Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88917.t1 | XP_003592082.1 | 99.3 | 443 | 3 | 0 | 1 | 443 | 1 | 443 | 9.10E-252 | 879 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88917.t1 | Q6ICX4 | 82.7 | 444 | 64 | 2 | 1 | 443 | 1 | 432 | 2.5e-210 | 732.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88917.t1 | G7IBX9 | 99.3 | 443 | 3 | 0 | 1 | 443 | 1 | 443 | 6.6e-252 | 879.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene88917 | MS.gene24450 | PPI |
| MS.gene055644 | MS.gene88917 | PPI |
| MS.gene44109 | MS.gene88917 | PPI |
| MS.gene88917 | MS.gene00478 | PPI |
| MS.gene056047 | MS.gene88917 | PPI |
| MS.gene41083 | MS.gene88917 | PPI |
| MS.gene005239 | MS.gene88917 | PPI |
| MS.gene88917 | MS.gene044085 | PPI |
| MS.gene00474 | MS.gene88917 | PPI |
| MS.gene88917 | MS.gene055646 | PPI |
| MS.gene41081 | MS.gene88917 | PPI |
| MS.gene034801 | MS.gene88917 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88917.t1 | MTR_1g098530 | 99.323 | 443 | 3 | 0 | 1 | 443 | 1 | 443 | 0.0 | 913 |
| MS.gene88917.t1 | MTR_6g043520 | 84.424 | 443 | 69 | 0 | 1 | 443 | 1 | 443 | 0.0 | 775 |
| MS.gene88917.t1 | MTR_6g037550 | 78.797 | 316 | 61 | 1 | 1 | 316 | 1 | 310 | 0.0 | 517 |
| MS.gene88917.t1 | MTR_6g037540 | 75.591 | 127 | 31 | 0 | 317 | 443 | 1 | 127 | 2.97e-67 | 211 |
| MS.gene88917.t1 | MTR_6g037510 | 80.899 | 89 | 17 | 0 | 231 | 319 | 1 | 89 | 1.16e-45 | 153 |
| MS.gene88917.t1 | MTR_7g011070 | 32.277 | 347 | 182 | 11 | 4 | 333 | 17 | 327 | 4.17e-44 | 161 |
| MS.gene88917.t1 | MTR_7g011070 | 32.258 | 217 | 107 | 6 | 21 | 197 | 129 | 345 | 8.10e-20 | 92.0 |
| MS.gene88917.t1 | MTR_6g012590 | 30.747 | 348 | 186 | 10 | 4 | 333 | 16 | 326 | 1.38e-42 | 156 |
| MS.gene88917.t1 | MTR_6g012590 | 30.081 | 246 | 126 | 9 | 21 | 223 | 128 | 370 | 1.89e-17 | 84.7 |
| MS.gene88917.t1 | MTR_3g090960 | 31.322 | 348 | 186 | 12 | 4 | 334 | 16 | 327 | 6.14e-40 | 150 |
| MS.gene88917.t1 | MTR_3g090960 | 32.143 | 224 | 98 | 6 | 21 | 197 | 128 | 344 | 1.13e-23 | 103 |
| MS.gene88917.t1 | MTR_1g028440 | 31.897 | 348 | 184 | 11 | 4 | 334 | 16 | 327 | 5.04e-37 | 140 |
| MS.gene88917.t1 | MTR_1g028440 | 33.180 | 217 | 105 | 6 | 21 | 197 | 128 | 344 | 1.01e-23 | 103 |
| MS.gene88917.t1 | MTR_8g072130 | 54.545 | 121 | 21 | 1 | 317 | 437 | 1 | 87 | 1.54e-36 | 129 |
| MS.gene88917.t1 | MTR_3g090960 | 31.674 | 221 | 98 | 5 | 23 | 197 | 1 | 214 | 1.79e-24 | 104 |
| MS.gene88917.t1 | MTR_3g090960 | 30.568 | 229 | 114 | 7 | 118 | 334 | 2 | 197 | 3.02e-19 | 89.4 |
| MS.gene88917.t1 | MTR_6g037520 | 67.308 | 52 | 17 | 0 | 340 | 391 | 78 | 129 | 3.12e-19 | 84.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88917.t1 | AT1G43190 | 82.658 | 444 | 64 | 2 | 1 | 443 | 1 | 432 | 0.0 | 751 |
| MS.gene88917.t1 | AT1G43190 | 82.658 | 444 | 64 | 2 | 1 | 443 | 1 | 432 | 0.0 | 751 |
| MS.gene88917.t1 | AT1G43190 | 82.207 | 444 | 64 | 3 | 1 | 443 | 1 | 430 | 0.0 | 742 |
| MS.gene88917.t1 | AT3G01150 | 31.319 | 364 | 196 | 12 | 4 | 348 | 15 | 343 | 1.25e-44 | 160 |
| MS.gene88917.t1 | AT3G01150 | 30.741 | 270 | 131 | 9 | 15 | 243 | 122 | 376 | 7.73e-22 | 97.4 |
| MS.gene88917.t1 | AT3G01150 | 32.424 | 330 | 175 | 10 | 4 | 320 | 15 | 309 | 7.31e-44 | 156 |
| MS.gene88917.t1 | AT3G01150 | 30.159 | 189 | 94 | 4 | 15 | 165 | 122 | 310 | 1.57e-14 | 74.7 |
| MS.gene88917.t1 | AT5G53180 | 31.034 | 348 | 187 | 12 | 4 | 334 | 16 | 327 | 4.93e-40 | 149 |
| MS.gene88917.t1 | AT5G53180 | 33.962 | 212 | 100 | 7 | 21 | 192 | 128 | 339 | 1.09e-24 | 105 |
| MS.gene88917.t1 | AT5G53180 | 33.493 | 209 | 100 | 6 | 23 | 192 | 1 | 209 | 3.89e-26 | 107 |
| MS.gene88917.t1 | AT5G53180 | 33.173 | 208 | 100 | 6 | 24 | 192 | 32 | 239 | 5.34e-25 | 105 |
| MS.gene88917.t1 | AT5G53180 | 33.173 | 208 | 100 | 6 | 24 | 192 | 33 | 240 | 5.81e-25 | 105 |
| MS.gene88917.t1 | AT5G53180 | 33.173 | 208 | 100 | 6 | 24 | 192 | 18 | 225 | 5.86e-25 | 105 |
| MS.gene88917.t1 | AT5G53180 | 46.154 | 104 | 54 | 2 | 91 | 192 | 126 | 229 | 4.06e-22 | 97.1 |
| MS.gene88917.t1 | AT3G01150 | 29.032 | 248 | 130 | 7 | 115 | 348 | 3 | 218 | 8.90e-22 | 95.1 |
| MS.gene88917.t1 | AT3G01150 | 31.034 | 261 | 124 | 9 | 24 | 243 | 6 | 251 | 2.20e-21 | 94.0 |
| MS.gene88917.t1 | AT3G01150 | 30.374 | 214 | 109 | 5 | 115 | 320 | 3 | 184 | 6.26e-21 | 90.5 |
| MS.gene88917.t1 | AT3G01150 | 30.556 | 180 | 87 | 4 | 24 | 165 | 6 | 185 | 2.24e-14 | 72.0 |
Find 103 sgRNAs with CRISPR-Local
Find 300 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAACTTGTTCTCCCTTTA+TGG | 0.035664 | 1.1:-70870825 | MS.gene88917:CDS |
| GCGGCCATTGCAGCTGCTTT+TGG | 0.074456 | 1.1:-70871018 | MS.gene88917:CDS |
| TACGAACTTTGTAGGCTTTC+AGG | 0.175411 | 1.1:-70872364 | MS.gene88917:intron |
| TTCTGTTCTGTAGGGAGATT+TGG | 0.179215 | 1.1:+70871832 | None:intergenic |
| CTTCAGTTATTTCAACCTTT+TGG | 0.234793 | 1.1:-70874038 | MS.gene88917:CDS |
| CGCTTTCTGGCTCGGTAATT+CGG | 0.274128 | 1.1:-70869671 | MS.gene88917:CDS |
| AGCTGCAATGGCCGCAGCAT+TGG | 0.284533 | 1.1:+70871026 | None:intergenic |
| TTCTCACAATGTTTCCATAA+AGG | 0.300059 | 1.1:+70870811 | None:intergenic |
| TCTCACAATGTTTCCATAAA+GGG | 0.309290 | 1.1:+70870812 | None:intergenic |
| GCTGCAATGGCCGCAGCATT+GGG | 0.311225 | 1.1:+70871027 | None:intergenic |
| AAGCATGCTACCTCGCTTTC+TGG | 0.321751 | 1.1:-70869684 | MS.gene88917:CDS |
| TGGTTCCATGCTCCTCTAGA+AGG | 0.326729 | 1.1:+70869799 | None:intergenic |
