AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene90259

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene90259.t1 MTR_4g092920 98.815 675 8 0 1 675 1 675 0.0 1352
MS.gene90259.t1 MTR_2g010020 90.342 673 63 2 3 675 6 676 0.0 1216
MS.gene90259.t1 MTR_2g010020 90.208 674 63 3 3 675 6 677 0.0 1211
MS.gene90259.t1 MTR_4g092920 98.706 541 7 0 135 675 1 541 0.0 1079
MS.gene90259.t1 MTR_2g005690 54.743 643 286 3 27 666 45 685 0.0 696
MS.gene90259.t1 MTR_8g099945 53.448 580 244 10 53 614 38 609 0.0 581
MS.gene90259.t1 MTR_8g099795 53.448 580 244 10 53 614 38 609 0.0 579
MS.gene90259.t1 MTR_4g063710 49.298 641 283 12 54 659 10 643 0.0 570
MS.gene90259.t1 MTR_4g063720 52.422 578 249 9 54 612 10 580 0.0 568
MS.gene90259.t1 MTR_7g024580 49.383 648 291 11 54 673 10 648 0.0 567
MS.gene90259.t1 MTR_7g099680 49.373 638 287 11 54 662 10 640 0.0 567
MS.gene90259.t1 MTR_7g024390 52.249 578 250 9 54 612 10 580 0.0 567
MS.gene90259.t1 MTR_4g130540 50.081 621 281 10 54 652 9 622 0.0 567
MS.gene90259.t1 MTR_2g017730 45.183 602 293 13 51 630 6 592 2.26e-163 483
MS.gene90259.t1 MTR_7g025770 46.769 588 285 13 46 613 2 581 4.21e-162 480
MS.gene90259.t1 MTR_7g451380 46.299 581 281 12 54 612 10 581 5.28e-161 477
MS.gene90259.t1 MTR_7g026090 44.020 602 305 11 54 629 10 605 8.26e-161 476
MS.gene90259.t1 MTR_7g025760 45.552 562 276 10 54 595 10 561 2.73e-160 475
MS.gene90259.t1 MTR_2g038260 44.828 580 292 12 54 613 10 581 8.87e-159 471
MS.gene90259.t1 MTR_7g021440 45.675 578 290 11 54 613 10 581 2.81e-157 468
MS.gene90259.t1 MTR_8g032650 46.057 558 278 11 54 595 10 560 1.03e-156 466
MS.gene90259.t1 MTR_7g026170 45.189 582 287 14 54 613 10 581 2.76e-156 465
MS.gene90259.t1 MTR_7g026030 45.161 558 283 11 54 595 10 560 5.86e-156 464
MS.gene90259.t1 MTR_6g033760 44.345 557 289 9 54 595 10 560 7.18e-156 464
MS.gene90259.t1 MTR_4g079590 45.876 582 283 14 54 613 10 581 3.87e-155 462
MS.gene90259.t1 MTR_2g032550 44.538 595 294 13 54 626 11 591 6.12e-154 459
MS.gene90259.t1 MTR_7g025620 43.486 591 309 12 54 626 10 593 7.78e-154 459
MS.gene90259.t1 MTR_5g066800 42.810 612 292 14 54 634 10 594 3.84e-153 457
MS.gene90259.t1 MTR_7g025790 44.624 558 286 10 54 595 10 560 9.09e-152 453
MS.gene90259.t1 MTR_7g029415 46.359 563 269 15 52 593 15 565 1.28e-151 453
MS.gene90259.t1 MTR_7g025720 45.144 556 282 10 54 593 10 558 5.72e-151 451
MS.gene90259.t1 MTR_7g025820 44.821 560 283 10 54 595 10 561 1.29e-150 450
MS.gene90259.t1 MTR_7g011590 45.946 555 267 13 54 593 10 546 9.12e-150 447
MS.gene90259.t1 MTR_7g025740 44.092 567 285 13 54 595 10 569 4.19e-149 447
MS.gene90259.t1 MTR_7g024030 45.161 558 283 11 54 595 10 560 4.68e-149 446
MS.gene90259.t1 MTR_2g022050 45.455 583 279 12 54 606 10 583 4.98e-149 446
MS.gene90259.t1 MTR_7g026110 43.067 613 320 15 54 647 10 612 1.08e-148 445
MS.gene90259.t1 MTR_6g033850 43.627 557 293 9 54 595 10 560 3.26e-148 446
MS.gene90259.t1 MTR_2g437440 42.761 594 288 13 54 626 10 572 1.03e-147 442
MS.gene90259.t1 MTR_7g078190 43.929 560 289 12 54 595 10 562 1.57e-145 437
MS.gene90259.t1 MTR_7g025630 43.063 555 285 12 54 595 10 546 6.43e-144 432
MS.gene90259.t1 MTR_7g074460 43.885 556 272 11 54 593 10 541 1.41e-143 431
MS.gene90259.t1 MTR_2g038270 42.785 596 306 15 46 613 2 590 2.23e-142 429
MS.gene90259.t1 MTR_7g026130 46.857 525 244 13 40 544 1 510 5.21e-142 431
MS.gene90259.t1 MTR_6g033820 40.925 562 306 9 54 595 10 565 1.09e-141 429
MS.gene90259.t1 MTR_6g033955 41.459 562 303 9 54 595 10 565 1.32e-141 428
MS.gene90259.t1 MTR_6g033870 41.509 583 310 12 54 612 11 586 3.11e-141 428
MS.gene90259.t1 MTR_4g027145 41.990 593 302 15 54 613 10 593 1.64e-140 425
MS.gene90259.t1 MTR_8g103930 40.659 637 319 19 40 645 1 609 6.35e-139 420
MS.gene90259.t1 MTR_2g032580 41.696 578 283 10 54 613 10 551 9.58e-139 419
MS.gene90259.t1 MTR_7g078210 43.828 559 290 12 54 595 10 561 1.48e-138 419
MS.gene90259.t1 MTR_1g017130 41.897 580 269 16 54 613 10 541 2.01e-137 416
MS.gene90259.t1 MTR_7g026140 43.672 561 268 17 54 593 10 543 3.64e-137 416
MS.gene90259.t1 MTR_7g025260 44.338 521 269 9 91 595 18 533 2.23e-135 410
MS.gene90259.t1 MTR_7g451360 42.626 556 239 14 54 593 10 501 3.41e-130 396
MS.gene90259.t1 MTR_7g035155 40.587 579 264 16 54 613 10 527 5.53e-123 377
MS.gene90259.t1 MTR_7g007000 40.860 558 261 14 54 593 10 516 9.27e-120 370
MS.gene90259.t1 MTR_6g033800 42.405 474 255 8 135 595 1 469 1.10e-118 367
MS.gene90259.t1 MTR_2g040370 48.346 393 186 6 43 425 1019 1404 1.70e-104 350
MS.gene90259.t1 MTR_2g040370 47.475 396 188 8 54 436 1414 1802 1.92e-94 320
MS.gene90259.t1 MTR_2g040370 48.346 393 186 6 43 425 1019 1404 1.94e-104 349
MS.gene90259.t1 MTR_2g040370 47.792 385 183 7 54 427 1414 1791 8.52e-95 322
MS.gene90259.t1 MTR_2g040160 46.770 387 189 6 54 430 1110 1489 1.58e-102 342
MS.gene90259.t1 MTR_2g040260 46.753 385 192 5 54 430 1039 1418 1.59e-101 340
MS.gene90259.t1 MTR_2g032160 45.576 373 182 7 54 412 10 375 2.81e-100 315
MS.gene90259.t1 MTR_1g041565 37.651 579 268 18 52 613 4 506 1.59e-98 313
MS.gene90259.t1 MTR_2g040350 43.439 442 212 12 10 430 780 1204 1.96e-96 323
MS.gene90259.t1 MTR_2g040350 43.439 442 212 12 10 430 998 1422 6.96e-96 323
MS.gene90259.t1 MTR_2g040220 45.407 381 187 7 54 420 1019 1392 8.20e-91 310
MS.gene90259.t1 MTR_2g040220 47.475 99 44 1 481 571 1397 1495 8.14e-18 89.0
MS.gene90259.t1 MTR_6g034005 36.266 466 272 10 125 577 2 455 5.61e-88 290
MS.gene90259.t1 MTR_1g077230 50.365 274 124 4 54 316 10 282 1.72e-85 270
MS.gene90259.t1 MTR_4g063720 45.029 342 164 7 342 659 231 572 2.58e-83 274
MS.gene90259.t1 MTR_4g063720 55.556 216 86 3 54 260 10 224 1.94e-69 237
MS.gene90259.t1 MTR_7g026080 51.220 246 108 5 46 280 2 246 2.03e-72 235
MS.gene90259.t1 MTR_3g051300 33.990 406 251 6 53 446 3 403 1.51e-67 236
MS.gene90259.t1 MTR_4g012050 32.598 408 258 5 53 448 3 405 4.85e-66 233
MS.gene90259.t1 MTR_2g102180 31.683 404 259 6 53 444 3 401 4.03e-63 225
MS.gene90259.t1 MTR_5g006180 28.860 544 303 13 29 529 5 507 8.16e-63 219
MS.gene90259.t1 MTR_5g092570 31.640 433 270 7 53 466 3 428 3.86e-62 221
