Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91116.t1 | XP_003589752.1 | 97.2 | 609 | 16 | 1 | 1 | 609 | 1 | 608 | 0.00E+00 | 1086.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91116.t1 | Q9SIS3 | 67.4 | 617 | 182 | 7 | 1 | 608 | 1 | 607 | 1.7e-204 | 713.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91116.t1 | G7IBG9 | 97.2 | 609 | 16 | 1 | 1 | 609 | 1 | 608 | 0.0e+00 | 1086.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene91116 | 0.830114 | 3.52E-55 | -1.69E-46 |
| MS.gene049178 | MS.gene91116 | 0.818377 | 2.02E-52 | -1.69E-46 |
| MS.gene049887 | MS.gene91116 | 0.806929 | 6.48E-50 | -1.69E-46 |
| MS.gene050439 | MS.gene91116 | 0.808643 | 2.80E-50 | -1.69E-46 |
| MS.gene051676 | MS.gene91116 | 0.802548 | 5.32E-49 | -1.69E-46 |
| MS.gene052932 | MS.gene91116 | 0.813308 | 2.73E-51 | -1.69E-46 |
| MS.gene055311 | MS.gene91116 | 0.814948 | 1.19E-51 | -1.69E-46 |
| MS.gene055313 | MS.gene91116 | 0.824889 | 6.32E-54 | -1.69E-46 |
| MS.gene055469 | MS.gene91116 | 0.805052 | 1.61E-49 | -1.69E-46 |
| MS.gene055513 | MS.gene91116 | 0.822942 | 1.81E-53 | -1.69E-46 |
| MS.gene055864 | MS.gene91116 | 0.800487 | 1.41E-48 | -1.69E-46 |
| MS.gene056181 | MS.gene91116 | 0.811664 | 6.25E-51 | -1.69E-46 |
| MS.gene058638 | MS.gene91116 | 0.800565 | 1.36E-48 | -1.69E-46 |
| MS.gene058639 | MS.gene91116 | 0.805739 | 1.15E-49 | -1.69E-46 |
| MS.gene058758 | MS.gene91116 | 0.811652 | 6.29E-51 | -1.69E-46 |
| MS.gene059171 | MS.gene91116 | 0.839378 | 1.64E-57 | -1.69E-46 |
| MS.gene059713 | MS.gene91116 | 0.812795 | 3.54E-51 | -1.69E-46 |
| MS.gene060869 | MS.gene91116 | 0.835524 | 1.60E-56 | -1.69E-46 |
| MS.gene060870 | MS.gene91116 | 0.819509 | 1.12E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene91116 | MS.gene29233 | PPI |
| MS.gene91116 | MS.gene88594 | PPI |
| MS.gene91116 | MS.gene026183 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91116.t1 | MTR_1g038840 | 97.209 | 609 | 16 | 1 | 1 | 609 | 1 | 608 | 0.0 | 1220 |
| MS.gene91116.t1 | MTR_1g038840 | 97.012 | 569 | 16 | 1 | 41 | 609 | 1 | 568 | 0.0 | 1139 |
| MS.gene91116.t1 | MTR_5g093860 | 48.387 | 589 | 277 | 6 | 16 | 603 | 15 | 577 | 0.0 | 530 |
| MS.gene91116.t1 | MTR_6g061690 | 51.252 | 519 | 236 | 7 | 15 | 530 | 15 | 519 | 9.83e-165 | 487 |
| MS.gene91116.t1 | MTR_1g076700 | 46.140 | 544 | 267 | 6 | 15 | 551 | 14 | 538 | 2.73e-150 | 451 |
| MS.gene91116.t1 | MTR_8g041400 | 40.878 | 592 | 301 | 6 | 15 | 596 | 13 | 565 | 7.89e-149 | 442 |
| MS.gene91116.t1 | MTR_3g085440 | 40.575 | 557 | 306 | 9 | 1 | 552 | 1 | 537 | 1.38e-134 | 406 |
| MS.gene91116.t1 | MTR_7g075220 | 42.801 | 507 | 276 | 3 | 12 | 518 | 321 | 813 | 1.37e-119 | 379 |
| MS.gene91116.t1 | MTR_3g085440 | 41.364 | 440 | 247 | 5 | 1 | 437 | 1 | 432 | 3.62e-108 | 332 |
| MS.gene91116.t1 | MTR_8g023220 | 35.795 | 528 | 293 | 9 | 2 | 516 | 1 | 495 | 2.58e-96 | 304 |
| MS.gene91116.t1 | MTR_8g032090 | 36.842 | 95 | 56 | 1 | 254 | 348 | 202 | 292 | 1.26e-11 | 66.2 |
| MS.gene91116.t1 | MTR_4g077600 | 53.846 | 52 | 24 | 0 | 27 | 78 | 187 | 238 | 6.75e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91116.t1 | AT2G01910 | 67.099 | 617 | 184 | 8 | 1 | 608 | 1 | 607 | 0.0 | 796 |
| MS.gene91116.t1 | AT1G14690 | 65.309 | 614 | 191 | 9 | 1 | 606 | 1 | 600 | 0.0 | 793 |
| MS.gene91116.t1 | AT1G14690 | 65.309 | 614 | 191 | 9 | 1 | 606 | 1 | 600 | 0.0 | 793 |
| MS.gene91116.t1 | AT2G01910 | 68.056 | 576 | 166 | 7 | 41 | 608 | 1 | 566 | 0.0 | 754 |
| MS.gene91116.t1 | AT5G55230 | 46.734 | 597 | 288 | 9 | 16 | 606 | 15 | 587 | 3.93e-172 | 502 |
| MS.gene91116.t1 | AT5G55230 | 46.734 | 597 | 288 | 9 | 16 | 606 | 15 | 587 | 3.93e-172 | 502 |
| MS.gene91116.t1 | AT4G26760 | 46.115 | 592 | 282 | 9 | 16 | 603 | 15 | 573 | 6.59e-171 | 498 |
| MS.gene91116.t1 | AT5G55230 | 44.728 | 626 | 287 | 10 | 16 | 606 | 15 | 616 | 3.56e-166 | 488 |
| MS.gene91116.t1 | AT2G38720 | 43.031 | 574 | 292 | 6 | 20 | 593 | 12 | 550 | 1.60e-141 | 422 |
| MS.gene91116.t1 | AT5G51600 | 43.979 | 573 | 291 | 9 | 11 | 578 | 10 | 557 | 1.10e-136 | 415 |
| MS.gene91116.t1 | AT3G60840 | 42.095 | 506 | 279 | 4 | 13 | 517 | 12 | 504 | 7.09e-132 | 402 |
| MS.gene91116.t1 | AT1G27920 | 38.571 | 560 | 311 | 8 | 1 | 534 | 1 | 553 | 7.13e-128 | 387 |
| MS.gene91116.t1 | AT5G62250 | 40.070 | 569 | 304 | 8 | 12 | 567 | 5 | 549 | 5.02e-111 | 343 |
| MS.gene91116.t1 | AT5G62250 | 40.070 | 569 | 304 | 8 | 12 | 567 | 5 | 549 | 5.02e-111 | 343 |
| MS.gene91116.t1 | AT1G27920 | 39.036 | 415 | 243 | 5 | 1 | 412 | 1 | 408 | 2.94e-94 | 296 |
Find 118 sgRNAs with CRISPR-Local
Find 240 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACAGCAATACCTGGAATTT+TGG | 0.152671 | 1.3:+21986330 | None:intergenic |
| CATTCTCTCTGTGGTGTTCT+TGG | 0.163659 | 1.3:-21987409 | MS.gene91116:CDS |