| GGTTTGCCTCCTGGAATAAC+TGG | 0.333821 | 1.1:-70870991 | MS.gene88917:CDS |
| TACTGCAAGAACTGCACTTC+AGG | 0.342948 | 1.1:-70872307 | MS.gene88917:intron |
| CAGAAGGAACGTCTTGCATT+TGG | 0.346584 | 1.1:+70873842 | None:intergenic |
| TCTGTTCTGTAGGGAGATTT+GGG | 0.347660 | 1.1:+70871833 | None:intergenic |
| AACTCTGTTGTGATTGATAC+TGG | 0.373607 | 1.1:+70872334 | None:intergenic |
| TCAGCACCTTGTGTTATGTT+TGG | 0.381551 | 1.1:+70869960 | None:intergenic |
| AGGAAGCATGTATGGTGTTC+AGG | 0.389056 | 1.1:-70871628 | MS.gene88917:CDS |
| ATACAGTACATCCACTGTTA+TGG | 0.393709 | 1.1:+70873213 | None:intergenic |
| ATGTATGGTGTTCAGGGTTC+TGG | 0.394858 | 1.1:-70871621 | MS.gene88917:CDS |
| AGCAAAGTATTTGAGATGAA+TGG | 0.395330 | 1.1:-70869768 | MS.gene88917:CDS |
| GCTCTTGATGAGATGAAAAC+TGG | 0.405496 | 1.1:+70873610 | None:intergenic |
| AAGAGTACCTTATGCTTGGC+TGG | 0.410645 | 1.1:+70873788 | None:intergenic |
| TCATTTGTCCCAGTTATTCC+AGG | 0.410874 | 1.1:+70870982 | None:intergenic |
| CATCTTCAGTGATGTCTTGT+GGG | 0.410989 | 1.1:+70869832 | None:intergenic |
| GAATTGTAACTAAGAGAATT+CGG | 0.415308 | 1.1:+70873251 | None:intergenic |
| CTTGGAAACCATCTCCCATC+TGG | 0.416528 | 1.1:+70870751 | None:intergenic |
| GAATAACTGGGACAAATGAT+AGG | 0.422703 | 1.1:-70870978 | MS.gene88917:CDS |
| GCAAAGTATTTGAGATGAAT+GGG | 0.425279 | 1.1:-70869767 | MS.gene88917:CDS |
| GTCATTCATGTTCGAAATGT+GGG | 0.433953 | 1.1:-70874902 | MS.gene88917:CDS |
| ACAAATGAATCATCTTCGTT+GGG | 0.440370 | 1.1:+70869862 | None:intergenic |
| CAGGGTTCTGGACCCAGGGC+AGG | 0.442597 | 1.1:-70871609 | MS.gene88917:intron |
| TGCTACCTCGCTTTCTGGCT+CGG | 0.444036 | 1.1:-70869679 | MS.gene88917:CDS |
| ATTATAATAATGACCGTTCA+AGG | 0.444162 | 1.1:-70871953 | MS.gene88917:intron |
| AGATGGTTTCCAAGCTGAAC+TGG | 0.446354 | 1.1:-70870742 | MS.gene88917:CDS |
| AGGTAGCATGCTTGCATACA+AGG | 0.447408 | 1.1:+70869694 | None:intergenic |
| TCAGTTTGAGACTGAGGATC+AGG | 0.451143 | 1.1:-70869727 | MS.gene88917:CDS |
| GTGTTCAGGGTTCTGGACCC+AGG | 0.453204 | 1.1:-70871614 | MS.gene88917:CDS |
| TTATGATGGTTGCTGTCAGC+TGG | 0.464841 | 1.1:-70872180 | MS.gene88917:CDS |
| CGAACATGAATGACCTTGGA+AGG | 0.468919 | 1.1:+70874911 | None:intergenic |
| TATATTCTGCAATTGAGAAT+AGG | 0.470609 | 1.1:+70869644 | None:intergenic |
| GACAAATGAATCATCTTCGT+TGG | 0.470970 | 1.1:+70869861 | None:intergenic |
| TACAGTACATCCACTGTTAT+GGG | 0.471701 | 1.1:+70873214 | None:intergenic |
| TAGGGTCGCAATATTTATGA+TGG | 0.475560 | 1.1:-70872194 | MS.gene88917:CDS |
| CAGCTTGGATATGGTGATGC+AGG | 0.477074 | 1.1:-70871648 | MS.gene88917:CDS |
| AATTCACTTGTAATTCATCA+AGG | 0.483108 | 1.1:+70871973 | None:intergenic |
| TCTGTGAAACAGCTTGGATA+TGG | 0.488413 | 1.1:-70871657 | MS.gene88917:intron |
| GTAACTAAGAGAATTCGGTT+TGG | 0.488756 | 1.1:+70873256 | None:intergenic |
| GTTAAATTTAGCACCTGCCC+TGG | 0.490169 | 1.1:+70871596 | None:intergenic |
| GGCCTGCCTTTCTGTTCTGT+AGG | 0.492436 | 1.1:+70871823 | None:intergenic |
| GCCTGCCTTTCTGTTCTGTA+GGG | 0.494453 | 1.1:+70871824 | None:intergenic |
| ATCTGGATAAGTGCATGATC+TGG | 0.502751 | 1.1:+70870768 | None:intergenic |
| GGAAGCATGTATGGTGTTCA+GGG | 0.508233 | 1.1:-70871627 | MS.gene88917:CDS |
| AGCTTTGTGATGACTCCAAA+AGG | 0.509921 | 1.1:+70874023 | None:intergenic |
| AGCTAAGAGTACCTTATGCT+TGG | 0.512139 | 1.1:+70873784 | None:intergenic |
| GTGACATTTCAGAAGTCAGC+TGG | 0.518294 | 1.1:-70873154 | MS.gene88917:intron |
| CCTCAGTCTCAAACTGAACC+AGG | 0.518672 | 1.1:+70869733 | None:intergenic |
| GGTGATGCAGGAAGCATGTA+TGG | 0.523701 | 1.1:-70871636 | MS.gene88917:CDS |
| TCATCTTCAGTGATGTCTTG+TGG | 0.524428 | 1.1:+70869831 | None:intergenic |
| GCACTTATCCAGATGGGAGA+TGG | 0.531925 | 1.1:-70870759 | MS.gene88917:CDS |
| TATCATGGCTGAACCTTCCA+AGG | 0.532831 | 1.1:-70874924 | None:intergenic |
| AGAGTACCTTATGCTTGGCT+GGG | 0.540483 | 1.1:+70873789 | None:intergenic |
| ATTTCGAACATGAATGACCT+TGG | 0.541812 | 1.1:+70874907 | None:intergenic |
| TAGCAGCGTTACGATTAAAA+CGG | 0.543089 | 1.1:+70869907 | None:intergenic |
| GAAACACCCAGCCAAGCATA+AGG | 0.545572 | 1.1:-70873795 | MS.gene88917:intron |
| TGTTCAGGGTTCTGGACCCA+GGG | 0.546711 | 1.1:-70871613 | MS.gene88917:CDS |
| TCCCTACAGAACAGAAAGGC+AGG | 0.547542 | 1.1:-70871825 | MS.gene88917:CDS |
| AAATACTTTGCTATTGACAA+TGG | 0.551736 | 1.1:+70869779 | None:intergenic |
| GGTCATTCATGTTCGAAATG+TGG | 0.557701 | 1.1:-70874903 | MS.gene88917:CDS |
| TTAAATTTAGCACCTGCCCT+GGG | 0.559061 | 1.1:+70871597 | None:intergenic |
| AGTGTACAGCCAGTTCAGCT+TGG | 0.569092 | 1.1:+70870733 | None:intergenic |
| AGTGATGTCTTGTGGGAGTG+TGG | 0.570311 | 1.1:+70869839 | None:intergenic |
| TGTAAAGCACTAACTGCAGA+AGG | 0.572096 | 1.1:+70873826 | None:intergenic |
| AGATCATGCACTTATCCAGA+TGG | 0.574543 | 1.1:-70870766 | MS.gene88917:CDS |
| CCTTCCAGTCGGATATCCAC+AGG | 0.574783 | 1.1:-70871498 | MS.gene88917:intron |
| GAATGGGAAGAAACAAGGCC+TGG | 0.576914 | 1.1:-70869751 | MS.gene88917:CDS |
| GGTTCCATGCTCCTCTAGAA+GGG | 0.591822 | 1.1:+70869800 | None:intergenic |
| GAGATGAATGGGAAGAAACA+AGG | 0.597286 | 1.1:-70869756 | MS.gene88917:CDS |
| CCTGGTTCAGTTTGAGACTG+AGG | 0.597497 | 1.1:-70869733 | MS.gene88917:CDS |
| GATCATGCACTTATCCAGAT+GGG | 0.599793 | 1.1:-70870765 | MS.gene88917:CDS |
| AGAGACTGAATCACCTTGAA+CGG | 0.607191 | 1.1:+70871940 | None:intergenic |
| AATTACCGAGCCAGAAAGCG+AGG | 0.607510 | 1.1:+70869674 | None:intergenic |