MS.gene90259.t1 MTR_4g088515 34.945 455 201 13 27 471 250 619 6.77e-62 218
MS.gene90259.t1 MTR_6g033855 35.673 342 134 4 156 494 39 297 1.45e-59 203
MS.gene90259.t1 MTR_2g031670 46.781 233 110 4 65 284 45 276 3.94e-59 202
MS.gene90259.t1 MTR_6g033810 38.333 300 133 5 156 450 39 291 1.90e-53 186
MS.gene90259.t1 MTR_7g026050 37.101 345 173 9 279 613 1 311 8.98e-53 186
MS.gene90259.t1 MTR_1207s0010 51.807 166 76 1 156 317 10 175 2.99e-51 176
MS.gene90259.t1 MTR_4g107920 29.771 524 316 15 38 531 5 506 2.48e-50 184
MS.gene90259.t1 MTR_4g115780 30.361 527 324 12 48 540 135 652 4.77e-48 180
MS.gene90259.t1 MTR_5g090110 27.586 493 293 12 54 517 29 486 3.70e-47 175
MS.gene90259.t1 MTR_1g077240 43.600 250 124 7 365 602 6 250 1.14e-42 156
MS.gene90259.t1 MTR_5g097190 38.333 240 99 6 54 287 159 355 3.21e-42 157
MS.gene90259.t1 MTR_6g478100 38.498 213 107 4 80 283 10 207 3.38e-40 150
MS.gene90259.t1 MTR_3g081170 29.017 417 263 11 40 430 15 424 5.83e-38 151
MS.gene90259.t1 MTR_7g026180 50.427 117 54 1 121 233 23 139 2.03e-32 128
MS.gene90259.t1 MTR_5g005870 31.381 239 159 5 339 573 71 308 2.90e-31 127
MS.gene90259.t1 MTR_6g033910 34.742 213 89 4 107 313 9 177 2.99e-31 120
MS.gene90259.t1 MTR_7g074540 46.099 141 74 2 454 593 4 143 9.03e-31 120
MS.gene90259.t1 MTR_7g451390 44.099 161 77 6 471 626 10 162 2.32e-26 107
MS.gene90259.t1 MTR_2g017710 32.950 261 83 8 261 515 19 193 4.20e-23 100
MS.gene90259.t1 MTR_1g116250 33.913 230 106 8 402 626 73 261 1.31e-21 96.3
MS.gene90259.t1 MTR_1g068900 41.429 140 73 5 461 595 23 158 6.70e-20 87.8
MS.gene90259.t1 MTR_4g115860 45.652 92 50 0 432 523 30 121 5.30e-19 84.0
MS.gene90259.t1 MTR_5g005890 29.493 217 95 6 119 326 7 174 1.36e-18 84.7
MS.gene90259.t1 MTR_2g040355 31.492 181 79 3 401 580 92 228 4.55e-14 73.9
MS.gene90259.t1 MTR_6g033805 50.000 64 31 1 54 117 10 72 1.41e-13 66.6
MS.gene90259.t1 MTR_4g027235 50.746 67 30 2 54 118 10 75 1.04e-12 64.3
MS.gene90259.t1 MTR_4g027085 50.746 67 30 2 54 118 10 75 1.04e-12 64.3
MS.gene90259.t1 MTR_2g040375 60.000 55 22 0 433 487 51 105 2.74e-12 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene90259.t1 AT5G09590 83.505 679 107 2 2 675 4 682 0.0 1142
MS.gene90259.t1 AT4G37910 82.169 673 116 2 3 672 5 676 0.0 1090
MS.gene90259.t1 AT4G37910 82.169 673 116 2 3 672 5 676 0.0 1090
MS.gene90259.t1 AT4G24280 57.877 603 247 4 47 645 74 673 0.0 693
MS.gene90259.t1 AT5G49910 56.774 620 261 4 47 663 74 689 0.0 692
MS.gene90259.t1 AT5G42020 54.301 558 232 9 53 595 37 586 0.0 582
MS.gene90259.t1 AT5G42020 54.301 558 232 9 53 595 42 591 0.0 581
MS.gene90259.t1 AT5G28540 54.301 558 232 9 53 595 37 586 0.0 579
MS.gene90259.t1 AT5G02500 51.171 598 267 10 54 631 10 602 0.0 569
MS.gene90259.t1 AT3G12580 49.525 632 283 12 54 661 10 629 0.0 566
MS.gene90259.t1 AT3G09440 51.903 578 252 9 54 612 10 580 0.0 562
MS.gene90259.t1 AT3G09440 51.903 578 252 9 54 612 10 580 0.0 562
MS.gene90259.t1 AT3G09440 51.903 578 252 9 54 612 10 580 0.0 562
MS.gene90259.t1 AT3G09440 51.903 578 252 9 54 612 10 580 0.0 562
MS.gene90259.t1 AT1G16030 48.896 634 288 11 54 663 9 630 0.0 562
MS.gene90259.t1 AT1G56410 49.431 615 284 10 54 648 10 617 0.0 560
MS.gene90259.t1 AT5G02490 48.860 614 285 10 54 643 10 618 0.0 560
MS.gene90259.t1 AT1G09080 52.900 569 245 10 53 607 42 601 0.0 555
MS.gene90259.t1 AT1G09080 52.900 569 245 10 53 607 52 611 0.0 555
MS.gene90259.t1 AT5G42020 55.967 486 191 9 53 523 37 514 4.08e-177 518
MS.gene90259.t1 AT5G02500 50.895 391 177 6 54 434 10 395 3.34e-124 379
MS.gene90259.t1 AT1G79930 32.274 409 260 5 53 449 3 406 5.77e-67 235
MS.gene90259.t1 AT1G79930 32.274 409 260 5 53 449 3 406 8.39e-67 235
MS.gene90259.t1 AT1G79920 32.029 409 261 5 53 449 3 406 1.00e-66 233
MS.gene90259.t1 AT1G79920 32.029 409 261 5 53 449 3 406 1.00e-66 233
MS.gene90259.t1 AT1G79920 32.029 409 261 5 53 449 3 406 1.00e-66 233
MS.gene90259.t1 AT1G79920 32.029 409 261 5 53 449 3 406 1.28e-66 233
MS.gene90259.t1 AT2G32120 30.502 518 304 12 45 531 21 513 1.03e-65 227
MS.gene90259.t1 AT2G32120 30.502 518 304 12 45 531 21 513 1.03e-65 227
MS.gene90259.t1 AT1G11660 31.220 410 264 5 53 449 3 407 7.07e-62 220
MS.gene90259.t1 AT1G11660 31.220 410 264 5 53 449 3 407 7.07e-62 220
MS.gene90259.t1 AT1G11660 31.220 410 264 5 53 449 3 407 7.07e-62 220
MS.gene90259.t1 AT1G11660 31.467 375 239 5 88 449 1 370 9.31e-55 200
MS.gene90259.t1 AT4G16660 27.571 457 291 11 48 469 21 472 1.98e-42 165
MS.gene90259.t1 AT4G16660 27.571 457 291 11 48 469 45 496 2.23e-42 165
MS.gene90259.t1 AT4G32208 69.444 108 32 1 569 675 46 153 1.33e-35 132

Find 177 sgRNAs with CRISPR-Local

Find 271 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAATTCATGTGTTTCTTTAA+TGG 0.139612 4.2:+20216553 MS.gene90259:CDS
CAACAAGCAGCTCTCCTTTC+TGG 0.152574 4.2:-20216730 None:intergenic
CAAGTTTGGCTCGACCTTTC+AGG 0.154885 4.2:+20216395 MS.gene90259:CDS
ACCGTTTGAAATTTCTAAAA+TGG 0.216877 4.2:-20217203 None:intergenic
TGCAATGGGAGCAGCTCTTC+AGG 0.222059 4.2:+20217787 MS.gene90259:CDS
GGGTGCCTTGACAATCTTAT+AGG 0.230055 4.2:-20216870 None:intergenic
TCAGAATTCTCAATAACTTT+AGG 0.250981 4.2:-20216671 None:intergenic
ATCTTTCAAGCAGCTCTTAC+AGG 0.256743 4.2:-20217630 None:intergenic
TAAGAACAAAAGCACCAATT+TGG 0.281100 4.2:-20216940 None:intergenic
AGCTCAAAAGTGGGCAAGTT+TGG 0.290535 4.2:+20216381 MS.gene90259:CDS
ATTACCTGACTCTTCTTTGT+AGG 0.299624 4.2:-20217929 None:intergenic
GAAACCACCTCCTGCACTTT+AGG 0.305254 4.2:-20217713 None:intergenic
TAGATCGAAGTTTGAGGCTT+TGG 0.315791 4.2:+20217577 MS.gene90259:CDS
AAAGAGTTTGAGCGAGTATA+GGG 0.317690 4.2:+20218921 MS.gene90259:CDS
TGATGTTATTGGAATTGATT+TGG 0.319512 4.2:+20216523 MS.gene90259:CDS
TACCAATGGTGACACTTTCT+TGG 0.320696 4.2:+20217334 MS.gene90259:CDS
AAAAGAGTTTGAGCGAGTAT+AGG 0.348496 4.2:+20218920 MS.gene90259:CDS
ACTGCAGCTGCACTTTCATA+TGG 0.352369 4.2:+20217118 MS.gene90259:CDS
CAATCTGAGGCAAACCTCTT+GGG 0.354482 4.2:-20218675 None:intergenic
ATCCCTGGGTATTGAGACTT+TGG 0.357413 4.2:+20217865 MS.gene90259:CDS
CTTGGAGAATTTGACCTTGT+TGG 0.357711 4.2:+20218640 MS.gene90259:CDS
AGATGATGAAATTAATAATA+TGG 0.357883 4.2:+20218804 MS.gene90259:CDS