| TAAGAAGAGGTTGGAGTTAG+AGG | 0.227815 | 1.3:-21986840 | MS.gene91116:CDS |
| GTAGATCTTGCATCTTCTTT+TGG | 0.235244 | 1.3:+21985588 | None:intergenic |
| AATCAAAAGGAAGCCATATA+TGG | 0.244001 | 1.3:-21985560 | MS.gene91116:CDS |
| GGGAATGCTTAGATGTTTAT+AGG | 0.276626 | 1.3:-21988209 | MS.gene91116:CDS |
| GGTACGTTTGGTGGAATTAT+TGG | 0.281304 | 1.3:-21986070 | MS.gene91116:CDS |
| CTCTTCTTCTCTCTGTTGTC+TGG | 0.295010 | 1.3:+21986032 | None:intergenic |
| AAGTGCAAGTAGTGCTTATA+TGG | 0.309402 | 1.3:+21989181 | None:intergenic |
| TCAGGGGCAGTACTTGTATC+AGG | 0.319336 | 1.3:+21986791 | None:intergenic |
| TTGCTTGTGAAGAGGAAAAT+TGG | 0.319572 | 1.3:-21986532 | MS.gene91116:CDS |
| ATTCGAACTTTGGAATTTGA+TGG | 0.329583 | 1.3:-21987114 | MS.gene91116:CDS |
| ACTAGGTTTAGACCCATATA+TGG | 0.358084 | 1.3:+21985547 | None:intergenic |
| CAGCAAATATGGAACGATAT+TGG | 0.368433 | 1.3:-21988276 | MS.gene91116:CDS |
| TCTCTGTGGTGTTCTTGGAT+TGG | 0.377879 | 1.3:-21987404 | MS.gene91116:CDS |
| TCACATCATCATTGACAGTA+TGG | 0.380804 | 1.3:+21987690 | None:intergenic |
| TCGCTAACCTATTCGAACTT+TGG | 0.382162 | 1.3:-21987124 | MS.gene91116:CDS |
| ATTAATGCACTAGCTTTCTC+AGG | 0.388767 | 1.3:+21986773 | None:intergenic |
| TCAAATTCCAAAGTTCGAAT+AGG | 0.392179 | 1.3:+21987117 | None:intergenic |
| TGTTGCAATCTCAGCTTCCT+TGG | 0.397291 | 1.3:+21988131 | None:intergenic |
| ACCTGAGTCCCATGCAAACT+TGG | 0.397911 | 1.3:+21987352 | None:intergenic |
| TGTTGAAAGAGCGCCTCTTT+CGG | 0.406114 | 1.3:+21987019 | None:intergenic |
| TATGACATTGTATCTTCCTT+AGG | 0.409479 | 1.3:+21985296 | None:intergenic |
| TAATCTGAAACGTGCAGAAC+GGG | 0.409668 | 1.3:-21986368 | MS.gene91116:CDS |
| TTAAACTTGGGGAGGGGACT+CGG | 0.411081 | 1.3:+21985256 | None:intergenic |
| CTTAGATGTTTATAGGAGAA+AGG | 0.411141 | 1.3:-21988202 | MS.gene91116:CDS |
| GATGTACATCATCTACTGTT+TGG | 0.412398 | 1.3:+21987374 | None:intergenic |
| TACTGCACCTCTCAACTTTG+TGG | 0.419511 | 1.3:-21985324 | MS.gene91116:CDS |
| TTGGGGAGGGGACTCGGGTT+CGG | 0.422995 | 1.3:+21985262 | None:intergenic |
| GGTGTTCTTGGATTGGATTT+CGG | 0.424164 | 1.3:-21987397 | MS.gene91116:CDS |
| CTCAGCTTCCTTGGCTGCAA+GGG | 0.426652 | 1.3:+21988140 | None:intergenic |
| TTCTTCAATTCTTCGACCAA+TGG | 0.430753 | 1.3:+21987791 | None:intergenic |
| GTAACTATAACCAAAATTCC+AGG | 0.440102 | 1.3:-21986340 | MS.gene91116:intron |
| CACACACCGCGCTCCTACTC+TGG | 0.450439 | 1.3:-21985386 | MS.gene91116:CDS |
| TAAACTTGGGGAGGGGACTC+GGG | 0.452043 | 1.3:+21985257 | None:intergenic |
| GATAACACTCGGTACAGTGC+TGG | 0.455300 | 1.3:-21986406 | MS.gene91116:CDS |
| CTTATATGGATACTAGTGAT+AGG | 0.457710 | 1.3:+21989195 | None:intergenic |
| GGACAAAGACCGTATGTTGA+TGG | 0.458837 | 1.3:-21988241 | MS.gene91116:CDS |
| GGAATTTATATAGATTAAGA+TGG | 0.464460 | 1.3:-21987858 | MS.gene91116:intron |
| GCTAGTGCATTAATAGATTC+CGG | 0.471570 | 1.3:-21986764 | MS.gene91116:intron |
| TCGTGGTCTTCAAAAGGAAA+AGG | 0.471921 | 1.3:-21987594 | MS.gene91116:intron |
| ATCAAAAGGAAGCCATATAT+GGG | 0.473492 | 1.3:-21985559 | MS.gene91116:CDS |
| ATGTCATATGTAGGTACGTT+TGG | 0.473501 | 1.3:-21986082 | MS.gene91116:intron |
| GTAGAAGAGAAGTAACAGAT+AGG | 0.475843 | 1.3:-21986571 | MS.gene91116:CDS |
| TCCTACTCTGGTCGTCATAA+CGG | 0.476718 | 1.3:-21985374 | MS.gene91116:CDS |
| TTCTTTGCTCAAAGAACTTG+AGG | 0.479736 | 1.3:-21989160 | MS.gene91116:intron |
| AAGATAAGCGGTGAGATTTG+TGG | 0.481668 | 1.3:-21987716 | MS.gene91116:CDS |
| AACAACGGTTATCGTGCAAA+TGG | 0.483810 | 1.3:-21985494 | MS.gene91116:CDS |
| AGATCTACTCCTAAATCAAA+AGG | 0.486123 | 1.3:-21985573 | MS.gene91116:CDS |
| TCATCAATCCCTTGCAGCCA+AGG | 0.486920 | 1.3:-21988148 | MS.gene91116:CDS |
| GAATCAGAAATCACCGAAAG+AGG | 0.488175 | 1.3:-21987032 | MS.gene91116:CDS |
| AGACCGTATGTTGATGGAGC+TGG | 0.494507 | 1.3:-21988235 | MS.gene91116:CDS |
| AATGGCAACAGCGTCGGCTA+TGG | 0.499985 | 1.3:-21985476 | MS.gene91116:CDS |
| TCCAAGTTTGCATGGGACTC+AGG | 0.500735 | 1.3:-21987353 | MS.gene91116:CDS |
| GCATCTTCGTGGTCTTCAAA+AGG | 0.503443 | 1.3:-21987600 | MS.gene91116:CDS |
| CAACTTTGTGGCTATACCTA+AGG | 0.504876 | 1.3:-21985312 | MS.gene91116:CDS |
| GAATATCAAACGCATCTTCG+TGG | 0.509015 | 1.3:-21987611 | MS.gene91116:CDS |
| CTGTGAATAATGTTGGCCAT+TGG | 0.523179 | 1.3:-21989222 | None:intergenic |
| AACAGCGTCGGCTATGGCAA+TGG | 0.523571 | 1.3:-21985470 | MS.gene91116:CDS |
| ATTGAGTTCCGTCGAGGTGT+AGG | 0.524668 | 1.3:+21985431 | None:intergenic |
| TTTGCAGGCTTCGGCAGAAG+TGG | 0.524852 | 1.3:-21986909 | MS.gene91116:intron |
| TCTCAGCTTCCTTGGCTGCA+AGG | 0.526154 | 1.3:+21988139 | None:intergenic |
| ACTCGTATTTAAGAAGAGGT+TGG | 0.527106 | 1.3:-21986849 | MS.gene91116:CDS |
| TTCAACAGAGATAATAGAGA+AGG | 0.529481 | 1.3:-21987003 | MS.gene91116:intron |