| ACTGGCTGTACACTTTCTGA+AGG | 0.611721 | 1.1:-70870724 | MS.gene88917:intron |
| TGAGATTGTGACCCTTCTAG+AGG | 0.616426 | 1.1:-70869811 | MS.gene88917:CDS |
| AAGTCAAGGACGAGGAGATG+AGG | 0.618331 | 1.1:-70873571 | MS.gene88917:intron |
| GTGACCCTTCTAGAGGAGCA+TGG | 0.626740 | 1.1:-70869804 | MS.gene88917:CDS |
| GTTTGCCTCCTGGAATAACT+GGG | 0.627364 | 1.1:-70870990 | MS.gene88917:CDS |
| AATCTCCCTACAGAACAGAA+AGG | 0.630603 | 1.1:-70871829 | MS.gene88917:CDS |
| ACAACAATAGATCAAAGTCA+AGG | 0.643404 | 1.1:-70873585 | MS.gene88917:CDS |
| GGTAGCATGCTTGCATACAA+GGG | 0.647100 | 1.1:+70869695 | None:intergenic |
| CAAATGAATCATCTTCGTTG+GGG | 0.661543 | 1.1:+70869863 | None:intergenic |
| TCGTTGGGGAGCAGCAATAG+CGG | 0.661679 | 1.1:+70869877 | None:intergenic |
| TCATTCATGTTCGAAATGTG+GGG | 0.666929 | 1.1:-70874901 | MS.gene88917:CDS |
| TTTGTCCCAGTTATTCCAGG+AGG | 0.668050 | 1.1:+70870985 | None:intergenic |
| ATAGATCAAAGTCAAGGACG+AGG | 0.680422 | 1.1:-70873579 | MS.gene88917:CDS |
| CAAACGAAACATACTTGCGG+AGG | 0.683415 | 1.1:+70871802 | None:intergenic |
| AAGCATCCAAACATAACACA+AGG | 0.689131 | 1.1:-70869966 | MS.gene88917:CDS |
| ACTGTAGATGCCCAATGCTG+CGG | 0.690338 | 1.1:-70871037 | MS.gene88917:intron |
| CGTGCTCTATCCCATAACAG+TGG | 0.694871 | 1.1:-70873224 | MS.gene88917:CDS |
| TAGTCGCTTATCAAACAACA+TGG | 0.712872 | 1.1:+70870004 | None:intergenic |
| TGTGGGGCACGAAATATCCG+AGG | 0.714184 | 1.1:-70874885 | MS.gene88917:intron |
| ATCTTCTCCACAGATCCATG+AGG | 0.742999 | 1.1:+70873178 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTACTTTAATTTCTTATA+TGG | - | chr1.1:70872545-70872564 | MS.gene88917:intron | 10.0% |
| !!! | CTAATTATCTTTTTATTTTA+GGG | - | chr1.1:70870912-70870931 | MS.gene88917:intron | 10.0% |
| !!! | TAATTATCTTTTTATTTTAG+GGG | - | chr1.1:70870913-70870932 | MS.gene88917:intron | 10.0% |
| !!! | TCTAATTATCTTTTTATTTT+AGG | - | chr1.1:70870911-70870930 | MS.gene88917:intron | 10.0% |
| !!! | TTTGTAATTACATTTTTATA+TGG | - | chr1.1:70872089-70872108 | MS.gene88917:intron | 10.0% |
| !!! | TTTTTTTTTTTTATGTTTAG+CGG | - | chr1.1:70871958-70871977 | MS.gene88917:CDS | 10.0% |
| !! | AAAAAAATAAGAGAATAGAA+CGG | + | chr1.1:70873478-70873497 | None:intergenic | 15.0% |
| !! | AATCTTATAAATAGAAAAGA+GGG | + | chr1.1:70874503-70874522 | None:intergenic | 15.0% |
| !! | AATTAAAGTAAATAAGAGAA+AGG | + | chr1.1:70872538-70872557 | None:intergenic | 15.0% |
| !! | AATTCAGAAAAAAACTTAAA+AGG | + | chr1.1:70871473-70871492 | None:intergenic | 15.0% |
| !! | ACTTTGTTAAAAAAAAAATC+AGG | + | chr1.1:70874304-70874323 | None:intergenic | 15.0% |
| !! | ATTCAGAAAAAAACTTAAAA+GGG | + | chr1.1:70871472-70871491 | None:intergenic | 15.0% |
| !! | ATTTAAGTAAATGATTTACA+TGG | + | chr1.1:70874154-70874173 | None:intergenic | 15.0% |
| !! | GAATATTTAATTATAATACC+AGG | - | chr1.1:70873882-70873901 | MS.gene88917:intron | 15.0% |
| !! | TTATAATTAAATATTCAGCA+AGG | + | chr1.1:70873878-70873897 | None:intergenic | 15.0% |
| !! | TTATGTTCATTTACAATTAT+AGG | - | chr1.1:70870400-70870419 | MS.gene88917:intron | 15.0% |
| !!! | AATTATCTTTTTATTTTAGG+GGG | - | chr1.1:70870914-70870933 | MS.gene88917:intron | 15.0% |
| !!! | AATTGTTGTGTTTTTTTTTT+TGG | - | chr1.1:70869792-70869811 | MS.gene88917:CDS | 15.0% |
| !!! | ATGTGTTAAATAATATGTTT+TGG | - | chr1.1:70874346-70874365 | MS.gene88917:intron | 15.0% |
| !!! | ATTATTTTCTTAATTTTGGT+CGG | - | chr1.1:70873987-70874006 | MS.gene88917:intron | 15.0% |
| !!! | ATTGTTGTGTTTTTTTTTTT+GGG | - | chr1.1:70869793-70869812 | MS.gene88917:CDS | 15.0% |
| !!! | TTTTTCTTTTAAATGTTTAG+TGG | - | chr1.1:70872029-70872048 | MS.gene88917:intron | 15.0% |
| !!! | TTTTTTTTTTTATGTTTAGC+GGG | - | chr1.1:70871959-70871978 | MS.gene88917:CDS | 15.0% |
| !! | AAAAAATTCCACAAATTGAT+TGG | + | chr1.1:70873250-70873269 | None:intergenic | 20.0% |
| !! | AAAAATGTAATTACAAAGCA+AGG | + | chr1.1:70872086-70872105 | None:intergenic | 20.0% |
| !! | AAAAGATAATTAGATTGTTC+CGG | + | chr1.1:70870905-70870924 | None:intergenic | 20.0% |
| !! | AAAATGTAATTACAAAGCAA+GGG | + | chr1.1:70872085-70872104 | None:intergenic | 20.0% |
| !! | AAACAAACAATTTCATTTGA+AGG | + | chr1.1:70870604-70870623 | None:intergenic | 20.0% |
| !! | AAGTATATGATAAAGAGAAA+AGG | + | chr1.1:70871207-70871226 | None:intergenic | 20.0% |
| !! | ACTTCTAAATGAATTTCTAA+AGG | - | chr1.1:70871921-70871940 | MS.gene88917:intron | 20.0% |
| !! | CAATCTTATAAATAGAAAAG+AGG | + | chr1.1:70874504-70874523 | None:intergenic | 20.0% |
| !! | CCAATTAATATTAAAATCTC+CGG | - | chr1.1:70870883-70870902 | MS.gene88917:intron | 20.0% |
| !! | TCTAAATAATTTCTGTGTAT+TGG | - | chr1.1:70872434-70872453 | MS.gene88917:intron | 20.0% |
| !! | TGTATTTGTAATAGTATGTT+TGG | + | chr1.1:70871760-70871779 | None:intergenic | 20.0% |
| !!! | ACTTTTTTCTAAGTTGTTAA+TGG | + | chr1.1:70871617-70871636 | None:intergenic | 20.0% |
| !!! | AGTATGATTTTTTAGAAATC+TGG | - | chr1.1:70873429-70873448 | MS.gene88917:intron | 20.0% |
| !!! | ATTTTATTTGATGCATGTAT+AGG | - | chr1.1:70872139-70872158 | MS.gene88917:intron | 20.0% |
| !!! | ATTTTCAATTTTGAGATGTA+GGG | - | chr1.1:70874532-70874551 | MS.gene88917:intron | 20.0% |
| !!! | CTAAATATTGATTGAAACTT+TGG | - | chr1.1:70872337-70872356 | MS.gene88917:CDS | 20.0% |
| !!! | CTTTATTTATCTGTTATGAA+TGG | - | chr1.1:70872815-70872834 | MS.gene88917:intron | 20.0% |