AAAGATGCTGGTAGAATTGC+CGG 0.362237 4.2:+20217064 MS.gene90259:CDS
TCCTCTGATGGAGGTTCTCC+AGG 0.365670 4.2:+20219108 MS.gene90259:CDS
GAGGTGGTTTCAGAGATCTT+TGG 0.369528 4.2:+20217725 MS.gene90259:CDS
CAGTATTCTCCCAGCCAAAT+TGG 0.369640 4.2:+20216926 MS.gene90259:CDS
AACACAAAAGGAGATGAAAA+TGG 0.372682 4.2:+20216844 MS.gene90259:CDS
GATGTTATTGGAATTGATTT+GGG 0.373282 4.2:+20216524 MS.gene90259:CDS
TTCTCCAGGTGGTGGTGAAC+AGG 0.375092 4.2:+20219122 MS.gene90259:CDS
CCTGCTGGTAGTGATGTTAT+TGG 0.376880 4.2:+20216512 MS.gene90259:CDS
GGTGCCTTGACAATCTTATA+GGG 0.378876 4.2:-20216869 None:intergenic
TCCCTGGGTATTGAGACTTT+GGG 0.389902 4.2:+20217866 MS.gene90259:CDS
GTGCCTTTGTCCTTTCAATC+AGG 0.391952 4.2:-20217607 None:intergenic
CAGCTCTCCTTTCTGGTTGA+AGG 0.397732 4.2:-20216723 None:intergenic
CATTAAAGAAACACATGAAT+TGG 0.405929 4.2:-20216552 None:intergenic
ACCTCTTCATACTCTGCCTC+TGG 0.409681 4.2:-20219147 None:intergenic
TGTAGGAATTGTTGTGTTGC+GGG 0.416658 4.2:-20217912 None:intergenic
CAGCCATTTCACGCTCCCCT+TGG 0.422244 4.2:-20218603 None:intergenic
CAGATTACCATCCGCTCATC+AGG 0.424767 4.2:+20218772 MS.gene90259:CDS
GGGATAGAGGAGTGACATCT+AGG 0.427451 4.2:-20217847 None:intergenic
CAAGATCGCGGCGGAGAGCA+CGG 0.429764 4.2:-20215718 None:intergenic
AGATGTCACTCCTCTATCCC+TGG 0.430112 4.2:+20217850 MS.gene90259:CDS
ACCAATGGTGACACTTTCTT+GGG 0.432955 4.2:+20217335 MS.gene90259:CDS
TCAATCTGAGGCAAACCTCT+TGG 0.435495 4.2:-20218676 None:intergenic
GCTCCAAGGGGAGCGTGAAA+TGG 0.435720 4.2:+20218600 MS.gene90259:CDS
CCCATTGCAACAGCCTCATC+AGG 0.435835 4.2:-20217773 None:intergenic
TTTGGCACCAAACGTTTGAT+TGG 0.438874 4.2:+20216800 MS.gene90259:CDS
GCACCAAACGTTTGATTGGT+AGG 0.443834 4.2:+20216804 MS.gene90259:CDS
AACAAAAGCACCAATTTGGC+TGG 0.450750 4.2:-20216936 None:intergenic
AACAAAGCCGTGTCAAAGAT+TGG 0.451841 4.2:+20219054 MS.gene90259:CDS
CTCTGTCTCTGCCTTTCGAT+CGG 0.453056 4.2:+20215748 MS.gene90259:CDS
TTCATCACTGCTGATGCATC+CGG 0.456355 4.2:+20217527 MS.gene90259:CDS
TTCAACCCATGCATCTCCAT+TGG 0.460739 4.2:-20216891 None:intergenic
TCAACCCATGCATCTCCATT+GGG 0.462137 4.2:-20216890 None:intergenic
GCGCCTACCAATCAAACGTT+TGG 0.472555 4.2:-20216807 None:intergenic
ATTTCCTTCGCAACCTCACT+AGG 0.475574 4.2:-20218952 None:intergenic
CAGAAAGGAGAGCTGCTTGT+TGG 0.476199 4.2:+20216731 MS.gene90259:CDS
GTTGACTAGATCGAAGTTTG+AGG 0.481396 4.2:+20217571 MS.gene90259:CDS
AACATCCTTGATAGATATGT+TGG 0.482621 4.2:-20217654 None:intergenic
TGGTACACCTGCCAAGCGTC+AGG 0.482660 4.2:+20216751 MS.gene90259:CDS
AATTTCAAACGGTGTATTTG+AGG 0.485239 4.2:+20217213 MS.gene90259:CDS
TCAAGTGGAGGTTCCTCTGA+TGG 0.485714 4.2:+20219096 MS.gene90259:CDS
GTCTCAATACCCAGGGATAG+AGG 0.485922 4.2:-20217860 None:intergenic
TACTACAGTTCTAGGCCTGC+TGG 0.490672 4.2:+20216497 MS.gene90259:intron
CTGCAGCTGCACTTTCATAT+GGG 0.491179 4.2:+20217119 MS.gene90259:CDS
GCAATGGGAGCAGCTCTTCA+GGG 0.497054 4.2:+20217788 MS.gene90259:CDS
GTTACAGCCTGACGCTTGGC+AGG 0.501358 4.2:-20216758 None:intergenic
CTTCAATGATGCTCAGAGGC+AGG 0.501906 4.2:+20217036 MS.gene90259:CDS
AGATGCCAACATATCTATCA+AGG 0.510131 4.2:+20217649 MS.gene90259:CDS
TGATGATCCGCAAACACAAA+AGG 0.515016 4.2:+20216832 MS.gene90259:CDS
TGAGGCAAACCTCTTGGGGC+AGG 0.516215 4.2:-20218670 None:intergenic
AATTCCTACAAAGAAGAGTC+AGG 0.516535 4.2:+20217925 MS.gene90259:CDS
AAGATTGGTCAGCATATGTC+AGG 0.517534 4.2:+20219069 MS.gene90259:CDS
TGAGCATCATTGAAGTAAGC+TGG 0.518266 4.2:-20217028 None:intergenic
TGGTAAATAACCTGATTGAA+AGG 0.518643 4.2:+20217597 MS.gene90259:CDS
GAGAGCACGGCGCAAGACGG+CGG 0.518714 4.2:-20215705 None:intergenic
TGTTTCTTTAATGGAGGGAA+AGG 0.519248 4.2:+20216562 MS.gene90259:CDS
TCAGGATTTACTCCTTTGCT+AGG 0.519309 4.2:-20217755 None:intergenic
GCGGAGAGCACGGCGCAAGA+CGG 0.519906 4.2:-20215708 None:intergenic
TCATGTGTTTCTTTAATGGA+GGG 0.521862 4.2:+20216557 MS.gene90259:CDS
GCTGCAGACAACAAGAGTCT+TGG 0.523262 4.2:+20218622 MS.gene90259:CDS
TTCATGTGTTTCTTTAATGG+AGG 0.523829 4.2:+20216556 MS.gene90259:CDS
TCAGACTCAAGTGGGTATCA+AGG 0.524218 4.2:+20218576 MS.gene90259:CDS
ATGAGGTTCTTCTCGTCGGA+GGG 0.525590 4.2:+20217678 MS.gene90259:CDS
GAAACTGCTGAGGCATACCT+TGG 0.527311 4.2:+20216974 MS.gene90259:CDS
CATCATATGCAGCTCAAAAG+TGG 0.528387 4.2:+20216371 MS.gene90259:CDS
TCCTGATGAGGCTGTTGCAA+TGG 0.529665 4.2:+20217772 MS.gene90259:CDS
GTTGCATGCTCAGAGAGATC+AGG 0.532569 4.2:+20218840 MS.gene90259:CDS
GATTTGAGAACGGCTATAGC+AGG 0.533055 4.2:+20218991 MS.gene90259:CDS
GACTCGTGTACCTAAAGTGC+AGG 0.535807 4.2:+20217703 MS.gene90259:CDS
TTGTAGGAATTGTTGTGTTG+CGG 0.536039 4.2:-20217913 None:intergenic
CCTGATGAGGCTGTTGCAAT+GGG 0.536816 4.2:+20217773 MS.gene90259:CDS
TATGGGATGAACAGCAAAGA+GGG 0.537258 4.2:+20217136 MS.gene90259:CDS
TGGGTATCAAGGTGCTCCAA+GGG 0.538510 4.2:+20218587 MS.gene90259:CDS
GATGTCACTCCTCTATCCCT+GGG 0.540459 4.2:+20217851 MS.gene90259:CDS
GGCAAACCTCTTGGGGCAGG+AGG 0.540636 4.2:-20218667 None:intergenic
AAAGTTATTGAGAATTCTGA+AGG 0.542496 4.2:+20216674 MS.gene90259:CDS
CTGGGTATTGAGACTTTGGG+TGG 0.543172 4.2:+20217869 MS.gene90259:CDS
AATTCTCAGCACTTCAAGAC+CGG 0.543184 4.2:-20217083 None:intergenic
GTTGGTTACAGCCTGACGCT+TGG 0.547556 4.2:-20216762 None:intergenic
GGCACCCAATGGAGATGCAT+GGG 0.549734 4.2:+20216886 MS.gene90259:CDS
GATGGAGGTTCTCCAGGTGG+TGG 0.550859 4.2:+20219114 MS.gene90259:CDS
TTGAGAATTCTGAAGGAGCT+CGG 0.556650 4.2:+20216681 MS.gene90259:CDS
GGAGCCTGTTCACCACCACC+TGG 0.557888 4.2:-20219126 None:intergenic
GTTGATGAGGTTCTTCTCGT+CGG 0.558124 4.2:+20217674 MS.gene90259:CDS
ATCATATGCAGCTCAAAAGT+GGG 0.564862 4.2:+20216372 MS.gene90259:CDS
CATATGTCAGGTGGGTCAAG+TGG 0.568288 4.2:+20219081 MS.gene90259:CDS
TCTTTCAAGCAGCTCTTACA+GGG 0.569460 4.2:-20217629 None:intergenic
TCTGCCAAAGACAAATCCAC+TGG 0.570529 4.2:+20218739 MS.gene90259:CDS
GTGGGTATCAAGGTGCTCCA+AGG 0.570815 4.2:+20218586 MS.gene90259:CDS
GATGAGGTTCTTCTCGTCGG+AGG 0.572161 4.2:+20217677 MS.gene90259:CDS
GATATTCAAATGCTTTGCAC+CGG 0.572709 4.2:-20217546 None:intergenic
GGCATTCCTCCTGCCCCAAG+AGG 0.573254 4.2:+20218661 MS.gene90259:CDS
AATCTGAGGCAAACCTCTTG+GGG 0.574961 4.2:-20218674 None:intergenic
ATATGAAAGTGCAGCTGCAG+TGG 0.575044 4.2:-20217116 None:intergenic