| GTATGTTGATGGAGCTGGAA+AGG | 0.530574 | 1.3:-21988230 | MS.gene91116:CDS |
| AAGAACTCGTATTTAAGAAG+AGG | 0.530652 | 1.3:-21986853 | MS.gene91116:CDS |
| AAGGAAATCTAGAGTACAGA+AGG | 0.531486 | 1.3:-21987257 | MS.gene91116:intron |
| GATGTACATCCAAGTTTGCA+TGG | 0.533457 | 1.3:-21987361 | MS.gene91116:CDS |
| AAGAAGAGAAGAGACGACAG+AGG | 0.537947 | 1.3:-21986017 | MS.gene91116:CDS |
| GCTTGCATCTGTCACACCAT+TGG | 0.541601 | 1.3:-21987807 | MS.gene91116:CDS |
| TATGTTGATGGAGCTGGAAA+GGG | 0.541861 | 1.3:-21988229 | MS.gene91116:CDS |
| GATGTGAGTGTCAGCAGCAC+AGG | 0.543972 | 1.3:-21987674 | MS.gene91116:CDS |
| CATTGAATCACAAATAGTAA+AGG | 0.552349 | 1.3:-21986612 | MS.gene91116:CDS |
| TCATATGTAGGTACGTTTGG+TGG | 0.552696 | 1.3:-21986079 | MS.gene91116:intron |
| CAACACTAATAGCTGCACTC+GGG | 0.560451 | 1.3:-21988113 | MS.gene91116:CDS |
| TATAAGCAAAACACTAGCAT+GGG | 0.560713 | 1.3:-21986226 | MS.gene91116:CDS |
| ATAACACTCGGTACAGTGCT+GGG | 0.566360 | 1.3:-21986405 | MS.gene91116:CDS |
| TTAATGCACTAGCTTTCTCA+GGG | 0.568025 | 1.3:+21986774 | None:intergenic |
| TTATAAGCAAAACACTAGCA+TGG | 0.571122 | 1.3:-21986227 | MS.gene91116:CDS |
| TTCTCAAGTTAAAAGCAGAA+AGG | 0.571810 | 1.3:-21987276 | MS.gene91116:CDS |
| GTCGGCTATGGCAATGGCAA+TGG | 0.575373 | 1.3:-21985464 | MS.gene91116:CDS |
| TTTGAACTTAAACTTGGGGA+GGG | 0.579865 | 1.3:+21985249 | None:intergenic |
| CGTGCAAATGGCAACAGCGT+CGG | 0.582083 | 1.3:-21985482 | MS.gene91116:CDS |
| GGAACATGATATGAGCTCTC+CGG | 0.585065 | 1.3:-21988091 | MS.gene91116:intron |
| GAGTTCCGTCGAGGTGTAGG+AGG | 0.590544 | 1.3:+21985434 | None:intergenic |
| GCAACACTAATAGCTGCACT+CGG | 0.600020 | 1.3:-21988114 | MS.gene91116:CDS |
| ATGAAAGCGTGCTTTGATGT+TGG | 0.600513 | 1.3:+21988167 | None:intergenic |
| TTTCCAGCTCCATCAACATA+CGG | 0.601579 | 1.3:+21988232 | None:intergenic |
| ATTAGCAATAGCACATTGGA+AGG | 0.604701 | 1.3:-21987313 | MS.gene91116:CDS |
| AATGAGGTGCATTCTCTCTG+TGG | 0.607233 | 1.3:-21987418 | MS.gene91116:CDS |
| TTGAACTTAAACTTGGGGAG+GGG | 0.607474 | 1.3:+21985250 | None:intergenic |
| ACTCGGTACAGTGCTGGGCG+AGG | 0.608408 | 1.3:-21986400 | MS.gene91116:CDS |
| AAGCAAAACACTAGCATGGG+AGG | 0.611536 | 1.3:-21986223 | MS.gene91116:CDS |
| TAACAGATAGGATTGATAAG+TGG | 0.615452 | 1.3:-21986559 | MS.gene91116:CDS |
| ATGTACATCCAAGTTTGCAT+GGG | 0.615491 | 1.3:-21987360 | MS.gene91116:CDS |
| ATTGCAAGACTTTCTGAAGT+CGG | 0.617924 | 1.3:+21987446 | None:intergenic |
| ATGTTAGCTAATAGTTCACA+AGG | 0.618604 | 1.3:+21986632 | None:intergenic |
| CGATATTGGAGAGAGCGAGA+AGG | 0.619852 | 1.3:-21988262 | MS.gene91116:CDS |
| GTGAGTGTCAGCAGCACAGG+TGG | 0.627088 | 1.3:-21987671 | MS.gene91116:CDS |
| TAATATTAGCAATAGCACAT+TGG | 0.628365 | 1.3:-21987317 | MS.gene91116:CDS |
| CTATGCCTCCTACACCTCGA+CGG | 0.629673 | 1.3:-21985439 | MS.gene91116:CDS |
| AGCTTTAGAAAGACAAACAA+CGG | 0.630355 | 1.3:-21985509 | MS.gene91116:CDS |
| AGAAGAGAAGAGACGACAGA+GGG | 0.631005 | 1.3:-21986016 | MS.gene91116:intron |
| TTAATCTGAAACGTGCAGAA+CGG | 0.636397 | 1.3:-21986369 | MS.gene91116:CDS |
| AGTCTTGCAATGTGTGAATG+AGG | 0.639710 | 1.3:-21987434 | MS.gene91116:CDS |
| AACACTAATAGCTGCACTCG+GGG | 0.641813 | 1.3:-21988112 | MS.gene91116:CDS |
| AAGTTTGCATGGGACTCAGG+TGG | 0.643834 | 1.3:-21987350 | MS.gene91116:CDS |
| GTGGCTGTTTGCTTGTGAAG+AGG | 0.648627 | 1.3:-21986540 | MS.gene91116:CDS |
| ACTAGTGATAGGACTTCCAA+TGG | 0.653569 | 1.3:+21989206 | None:intergenic |
| TCCGTTATGACGACCAGAGT+AGG | 0.653657 | 1.3:+21985373 | None:intergenic |
| GGGAATTTCAGGATAACACT+CGG | 0.667546 | 1.3:-21986417 | MS.gene91116:intron |
| GGTATAGCCACAAAGTTGAG+AGG | 0.671097 | 1.3:+21985317 | None:intergenic |
| ACTCAGATAGAAAAGATAAG+CGG | 0.674236 | 1.3:-21987728 | MS.gene91116:CDS |
| CCGCTCATTGAGTTCCGTCG+AGG | 0.692714 | 1.3:+21985425 | None:intergenic |
| TTATAGGAGAAAGGTTGACG+AGG | 0.725409 | 1.3:-21988193 | MS.gene91116:CDS |
| TGACGACCAGAGTAGGAGCG+CGG | 0.732672 | 1.3:+21985380 | None:intergenic |
| CCTCGACGGAACTCAATGAG+CGG | 0.735513 | 1.3:-21985425 | MS.gene91116:CDS |
| TAATGCACTAGCTTTCTCAG+GGG | 0.766836 | 1.3:+21986775 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAGTACAATTAAAATATT+AGG | + | chr1.3:21987301-21987320 | None:intergenic | 10.0% |
| !! | AATTGAAAATTTCACTATAT+TGG | - | chr1.3:21985796-21985815 | MS.gene91116:intron | 15.0% |
| !! | ATTAACAATAGTAATTAAGT+TGG | + | chr1.3:21988826-21988845 | None:intergenic | 15.0% |
| !! | ATTATAACAAATAATAAGAC+TGG | + | chr1.3:21987264-21987283 | None:intergenic | 15.0% |
| !!! | TAAAAAATCAATTTTATGCA+TGG | - | chr1.3:21986434-21986453 | MS.gene91116:intron | 15.0% |
| !!! | TTTTATTGTAAATTTTCATG+TGG | - | chr1.3:21985745-21985764 | MS.gene91116:intron | 15.0% |
| !! | AAAAAAGCGAATCAATAATA+TGG | + | chr1.3:21986018-21986037 | None:intergenic | 20.0% |