| !!! | TAACATTTTCTTTCTGTTTT+TGG | - | chr1.1:70872282-70872301 | MS.gene88917:intron | 20.0% |
| !!! | TTATTTTGCTTTTCAAATCT+GGG | - | chr1.1:70873313-70873332 | MS.gene88917:intron | 20.0% |
| !!! | TTTAGTTTATTCAGATTTGA+TGG | + | chr1.1:70874455-70874474 | None:intergenic | 20.0% |
| !!! | TTTATTTTGCTTTTCAAATC+TGG | - | chr1.1:70873312-70873331 | MS.gene88917:intron | 20.0% |
| !!! | TTTTAGATATTGATTGTGAT+TGG | - | chr1.1:70869921-70869940 | MS.gene88917:CDS | 20.0% |
| ! | AAAAATGTGTAATGGTTGTA+AGG | - | chr1.1:70873188-70873207 | MS.gene88917:CDS | 25.0% |
| ! | AAACAAATTTCGAGCTAAAT+AGG | + | chr1.1:70873688-70873707 | None:intergenic | 25.0% |
| ! | AATTCACTTGTAATTCATCA+AGG | + | chr1.1:70872591-70872610 | None:intergenic | 25.0% |
| ! | AGATAACAATACAAAGATCT+AGG | + | chr1.1:70871130-70871149 | None:intergenic | 25.0% |
| ! | AGTAAATAAGAGAAAGGAAA+AGG | + | chr1.1:70872532-70872551 | None:intergenic | 25.0% |
| ! | ATAACAATACAAAGATCTAG+GGG | + | chr1.1:70871128-70871147 | None:intergenic | 25.0% |
| ! | ATTATAATAATGACCGTTCA+AGG | - | chr1.1:70872608-70872627 | MS.gene88917:intron | 25.0% |
| ! | GAATTGTAACTAAGAGAATT+CGG | + | chr1.1:70871313-70871332 | None:intergenic | 25.0% |
| ! | GATAACAATACAAAGATCTA+GGG | + | chr1.1:70871129-70871148 | None:intergenic | 25.0% |
| ! | GATCTTTGTATTGTTATCTT+AGG | - | chr1.1:70871131-70871150 | MS.gene88917:intron | 25.0% |
| ! | GCAAAAGTTATAAATCTTTC+AGG | + | chr1.1:70870480-70870499 | None:intergenic | 25.0% |
| ! | GCAACATTAAAAATGTGTAA+TGG | - | chr1.1:70873180-70873199 | MS.gene88917:CDS | 25.0% |
| ! | TATATTCTGCAATTGAGAAT+AGG | + | chr1.1:70874920-70874939 | None:intergenic | 25.0% |
| ! | TATTCCACACAATATACAAA+GGG | + | chr1.1:70874226-70874245 | None:intergenic | 25.0% |
| ! | TCACTTTCTCTAATTATTAC+CGG | - | chr1.1:70870069-70870088 | MS.gene88917:intron | 25.0% |
| ! | TGATATCAAAACAATAGTTG+TGG | + | chr1.1:70870819-70870838 | None:intergenic | 25.0% |
| ! | TTATTCCACACAATATACAA+AGG | + | chr1.1:70874227-70874246 | None:intergenic | 25.0% |
| ! | TTGAATAAGTATAAGCATAG+TGG | - | chr1.1:70871808-70871827 | MS.gene88917:intron | 25.0% |
| ! | TTTATACAACGATAAATCTC+TGG | + | chr1.1:70873968-70873987 | None:intergenic | 25.0% |
| !! | AGGATCTATTTTATAAGTAG+AGG | - | chr1.1:70874259-70874278 | MS.gene88917:intron | 25.0% |
| !! | AGTATGTTTGGAATATATGA+AGG | + | chr1.1:70871748-70871767 | None:intergenic | 25.0% |
| !! | GAAAGAAAAAACCTGATTTT+TGG | + | chr1.1:70870578-70870597 | None:intergenic | 25.0% |
| !! | GTATGTTTGGAATATATGAA+GGG | + | chr1.1:70871747-70871766 | None:intergenic | 25.0% |
| !! | TGAAACTTTGGAAATTTCTA+GGG | - | chr1.1:70872349-70872368 | MS.gene88917:CDS | 25.0% |
| !! | TGATGTTGTTTGTATGTAAT+AGG | - | chr1.1:70871875-70871894 | MS.gene88917:intron | 25.0% |
| !! | TTGAAACTTTGGAAATTTCT+AGG | - | chr1.1:70872348-70872367 | MS.gene88917:CDS | 25.0% |
| !!! | AAATACTTTGCTATTGACAA+TGG | + | chr1.1:70874785-70874804 | None:intergenic | 25.0% |
| !!! | AATTTTAACAGAGTGAATTG+AGG | - | chr1.1:70871489-70871508 | MS.gene88917:intron | 25.0% |
| !!! | ATGTTTTTATGACTATGCTA+TGG | - | chr1.1:70869766-70869785 | MS.gene88917:CDS | 25.0% |
| !!! | CCGGAGATTTTAATATTAAT+TGG | + | chr1.1:70870886-70870905 | None:intergenic | 25.0% |
| !!! | CTAAATTTAACTGATTTGGT+TGG | - | chr1.1:70872977-70872996 | MS.gene88917:intron | 25.0% |
| !!! | GATTTTCAATTTTGAGATGT+AGG | - | chr1.1:70874531-70874550 | MS.gene88917:intron | 25.0% |
| AAAACAAGAACTAACAAGTC+CGG | + | chr1.1:70872313-70872332 | None:intergenic | 30.0% | |
| AAATCACATTTCTCTTTCTC+TGG | - | chr1.1:70874115-70874134 | MS.gene88917:intron | 30.0% | |
| ACAAATGAATCATCTTCGTT+GGG | + | chr1.1:70874702-70874721 | None:intergenic | 30.0% | |
| ACAACAATAGATCAAAGTCA+AGG | - | chr1.1:70870976-70870995 | MS.gene88917:CDS | 30.0% | |
| ACGCATTATGCATGAATTAA+TGG | - | chr1.1:70871999-70872018 | MS.gene88917:intron | 30.0% | |
| ATATGAAAAATACTCACCTG+TGG | + | chr1.1:70873082-70873101 | None:intergenic | 30.0% | |
| ATGATCTTTGTCATCACATA+CGG | - | chr1.1:70870838-70870857 | MS.gene88917:CDS | 30.0% | |
| CGCACATTCAAAACAAAAAA+TGG | + | chr1.1:70869950-70869969 | None:intergenic | 30.0% | |
| GGATATTCAATTCTCAAAGT+AGG | - | chr1.1:70872402-70872421 | MS.gene88917:intron | 30.0% | |
| GGTGCTAAATTTAACTGATT+TGG | - | chr1.1:70872973-70872992 | MS.gene88917:intron | 30.0% | |
| GTAAATTCATCAAGTAAACC+TGG | + | chr1.1:70873903-70873922 | None:intergenic | 30.0% | |
| GTAATGGTTGTAAGGTATAA+CGG | - | chr1.1:70873196-70873215 | MS.gene88917:CDS | 30.0% | |
| GTCACAGTTTGATATTATTC+TGG | - | chr1.1:70873111-70873130 | MS.gene88917:intron | 30.0% | |
| TCAGATGTAATATTCTGACA+TGG | - | chr1.1:70874413-70874432 | MS.gene88917:intron | 30.0% | |
| TCTCACAATGTTTCCATAAA+GGG | + | chr1.1:70873752-70873771 | None:intergenic | 30.0% | |
| TGGAATAAGATTGCAATTGA+AGG | - | chr1.1:70874239-70874258 | MS.gene88917:intron | 30.0% | |
| TTCATCACAAGTTTCTTTGA+TGG | - | chr1.1:70874035-70874054 | MS.gene88917:CDS | 30.0% | |
| TTCTCACAATGTTTCCATAA+AGG | + | chr1.1:70873753-70873772 | None:intergenic | 30.0% | |
| TTTCAAATCTGGGTTTGATA+GGG | - | chr1.1:70873323-70873342 | MS.gene88917:intron | 30.0% | |
| TTTGTATGTAATAGGCACAT+AGG | - | chr1.1:70871883-70871902 | MS.gene88917:intron | 30.0% | |
| ! | AGCAAAGTATTTGAGATGAA+TGG | - | chr1.1:70874793-70874812 | MS.gene88917:intron | 30.0% |