AGGCACCCAATGGAGATGCA+TGG 0.577576 4.2:+20216885 MS.gene90259:CDS
AGGATAAGCTTGCGTTGCAG+AGG 0.578244 4.2:+20217435 MS.gene90259:CDS
GGCAAAACAAAGCACCTGAA+AGG 0.578986 4.2:-20216409 None:intergenic
AGGCAGGCAACAAAAGATGC+TGG 0.579182 4.2:+20217052 MS.gene90259:CDS
TCCCAAGAAAGTGTCACCAT+TGG 0.580142 4.2:-20217336 None:intergenic
GATTCCTAGTGAGGTTGCGA+AGG 0.581066 4.2:+20218948 MS.gene90259:CDS
AATCGAGTAGATTGATGTGT+CGG 0.581607 4.2:-20218896 None:intergenic
TGGTGGTGAACAGGCTCCAG+AGG 0.582066 4.2:+20219131 MS.gene90259:CDS
TGGTTGAAGGCAACCACTGA+TGG 0.582430 4.2:-20216710 None:intergenic
AATGGTGACACTTTCTTGGG+AGG 0.584699 4.2:+20217338 MS.gene90259:CDS
CATCAGCAGTGATGAAAGGA+AGG 0.584878 4.2:-20217520 None:intergenic
ACAAAAGCACCAATTTGGCT+GGG 0.595143 4.2:-20216935 None:intergenic
ATCTATCAAGGATGTTGATG+AGG 0.595284 4.2:+20217661 MS.gene90259:CDS
TGTACCTAAAGTGCAGGAGG+TGG 0.596493 4.2:+20217709 MS.gene90259:CDS
GTGGTTGCCTTCAACCAGAA+AGG 0.597350 4.2:+20216716 MS.gene90259:CDS
GATGCATCAGCAGTGATGAA+AGG 0.598218 4.2:-20217524 None:intergenic
CGATCGAAAGGCAGAGACAG+AGG 0.598907 4.2:-20215747 None:intergenic
AGCTCGGACAACACCATCAG+TGG 0.601686 4.2:+20216697 MS.gene90259:CDS
TATGAAAGTGCAGCTGCAGT+GGG 0.601744 4.2:-20217115 None:intergenic
AAGATTGTCAAGGCACCCAA+TGG 0.601896 4.2:+20216875 MS.gene90259:CDS
CACCCAAAGTCTCAATACCC+AGG 0.604506 4.2:-20217868 None:intergenic
ACCTGGAGAACCTCCATCAG+AGG 0.605516 4.2:-20219109 None:intergenic
CCAATAACATCACTACCAGC+AGG 0.608458 4.2:-20216512 None:intergenic
GGGCAGGAGGAATGCCAACA+AGG 0.608917 4.2:-20218654 None:intergenic
TGCGAAGGAAATTGAAGATG+CGG 0.608991 4.2:+20218963 MS.gene90259:CDS
ATTGGTCAGCATATGTCAGG+TGG 0.609221 4.2:+20219072 MS.gene90259:CDS
AGAGACAGTAACAATCCCAT+TGG 0.610713 4.2:-20218719 None:intergenic
ATAGAGATTTACCGATCGAA+AGG 0.613056 4.2:-20215759 None:intergenic
GAGTCCTCCTGATGAGCGGA+TGG 0.614772 4.2:-20218779 None:intergenic
TTTCAGGTGAAAGCTACCAA+TGG 0.616098 4.2:+20217320 MS.gene90259:intron
AGTGGAGGTTCCTCTGATGG+AGG 0.616462 4.2:+20219099 MS.gene90259:CDS
AGCTGACAATCAGACTCAAG+TGG 0.624033 4.2:+20218567 MS.gene90259:CDS
ATGTCAGGTGGGTCAAGTGG+AGG 0.625917 4.2:+20219084 MS.gene90259:CDS
ATGCTGACCAATCTTTGACA+CGG 0.628232 4.2:-20219061 None:intergenic
ACCCAAAGTCTCAATACCCA+GGG 0.628381 4.2:-20217867 None:intergenic
CTGAGAGTCCTCCTGATGAG+CGG 0.628649 4.2:-20218783 None:intergenic
TAGGGAAAAGATTCCTAGTG+AGG 0.630551 4.2:+20218939 MS.gene90259:CDS
ATTACCATCCGCTCATCAGG+AGG 0.634993 4.2:+20218775 MS.gene90259:CDS
CAGAGGAAGAAGCAAGATCG+CGG 0.635260 4.2:-20215730 None:intergenic
TGATAGTATTGATCTTGCAA+AGG 0.635285 4.2:+20217415 MS.gene90259:CDS
TCTGATGGAGGTTCTCCAGG+TGG 0.636312 4.2:+20219111 MS.gene90259:CDS
TCCAGAGGCAGAGTATGAAG+AGG 0.637119 4.2:+20219146 MS.gene90259:CDS
TTGGTCAGCATATGTCAGGT+GGG 0.640684 4.2:+20219073 MS.gene90259:CDS
GCTGACAATCAGACTCAAGT+GGG 0.641874 4.2:+20218568 MS.gene90259:CDS
TAAGATGAAGGAAACTGCTG+AGG 0.643269 4.2:+20216964 MS.gene90259:CDS
TCAAAAGTGACTTCAATCTG+AGG 0.643584 4.2:-20218688 None:intergenic
ATGTTATTGGAATTGATTTG+GGG 0.649149 4.2:+20216525 MS.gene90259:CDS
ATGCTCAGAGAGATCAGGAA+AGG 0.649172 4.2:+20218845 MS.gene90259:CDS
CAAAGGAGTAAATCCTGATG+AGG 0.650174 4.2:+20217760 MS.gene90259:CDS
TGCGGTCTCAGATTTGAGAA+CGG 0.650827 4.2:+20218981 MS.gene90259:CDS
TTTGGAAAGAGTCCTAGCAA+AGG 0.662243 4.2:+20217743 MS.gene90259:CDS
TAACCTGATTGAAAGGACAA+AGG 0.662910 4.2:+20217604 MS.gene90259:CDS
GGTACCCTATAAGATTGTCA+AGG 0.671230 4.2:+20216865 MS.gene90259:CDS
TCGTGTACCTAAAGTGCAGG+AGG 0.674141 4.2:+20217706 MS.gene90259:CDS
ATATGGGATGAACAGCAAAG+AGG 0.685497 4.2:+20217135 MS.gene90259:CDS
CTTCAGGGTGGTATTCTCCG+TGG 0.686079 4.2:+20217803 MS.gene90259:CDS
ATGGGATGAACAGCAAAGAG+GGG 0.688004 4.2:+20217137 MS.gene90259:CDS
AGGAAGAAGCAAGATCGCGG+CGG 0.707753 4.2:-20215727 None:intergenic
GGGTATCAAGGTGCTCCAAG+GGG 0.712553 4.2:+20218588 MS.gene90259:CDS
CTTACTTCAATGATGCTCAG+AGG 0.714640 4.2:+20217032 MS.gene90259:CDS
ATGGGAGCAGCTCTTCAGGG+TGG 0.716807 4.2:+20217791 MS.gene90259:CDS
GCAGCTCTTTAACATCACCA+CGG 0.761484 4.2:-20217820 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTATGAAAAATTAGAC+TGG - chr4.2:20216187-20216206 None:intergenic 15.0%
!! AGATGATGAAATTAATAATA+TGG + chr4.2:20218804-20218823 MS.gene90259:CDS 15.0%
!! ATTTAAAAATAAAATCTGCT+TGG + chr4.2:20218212-20218231 MS.gene90259:intron 15.0%
!! TACATTAAATAAATCTGAAT+AGG - chr4.2:20218497-20218516 None:intergenic 15.0%
!!! TTCTGTTTTATTCAATAAAA+AGG + chr4.2:20218317-20218336 MS.gene90259:intron 15.0%
!!! TTTTTCTTAAAAACAGTTTT+TGG - chr4.2:20218192-20218211 None:intergenic 15.0%
!! AATAATAACTGTTGATATCA+TGG + chr4.2:20216231-20216250 MS.gene90259:intron 20.0%
!! ACATAATTATTCCTAATGAT+AGG - chr4.2:20217278-20217297 None:intergenic 20.0%
!! ATTAGGAATAATTATGTAAG+TGG + chr4.2:20217281-20217300 MS.gene90259:intron 20.0%
!! TCAGATTTATTTAATGTAAC+AGG + chr4.2:20218499-20218518 MS.gene90259:intron 20.0%
!!! AATTTTGAAATCATTGTTTC+AGG + chr4.2:20218531-20218550 MS.gene90259:intron 20.0%
!!! TCCATTTTAGAAATTTCAAA+CGG + chr4.2:20217202-20217221 MS.gene90259:CDS 20.0%
! AAACCAAAATAAAACCAAAC+AGG - chr4.2:20218140-20218159 None:intergenic 25.0%
! AAAGTTATTGAGAATTCTGA+AGG + chr4.2:20216674-20216693 MS.gene90259:CDS 25.0%
! ATCTTTCTTAACCTATCATT+AGG + chr4.2:20217264-20217283 MS.gene90259:intron 25.0%
! CAATAAAAAGGAAATCAAAC+AGG + chr4.2:20218329-20218348 MS.gene90259:intron 25.0%
! CAATTCATGTGTTTCTTTAA+TGG + chr4.2:20216553-20216572 MS.gene90259:CDS 25.0%
! CATTAAAGAAACACATGAAT+TGG - chr4.2:20216555-20216574 None:intergenic 25.0%
! GAAAACAAAAGAGAAATCTA+GGG - chr4.2:20218355-20218374 None:intergenic 25.0%
! TAATGATAGGTTAAGAAAGA+TGG - chr4.2:20217265-20217284 None:intergenic 25.0%
! TCAGAATTCTCAATAACTTT+AGG - chr4.2:20216674-20216693 None:intergenic 25.0%
! TGATGTTATTGGAATTGATT+TGG + chr4.2:20216523-20216542 MS.gene90259:CDS 25.0%
!! ACCGTTTGAAATTTCTAAAA+TGG - chr4.2:20217206-20217225 None:intergenic 25.0%
!! GATGTTATTGGAATTGATTT+GGG + chr4.2:20216524-20216543 MS.gene90259:CDS 25.0%
!! TCACTGATAACATATTTTTC+AGG + chr4.2:20217304-20217323 MS.gene90259:intron 25.0%
!! TCTTCAATGTTTTATGAGTT+AGG + chr4.2:20215827-20215846 MS.gene90259:intron 25.0%