| !! | AAACATGGAAAATATATGAA+AGG | + | chr1.3:21987527-21987546 | None:intergenic | 20.0% |
| !! | AAATGCTTATAGGAAAATAT+GGG | + | chr1.3:21988495-21988514 | None:intergenic | 20.0% |
| !! | AATTTATTTCCTGTGTAAAT+TGG | - | chr1.3:21988712-21988731 | MS.gene91116:intron | 20.0% |
| !! | ATATAGAAGTAATTATGCAT+TGG | - | chr1.3:21988799-21988818 | MS.gene91116:intron | 20.0% |
| !! | GAAAATTCATGATAAAATGA+TGG | - | chr1.3:21986052-21986071 | MS.gene91116:CDS | 20.0% |
| !! | GAAGTAACAAATAAAGAAAA+AGG | + | chr1.3:21986134-21986153 | None:intergenic | 20.0% |
| !! | GGAATTTATATAGATTAAGA+TGG | - | chr1.3:21986611-21986630 | MS.gene91116:CDS | 20.0% |
| !! | GTAATAAAATATACATAAGC+AGG | + | chr1.3:21988588-21988607 | None:intergenic | 20.0% |
| !! | TTACACAGGAAATAAATTAA+GGG | + | chr1.3:21988710-21988729 | None:intergenic | 20.0% |
| !! | TTGATGTATTAATATACTTG+AGG | - | chr1.3:21986567-21986586 | MS.gene91116:CDS | 20.0% |
| !! | TTTACACAGGAAATAAATTA+AGG | + | chr1.3:21988711-21988730 | None:intergenic | 20.0% |
| !!! | AAATAAATTAAGGGTACAAA+AGG | + | chr1.3:21988701-21988720 | None:intergenic | 20.0% |
| !!! | TACTTCAATTTTTTTACCTT+TGG | - | chr1.3:21986148-21986167 | MS.gene91116:intron | 20.0% |
| !!! | TGTAGGTTATTTTATTGTAA+GGG | - | chr1.3:21985628-21985647 | MS.gene91116:intron | 20.0% |
| !!! | TTGGTTTTGTTAACAAATTT+TGG | - | chr1.3:21985815-21985834 | MS.gene91116:intron | 20.0% |
| ! | AAAGAACAAAGATCAATTTG+AGG | + | chr1.3:21988527-21988546 | None:intergenic | 25.0% |
| ! | AAATCCCATATTAACTGAAT+TGG | + | chr1.3:21985847-21985866 | None:intergenic | 25.0% |
| ! | AATACATCAAAAAGCTTACA+TGG | + | chr1.3:21986557-21986576 | None:intergenic | 25.0% |
| ! | AGTTACCAATTCAGTTAATA+TGG | - | chr1.3:21985839-21985858 | MS.gene91116:intron | 25.0% |
| ! | ATGAAAGGAAAAAATGATGA+TGG | + | chr1.3:21987512-21987531 | None:intergenic | 25.0% |
| ! | CAAATGCTTATAGGAAAATA+TGG | + | chr1.3:21988496-21988515 | None:intergenic | 25.0% |
| ! | CAAGTCATTTATGTATTTAC+CGG | + | chr1.3:21986400-21986419 | None:intergenic | 25.0% |
| ! | CATTGAATCACAAATAGTAA+AGG | - | chr1.3:21987857-21987876 | MS.gene91116:intron | 25.0% |
| ! | GTTACCAATTCAGTTAATAT+GGG | - | chr1.3:21985840-21985859 | MS.gene91116:intron | 25.0% |
| ! | TAAAATATTAGGCTAAAGAG+AGG | + | chr1.3:21987290-21987309 | None:intergenic | 25.0% |
| ! | TAATATTAGCAATAGCACAT+TGG | - | chr1.3:21987152-21987171 | MS.gene91116:intron | 25.0% |
| ! | TATTGTTAATAATCCACTTC+TGG | - | chr1.3:21988836-21988855 | MS.gene91116:intron | 25.0% |
| ! | TGAAGAAGAAAAAAGAAGAA+AGG | - | chr1.3:21986694-21986713 | MS.gene91116:intron | 25.0% |
| ! | TGTTATAAACTACACTTACT+AGG | + | chr1.3:21988560-21988579 | None:intergenic | 25.0% |
| !! | AAAATCAATTTTATGCATGG+TGG | - | chr1.3:21986437-21986456 | MS.gene91116:intron | 25.0% |
| !! | ATTTTATTGTAAGGGAGAAA+GGG | - | chr1.3:21985636-21985655 | MS.gene91116:intron | 25.0% |
| !! | TATTTTATTGTAAGGGAGAA+AGG | - | chr1.3:21985635-21985654 | MS.gene91116:intron | 25.0% |
| !!! | AAAAATGACTTTTTCAACTC+AGG | + | chr1.3:21985690-21985709 | None:intergenic | 25.0% |
| !!! | AAGACTTGTTTTCTATATGA+TGG | - | chr1.3:21988277-21988296 | MS.gene91116:intron | 25.0% |
| !!! | AGACTTGTTTTCTATATGAT+GGG | - | chr1.3:21988278-21988297 | MS.gene91116:intron | 25.0% |
| !!! | CTAAAGCTGTTAGTTTTTTT+TGG | + | chr1.3:21988948-21988967 | None:intergenic | 25.0% |
| !!! | CTGTAGGTTATTTTATTGTA+AGG | - | chr1.3:21985627-21985646 | MS.gene91116:intron | 25.0% |
| !!! | CTTTTTAAAAATGCAGTTGA+AGG | - | chr1.3:21987316-21987335 | MS.gene91116:CDS | 25.0% |
| !!! | GTGTAGAACATTTAATTTGA+TGG | - | chr1.3:21988734-21988753 | MS.gene91116:intron | 25.0% |
| !!! | TGTGACTTTTTCTTACAAAT+AGG | + | chr1.3:21988644-21988663 | None:intergenic | 25.0% |
| !!! | TGTTTTTTTTCAAAATGACG+AGG | - | chr1.3:21985381-21985400 | MS.gene91116:CDS | 25.0% |
| !!! | TTTAAAAGAGAAAGCACTTA+TGG | - | chr1.3:21985593-21985612 | MS.gene91116:CDS | 25.0% |
| AAAAATTTCTGTCAGACCAA+AGG | + | chr1.3:21988615-21988634 | None:intergenic | 30.0% | |
| AAAATTTCTGTCAGACCAAA+GGG | + | chr1.3:21988614-21988633 | None:intergenic | 30.0% | |
| AAATGAGATTTGTCAACCAA+AGG | + | chr1.3:21986167-21986186 | None:intergenic | 30.0% | |
| AAATTCACGTTAATGCAACA+GGG | + | chr1.3:21987737-21987756 | None:intergenic | 30.0% | |
| AAGAACTCGTATTTAAGAAG+AGG | - | chr1.3:21987616-21987635 | MS.gene91116:CDS | 30.0% | |
| AATAATAAGACTGGAGCTTA+AGG | + | chr1.3:21987255-21987274 | None:intergenic | 30.0% | |
| AATCAAAAGGAAGCCATATA+TGG | - | chr1.3:21988909-21988928 | MS.gene91116:intron | 30.0% | |
| ACTCAGATAGAAAAGATAAG+CGG | - | chr1.3:21986741-21986760 | MS.gene91116:intron | 30.0% | |
| AGATCTACTCCTAAATCAAA+AGG | - | chr1.3:21988896-21988915 | MS.gene91116:intron | 30.0% | |