| ! | GCAAAGTATTTGAGATGAAT+GGG | - | chr1.1:70874794-70874813 | MS.gene88917:intron | 30.0% |
| ! | GTTAGTGCTTTACAGTTTTA+TGG | - | chr1.1:70870744-70870763 | MS.gene88917:CDS | 30.0% |
| ! | TTTTCAAATCTGGGTTTGAT+AGG | - | chr1.1:70873322-70873341 | MS.gene88917:intron | 30.0% |
| !! | ACTTTTTCTTAGACCATGAT+CGG | - | chr1.1:70870275-70870294 | MS.gene88917:intron | 30.0% |
| !! | ATAATTTCTGTGTATTGGCT+TGG | - | chr1.1:70872439-70872458 | MS.gene88917:intron | 30.0% |
| !! | CTTCAGTTATTTCAACCTTT+TGG | - | chr1.1:70870523-70870542 | MS.gene88917:intron | 30.0% |
| !! | TGGAGCACTTTTAAATTCTA+AGG | + | chr1.1:70870628-70870647 | None:intergenic | 30.0% |
| !! | TTTTAGAAATTTCTTCGCAG+TGG | - | chr1.1:70869884-70869903 | MS.gene88917:CDS | 30.0% |
| !!! | TATCAAGTTTTTTCTCCTCA+TGG | - | chr1.1:70871368-70871387 | MS.gene88917:intron | 30.0% |
| !!! | TATCTTTTTATTTTAGGGGG+AGG | - | chr1.1:70870917-70870936 | MS.gene88917:intron | 30.0% |
| !!! | TGTTTTGAGTTTCTGTTTCT+TGG | - | chr1.1:70873360-70873379 | MS.gene88917:intron | 30.0% |
| AAATCATTCTGCAATCACAG+TGG | + | chr1.1:70870502-70870521 | None:intergenic | 35.0% | |
| AACTCTGTTGTGATTGATAC+TGG | + | chr1.1:70872230-70872249 | None:intergenic | 35.0% | |
| AAGAGAAAGGAAAAGGTAGA+AGG | + | chr1.1:70872525-70872544 | None:intergenic | 35.0% | |
| AAGAGAAGAGATAGAGAGAA+AGG | + | chr1.1:70871243-70871262 | None:intergenic | 35.0% | |
| AAGCATCCAAACATAACACA+AGG | - | chr1.1:70874595-70874614 | MS.gene88917:intron | 35.0% | |
| AAGGGAAAGAAAGAAGAGAA+AGG | + | chr1.1:70871454-70871473 | None:intergenic | 35.0% | |
| AATAGGCACATAGGAGAAAA+AGG | - | chr1.1:70871892-70871911 | MS.gene88917:intron | 35.0% | |
| ACATTTCTCTTTCTCTGGTT+CGG | - | chr1.1:70874120-70874139 | MS.gene88917:intron | 35.0% | |
| AGAGAAAGAAAGTGAGAATC+AGG | + | chr1.1:70869708-70869727 | None:intergenic | 35.0% | |
| AGGGAAAGAAAGAAGAGAAA+GGG | + | chr1.1:70871453-70871472 | None:intergenic | 35.0% | |
| ATACAGTACATCCACTGTTA+TGG | + | chr1.1:70871351-70871370 | None:intergenic | 35.0% | |
| ATAGGCACATAGGAGAAAAA+GGG | - | chr1.1:70871893-70871912 | MS.gene88917:intron | 35.0% | |
| ATTTCGAACATGAATGACCT+TGG | + | chr1.1:70869657-70869676 | None:intergenic | 35.0% | |
| CAAATGAATCATCTTCGTTG+GGG | + | chr1.1:70874701-70874720 | None:intergenic | 35.0% | |
| GAATAACTGGGACAAATGAT+AGG | - | chr1.1:70873583-70873602 | MS.gene88917:CDS | 35.0% | |
| GACAAATGAATCATCTTCGT+TGG | + | chr1.1:70874703-70874722 | None:intergenic | 35.0% | |
| GAGAAAGAAAGTGAGAATCA+GGG | + | chr1.1:70869707-70869726 | None:intergenic | 35.0% | |
| GATTGTAGCCAATCAATTTG+TGG | - | chr1.1:70873239-70873258 | MS.gene88917:CDS | 35.0% | |
| GTAACTAAGAGAATTCGGTT+TGG | + | chr1.1:70871308-70871327 | None:intergenic | 35.0% | |
| GTAGTACTAGTTGTTGTGTT+TGG | - | chr1.1:70874322-70874341 | MS.gene88917:intron | 35.0% | |
| GTCATTCATGTTCGAAATGT+GGG | - | chr1.1:70869659-70869678 | MS.gene88917:CDS | 35.0% | |
| TAACAGTGTCCAAGTACTAA+TGG | + | chr1.1:70871592-70871611 | None:intergenic | 35.0% | |
| TACAGTACATCCACTGTTAT+GGG | + | chr1.1:70871350-70871369 | None:intergenic | 35.0% | |
| TACTTGCTTACGAACTTTGT+AGG | - | chr1.1:70872189-70872208 | MS.gene88917:CDS | 35.0% | |
| TAGCAGCGTTACGATTAAAA+CGG | + | chr1.1:70874657-70874676 | None:intergenic | 35.0% | |
| TAGGGTCGCAATATTTATGA+TGG | - | chr1.1:70872367-70872386 | MS.gene88917:intron | 35.0% | |
| TAGTCGCTTATCAAACAACA+TGG | + | chr1.1:70874560-70874579 | None:intergenic | 35.0% | |
| TCATTCATGTTCGAAATGTG+GGG | - | chr1.1:70869660-70869679 | MS.gene88917:CDS | 35.0% | |
| TCGACATGATTGGATAAGAA+TGG | - | chr1.1:70870327-70870346 | MS.gene88917:intron | 35.0% | |
| TGATCCCTTTGTATATTGTG+TGG | - | chr1.1:70874219-70874238 | MS.gene88917:intron | 35.0% | |
| TGATTGGATAAGAATGGAGT+TGG | - | chr1.1:70870333-70870352 | MS.gene88917:intron | 35.0% | |
| TGGATAAGTGCCTGTAAATA+CGG | + | chr1.1:70870702-70870721 | None:intergenic | 35.0% | |
| TGTGAAATAAATGCCGATCA+TGG | + | chr1.1:70870291-70870310 | None:intergenic | 35.0% | |
| TGTTATGCTACTATGAGAGT+TGG | + | chr1.1:70871853-70871872 | None:intergenic | 35.0% | |
| TTAGGCTGTTACATTTCAGT+GGG | - | chr1.1:70871149-70871168 | MS.gene88917:intron | 35.0% | |
| TTGGCTACAATCGTAAAACT+TGG | + | chr1.1:70873231-70873250 | None:intergenic | 35.0% | |
| TTTCCTGATAAAAAGAGTCC+AGG | + | chr1.1:70869858-70869877 | None:intergenic | 35.0% | |
| ! | AGTTTCTGTTTCTTGGACAA+TGG | - | chr1.1:70873367-70873386 | MS.gene88917:intron | 35.0% |
| ! | ATAAGCATAGTGGTGTCAAT+TGG | - | chr1.1:70871818-70871837 | MS.gene88917:CDS | 35.0% |
| ! | TTCAACTTGTTCTCCCTTTA+TGG | - | chr1.1:70873736-70873755 | MS.gene88917:intron | 35.0% |
| ! | TTGATGGCACTAAACAATGT+TGG | + | chr1.1:70874439-70874458 | None:intergenic | 35.0% |
| !! | AAAGAGAAAGCACTTACATC+AGG | + | chr1.1:70873636-70873655 | None:intergenic | 35.0% |
| !!! | CTTTCTGTTTTTGGCTTTAC+CGG | - | chr1.1:70872291-70872310 | MS.gene88917:intron | 35.0% |
| AAGGAAAAGGTAGAAGGTTG+AGG | + | chr1.1:70872519-70872538 | None:intergenic | 40.0% | |
| AATCTCCCTACAGAACAGAA+AGG | - | chr1.1:70872732-70872751 | MS.gene88917:intron | 40.0% | |
| AATCTGGGTTTGATAGGGAA+AGG | - | chr1.1:70873328-70873347 | MS.gene88917:intron | 40.0% | |
| AATGTGTGAGCCGTATTTAC+AGG | - | chr1.1:70870689-70870708 | MS.gene88917:intron | 40.0% | |
| ACCAAGAGGGTGAATGAAAA+GGG | - | chr1.1:70869828-70869847 | MS.gene88917:CDS | 40.0% | |