!! TTTTGTTCTTACTAAGATGA+AGG + chr4.2:20216952-20216971 MS.gene90259:CDS 25.0%
!!! AGAATTGTTTTCTATTTCTG+AGG + chr4.2:20217992-20218011 MS.gene90259:intron 25.0%
!!! AGATTTTGATAATGCTTTGT+TGG + chr4.2:20217364-20217383 MS.gene90259:CDS 25.0%
!!! AGTAAGATACTTTTTTTGGA+GGG - chr4.2:20218072-20218091 None:intergenic 25.0%
!!! ATAACTTTAGGATTCTGAAA+AGG - chr4.2:20216662-20216681 None:intergenic 25.0%
!!! ATGTTATTGGAATTGATTTG+GGG + chr4.2:20216525-20216544 MS.gene90259:CDS 25.0%
!!! ATTACTTTTGGACATGTTTT+TGG + chr4.2:20216604-20216623 MS.gene90259:intron 25.0%
!!! CTATTTCTCTTGATTACTTT+TGG + chr4.2:20216592-20216611 MS.gene90259:intron 25.0%
!!! CTTTAGAAATTGTTTTTCCA+AGG - chr4.2:20216994-20217013 None:intergenic 25.0%
!!! GTAACATGTAGATTTTGAAA+AGG + chr4.2:20218413-20218432 MS.gene90259:intron 25.0%
!!! TAACTTTAGGATTCTGAAAA+GGG - chr4.2:20216661-20216680 None:intergenic 25.0%
!!! TGTCAGTAAGATACTTTTTT+TGG - chr4.2:20218076-20218095 None:intergenic 25.0%
!!! TTTTGAAAAGGAAATCAAAC+AGG + chr4.2:20218425-20218444 MS.gene90259:intron 25.0%
AACACAAAAGGAGATGAAAA+TGG + chr4.2:20216844-20216863 MS.gene90259:CDS 30.0%
AACATCCTTGATAGATATGT+TGG - chr4.2:20217657-20217676 None:intergenic 30.0%
AATATACATGACCCAATGAT+CGG - chr4.2:20216093-20216112 None:intergenic 30.0%
AATTTCAAACGGTGTATTTG+AGG + chr4.2:20217213-20217232 MS.gene90259:CDS 30.0%
AGGCATTCAGTTATTTACAA+TGG - chr4.2:20218120-20218139 None:intergenic 30.0%
ATAAAACAGAAACACCTTCT+AGG - chr4.2:20218308-20218327 None:intergenic 30.0%
ATTGGGTCATGTATATTTGT+TGG + chr4.2:20216096-20216115 MS.gene90259:intron 30.0%
CGAAAACAAAAGAGAAATCT+AGG - chr4.2:20218356-20218375 None:intergenic 30.0%
CTGCAAAACAATCAAAAGAA+AGG - chr4.2:20216332-20216351 None:intergenic 30.0%
GAATAGTGAATCGATAAAAC+AGG - chr4.2:20218379-20218398 None:intergenic 30.0%
GTTCACATAGAATCAGAAAA+AGG + chr4.2:20218276-20218295 MS.gene90259:intron 30.0%
TAAATAACTGAATGCCTGTT+TGG + chr4.2:20218123-20218142 MS.gene90259:intron 30.0%
TCATGTGTTTCTTTAATGGA+GGG + chr4.2:20216557-20216576 MS.gene90259:CDS 30.0%
TGATATCATGGTATCATTCA+TGG + chr4.2:20216243-20216262 MS.gene90259:intron 30.0%
TGGTAAATAACCTGATTGAA+AGG + chr4.2:20217597-20217616 MS.gene90259:CDS 30.0%
TTCATGTGTTTCTTTAATGG+AGG + chr4.2:20216556-20216575 MS.gene90259:CDS 30.0%
! AACCCAACAAATACTCTTTT+TGG + chr4.2:20216782-20216801 MS.gene90259:CDS 30.0%
! TTTTTGTGTTACCGATCATT+GGG + chr4.2:20216079-20216098 MS.gene90259:intron 30.0%
!! AAAAAGAGTATTTGTTGGGT+TGG - chr4.2:20216783-20216802 None:intergenic 30.0%
!! TAAGAACAAAAGCACCAATT+TGG - chr4.2:20216943-20216962 None:intergenic 30.0%
!! TCTACTTTTCACATAATCTG+TGG + chr4.2:20216001-20216020 MS.gene90259:intron 30.0%
!! TGATAGTATTGATCTTGCAA+AGG + chr4.2:20217415-20217434 MS.gene90259:CDS 30.0%
!! TGCCAAAAAGAGTATTTGTT+GGG - chr4.2:20216787-20216806 None:intergenic 30.0%
!!! ATGCCTGTTTGGTTTTATTT+TGG + chr4.2:20218134-20218153 MS.gene90259:intron 30.0%
!!! CAGTAAGATACTTTTTTTGG+AGG - chr4.2:20218073-20218092 None:intergenic 30.0%
!!! GTAAGATACTTTTTTTGGAG+GGG - chr4.2:20218071-20218090 None:intergenic 30.0%
!!! TTTTTTGTGTTACCGATCAT+TGG + chr4.2:20216078-20216097 MS.gene90259:intron 30.0%
AAAAGAGTTTGAGCGAGTAT+AGG + chr4.2:20218920-20218939 MS.gene90259:CDS 35.0%
AAAGAGTTTGAGCGAGTATA+GGG + chr4.2:20218921-20218940 MS.gene90259:CDS 35.0%
AATCGAGTAGATTGATGTGT+CGG - chr4.2:20218899-20218918 None:intergenic 35.0%
AATTCCTACAAAGAAGAGTC+AGG + chr4.2:20217925-20217944 MS.gene90259:CDS 35.0%
AGACCCAAATGATAGTATCA+CGG - chr4.2:20216029-20216048 None:intergenic 35.0%
AGATGCCAACATATCTATCA+AGG + chr4.2:20217649-20217668 MS.gene90259:CDS 35.0%
AGTATCTTACTGACATTCCA+AGG + chr4.2:20218081-20218100 MS.gene90259:intron 35.0%
ATAGAGATTTACCGATCGAA+AGG - chr4.2:20215762-20215781 None:intergenic 35.0%
ATCATATGCAGCTCAAAAGT+GGG + chr4.2:20216372-20216391 MS.gene90259:CDS 35.0%
ATCTATCAAGGATGTTGATG+AGG + chr4.2:20217661-20217680 MS.gene90259:CDS 35.0%
ATTACCTGACTCTTCTTTGT+AGG - chr4.2:20217932-20217951 None:intergenic 35.0%
GAAAAAGGATAACACCTAGA+AGG + chr4.2:20218291-20218310 MS.gene90259:intron 35.0%
GATATTCAAATGCTTTGCAC+CGG - chr4.2:20217549-20217568 None:intergenic 35.0%
GTATCTTACTGACATTCCAA+GGG + chr4.2:20218082-20218101 MS.gene90259:intron 35.0%
GTTCCGTGATACTATCATTT+GGG + chr4.2:20216023-20216042 MS.gene90259:intron 35.0%
TAACAACCTGTCATTGAACA+TGG - chr4.2:20216150-20216169 None:intergenic 35.0%
TAACCTGATTGAAAGGACAA+AGG + chr4.2:20217604-20217623 MS.gene90259:CDS 35.0%
TCAAAAGTGACTTCAATCTG+AGG - chr4.2:20218691-20218710 None:intergenic 35.0%
TCGCGAAAATGAGAAACTTA+GGG - chr4.2:20218451-20218470 None:intergenic 35.0%
TGAGCAAAAATAGTGAAGTG+AGG - chr4.2:20215787-20215806 None:intergenic 35.0%
TGTTTCTTTAATGGAGGGAA+AGG + chr4.2:20216562-20216581 MS.gene90259:CDS 35.0%
TTGTAGGAATTGTTGTGTTG+CGG - chr4.2:20217916-20217935 None:intergenic 35.0%
! AATCTGTTGTTCTTTTCCAG+TGG - chr4.2:20218758-20218777 None:intergenic 35.0%
! ACTTTTGACATAGATGCCAA+TGG + chr4.2:20218703-20218722 MS.gene90259:CDS 35.0%
! CTTTTGACATAGATGCCAAT+GGG + chr4.2:20218704-20218723 MS.gene90259:CDS 35.0%
! TGCTTTTGTACTACAGTTCT+AGG + chr4.2:20216489-20216508 MS.gene90259:intron 35.0%
! TTCATCTCCTTTTGTGTTTG+CGG - chr4.2:20216842-20216861 None:intergenic 35.0%
!! GTGCCAAAAAGAGTATTTGT+TGG - chr4.2:20216788-20216807 None:intergenic 35.0%
!! TTGATTGTTTTGCAGTTGAC+AGG + chr4.2:20216337-20216356 MS.gene90259:intron 35.0%
!! TTTTCCAGTGGATTTGTCTT+TGG - chr4.2:20218746-20218765 None:intergenic 35.0%
!!! ATACTTTTTTTGGAGGGGTT+GGG - chr4.2:20218066-20218085 None:intergenic 35.0%
!!! CTCATTGCTGTTTTTGATCT+CGG + chr4.2:20217160-20217179 MS.gene90259:CDS 35.0%
AAAGATGCTGGTAGAATTGC+CGG + chr4.2:20217064-20217083 MS.gene90259:CDS 40.0%
AACAAAGCCGTGTCAAAGAT+TGG + chr4.2:20219054-20219073 MS.gene90259:CDS 40.0%
AATTCTCAGCACTTCAAGAC+CGG - chr4.2:20217086-20217105 None:intergenic 40.0%
ACCAATGGTGACACTTTCTT+GGG + chr4.2:20217335-20217354 MS.gene90259:CDS 40.0%
AGAGACAGTAACAATCCCAT+TGG - chr4.2:20218722-20218741 None:intergenic 40.0%
ATATGGGATGAACAGCAAAG+AGG + chr4.2:20217135-20217154 MS.gene90259:CDS 40.0%