| ATAATAAGACTGGAGCTTAA+GGG | + | chr1.3:21987254-21987273 | None:intergenic | 30.0% | |
| ATCAAAAGGAAGCCATATAT+GGG | - | chr1.3:21988910-21988929 | MS.gene91116:intron | 30.0% | |
| ATGTTAGCTAATAGTTCACA+AGG | + | chr1.3:21987840-21987859 | None:intergenic | 30.0% | |
| CTTAGATGTTTATAGGAGAA+AGG | - | chr1.3:21986267-21986286 | MS.gene91116:intron | 30.0% | |
| CTTATATGGATACTAGTGAT+AGG | + | chr1.3:21985277-21985296 | None:intergenic | 30.0% | |
| GACAAACAACAAATGCTTAT+AGG | + | chr1.3:21988505-21988524 | None:intergenic | 30.0% | |
| GAGAAGAAACAAAACATCAT+TGG | + | chr1.3:21985547-21985566 | None:intergenic | 30.0% | |
| GAGAGAATTACAAACTTACT+TGG | + | chr1.3:21987977-21987996 | None:intergenic | 30.0% | |
| GTAACTATAACCAAAATTCC+AGG | - | chr1.3:21988129-21988148 | MS.gene91116:CDS | 30.0% | |
| TAACAGATAGGATTGATAAG+TGG | - | chr1.3:21987910-21987929 | MS.gene91116:intron | 30.0% | |
| TATAAGCAAAACACTAGCAT+GGG | - | chr1.3:21988243-21988262 | MS.gene91116:CDS | 30.0% | |
| TATAGAATGAGTCTCTTGAT+TGG | - | chr1.3:21985958-21985977 | MS.gene91116:intron | 30.0% | |
| TATGACATTGTATCTTCCTT+AGG | + | chr1.3:21989176-21989195 | None:intergenic | 30.0% | |
| TATGCAAAGTCTATCCTATT+TGG | + | chr1.3:21985940-21985959 | None:intergenic | 30.0% | |
| TCAAATTCCAAAGTTCGAAT+AGG | + | chr1.3:21987355-21987374 | None:intergenic | 30.0% | |
| TGATTGTCAATGTCATATGT+AGG | - | chr1.3:21988378-21988397 | MS.gene91116:intron | 30.0% | |
| TTATAAGCAAAACACTAGCA+TGG | - | chr1.3:21988242-21988261 | MS.gene91116:CDS | 30.0% | |
| TTCAACAGAGATAATAGAGA+AGG | - | chr1.3:21987466-21987485 | MS.gene91116:intron | 30.0% | |
| TTCTCAAGTTAAAAGCAGAA+AGG | - | chr1.3:21987193-21987212 | MS.gene91116:intron | 30.0% | |
| ! | ATATTTTATTACTCCCCCTT+TGG | - | chr1.3:21988596-21988615 | MS.gene91116:intron | 30.0% |
| ! | TTTTATTGTAAGGGAGAAAG+GGG | - | chr1.3:21985637-21985656 | MS.gene91116:intron | 30.0% |
| ! | TTTTCAAAATGACGAGGTTT+TGG | - | chr1.3:21985387-21985406 | MS.gene91116:CDS | 30.0% |
| !! | AGAAAGCACTTATGGTTATA+GGG | - | chr1.3:21985601-21985620 | MS.gene91116:intron | 30.0% |
| !! | AGCTTTAGAAAGACAAACAA+CGG | - | chr1.3:21988960-21988979 | MS.gene91116:intron | 30.0% |
| !! | ATTCGAACTTTGGAATTTGA+TGG | - | chr1.3:21987355-21987374 | MS.gene91116:CDS | 30.0% |
| !! | CAATCTACCTATTTTGAGAA+GGG | - | chr1.3:21986527-21986546 | MS.gene91116:CDS | 30.0% |
| !! | GACTTGTTTTCTATATGATG+GGG | - | chr1.3:21988279-21988298 | MS.gene91116:intron | 30.0% |
| !! | TCAATCTACCTATTTTGAGA+AGG | - | chr1.3:21986526-21986545 | MS.gene91116:CDS | 30.0% |
| !!! | ATATGGCTTCCTTTTGATTT+AGG | + | chr1.3:21988908-21988927 | None:intergenic | 30.0% |
| !!! | ATGATGTTTTGTTTCTTCTC+AGG | - | chr1.3:21985547-21985566 | MS.gene91116:CDS | 30.0% |
| !!! | CTGTTAGTTTTTTTTGGACT+AGG | + | chr1.3:21988942-21988961 | None:intergenic | 30.0% |
| !!! | GAATCCTCTATTTTTGATAC+AGG | - | chr1.3:21987804-21987823 | MS.gene91116:CDS | 30.0% |
| !!! | GGTCTGACAGAAATTTTTTT+TGG | - | chr1.3:21988617-21988636 | MS.gene91116:intron | 30.0% |
| !!! | TATGGGATTTTAGTTTGACT+TGG | - | chr1.3:21985857-21985876 | MS.gene91116:intron | 30.0% |
| !!! | TTCTGCTTTTAACTTGAGAA+TGG | + | chr1.3:21987193-21987212 | None:intergenic | 30.0% |
| AAAGCACATTTCAGCAAACA+TGG | + | chr1.3:21987542-21987561 | None:intergenic | 35.0% | |
| AAATTTCTGTCAGACCAAAG+GGG | + | chr1.3:21988613-21988632 | None:intergenic | 35.0% | |
| AAGTGCAAGTAGTGCTTATA+TGG | + | chr1.3:21985291-21985310 | None:intergenic | 35.0% | |
| AATAAATGAACGCTCTTCGA+TGG | - | chr1.3:21986915-21986934 | MS.gene91116:intron | 35.0% | |
| ACTAGGTTTAGACCCATATA+TGG | + | chr1.3:21988925-21988944 | None:intergenic | 35.0% | |
| ACTCGTATTTAAGAAGAGGT+TGG | - | chr1.3:21987620-21987639 | MS.gene91116:CDS | 35.0% | |
| ATAAGATTGTCAACCATTGC+TGG | + | chr1.3:21988226-21988245 | None:intergenic | 35.0% | |
| ATAGAGGATTCGATAGTATC+AGG | + | chr1.3:21987795-21987814 | None:intergenic | 35.0% | |
| ATAGGAAAATATGGGCAAAG+AGG | + | chr1.3:21988487-21988506 | None:intergenic | 35.0% | |
| ATGTACATCCAAGTTTGCAT+GGG | - | chr1.3:21987109-21987128 | MS.gene91116:CDS | 35.0% | |
| ATGTCATATGTAGGTACGTT+TGG | - | chr1.3:21988387-21988406 | MS.gene91116:intron | 35.0% | |
| ATTAGCAATAGCACATTGGA+AGG | - | chr1.3:21987156-21987175 | MS.gene91116:intron | 35.0% | |
| CAAAAACAGAAAACCAGAAG+TGG | + | chr1.3:21988852-21988871 | None:intergenic | 35.0% | |
| CAAAACGCGCAAAATTATAG+AGG | + | chr1.3:21986480-21986499 | None:intergenic | 35.0% | |
| CAAATTCACGTTAATGCAAC+AGG | + | chr1.3:21987738-21987757 | None:intergenic | 35.0% | |
| CAAGCCTGTATCAAAAATAG+AGG | + | chr1.3:21987811-21987830 | None:intergenic | 35.0% | |
| CAGCAAATATGGAACGATAT+TGG | - | chr1.3:21986193-21986212 | MS.gene91116:CDS | 35.0% | |