| ACTTCGCAAAGATCAATGAG+AGG | + | chr1.1:70872844-70872863 | None:intergenic | 40.0% | |
| AGAGACTGAATCACCTTGAA+CGG | + | chr1.1:70872624-70872643 | None:intergenic | 40.0% | |
| AGATCATGCACTTATCCAGA+TGG | - | chr1.1:70873795-70873814 | MS.gene88917:intron | 40.0% | |
| AGCCAAACGAAACATACTTG+CGG | + | chr1.1:70872765-70872784 | None:intergenic | 40.0% | |
| AGTGTCCAAGTACTAATGGT+GGG | + | chr1.1:70871588-70871607 | None:intergenic | 40.0% | |
| ATAGATCAAAGTCAAGGACG+AGG | - | chr1.1:70870982-70871001 | MS.gene88917:CDS | 40.0% | |
| ATCTGGATAAGTGCATGATC+TGG | + | chr1.1:70873796-70873815 | None:intergenic | 40.0% | |
| ATCTGGGTTTGATAGGGAAA+GGG | - | chr1.1:70873329-70873348 | MS.gene88917:intron | 40.0% | |
| CAATGTGTCAATGTCGTGTT+CGG | - | chr1.1:70870095-70870114 | MS.gene88917:intron | 40.0% | |
| CATCTTCAGTGATGTCTTGT+GGG | + | chr1.1:70874732-70874751 | None:intergenic | 40.0% | |
| CTTACAAAAGCAGGCAGAAT+TGG | - | chr1.1:70871071-70871090 | MS.gene88917:intron | 40.0% | |
| CTTAGGCTGTTACATTTCAG+TGG | - | chr1.1:70871148-70871167 | MS.gene88917:intron | 40.0% | |
| GAACTTGACATTGACCAAGA+GGG | - | chr1.1:70869815-70869834 | MS.gene88917:CDS | 40.0% | |
| GAGATGAATGGGAAGAAACA+AGG | - | chr1.1:70874805-70874824 | MS.gene88917:intron | 40.0% | |
| GATCATGCACTTATCCAGAT+GGG | - | chr1.1:70873796-70873815 | MS.gene88917:CDS | 40.0% | |
| GATGTTACGTGCCAAAAATC+AGG | - | chr1.1:70870564-70870583 | MS.gene88917:intron | 40.0% | |
| GCTCTTGATGAGATGAAAAC+TGG | + | chr1.1:70870954-70870973 | None:intergenic | 40.0% | |
| GGTCATTCATGTTCGAAATG+TGG | - | chr1.1:70869658-70869677 | MS.gene88917:CDS | 40.0% | |
| TACGAACTTTGTAGGCTTTC+AGG | - | chr1.1:70872197-70872216 | MS.gene88917:intron | 40.0% | |
| TCAGCACCTTGTGTTATGTT+TGG | + | chr1.1:70874604-70874623 | None:intergenic | 40.0% | |
| TCATCTTCAGTGATGTCTTG+TGG | + | chr1.1:70874733-70874752 | None:intergenic | 40.0% | |
| TCATCTTCTGTGAAACAGCT+TGG | - | chr1.1:70872898-70872917 | MS.gene88917:intron | 40.0% | |
| TCATTTGTCCCAGTTATTCC+AGG | + | chr1.1:70873582-70873601 | None:intergenic | 40.0% | |
| TCGAATGTAATCACGTGTGT+CGG | + | chr1.1:70870044-70870063 | None:intergenic | 40.0% | |
| TCTGTGAAACAGCTTGGATA+TGG | - | chr1.1:70872904-70872923 | MS.gene88917:intron | 40.0% | |
| TCTGTTCTGTAGGGAGATTT+GGG | + | chr1.1:70872731-70872750 | None:intergenic | 40.0% | |
| TTAAATTTAGCACCTGCCCT+GGG | + | chr1.1:70872967-70872986 | None:intergenic | 40.0% | |
| TTCTGTTCTGTAGGGAGATT+TGG | + | chr1.1:70872732-70872751 | None:intergenic | 40.0% | |
| ! | AGACCTGGACTCTTTTTATC+AGG | - | chr1.1:70869852-70869871 | MS.gene88917:CDS | 40.0% |
| ! | AGCTTTGTGATGACTCCAAA+AGG | + | chr1.1:70870541-70870560 | None:intergenic | 40.0% |
| ! | TGTAAAGCACTAACTGCAGA+AGG | + | chr1.1:70870738-70870757 | None:intergenic | 40.0% |
| ! | TGTCGATTGCTTACAAAAGC+AGG | - | chr1.1:70871062-70871081 | MS.gene88917:intron | 40.0% |
| ! | TTTTTCTCCTCATGGATCTG+TGG | - | chr1.1:70871376-70871395 | MS.gene88917:intron | 40.0% |
| !! | AGCTAAGAGTACCTTATGCT+TGG | + | chr1.1:70870780-70870799 | None:intergenic | 40.0% |
| ACTGGCTGTACACTTTCTGA+AGG | - | chr1.1:70873837-70873856 | MS.gene88917:CDS | 45.0% | |
| AGATGGTTTCCAAGCTGAAC+TGG | - | chr1.1:70873819-70873838 | MS.gene88917:CDS | 45.0% | |
| AGGTAGCATGCTTGCATACA+AGG | + | chr1.1:70874870-70874889 | None:intergenic | 45.0% | |
| AGTGAAAGGACAGCACATCT+AGG | + | chr1.1:70870206-70870225 | None:intergenic | 45.0% | |
| ATCTTCTCCACAGATCCATG+AGG | + | chr1.1:70871386-70871405 | None:intergenic | 45.0% | |
| ATGTATGGTGTTCAGGGTTC+TGG | - | chr1.1:70872940-70872959 | MS.gene88917:intron | 45.0% | |
| CAAACGAAACATACTTGCGG+AGG | + | chr1.1:70872762-70872781 | None:intergenic | 45.0% | |
| CAGAAGGAACGTCTTGCATT+TGG | + | chr1.1:70870722-70870741 | None:intergenic | 45.0% | |
| CAGCTTTCTGTCGACATGAT+TGG | - | chr1.1:70870317-70870336 | MS.gene88917:intron | 45.0% | |
| CAGTGTCCAAGTACTAATGG+TGG | + | chr1.1:70871589-70871608 | None:intergenic | 45.0% | |
| CGAACATGAATGACCTTGGA+AGG | + | chr1.1:70869653-70869672 | None:intergenic | 45.0% | |
| CGACATTGACACATTGACAC+CGG | + | chr1.1:70870091-70870110 | None:intergenic | 45.0% | |
| CTCCGCAAGTATGTTTCGTT+TGG | - | chr1.1:70872760-70872779 | MS.gene88917:intron | 45.0% | |
| CTTCTAATCAAAGCCGTGTC+TGG | - | chr1.1:70870009-70870028 | MS.gene88917:CDS | 45.0% | |
| GACCAAGAGGGTGAATGAAA+AGG | - | chr1.1:70869827-70869846 | MS.gene88917:CDS | 45.0% | |
| GGAACTTGACATTGACCAAG+AGG | - | chr1.1:70869814-70869833 | MS.gene88917:CDS | 45.0% | |
| GGTAGCATGCTTGCATACAA+GGG | + | chr1.1:70874869-70874888 | None:intergenic | 45.0% | |
| GTGAATGAAAAGGGTAGACC+TGG | - | chr1.1:70869837-70869856 | MS.gene88917:CDS | 45.0% | |
| GTGACATTTCAGAAGTCAGC+TGG | - | chr1.1:70871407-70871426 | MS.gene88917:intron | 45.0% | |
| GTTAAATTTAGCACCTGCCC+TGG | + | chr1.1:70872968-70872987 | None:intergenic | 45.0% | |
| GTTTGCCTCCTGGAATAACT+GGG | - | chr1.1:70873571-70873590 | MS.gene88917:intron | 45.0% | |
| TACTCGAGCCATTCAGTGAA+AGG | + | chr1.1:70870220-70870239 | None:intergenic | 45.0% | |
| TACTGCAAGAACTGCACTTC+AGG | - | chr1.1:70872254-70872273 | MS.gene88917:intron | 45.0% | |
| TCTGGGTTTGATAGGGAAAG+GGG | - | chr1.1:70873330-70873349 | MS.gene88917:intron | 45.0% | |
| TCTTCATGTCAGTGCTTCGT+TGG | - | chr1.1:70870162-70870181 | MS.gene88917:intron | 45.0% | |