ATCTTTCAAGCAGCTCTTAC+AGG - chr4.2:20217633-20217652 None:intergenic 40.0%
ATGCTGACCAATCTTTGACA+CGG - chr4.2:20219064-20219083 None:intergenic 40.0%
ATGGTTCTCTTCTTTACCCT+TGG - chr4.2:20218101-20218120 None:intergenic 40.0%
CAAAGGAGTAAATCCTGATG+AGG + chr4.2:20217760-20217779 MS.gene90259:CDS 40.0%
CATCATATGCAGCTCAAAAG+TGG + chr4.2:20216371-20216390 MS.gene90259:CDS 40.0%
CTCGCGAAAATGAGAAACTT+AGG - chr4.2:20218452-20218471 None:intergenic 40.0%
CTGTTACCATGTTCAATGAC+AGG + chr4.2:20216141-20216160 MS.gene90259:intron 40.0%
CTTACTTCAATGATGCTCAG+AGG + chr4.2:20217032-20217051 MS.gene90259:CDS 40.0%
CTTGGAGAATTTGACCTTGT+TGG + chr4.2:20218640-20218659 MS.gene90259:CDS 40.0%
CTTTAATGGAGGGAAAGGTA+AGG + chr4.2:20216567-20216586 MS.gene90259:intron 40.0%
GGTACCCTATAAGATTGTCA+AGG + chr4.2:20216865-20216884 MS.gene90259:CDS 40.0%
GGTGCCTTGACAATCTTATA+GGG - chr4.2:20216872-20216891 None:intergenic 40.0%
GGTTCCGTGATACTATCATT+TGG + chr4.2:20216022-20216041 MS.gene90259:intron 40.0%
GTTGACTAGATCGAAGTTTG+AGG + chr4.2:20217571-20217590 MS.gene90259:CDS 40.0%
TAAGATGAAGGAAACTGCTG+AGG + chr4.2:20216964-20216983 MS.gene90259:CDS 40.0%
TACCAATGGTGACACTTTCT+TGG + chr4.2:20217334-20217353 MS.gene90259:CDS 40.0%
TAGGGAAAAGATTCCTAGTG+AGG + chr4.2:20218939-20218958 MS.gene90259:CDS 40.0%
TATGGGATGAACAGCAAAGA+GGG + chr4.2:20217136-20217155 MS.gene90259:CDS 40.0%
TCAGGATTTACTCCTTTGCT+AGG - chr4.2:20217758-20217777 None:intergenic 40.0%
TCTTTCAAGCAGCTCTTACA+GGG - chr4.2:20217632-20217651 None:intergenic 40.0%
TGAGCATCATTGAAGTAAGC+TGG - chr4.2:20217031-20217050 None:intergenic 40.0%
TGATGATCCGCAAACACAAA+AGG + chr4.2:20216832-20216851 MS.gene90259:CDS 40.0%
TGCATAGCGTATCAATCTGT+GGG + chr4.2:20215855-20215874 MS.gene90259:intron 40.0%
TGCCATACAGTACAGAACAA+AGG - chr4.2:20216433-20216452 None:intergenic 40.0%
TGCCTTTGTTCTGTACTGTA+TGG + chr4.2:20216428-20216447 MS.gene90259:intron 40.0%
TGCGAAGGAAATTGAAGATG+CGG + chr4.2:20218963-20218982 MS.gene90259:CDS 40.0%
TGGTATCATTCATGGAACAG+CGG + chr4.2:20216251-20216270 MS.gene90259:intron 40.0%
TGTAGGAATTGTTGTGTTGC+GGG - chr4.2:20217915-20217934 None:intergenic 40.0%
TGTGTGTTAGGGATGATGAA+AGG + chr4.2:20216052-20216071 MS.gene90259:intron 40.0%
TTGCATAGCGTATCAATCTG+TGG + chr4.2:20215854-20215873 MS.gene90259:intron 40.0%
TTTGGAAAGAGTCCTAGCAA+AGG + chr4.2:20217743-20217762 MS.gene90259:CDS 40.0%
TTTGGCACCAAACGTTTGAT+TGG + chr4.2:20216800-20216819 MS.gene90259:CDS 40.0%
! AAGATTGGTCAGCATATGTC+AGG + chr4.2:20219069-20219088 MS.gene90259:CDS 40.0%
! AAGGGTATAAGCATTAGTCC+AGG - chr4.2:20216643-20216662 None:intergenic 40.0%
! CACTTTTGAGCTGCATATGA+TGG - chr4.2:20216373-20216392 None:intergenic 40.0%
! TAGATCGAAGTTTGAGGCTT+TGG + chr4.2:20217577-20217596 MS.gene90259:CDS 40.0%
! TTGAGAATTCTGAAGGAGCT+CGG + chr4.2:20216681-20216700 MS.gene90259:CDS 40.0%
! TTTCAGGTGAAAGCTACCAA+TGG + chr4.2:20217320-20217339 MS.gene90259:intron 40.0%
!! AACAAAAGCACCAATTTGGC+TGG - chr4.2:20216939-20216958 None:intergenic 40.0%
!! ACAAAAGCACCAATTTGGCT+GGG - chr4.2:20216938-20216957 None:intergenic 40.0%
!!! ATTGCTGTTTTTGATCTCGG+AGG + chr4.2:20217163-20217182 MS.gene90259:CDS 40.0%
!!! GATACTTTTTTTGGAGGGGT+TGG - chr4.2:20218067-20218086 None:intergenic 40.0%
!!! TACTTTTTTTGGAGGGGTTG+GGG - chr4.2:20218065-20218084 None:intergenic 40.0%
!!! TTGGACATGTTTTTGGTGCA+TGG + chr4.2:20216611-20216630 MS.gene90259:intron 40.0%
AACAGTATAGCCAGTCGCAA+AGG - chr4.2:20216126-20216145 None:intergenic 45.0%
AATGGTGACACTTTCTTGGG+AGG + chr4.2:20217338-20217357 MS.gene90259:CDS 45.0%
ACCCAAAGTCTCAATACCCA+GGG - chr4.2:20217870-20217889 None:intergenic 45.0%
ACTGCAGCTGCACTTTCATA+TGG + chr4.2:20217118-20217137 MS.gene90259:CDS 45.0%
AGCTCAAAAGTGGGCAAGTT+TGG + chr4.2:20216381-20216400 MS.gene90259:CDS 45.0%
AGCTGACAATCAGACTCAAG+TGG + chr4.2:20218567-20218586 MS.gene90259:CDS 45.0%
ATGCTCAGAGAGATCAGGAA+AGG + chr4.2:20218845-20218864 MS.gene90259:CDS 45.0%
ATGGGATGAACAGCAAAGAG+GGG + chr4.2:20217137-20217156 MS.gene90259:CDS 45.0%
ATTGGTCAGCATATGTCAGG+TGG + chr4.2:20219072-20219091 MS.gene90259:CDS 45.0%
ATTTCCTTCGCAACCTCACT+AGG - chr4.2:20218955-20218974 None:intergenic 45.0%
CAGTATTCTCCCAGCCAAAT+TGG + chr4.2:20216926-20216945 MS.gene90259:CDS 45.0%
CATCAGCAGTGATGAAAGGA+AGG - chr4.2:20217523-20217542 None:intergenic 45.0%
CCAATAACATCACTACCAGC+AGG - chr4.2:20216515-20216534 None:intergenic 45.0%
CTGCAGCTGCACTTTCATAT+GGG + chr4.2:20217119-20217138 MS.gene90259:CDS 45.0%
GAGGTGGTTTCAGAGATCTT+TGG + chr4.2:20217725-20217744 MS.gene90259:CDS 45.0%
GATGCATCAGCAGTGATGAA+AGG - chr4.2:20217527-20217546 None:intergenic 45.0%
GATTTGAGAACGGCTATAGC+AGG + chr4.2:20218991-20219010 MS.gene90259:CDS 45.0%
GCACCAAACGTTTGATTGGT+AGG + chr4.2:20216804-20216823 MS.gene90259:CDS 45.0%
GCAGCTCTTTAACATCACCA+CGG - chr4.2:20217823-20217842 None:intergenic 45.0%
GCTGACAATCAGACTCAAGT+GGG + chr4.2:20218568-20218587 MS.gene90259:CDS 45.0%
GGGTGCCTTGACAATCTTAT+AGG - chr4.2:20216873-20216892 None:intergenic 45.0%
GGTTAAGAAAGATGGCAGCA+TGG - chr4.2:20217257-20217276 None:intergenic 45.0%
GGTTGGGGGAGATTTGATTA+AGG - chr4.2:20218050-20218069 None:intergenic 45.0%
GTGCCTTTGTCCTTTCAATC+AGG - chr4.2:20217610-20217629 None:intergenic 45.0%
TCAACCCATGCATCTCCATT+GGG - chr4.2:20216893-20216912 None:intergenic 45.0%
TCAGACTCAAGTGGGTATCA+AGG + chr4.2:20218576-20218595 MS.gene90259:CDS 45.0%
TCTGCCAAAGACAAATCCAC+TGG + chr4.2:20218739-20218758 MS.gene90259:CDS 45.0%
TGCGGTCTCAGATTTGAGAA+CGG + chr4.2:20218981-20219000 MS.gene90259:CDS 45.0%
TGTTGGATTACCTTTGCGAC+TGG + chr4.2:20216113-20216132 MS.gene90259:intron 45.0%
TTCAACCCATGCATCTCCAT+TGG - chr4.2:20216894-20216913 None:intergenic 45.0%
TTCATCACTGCTGATGCATC+CGG + chr4.2:20217527-20217546 MS.gene90259:CDS 45.0%
TTGGGTCTCTGTGTGTGTTA+GGG + chr4.2:20216041-20216060 MS.gene90259:intron 45.0%
TTGGTCAGCATATGTCAGGT+GGG + chr4.2:20219073-20219092 MS.gene90259:CDS 45.0%
TTTGGGTCTCTGTGTGTGTT+AGG + chr4.2:20216040-20216059 MS.gene90259:intron 45.0%
! AAGATTGTCAAGGCACCCAA+TGG + chr4.2:20216875-20216894 MS.gene90259:CDS 45.0%
! AATCTGAGGCAAACCTCTTG+GGG - chr4.2:20218677-20218696 None:intergenic 45.0%