| GATGTACATCATCTACTGTT+TGG | + | chr1.3:21987098-21987117 | None:intergenic | 35.0% | |
| GCTAGTGCATTAATAGATTC+CGG | - | chr1.3:21987705-21987724 | MS.gene91116:CDS | 35.0% | |
| GGGAATGCTTAGATGTTTAT+AGG | - | chr1.3:21986260-21986279 | MS.gene91116:intron | 35.0% | |
| GTAGAAGAGAAGTAACAGAT+AGG | - | chr1.3:21987898-21987917 | MS.gene91116:intron | 35.0% | |
| GTGAAAACCAGAAATAACCA+TGG | + | chr1.3:21988321-21988340 | None:intergenic | 35.0% | |
| TCACATCATCATTGACAGTA+TGG | + | chr1.3:21986782-21986801 | None:intergenic | 35.0% | |
| TCCTATTTGGCAAAAACAAC+AGG | + | chr1.3:21985927-21985946 | None:intergenic | 35.0% | |
| TGGAACTTTCAGCAACAAAT+AGG | + | chr1.3:21988172-21988191 | None:intergenic | 35.0% | |
| TGTTCTACACCAATTTACAC+AGG | + | chr1.3:21988724-21988743 | None:intergenic | 35.0% | |
| TTCTTCAATTCTTCGACCAA+TGG | + | chr1.3:21986681-21986700 | None:intergenic | 35.0% | |
| TTCTTTGCTCAAAGAACTTG+AGG | - | chr1.3:21985309-21985328 | MS.gene91116:CDS | 35.0% | |
| TTGCTTGTGAAGAGGAAAAT+TGG | - | chr1.3:21987937-21987956 | MS.gene91116:intron | 35.0% | |
| ! | AAGAGAGAAACTCTTTTCTG+AGG | - | chr1.3:21987390-21987409 | MS.gene91116:CDS | 35.0% |
| ! | AAGGAAATCTAGAGTACAGA+AGG | - | chr1.3:21987212-21987231 | MS.gene91116:intron | 35.0% |
| ! | CATTTTGTGTGCAGCAAATA+TGG | - | chr1.3:21986182-21986201 | MS.gene91116:intron | 35.0% |
| ! | GTAGATCTTGCATCTTCTTT+TGG | + | chr1.3:21988884-21988903 | None:intergenic | 35.0% |
| ! | TGGTTTTCCCTTCTCAAAAT+AGG | + | chr1.3:21986537-21986556 | None:intergenic | 35.0% |
| ! | TTAATCTGAAACGTGCAGAA+CGG | - | chr1.3:21988100-21988119 | MS.gene91116:CDS | 35.0% |
| ! | TTTGTGCATTTTTCTGTGCT+TGG | - | chr1.3:21986982-21987001 | MS.gene91116:intron | 35.0% |
| !! | ATTAATGCACTAGCTTTCTC+AGG | + | chr1.3:21987699-21987718 | None:intergenic | 35.0% |
| !! | ATTGCAAGACTTTCTGAAGT+CGG | + | chr1.3:21987026-21987045 | None:intergenic | 35.0% |
| !! | CTTTCTGATCGATTTGTATG+TGG | - | chr1.3:21986590-21986609 | MS.gene91116:CDS | 35.0% |
| !! | GAGAAAGCACTTATGGTTAT+AGG | - | chr1.3:21985600-21985619 | MS.gene91116:intron | 35.0% |
| !! | GTTGATGATGATGAATAGTG+TGG | - | chr1.3:21985457-21985476 | MS.gene91116:CDS | 35.0% |
| !! | TTAATGCACTAGCTTTCTCA+GGG | + | chr1.3:21987698-21987717 | None:intergenic | 35.0% |
| !!! | CTCTATTTTTGATACAGGCT+TGG | - | chr1.3:21987809-21987828 | MS.gene91116:CDS | 35.0% |
| !!! | CTTCGCAGAGTTATTTTTAG+CGG | - | chr1.3:21988344-21988363 | MS.gene91116:intron | 35.0% |
| !!! | GGTTTTCTGTTTTTGATCTC+AGG | - | chr1.3:21988857-21988876 | MS.gene91116:intron | 35.0% |
| !!! | TCCTGTTGTTTTTGCCAAAT+AGG | - | chr1.3:21985923-21985942 | MS.gene91116:intron | 35.0% |
| AACAACGGTTATCGTGCAAA+TGG | - | chr1.3:21988975-21988994 | MS.gene91116:intron | 40.0% | |
| AAGATAAGCGGTGAGATTTG+TGG | - | chr1.3:21986753-21986772 | MS.gene91116:intron | 40.0% | |
| AATTTCTGTCAGACCAAAGG+GGG | + | chr1.3:21988612-21988631 | None:intergenic | 40.0% | |
| ACCCTACTAGAGGTAGTAAA+AGG | - | chr1.3:21988765-21988784 | MS.gene91116:intron | 40.0% | |
| ACTAGTGATAGGACTTCCAA+TGG | + | chr1.3:21985266-21985285 | None:intergenic | 40.0% | |
| AGAGAACACACTGTCACTAT+AGG | + | chr1.3:21988201-21988220 | None:intergenic | 40.0% | |
| AGTCTTGCAATGTGTGAATG+AGG | - | chr1.3:21987035-21987054 | MS.gene91116:CDS | 40.0% | |
| ATCCTGAAATTCCCCATATC+AGG | + | chr1.3:21988046-21988065 | None:intergenic | 40.0% | |
| CAACTTTGTGGCTATACCTA+AGG | - | chr1.3:21989157-21989176 | MS.gene91116:intron | 40.0% | |
| CCCTACTAGAGGTAGTAAAA+GGG | - | chr1.3:21988766-21988785 | MS.gene91116:intron | 40.0% | |
| CGCTAAAAATAACTCTGCGA+AGG | + | chr1.3:21988346-21988365 | None:intergenic | 40.0% | |
| CTTGATCTCTGACCTGATAT+GGG | - | chr1.3:21988031-21988050 | MS.gene91116:intron | 40.0% | |
| GAATATCAAACGCATCTTCG+TGG | - | chr1.3:21986858-21986877 | MS.gene91116:CDS | 40.0% | |
| GAATCAGAAATCACCGAAAG+AGG | - | chr1.3:21987437-21987456 | MS.gene91116:CDS | 40.0% | |
| GATGTACATCCAAGTTTGCA+TGG | - | chr1.3:21987108-21987127 | MS.gene91116:CDS | 40.0% | |
| GCATTTATGACAGCAATACC+TGG | + | chr1.3:21988150-21988169 | None:intergenic | 40.0% | |
| GGGAATTTCAGGATAACACT+CGG | - | chr1.3:21988052-21988071 | MS.gene91116:intron | 40.0% | |
| TAAGAAGAGGTTGGAGTTAG+AGG | - | chr1.3:21987629-21987648 | MS.gene91116:CDS | 40.0% | |
| TAATGCAACAGGGAACATAC+CGG | + | chr1.3:21987727-21987746 | None:intergenic | 40.0% | |
| TATGGTTATAGGGTCTCTGT+AGG | - | chr1.3:21985611-21985630 | MS.gene91116:intron | 40.0% | |
| TCATATGTAGGTACGTTTGG+TGG | - | chr1.3:21988390-21988409 | MS.gene91116:intron | 40.0% | |
| TCGCTAACCTATTCGAACTT+TGG | - | chr1.3:21987345-21987364 | MS.gene91116:CDS | 40.0% | |
| TCGTGGTCTTCAAAAGGAAA+AGG | - | chr1.3:21986875-21986894 | MS.gene91116:CDS | 40.0% | |