| TGAAGTCTCTGTGAAAGACG+AGG | + | chr1.1:70872704-70872723 | None:intergenic | 45.0% | |
| TGAGATTGTGACCCTTCTAG+AGG | - | chr1.1:70874750-70874769 | MS.gene88917:intron | 45.0% | |
| TGTGCTGTCCTTTCACTGAA+TGG | - | chr1.1:70870209-70870228 | MS.gene88917:intron | 45.0% | |
| TTATGATGGTTGCTGTCAGC+TGG | - | chr1.1:70872381-70872400 | MS.gene88917:intron | 45.0% | |
| TTTGTCCCAGTTATTCCAGG+AGG | + | chr1.1:70873579-70873598 | None:intergenic | 45.0% | |
| ! | ACCCTTTTCATTCACCCTCT+TGG | + | chr1.1:70869832-70869851 | None:intergenic | 45.0% |
| ! | AGAGTACCTTATGCTTGGCT+GGG | + | chr1.1:70870775-70870794 | None:intergenic | 45.0% |
| ! | AGGAAGCATGTATGGTGTTC+AGG | - | chr1.1:70872933-70872952 | MS.gene88917:intron | 45.0% |
| ! | GGAAGCATGTATGGTGTTCA+GGG | - | chr1.1:70872934-70872953 | MS.gene88917:intron | 45.0% |
| ! | GTGGTGTCAATTGGTTCATG+TGG | - | chr1.1:70871827-70871846 | MS.gene88917:CDS | 45.0% |
| ! | TCAGTTTGAGACTGAGGATC+AGG | - | chr1.1:70874834-70874853 | MS.gene88917:intron | 45.0% |
| !! | AAGAGTACCTTATGCTTGGC+TGG | + | chr1.1:70870776-70870795 | None:intergenic | 45.0% |
| !! | CAAGTACTAATGGTGGGTGT+GGG | + | chr1.1:70871582-70871601 | None:intergenic | 45.0% |
| !! | TGAGAATCAGGGAAGTACCT+CGG | + | chr1.1:70869696-70869715 | None:intergenic | 45.0% |
| !! | AATAAATAAATAAAATGAAA+TGG | + | chr1.1:70870648-70870667 | None:intergenic | 5.0% |
| !!! | AATTTCTTAATTTATTTTAT+TGG | - | chr1.1:70874183-70874202 | MS.gene88917:intron | 5.0% |
| !!! | ATAAATTATTTTCTTAATTT+TGG | - | chr1.1:70873983-70874002 | MS.gene88917:intron | 5.0% |
| AAGCATGCTACCTCGCTTTC+TGG | - | chr1.1:70874877-70874896 | MS.gene88917:intron | 50.0% | |
| AAGTCAAGGACGAGGAGATG+AGG | - | chr1.1:70870990-70871009 | MS.gene88917:CDS | 50.0% | |
| AATTACCGAGCCAGAAAGCG+AGG | + | chr1.1:70874890-70874909 | None:intergenic | 50.0% | |
| ACTGTAGATGCCCAATGCTG+CGG | - | chr1.1:70873524-70873543 | MS.gene88917:intron | 50.0% | |
| AGTGATGTCTTGTGGGAGTG+TGG | + | chr1.1:70874725-70874744 | None:intergenic | 50.0% | |
| AGTGTACAGCCAGTTCAGCT+TGG | + | chr1.1:70873831-70873850 | None:intergenic | 50.0% | |
| CCACACCCACCATTAGTACT+TGG | - | chr1.1:70871580-70871599 | MS.gene88917:intron | 50.0% | |
| CCTCAGTCTCAAACTGAACC+AGG | + | chr1.1:70874831-70874850 | None:intergenic | 50.0% | |
| CGTGCTCTATCCCATAACAG+TGG | - | chr1.1:70871337-70871356 | MS.gene88917:intron | 50.0% | |
| CTCAATGCTGTCCTGCTGTT+TGG | - | chr1.1:70871264-70871283 | MS.gene88917:intron | 50.0% | |
| CTGGAAGGAGGGGGAAAAAA+CGG | + | chr1.1:70873051-70873070 | None:intergenic | 50.0% | |
| CTTGGAAACCATCTCCCATC+TGG | + | chr1.1:70873813-70873832 | None:intergenic | 50.0% | |
| GAAACACCCAGCCAAGCATA+AGG | - | chr1.1:70870766-70870785 | MS.gene88917:CDS | 50.0% | |
| GAATGGGAAGAAACAAGGCC+TGG | - | chr1.1:70874810-70874829 | MS.gene88917:intron | 50.0% | |
| GCACTTATCCAGATGGGAGA+TGG | - | chr1.1:70873802-70873821 | MS.gene88917:CDS | 50.0% | |
| GCCTGCCTTTCTGTTCTGTA+GGG | + | chr1.1:70872740-70872759 | None:intergenic | 50.0% | |
| GGTTTGCCTCCTGGAATAAC+TGG | - | chr1.1:70873570-70873589 | MS.gene88917:intron | 50.0% | |
| GTCCATGCCAGTGCTTTGTA+GGG | - | chr1.1:70870119-70870138 | MS.gene88917:intron | 50.0% | |
| TCCATGCCAGTGCTTTGTAG+GGG | - | chr1.1:70870120-70870139 | MS.gene88917:intron | 50.0% | |
| TCCCTACAGAACAGAAAGGC+AGG | - | chr1.1:70872736-70872755 | MS.gene88917:intron | 50.0% | |
| TGGATATCCGACTGGAAGGA+GGG | + | chr1.1:70873062-70873081 | None:intergenic | 50.0% | |
| TGGTTCCATGCTCCTCTAGA+AGG | + | chr1.1:70874765-70874784 | None:intergenic | 50.0% | |
| TGTCCATGCCAGTGCTTTGT+AGG | - | chr1.1:70870118-70870137 | MS.gene88917:intron | 50.0% | |
| ! | CAGCTTGGATATGGTGATGC+AGG | - | chr1.1:70872913-70872932 | MS.gene88917:intron | 50.0% |
| ! | CCTGGTTCAGTTTGAGACTG+AGG | - | chr1.1:70874828-70874847 | MS.gene88917:intron | 50.0% |
| ! | GGTGATGCAGGAAGCATGTA+TGG | - | chr1.1:70872925-70872944 | MS.gene88917:intron | 50.0% |
| ! | GGTTCCATGCTCCTCTAGAA+GGG | + | chr1.1:70874764-70874783 | None:intergenic | 50.0% |
| ! | GTAATCACGTGTGTCGGTGT+CGG | + | chr1.1:70870038-70870057 | None:intergenic | 50.0% |
| ! | TTTTTCCCCCTCCTTCCAGT+CGG | - | chr1.1:70873052-70873071 | MS.gene88917:intron | 50.0% |
| !! | CCAAGTACTAATGGTGGGTG+TGG | + | chr1.1:70871583-70871602 | None:intergenic | 50.0% |
| !! | CGCTTTCTGGCTCGGTAATT+CGG | - | chr1.1:70874890-70874909 | MS.gene88917:CDS | 50.0% |
| !! | CTGTGTATTGGCTTGGCTTG+TGG | - | chr1.1:70872446-70872465 | MS.gene88917:intron | 50.0% |
| CAAGGACGAGGAGATGAGGT+TGG | - | chr1.1:70870994-70871013 | MS.gene88917:CDS | 55.0% | |
| CACACACCCCTACAAAGCAC+TGG | + | chr1.1:70870129-70870148 | None:intergenic | 55.0% | |
| CCTGTGGATATCCGACTGGA+AGG | + | chr1.1:70873066-70873085 | None:intergenic | 55.0% | |
| CCTTCCAGTCGGATATCCAC+AGG | - | chr1.1:70873063-70873082 | MS.gene88917:intron | 55.0% | |
| CTCACCTGTGGATATCCGAC+TGG | + | chr1.1:70873070-70873089 | None:intergenic | 55.0% | |
| GATATCCGACTGGAAGGAGG+GGG | + | chr1.1:70873060-70873079 | None:intergenic | 55.0% | |
| GGATATCCGACTGGAAGGAG+GGG | + | chr1.1:70873061-70873080 | None:intergenic | 55.0% | |
| GGCCTGCCTTTCTGTTCTGT+AGG | + | chr1.1:70872741-70872760 | None:intergenic | 55.0% | |
| GGTTTGGCTGTGCATCCAGA+GGG | + | chr1.1:70871292-70871311 | None:intergenic | 55.0% | |
| GTGGATATCCGACTGGAAGG+AGG | + | chr1.1:70873063-70873082 | None:intergenic | 55.0% | |