! AGATCTGTGAATCTGAGACG+TGG + chr4.2:20215936-20215955 MS.gene90259:intron 45.0%
! ATATGAAAGTGCAGCTGCAG+TGG - chr4.2:20217119-20217138 None:intergenic 45.0%
! CAATCTGAGGCAAACCTCTT+GGG - chr4.2:20218678-20218697 None:intergenic 45.0%
! CCTGCTGGTAGTGATGTTAT+TGG + chr4.2:20216512-20216531 MS.gene90259:CDS 45.0%
! GGCAAAACAAAGCACCTGAA+AGG - chr4.2:20216412-20216431 None:intergenic 45.0%
! GTTGATGAGGTTCTTCTCGT+CGG + chr4.2:20217674-20217693 MS.gene90259:CDS 45.0%
! TATGAAAGTGCAGCTGCAGT+GGG - chr4.2:20217118-20217137 None:intergenic 45.0%
! TCAATCTGAGGCAAACCTCT+TGG - chr4.2:20218679-20218698 None:intergenic 45.0%
!! ATCCCTGGGTATTGAGACTT+TGG + chr4.2:20217865-20217884 MS.gene90259:CDS 45.0%
!! TCCCAAGAAAGTGTCACCAT+TGG - chr4.2:20217339-20217358 None:intergenic 45.0%
!! TCCCTGGGTATTGAGACTTT+GGG + chr4.2:20217866-20217885 MS.gene90259:CDS 45.0%
!! TTTGGTGCATGGTTTTTGCC+TGG + chr4.2:20216622-20216641 MS.gene90259:intron 45.0%
!!! ACTTTTTTTGGAGGGGTTGG+GGG - chr4.2:20218064-20218083 None:intergenic 45.0%
ACCTCTTCATACTCTGCCTC+TGG - chr4.2:20219150-20219169 None:intergenic 50.0%
AGATGTCACTCCTCTATCCC+TGG + chr4.2:20217850-20217869 MS.gene90259:CDS 50.0%
AGGATAAGCTTGCGTTGCAG+AGG + chr4.2:20217435-20217454 MS.gene90259:CDS 50.0%
AGGCAGGCAACAAAAGATGC+TGG + chr4.2:20217052-20217071 MS.gene90259:CDS 50.0%
ATGAGGTTCTTCTCGTCGGA+GGG + chr4.2:20217678-20217697 MS.gene90259:CDS 50.0%
ATTACCATCCGCTCATCAGG+AGG + chr4.2:20218775-20218794 MS.gene90259:CDS 50.0%
CAACAAGCAGCTCTCCTTTC+TGG - chr4.2:20216733-20216752 None:intergenic 50.0%
CACCCAAAGTCTCAATACCC+AGG - chr4.2:20217871-20217890 None:intergenic 50.0%
CAGAAAGGAGAGCTGCTTGT+TGG + chr4.2:20216731-20216750 MS.gene90259:CDS 50.0%
CAGAGGAAGAAGCAAGATCG+CGG - chr4.2:20215733-20215752 None:intergenic 50.0%
CAGATTACCATCCGCTCATC+AGG + chr4.2:20218772-20218791 MS.gene90259:CDS 50.0%
CATATGTCAGGTGGGTCAAG+TGG + chr4.2:20219081-20219100 MS.gene90259:CDS 50.0%
CCTGATGAGGCTGTTGCAAT+GGG + chr4.2:20217773-20217792 MS.gene90259:CDS 50.0%
CTCTGTCTCTGCCTTTCGAT+CGG + chr4.2:20215748-20215767 MS.gene90259:CDS 50.0%
CTTCAATGATGCTCAGAGGC+AGG + chr4.2:20217036-20217055 MS.gene90259:CDS 50.0%
GAAACCACCTCCTGCACTTT+AGG - chr4.2:20217716-20217735 None:intergenic 50.0%
GAAACTGCTGAGGCATACCT+TGG + chr4.2:20216974-20216993 MS.gene90259:CDS 50.0%
GACTCGTGTACCTAAAGTGC+AGG + chr4.2:20217703-20217722 MS.gene90259:CDS 50.0%
GATGTCACTCCTCTATCCCT+GGG + chr4.2:20217851-20217870 MS.gene90259:CDS 50.0%
GATTCCTAGTGAGGTTGCGA+AGG + chr4.2:20218948-20218967 MS.gene90259:CDS 50.0%
GCGCCTACCAATCAAACGTT+TGG - chr4.2:20216810-20216829 None:intergenic 50.0%
GCTGCAGACAACAAGAGTCT+TGG + chr4.2:20218622-20218641 MS.gene90259:CDS 50.0%
GGGATAGAGGAGTGACATCT+AGG - chr4.2:20217850-20217869 None:intergenic 50.0%
GTCTCAATACCCAGGGATAG+AGG - chr4.2:20217863-20217882 None:intergenic 50.0%
GTGGTTGCCTTCAACCAGAA+AGG + chr4.2:20216716-20216735 MS.gene90259:CDS 50.0%
GTTGCATGCTCAGAGAGATC+AGG + chr4.2:20218840-20218859 MS.gene90259:CDS 50.0%
TCAAGTGGAGGTTCCTCTGA+TGG + chr4.2:20219096-20219115 MS.gene90259:CDS 50.0%
TCCAGAGGCAGAGTATGAAG+AGG + chr4.2:20219146-20219165 MS.gene90259:CDS 50.0%
TCCTGATGAGGCTGTTGCAA+TGG + chr4.2:20217772-20217791 MS.gene90259:CDS 50.0%
TCGTGTACCTAAAGTGCAGG+AGG + chr4.2:20217706-20217725 MS.gene90259:CDS 50.0%
TGGTTGAAGGCAACCACTGA+TGG - chr4.2:20216713-20216732 None:intergenic 50.0%
TGTACCTAAAGTGCAGGAGG+TGG + chr4.2:20217709-20217728 MS.gene90259:CDS 50.0%
! CAAGTTTGGCTCGACCTTTC+AGG + chr4.2:20216395-20216414 MS.gene90259:CDS 50.0%
! TGGGTATCAAGGTGCTCCAA+GGG + chr4.2:20218587-20218606 MS.gene90259:CDS 50.0%
!! CAGCTCTCCTTTCTGGTTGA+AGG - chr4.2:20216726-20216745 None:intergenic 50.0%
!! CTGGGTATTGAGACTTTGGG+TGG + chr4.2:20217869-20217888 MS.gene90259:CDS 50.0%
!! TACTACAGTTCTAGGCCTGC+TGG + chr4.2:20216497-20216516 MS.gene90259:intron 50.0%
!!! GCTGTTTTTGATCTCGGAGG+TGG + chr4.2:20217166-20217185 MS.gene90259:CDS 50.0%
ACCTGGAGAACCTCCATCAG+AGG - chr4.2:20219112-20219131 None:intergenic 55.0%
AGCTCGGACAACACCATCAG+TGG + chr4.2:20216697-20216716 MS.gene90259:CDS 55.0%
AGGAAGAAGCAAGATCGCGG+CGG - chr4.2:20215730-20215749 None:intergenic 55.0%
AGGCACCCAATGGAGATGCA+TGG + chr4.2:20216885-20216904 MS.gene90259:CDS 55.0%
AGTGGAGGTTCCTCTGATGG+AGG + chr4.2:20219099-20219118 MS.gene90259:CDS 55.0%
ATGTCAGGTGGGTCAAGTGG+AGG + chr4.2:20219084-20219103 MS.gene90259:CDS 55.0%
CCCATTGCAACAGCCTCATC+AGG - chr4.2:20217776-20217795 None:intergenic 55.0%
CGATCGAAAGGCAGAGACAG+AGG - chr4.2:20215750-20215769 None:intergenic 55.0%
CTGAGAGTCCTCCTGATGAG+CGG - chr4.2:20218786-20218805 None:intergenic 55.0%
CTTCAGGGTGGTATTCTCCG+TGG + chr4.2:20217803-20217822 MS.gene90259:CDS 55.0%
GATGAGGTTCTTCTCGTCGG+AGG + chr4.2:20217677-20217696 MS.gene90259:CDS 55.0%
GCAATGGGAGCAGCTCTTCA+GGG + chr4.2:20217788-20217807 MS.gene90259:CDS 55.0%
GGCACCCAATGGAGATGCAT+GGG + chr4.2:20216886-20216905 MS.gene90259:CDS 55.0%
GTTGGTTACAGCCTGACGCT+TGG - chr4.2:20216765-20216784 None:intergenic 55.0%
TCCTCTGATGGAGGTTCTCC+AGG + chr4.2:20219108-20219127 MS.gene90259:CDS 55.0%
TCTGATGGAGGTTCTCCAGG+TGG + chr4.2:20219111-20219130 MS.gene90259:CDS 55.0%
TGCAATGGGAGCAGCTCTTC+AGG + chr4.2:20217787-20217806 MS.gene90259:CDS 55.0%
! GGGTATCAAGGTGCTCCAAG+GGG + chr4.2:20218588-20218607 MS.gene90259:CDS 55.0%
! GTGGGTATCAAGGTGCTCCA+AGG + chr4.2:20218586-20218605 MS.gene90259:CDS 55.0%
! TTCTCCAGGTGGTGGTGAAC+AGG + chr4.2:20219122-20219141 MS.gene90259:CDS 55.0%
ATGGGAGCAGCTCTTCAGGG+TGG + chr4.2:20217791-20217810 MS.gene90259:CDS 60.0%
CAGCCATTTCACGCTCCCCT+TGG - chr4.2:20218606-20218625 None:intergenic 60.0%
GAGTCCTCCTGATGAGCGGA+TGG - chr4.2:20218782-20218801 None:intergenic 60.0%
GATGGAGGTTCTCCAGGTGG+TGG + chr4.2:20219114-20219133 MS.gene90259:CDS 60.0%
GGGCAGGAGGAATGCCAACA+AGG - chr4.2:20218657-20218676 None:intergenic 60.0%
GTTACAGCCTGACGCTTGGC+AGG - chr4.2:20216761-20216780 None:intergenic 60.0%
TGAGGCAAACCTCTTGGGGC+AGG - chr4.2:20218673-20218692 None:intergenic 60.0%
TGGTACACCTGCCAAGCGTC+AGG + chr4.2:20216751-20216770 MS.gene90259:CDS 60.0%
! GCTCCAAGGGGAGCGTGAAA+TGG + chr4.2:20218600-20218619 MS.gene90259:CDS 60.0%