| TTATAGGAGAAAGGTTGACG+AGG | - | chr1.3:21986276-21986295 | MS.gene91116:intron | 40.0% | |
| TTGATCTCTGACCTGATATG+GGG | - | chr1.3:21988032-21988051 | MS.gene91116:intron | 40.0% | |
| TTTCCAGCTCCATCAACATA+CGG | + | chr1.3:21986240-21986259 | None:intergenic | 40.0% | |
| ! | AAATGTGCTTTTGCAGGCTT+CGG | - | chr1.3:21987551-21987570 | MS.gene91116:intron | 40.0% |
| ! | AAGTGGTCCATGGTTATTTC+TGG | - | chr1.3:21988311-21988330 | MS.gene91116:intron | 40.0% |
| ! | ATGAAAGCGTGCTTTGATGT+TGG | + | chr1.3:21986305-21986324 | None:intergenic | 40.0% |
| ! | CATAGTGCACGTCGATTATT+TGG | - | chr1.3:21988008-21988027 | MS.gene91116:intron | 40.0% |
| ! | CCCTTTTACTACCTCTAGTA+GGG | + | chr1.3:21988769-21988788 | None:intergenic | 40.0% |
| ! | CGTGCACTATGAAAGTATAC+AGG | + | chr1.3:21987999-21988018 | None:intergenic | 40.0% |
| ! | GACAGCAATACCTGGAATTT+TGG | + | chr1.3:21988142-21988161 | None:intergenic | 40.0% |
| ! | GGTACGTTTGGTGGAATTAT+TGG | - | chr1.3:21988399-21988418 | MS.gene91116:intron | 40.0% |
| ! | GGTGTTCTTGGATTGGATTT+CGG | - | chr1.3:21987072-21987091 | MS.gene91116:CDS | 40.0% |
| ! | TAATCTGAAACGTGCAGAAC+GGG | - | chr1.3:21988101-21988120 | MS.gene91116:CDS | 40.0% |
| ! | TATGTTGATGGAGCTGGAAA+GGG | - | chr1.3:21986240-21986259 | MS.gene91116:CDS | 40.0% |
| ! | TCCCTTTTACTACCTCTAGT+AGG | + | chr1.3:21988770-21988789 | None:intergenic | 40.0% |
| ! | TTGCTGAAATGTGCTTTTGC+AGG | - | chr1.3:21987545-21987564 | MS.gene91116:intron | 40.0% |
| !! | TAATGCACTAGCTTTCTCAG+GGG | + | chr1.3:21987697-21987716 | None:intergenic | 40.0% |
| !!! | GCTTGGTTTTTTCTTCCAGT+CGG | - | chr1.3:21986999-21987018 | MS.gene91116:intron | 40.0% |
| AACACTAATAGCTGCACTCG+GGG | - | chr1.3:21986357-21986376 | MS.gene91116:CDS | 45.0% | |
| AAGAAGAGAAGAGACGACAG+AGG | - | chr1.3:21988452-21988471 | MS.gene91116:intron | 45.0% | |
| AAGCAAAACACTAGCATGGG+AGG | - | chr1.3:21988246-21988265 | MS.gene91116:CDS | 45.0% | |
| AATGAGGTGCATTCTCTCTG+TGG | - | chr1.3:21987051-21987070 | MS.gene91116:CDS | 45.0% | |
| AGAAGAGAAGAGACGACAGA+GGG | - | chr1.3:21988453-21988472 | MS.gene91116:intron | 45.0% | |
| ATAACACTCGGTACAGTGCT+GGG | - | chr1.3:21988064-21988083 | MS.gene91116:intron | 45.0% | |
| CAACACTAATAGCTGCACTC+GGG | - | chr1.3:21986356-21986375 | MS.gene91116:CDS | 45.0% | |
| CATTCTCTCTGTGGTGTTCT+TGG | - | chr1.3:21987060-21987079 | MS.gene91116:CDS | 45.0% | |
| CTCTTCTTCTCTCTGTTGTC+TGG | + | chr1.3:21988440-21988459 | None:intergenic | 45.0% | |
| GACCTGATATGGGGAATTTC+AGG | - | chr1.3:21988041-21988060 | MS.gene91116:intron | 45.0% | |
| GCAACACTAATAGCTGCACT+CGG | - | chr1.3:21986355-21986374 | MS.gene91116:CDS | 45.0% | |
| GCATCTTCGTGGTCTTCAAA+AGG | - | chr1.3:21986869-21986888 | MS.gene91116:CDS | 45.0% | |
| GCTTGATCTCTGACCTGATA+TGG | - | chr1.3:21988030-21988049 | MS.gene91116:intron | 45.0% | |
| GGAACATGATATGAGCTCTC+CGG | - | chr1.3:21986378-21986397 | MS.gene91116:CDS | 45.0% | |
| GGACAAAGACCGTATGTTGA+TGG | - | chr1.3:21986228-21986247 | MS.gene91116:CDS | 45.0% | |
| GGTATAGCCACAAAGTTGAG+AGG | + | chr1.3:21989155-21989174 | None:intergenic | 45.0% | |
| GTAAGCTTCAAAGTGGTCCA+TGG | - | chr1.3:21988301-21988320 | MS.gene91116:intron | 45.0% | |
| GTGTGTTCTCTTTCCAGCAA+TGG | - | chr1.3:21988210-21988229 | MS.gene91116:CDS | 45.0% | |
| TACTGCACCTCTCAACTTTG+TGG | - | chr1.3:21989145-21989164 | MS.gene91116:intron | 45.0% | |
| TCCTACTCTGGTCGTCATAA+CGG | - | chr1.3:21989095-21989114 | MS.gene91116:intron | 45.0% | |
| TCTCTGTGGTGTTCTTGGAT+TGG | - | chr1.3:21987065-21987084 | MS.gene91116:CDS | 45.0% | |
| TGATGGGGTAAGCTTCAAAG+TGG | - | chr1.3:21988294-21988313 | MS.gene91116:intron | 45.0% | |
| TGTTGCAATCTCAGCTTCCT+TGG | + | chr1.3:21986341-21986360 | None:intergenic | 45.0% | |
| TTGTTGCTGAAAGTTCCACG+TGG | - | chr1.3:21988174-21988193 | MS.gene91116:CDS | 45.0% | |
| ! | GTATGTTGATGGAGCTGGAA+AGG | - | chr1.3:21986239-21986258 | MS.gene91116:CDS | 45.0% |
| !! | TGTTGAAAGAGCGCCTCTTT+CGG | + | chr1.3:21987453-21987472 | None:intergenic | 45.0% |
| AAGTTTGCATGGGACTCAGG+TGG | - | chr1.3:21987119-21987138 | MS.gene91116:CDS | 50.0% | |
| ACCTGAGTCCCATGCAAACT+TGG | + | chr1.3:21987120-21987139 | None:intergenic | 50.0% | |
| ACTGTCACTATAGGTCCACG+TGG | + | chr1.3:21988192-21988211 | None:intergenic | 50.0% | |
| ATTGAGTTCCGTCGAGGTGT+AGG | + | chr1.3:21989041-21989060 | None:intergenic | 50.0% | |
| CGATATTGGAGAGAGCGAGA+AGG | - | chr1.3:21986207-21986226 | MS.gene91116:CDS | 50.0% | |
| GATAACACTCGGTACAGTGC+TGG | - | chr1.3:21988063-21988082 | MS.gene91116:intron | 50.0% | |
| GCTTGCATCTGTCACACCAT+TGG | - | chr1.3:21986662-21986681 | MS.gene91116:intron | 50.0% | |
| GGCTGTCTTAACCCTACTAG+AGG | - | chr1.3:21988755-21988774 | MS.gene91116:intron | 50.0% | |
