATTCAAGCAAGATGA+TGG | - | chr8.3:26085023-26085042 | MS.gene87403:CDS | 40.0% | |
| ATCACTCAAGTCATGGAAGA+GGG | - | chr8.3:26085647-26085666 | MS.gene87403:CDS | 40.0% | |
| GAAGGATTTGGACAACATTC+GGG | - | chr8.3:26085896-26085915 | MS.gene87403:CDS | 40.0% | |
| GAAGGCTATAAAGGGACAAA+GGG | - | chr8.3:26085833-26085852 | MS.gene87403:CDS | 40.0% | |
| GATTGCAAGAGGGATATATG+GGG | - | chr8.3:26085294-26085313 | MS.gene87403:CDS | 40.0% | |
| GGATTGCAAGAGGGATATAT+GGG | - | chr8.3:26085293-26085312 | MS.gene87403:CDS | 40.0% | |
| GGGATATGAGAAGGCTATAA+AGG | - | chr8.3:26085824-26085843 | MS.gene87403:CDS | 40.0% | |
| TCGGGTGCTTACAAACAAAT+TGG | - | chr8.3:26085914-26085933 | MS.gene87403:CDS | 40.0% | |
| TGAAGACATTGCAAGAGCTT+AGG | - | chr8.3:26085496-26085515 | MS.gene87403:CDS | 40.0% | |
| TGATAATAGTCTCCAGACGT+TGG | - | chr8.3:26085353-26085372 | MS.gene87403:CDS | 40.0% | |
| TGGATTGCAAGAGGGATATA+TGG | - | chr8.3:26085292-26085311 | MS.gene87403:CDS | 40.0% | |
| ! | TTGCTACTGGTGTTGAAGTT+AGG | - | chr8.3:26085193-26085212 | MS.gene87403:CDS | 40.0% |
| !!! | TTCGGTGTTGATTTTCTCTG+TGG | - | chr8.3:26085701-26085720 | MS.gene87403:CDS | 40.0% |
| GAGGGATATATGGGGAAACA+AGG | - | chr8.3:26085302-26085321 | MS.gene87403:CDS | 45.0% | |
| GTAGTTAGCTCAATGCAGCT+TGG | - | chr8.3:26085858-26085877 | MS.gene87403:CDS | 45.0% | |
| GTCGACAGATAAGAAAAGCG+AGG | - | chr8.3:26086084-26086103 | MS.gene87403:CDS | 45.0% | |
| ! | AGGTGCAAAATGGGCTTGAA+GGG | - | chr8.3:26085463-26085482 | MS.gene87403:CDS | 45.0% |
| ! | TCAATCGGTTTATACGCAGC+AGG | - | chr8.3:26085569-26085588 | MS.gene87403:CDS | 45.0% |
| CATTCGGGTCGGTTGGAAAA+TGG | - | chr8.3:26085784-26085803 | MS.gene87403:CDS | 50.0% | |
| CGCAGCCAAAGCTGTTACAA+CGG | + | chr8.3:26085751-26085770 | None:intergenic | 50.0% | |
| GCAGCCAAAGCTGTTACAAC+GGG | + | chr8.3:26085750-26085769 | None:intergenic | 50.0% | |
| ! | CATTTTCCAACCGACCCGAA+TGG | + | chr8.3:26085786-26085805 | None:intergenic | 50.0% |
| ! | CGTTGTAACAGCTTTGGCTG+CGG | - | chr8.3:26085749-26085768 | MS.gene87403:CDS | 50.0% |
| ! | GAGGTGCAAAATGGGCTTGA+AGG | - | chr8.3:26085462-26085481 | MS.gene87403:CDS | 50.0% |
| ! | GGTGCAAAATGGGCTTGAAG+GGG | - | chr8.3:26085464-26085483 | MS.gene87403:CDS | 50.0% |
| ! | GTGCAAAATGGGCTTGAAGG+GGG | - | chr8.3:26085465-26085484 | MS.gene87403:CDS | 50.0% |
| GCCAAAGCTGTTACAACGGG+CGG | + | chr8.3:26085747-26085766 | None:intergenic | 55.0% | |
| GTTGGCTGTTCCATTCGGGT+CGG | - | chr8.3:26085773-26085792 | MS.gene87403:CDS | 55.0% | |
| TCCGCCCGTTGTAACAGCTT+TGG | - | chr8.3:26085743-26085762 | MS.gene87403:CDS | 55.0% | |
| ! | GGATGCTGGGGACCCTTTTA+CGG | - | chr8.3:26085527-26085546 | MS.gene87403:CDS | 55.0% |
| GCTGTTCCATTCGGGTCGGT+TGG | - | chr8.3:26085777-26085796 | MS.gene87403:CDS | 60.0% | |
| ! | AACAGCTTTGGCTGCGGCGT+TGG | - | chr8.3:26085755-26085774 | MS.gene87403:CDS | 60.0% |
| ! | TGCTGGGGACCCTTTTACGG+AGG | - | chr8.3:26085530-26085549 | MS.gene87403:CDS | 60.0% |
| !! | CGGCGTTGGCTGTTCCATTC+GGG | - | chr8.3:26085769-26085788 | MS.gene87403:CDS | 60.0% |
| !! | GCGGCGTTGGCTGTTCCATT+CGG | - | chr8.3:26085768-26085787 | MS.gene87403:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 26085018 | 26086145 | 26085018 | ID=MS.gene87403 |
| chr8.3 | mRNA | 26085018 | 26086145 | 26085018 | ID=MS.gene87403.t1;Parent=MS.gene87403 |
| chr8.3 | exon | 26085018 | 26086145 | 26085018 | ID=MS.gene87403.t1.exon1;Parent=MS.gene87403.t1 |
| chr8.3 | CDS | 26085018 | 26086145 | 26085018 | ID=cds.MS.gene87403.t1;Parent=MS.gene87403.t1 |
| Gene Sequence |
| Protein sequence |