| TCCAGAGGGTTCCAAACAGC+AGG | + | chr1.1:70871278-70871297 | None:intergenic | 55.0% | |
| TCCCCCAAAAGCAGCTGCAA+TGG | + | chr1.1:70873550-70873569 | None:intergenic | 55.0% | |
| TCGTTGGGGAGCAGCAATAG+CGG | + | chr1.1:70874687-70874706 | None:intergenic | 55.0% | |
| TGTGGGGCACGAAATATCCG+AGG | - | chr1.1:70869676-70869695 | MS.gene88917:CDS | 55.0% | |
| ! | GTGACCCTTCTAGAGGAGCA+TGG | - | chr1.1:70874757-70874776 | MS.gene88917:intron | 55.0% |
| ! | TCCTGCTGTTTGGAACCCTC+TGG | - | chr1.1:70871274-70871293 | MS.gene88917:intron | 55.0% |
| !! | ACCCCTACAAAGCACTGGCA+TGG | + | chr1.1:70870124-70870143 | None:intergenic | 55.0% |
| !! | TGCTACCTCGCTTTCTGGCT+CGG | - | chr1.1:70874882-70874901 | MS.gene88917:intron | 55.0% |
| !! | TGTTCAGGGTTCTGGACCCA+GGG | - | chr1.1:70872948-70872967 | MS.gene88917:intron | 55.0% |
| !!! | ATTGCAGCTGCTTTTGGGGG+AGG | - | chr1.1:70873549-70873568 | MS.gene88917:intron | 55.0% |
| !!! | CGGCCATTGCAGCTGCTTTT+GGG | - | chr1.1:70873544-70873563 | MS.gene88917:intron | 55.0% |
| !!! | GCCATTGCAGCTGCTTTTGG+GGG | - | chr1.1:70873546-70873565 | MS.gene88917:intron | 55.0% |
| !!! | GGCCATTGCAGCTGCTTTTG+GGG | - | chr1.1:70873545-70873564 | MS.gene88917:intron | 55.0% |
| AGCTGCAATGGCCGCAGCAT+TGG | + | chr1.1:70873538-70873557 | None:intergenic | 60.0% | |
| GAGTGCACGAGCATGGGTGT+GGG | + | chr1.1:70871560-70871579 | None:intergenic | 60.0% | |
| GCTGCAATGGCCGCAGCATT+GGG | + | chr1.1:70873537-70873556 | None:intergenic | 60.0% | |
| TTTGGGGGAGGTTTGCCTCC+TGG | - | chr1.1:70873561-70873580 | MS.gene88917:intron | 60.0% | |
| ! | CGGTTTGGCTGTGCATCCAG+AGG | + | chr1.1:70871293-70871312 | None:intergenic | 60.0% |
| ! | GTGTGGGAGTGCACGAGCAT+GGG | + | chr1.1:70871566-70871585 | None:intergenic | 60.0% |
| !! | GCGGCCATTGCAGCTGCTTT+TGG | - | chr1.1:70873543-70873562 | MS.gene88917:intron | 60.0% |
| !! | GTGTTCAGGGTTCTGGACCC+AGG | - | chr1.1:70872947-70872966 | MS.gene88917:intron | 60.0% |
| !! | TCGGTGTCGGACACCAGACA+CGG | + | chr1.1:70870025-70870044 | None:intergenic | 60.0% |
| GGAGTGCACGAGCATGGGTG+TGG | + | chr1.1:70871561-70871580 | None:intergenic | 65.0% | |
| ! | GGTGTGGGAGTGCACGAGCA+TGG | + | chr1.1:70871567-70871586 | None:intergenic | 65.0% |
| !! | CAGGGTTCTGGACCCAGGGC+AGG | - | chr1.1:70872952-70872971 | MS.gene88917:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 70869641 | 70874942 | 70869641 | ID=MS.gene88917 |
| chr1.1 | mRNA | 70869641 | 70874942 | 70869641 | ID=MS.gene88917.t1;Parent=MS.gene88917 |
| chr1.1 | exon | 70874886 | 70874942 | 70874886 | ID=MS.gene88917.t1.exon1;Parent=MS.gene88917.t1 |
| chr1.1 | CDS | 70874886 | 70874942 | 70874886 | ID=cds.MS.gene88917.t1;Parent=MS.gene88917.t1 |
| chr1.1 | exon | 70873998 | 70874069 | 70873998 | ID=MS.gene88917.t1.exon2;Parent=MS.gene88917.t1 |
| chr1.1 | CDS | 70873998 | 70874069 | 70873998 | ID=cds.MS.gene88917.t1;Parent=MS.gene88917.t1 |
| chr1.1 | exon | 70873796 | 70873872 | 70873796 | ID=MS.gene88917.t1.exon3;Parent=MS.gene88917.t1 |
| chr1.1 | CDS | 70873796 | 70873872 | 70873796 | ID=cds.MS.gene88917.t1;Parent=MS.gene88917.t1 |
| chr1.1 | exon | 70873572 | 70873650 | 70873572 | ID=MS.gene88917.t1.exon4;Parent=MS.gene88917.t1 |
| chr1.1 | CDS | 70873572 | 70873650 | 70873572 | ID=cds.MS.gene88917.t1;Parent=MS.gene88917.t1 |
| chr1.1 | exon | 70873155 | 70873278 | 70873155 | ID=MS.gene88917.t1.exon5;Parent=MS.gene88917.t1 |
| chr1.1 | CDS | 70873155 | 70873278 | 70873155 | ID=cds.MS.gene88917.t1;Parent=MS.gene88917.t1 |
| chr1.1 | exon | 70872308 | 70872372 | 70872308 | ID=MS.gene88917.t1.exon6;Parent=MS.gene88917.t1 |
| chr1.1 | CDS | 70872308 | 70872372 | 70872308 | ID=cds.MS.gene88917.t1;Parent=MS.gene88917.t1 |
| chr1.1 | exon | 70872164 | 70872213 | 70872164 | ID=MS.gene88917.t1.exon7;Parent=MS.gene88917.t1 |
| chr1.1 | CDS | 70872164 | 70872213 | 70872164 | ID=cds.MS.gene88917.t1;Parent=MS.gene88917.t1 |
| chr1.1 | exon | 70871954 | 70871995 | 70871954 | ID=MS.gene88917.t1.exon8;Parent=MS.gene88917.t1 |
| chr1.1 | CDS | 70871954 | 70871995 | 70871954 | ID=cds.MS.gene88917.t1;Parent=MS.gene88917.t1 |
| chr1.1 | exon | 70871816 | 70871867 | 70871816 | ID=MS.gene88917.t1.exon9;Parent=MS.gene88917.t1 |
| chr1.1 | CDS | 70871816 | 70871867 | 70871816 | ID=cds.MS.gene88917.t1;Parent=MS.gene88917.t1 |
| chr1.1 | exon | 70871610 | 70871667 | 70871610 | ID=MS.gene88917.t1.exon10;Parent=MS.gene88917.t1 |
| chr1.1 | CDS | 70871610 | 70871667 | 70871610 | ID=cds.MS.gene88917.t1;Parent=MS.gene88917.t1 |
| chr1.1 | exon | 70871499 | 70871512 | 70871499 | ID=MS.gene88917.t1.exon11;Parent=MS.gene88917.t1 |
| chr1.1 | CDS | 70871499 | 70871512 | 70871499 | ID=cds.MS.gene88917.t1;Parent=MS.gene88917.t1 |
| chr1.1 | exon | 70870945 | 70871052 | 70870945 | ID=MS.gene88917.t1.exon12;Parent=MS.gene88917.t1 |
| chr1.1 | CDS | 70870945 | 70871052 | 70870945 | ID=cds.MS.gene88917.t1;Parent=MS.gene88917.t1 |
| chr1.1 | exon | 70870725 | 70870868 | 70870725 | ID=MS.gene88917.t1.exon13;Parent=MS.gene88917.t1 |
| chr1.1 | CDS | 70870725 | 70870868 | 70870725 | ID=cds.MS.gene88917.t1;Parent=MS.gene88917.t1 |
| chr1.1 | exon | 70869641 | 70870030 | 70869641 | ID=MS.gene88917.t1.exon14;Parent=MS.gene88917.t1 |
| chr1.1 | CDS | 70869641 | 70870030 | 70869641 | ID=cds.MS.gene88917.t1;Parent=MS.gene88917.t1 |
| Gene Sequence |
| Protein sequence |