| GTGGCTGTTTGCTTGTGAAG+AGG | - | chr1.3:21987929-21987948 | MS.gene91116:intron | 50.0% | |
| TCAGGGGCAGTACTTGTATC+AGG | + | chr1.3:21987681-21987700 | None:intergenic | 50.0% | |
| TCATCAATCCCTTGCAGCCA+AGG | - | chr1.3:21986321-21986340 | MS.gene91116:intron | 50.0% | |
| TCCAAGTTTGCATGGGACTC+AGG | - | chr1.3:21987116-21987135 | MS.gene91116:CDS | 50.0% | |
| TCCGTTATGACGACCAGAGT+AGG | + | chr1.3:21989099-21989118 | None:intergenic | 50.0% | |
| TTAAACTTGGGGAGGGGACT+CGG | + | chr1.3:21989216-21989235 | None:intergenic | 50.0% | |
| ! | AGACCGTATGTTGATGGAGC+TGG | - | chr1.3:21986234-21986253 | MS.gene91116:CDS | 50.0% |
| CCTCGACGGAACTCAATGAG+CGG | - | chr1.3:21989044-21989063 | MS.gene91116:intron | 55.0% | |
| CGTGCAAATGGCAACAGCGT+CGG | - | chr1.3:21988987-21989006 | MS.gene91116:intron | 55.0% | |
| CTATGCCTCCTACACCTCGA+CGG | - | chr1.3:21989030-21989049 | MS.gene91116:intron | 55.0% | |
| CTCAGCTTCCTTGGCTGCAA+GGG | + | chr1.3:21986332-21986351 | None:intergenic | 55.0% | |
| GATGTGAGTGTCAGCAGCAC+AGG | - | chr1.3:21986795-21986814 | MS.gene91116:CDS | 55.0% | |
| GTCGGCTATGGCAATGGCAA+TGG | - | chr1.3:21989005-21989024 | MS.gene91116:intron | 55.0% | |
| TAAACTTGGGGAGGGGACTC+GGG | + | chr1.3:21989215-21989234 | None:intergenic | 55.0% | |
| TCTCAGCTTCCTTGGCTGCA+AGG | + | chr1.3:21986333-21986352 | None:intergenic | 55.0% | |
| TTTGCAGGCTTCGGCAGAAG+TGG | - | chr1.3:21987560-21987579 | MS.gene91116:intron | 55.0% | |
| !! | AACAGCGTCGGCTATGGCAA+TGG | - | chr1.3:21988999-21989018 | MS.gene91116:intron | 55.0% |
| !! | AATGGCAACAGCGTCGGCTA+TGG | - | chr1.3:21988993-21989012 | MS.gene91116:intron | 55.0% |
| !! | CTTTCTGAAGTCGGTCCGAC+TGG | + | chr1.3:21987017-21987036 | None:intergenic | 55.0% |
| CCGCTCATTGAGTTCCGTCG+AGG | + | chr1.3:21989047-21989066 | None:intergenic | 60.0% | |
| GAGTTCCGTCGAGGTGTAGG+AGG | + | chr1.3:21989038-21989057 | None:intergenic | 60.0% | |
| GTGAGTGTCAGCAGCACAGG+TGG | - | chr1.3:21986798-21986817 | MS.gene91116:CDS | 60.0% | |
| TGACGACCAGAGTAGGAGCG+CGG | + | chr1.3:21989092-21989111 | None:intergenic | 60.0% | |
| CACACACCGCGCTCCTACTC+TGG | - | chr1.3:21989083-21989102 | MS.gene91116:intron | 65.0% | |
| TTGGGGAGGGGACTCGGGTT+CGG | + | chr1.3:21989210-21989229 | None:intergenic | 65.0% | |
| ! | ACTCGGTACAGTGCTGGGCG+AGG | - | chr1.3:21988069-21988088 | MS.gene91116:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 21985256 | 21989235 | 21985256 | ID=MS.gene91116 |
| chr1.3 | mRNA | 21985256 | 21989235 | 21985256 | ID=MS.gene91116.t1;Parent=MS.gene91116 |
| chr1.3 | exon | 21989161 | 21989235 | 21989161 | ID=MS.gene91116.t1.exon1;Parent=MS.gene91116.t1 |
| chr1.3 | CDS | 21989161 | 21989235 | 21989161 | ID=cds.MS.gene91116.t1;Parent=MS.gene91116.t1 |
| chr1.3 | exon | 21988092 | 21988295 | 21988092 | ID=MS.gene91116.t1.exon2;Parent=MS.gene91116.t1 |
| chr1.3 | CDS | 21988092 | 21988295 | 21988092 | ID=cds.MS.gene91116.t1;Parent=MS.gene91116.t1 |
| chr1.3 | exon | 21987595 | 21987867 | 21987595 | ID=MS.gene91116.t1.exon3;Parent=MS.gene91116.t1 |
| chr1.3 | CDS | 21987595 | 21987867 | 21987595 | ID=cds.MS.gene91116.t1;Parent=MS.gene91116.t1 |
| chr1.3 | exon | 21987258 | 21987473 | 21987258 | ID=MS.gene91116.t1.exon4;Parent=MS.gene91116.t1 |
| chr1.3 | CDS | 21987258 | 21987473 | 21987258 | ID=cds.MS.gene91116.t1;Parent=MS.gene91116.t1 |
| chr1.3 | exon | 21987004 | 21987159 | 21987004 | ID=MS.gene91116.t1.exon5;Parent=MS.gene91116.t1 |
| chr1.3 | CDS | 21987004 | 21987159 | 21987004 | ID=cds.MS.gene91116.t1;Parent=MS.gene91116.t1 |
| chr1.3 | exon | 21986765 | 21986924 | 21986765 | ID=MS.gene91116.t1.exon6;Parent=MS.gene91116.t1 |
| chr1.3 | CDS | 21986765 | 21986924 | 21986765 | ID=cds.MS.gene91116.t1;Parent=MS.gene91116.t1 |
| chr1.3 | exon | 21986514 | 21986665 | 21986514 | ID=MS.gene91116.t1.exon7;Parent=MS.gene91116.t1 |
| chr1.3 | CDS | 21986514 | 21986665 | 21986514 | ID=cds.MS.gene91116.t1;Parent=MS.gene91116.t1 |
| chr1.3 | exon | 21986341 | 21986428 | 21986341 | ID=MS.gene91116.t1.exon8;Parent=MS.gene91116.t1 |
| chr1.3 | CDS | 21986341 | 21986428 | 21986341 | ID=cds.MS.gene91116.t1;Parent=MS.gene91116.t1 |
| chr1.3 | exon | 21986191 | 21986264 | 21986191 | ID=MS.gene91116.t1.exon9;Parent=MS.gene91116.t1 |
| chr1.3 | CDS | 21986191 | 21986264 | 21986191 | ID=cds.MS.gene91116.t1;Parent=MS.gene91116.t1 |
| chr1.3 | exon | 21986017 | 21986091 | 21986017 | ID=MS.gene91116.t1.exon10;Parent=MS.gene91116.t1 |
| chr1.3 | CDS | 21986017 | 21986091 | 21986017 | ID=cds.MS.gene91116.t1;Parent=MS.gene91116.t1 |
| chr1.3 | exon | 21985256 | 21985612 | 21985256 | ID=MS.gene91116.t1.exon11;Parent=MS.gene91116.t1 |
| chr1.3 | CDS | 21985256 | 21985612 | 21985256 | ID=cds.MS.gene91116.t1;Parent=MS.gene91116.t1 |
| Gene Sequence |
| Protein sequence |