! TGGTGGTGAACAGGCTCCAG+AGG + chr4.2:20219131-20219150 MS.gene90259:CDS 60.0%
CAAGATCGCGGCGGAGAGCA+CGG - chr4.2:20215721-20215740 None:intergenic 65.0%
GGAGCCTGTTCACCACCACC+TGG - chr4.2:20219129-20219148 None:intergenic 65.0%
GGCAAACCTCTTGGGGCAGG+AGG - chr4.2:20218670-20218689 None:intergenic 65.0%
GGCATTCCTCCTGCCCCAAG+AGG + chr4.2:20218661-20218680 MS.gene90259:CDS 65.0%
! GAGAGCACGGCGCAAGACGG+CGG - chr4.2:20215708-20215727 None:intergenic 70.0%
! GCGGAGAGCACGGCGCAAGA+CGG - chr4.2:20215711-20215730 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 20215701 20219179 20215701 ID=MS.gene90259
chr4.2 mRNA 20215701 20219179 20215701 ID=MS.gene90259.t1;Parent=MS.gene90259
chr4.2 exon 20215701 20215769 20215701 ID=MS.gene90259.t1.exon1;Parent=MS.gene90259.t1
chr4.2 CDS 20215701 20215769 20215701 ID=cds.MS.gene90259.t1;Parent=MS.gene90259.t1
chr4.2 exon 20216352 20216416 20216352 ID=MS.gene90259.t1.exon2;Parent=MS.gene90259.t1
chr4.2 CDS 20216352 20216416 20216352 ID=cds.MS.gene90259.t1;Parent=MS.gene90259.t1
chr4.2 exon 20216505 20216583 20216505 ID=MS.gene90259.t1.exon3;Parent=MS.gene90259.t1
chr4.2 CDS 20216505 20216583 20216505 ID=cds.MS.gene90259.t1;Parent=MS.gene90259.t1
chr4.2 exon 20216668 20217234 20216668 ID=MS.gene90259.t1.exon4;Parent=MS.gene90259.t1
chr4.2 CDS 20216668 20217234 20216668 ID=cds.MS.gene90259.t1;Parent=MS.gene90259.t1
chr4.2 exon 20217326 20217946 20217326 ID=MS.gene90259.t1.exon5;Parent=MS.gene90259.t1
chr4.2 CDS 20217326 20217946 20217326 ID=cds.MS.gene90259.t1;Parent=MS.gene90259.t1
chr4.2 exon 20218553 20219179 20218553 ID=MS.gene90259.t1.exon6;Parent=MS.gene90259.t1
chr4.2 CDS 20218553 20219179 20218553 ID=cds.MS.gene90259.t1;Parent=MS.gene90259.t1
Gene Sequence

>MS.gene90259

ATGGCCGCCGTCTTGCGCCGTGCTCTCCGCCGCGATCTTGCTTCTTCCTCTGTCTCTGCCTTTCGATCGGTAAATCTCTATTGCCTCACTTCACTATTTTTGCTCATTTATTGTGTTATAGATTTATCTTCAATGTTTTATGAGTTAGGTTATTTGCATAGCGTATCAATCTGTGGGTTTTGCTTAAATTGTTGAAAAAAGTTTATTTTTTCTACTTTTCACATAATCGATTTTAAGATCTGTGAATCTGAGACGTGGTTCTGTGAATCTGAGACGTGAATCTGAAAAAAGTTTATTTTTTCTACTTTTCACATAATCTGTGGTTCCGTGATACTATCATTTGGGTCTCTGTGTGTGTTAGGGATGATGAAAGGTAATTTTTTGTGTTACCGATCATTGGGTCATGTATATTTGTTGGATTACCTTTGCGACTGGCTATACTGTTACCATGTTCAATGACAGGTTGTTACTGCTTTGTTGCATCCAGTCTAATTTTTCATAATTTTATAATTGATTCTTGTATTGTGACTAATAATAACTGTTGATATCATGGTATCATTCATGGAACAGCGGTTGTTAGATTTGTTTTAGTCTTGTATGTAATGAGCATTGTTCAGAAGATAATTTTCCTTTCTTTTGATTGTTTTGCAGTTGACAGGCAGCACTAAGCCATCATATGCAGCTCAAAAGTGGGCAAGTTTGGCTCGACCTTTCAGGTGCTTTGTTTTGCCTTTGTTCTGTACTGTATGGCAGTTTCAATTTTTCATCAAATTTGCTTATTGTAAAATTGCTTTTGTACTACAGTTCTAGGCCTGCTGGTAGTGATGTTATTGGAATTGATTTGGGGACTACCAATTCATGTGTTTCTTTAATGGAGGGAAAGGTAAGGCTCTATTTCTCTTGATTACTTTTGGACATGTTTTTGGTGCATGGTTTTTGCCTGGACTAATGCTTATACCCTTTTCAGAATCCTAAAGTTATTGAGAATTCTGAAGGAGCTCGGACAACACCATCAGTGGTTGCCTTCAACCAGAAAGGAGAGCTGCTTGTTGGTACACCTGCCAAGCGTCAGGCTGTAACCAACCCAACAAATACTCTTTTTGGCACCAAACGTTTGATTGGTAGGCGCTTTGATGATCCGCAAACACAAAAGGAGATGAAAATGGTACCCTATAAGATTGTCAAGGCACCCAATGGAGATGCATGGGTTGAAATCAATAAGCAGCAGTATTCTCCCAGCCAAATTGGTGCTTTTGTTCTTACTAAGATGAAGGAAACTGCTGAGGCATACCTTGGAAAAACAATTTCTAAAGCTGTAGTTACTGTTCCAGCTTACTTCAATGATGCTCAGAGGCAGGCAACAAAAGATGCTGGTAGAATTGCCGGTCTTGAAGTGCTGAGAATTATCAATGAGCCCACTGCAGCTGCACTTTCATATGGGATGAACAGCAAAGAGGGGCTCATTGCTGTTTTTGATCTCGGAGGTGGAACATTTGATGTGTCCATTTTAGAAATTTCAAACGGTGTATTTGAGGTATGAACACTTATTTCTTCCATGCTGCCATCTTTCTTAACCTATCATTAGGAATAATTATGTAAGTGGTCACTGATAACATATTTTTCAGGTGAAAGCTACCAATGGTGACACTTTCTTGGGAGGAGAAGATTTTGATAATGCTTTGTTGGACTTTCTAGTAAGTGAATTCAAGAGAACTGATAGTATTGATCTTGCAAAGGATAAGCTTGCGTTGCAGAGGCTTCGAGAAGCTGCTGAGAAAGCAAAAATAGAACTCTCTTCAACTTCACAAACTGAAATAAACCTTCCTTTCATCACTGCTGATGCATCCGGTGCAAAGCATTTGAATATCACGTTGACTAGATCGAAGTTTGAGGCTTTGGTAAATAACCTGATTGAAAGGACAAAGGCACCCTGTAAGAGCTGCTTGAAAGATGCCAACATATCTATCAAGGATGTTGATGAGGTTCTTCTCGTCGGAGGGATGACTCGTGTACCTAAAGTGCAGGAGGTGGTTTCAGAGATCTTTGGAAAGAGTCCTAGCAAAGGAGTAAATCCTGATGAGGCTGTTGCAATGGGAGCAGCTCTTCAGGGTGGTATTCTCCGTGGTGATGTTAAAGAGCTGCTACTCCTAGATGTCACTCCTCTATCCCTGGGTATTGAGACTTTGGGTGGTATCTTTACAAGATTGATCTCCCGCAACACAACAATTCCTACAAAGAAGAGTCAGGTAATTTTAATTACTCAAGACAACTTTTTTATAAACATTTACTTAAGAATTGTTTTCTATTTCTGAGGAAGTAATGTAGCATTGAATCACACAATTATTTCCTTAATCAAATCTCCCCCAACCCCTCCAAAAAAAGTATCTTACTGACATTCCAAGGGTAAAGAAGAGAACCATTGTAAATAACTGAATGCCTGTTTGGTTTTATTTTGGTTTATAGTTTTTAAATGCTCTTTTGCAAAATTCCAAAAACTGTTTTTAAGAAAAAATTTAAAAATAAAATCTGCTTGGTAATTTGAAACAGCAATACGATTACGATTTTAATGTAGTTTGTTCACATAGAATCAGAAAAAGGATAACACCTAGAAGGTGTTTCTGTTTTATTCAATAAAAAGGAAATCAAACAGGCCCTAGATTTCTCTTTTGTTTTCGCCTGTTTTATCGATTCACTATTCAGATTTTTTTTAATGTAACATGTAGATTTTGAAAAGGAAATCAAACAGGCCCTAAGTTTCTCATTTTCGCGAGTTTTATCATTTCAGATGTTTATCCTATTCAGATTTATTTAATGTAACAGGTATATTCTTAATTTTGAAATCATTGTTTCAGGTGTTTTCGACAGCAGCTGACAATCAGACTCAAGTGGGTATCAAGGTGCTCCAAGGGGAGCGTGAAATGGCTGCAGACAACAAGAGTCTTGGAGAATTTGACCTTGTTGGCATTCCTCCTGCCCCAAGAGGTTTGCCTCAGATTGAAGTCACTTTTGACATAGATGCCAATGGGATTGTTACTGTCTCTGCCAAAGACAAATCCACTGGAAAAGAACAACAGATTACCATCCGCTCATCAGGAGGACTCTCAGATGATGAAATTAATAATATGGTCAAAGAAGCTGAGTTGCATGCTCAGAGAGATCAGGAAAGGAAAGCACTTATTGATATCAAGAATAGTGCCGACACATCAATCTACTCGATTGAAAAGAGTTTGAGCGAGTATAGGGAAAAGATTCCTAGTGAGGTTGCGAAGGAAATTGAAGATGCGGTCTCAGATTTGAGAACGGCTATAGCAGGAGAAAGTGTTGATGAAATTAAGACAAAACTTGATGCTGCAAACAAAGCCGTGTCAAAGATTGGTCAGCATATGTCAGGTGGGTCAAGTGGAGGTTCCTCTGATGGAGGTTCTCCAGGTGGTGGTGAACAGGCTCCAGAGGCAGAGTATGAAGAGGTCAAGAAGTGA
Protein sequence

>MS.gene90259.t1

MAAVLRRALRRDLASSSVSAFRSLTGSTKPSYAAQKWASLARPFSSRPAGSDVIGIDLGTTNSCVSLMEGKNPKVIENSEGARTTPSVVAFNQKGELLVGTPAKRQAVTNPTNTLFGTKRLIGRRFDDPQTQKEMKMVPYKIVKAPNGDAWVEINKQQYSPSQIGAFVLTKMKETAEAYLGKTISKAVVTVPAYFNDAQRQATKDAGRIAGLEVLRIINEPTAAALSYGMNSKEGLIAVFDLGGGTFDVSILEISNGVFEVKATNGDTFLGGEDFDNALLDFLVSEFKRTDSIDLAKDKLALQRLREAAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSKFEALVNNLIERTKAPCKSCLKDANISIKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVAMGAALQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLISRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMAADNKSLGEFDLVGIPPAPRGLPQIEVTFDIDANGIVTVSAKDKSTGKEQQITIRSSGGLSDDEINNMVKEAELHAQRDQERKALIDIKNSADTSIYSIEKSLSEYREKIPSEVAKEIEDAVSDLRTAIAGESVDEIKTKLDAANKAVSKIGQHMSGGSSGGSSDGGSPGGGEQAPEAEYEEVKK