AlfalfaGEDB | MS.gene98735

M. sativa cultivar XinJiangDaYe / MS.gene98735

KEGG: -
GO: -
PFAM: PF03514.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene98735.t1	XP_013465454.1	96.4	444	16	0	1	444	9	452	1.00E-250	875.5

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene98735.t1	Q9SZF7	51.1	405	166	9	59	444	139	530	4.6e-111	402.9

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene98735.t1	A0A072VBU1	96.4	444	16	0	1	444	9	452	7.3e-251	875.5

TFs/TRs:

Gene ID	Type	Classification
MS.gene98735.t1	TF	GRAS

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049142	MS.gene98735	0.81977	9.75E-53	-1.69E-46
MS.gene049350	MS.gene98735	0.838965	2.10E-57	-1.69E-46
MS.gene049711	MS.gene98735	0.829352	5.40E-55	-1.69E-46
MS.gene050901	MS.gene98735	0.808863	2.51E-50	-1.69E-46
MS.gene051018	MS.gene98735	0.808163	3.54E-50	-1.69E-46
MS.gene051719	MS.gene98735	0.838333	3.06E-57	-1.69E-46
MS.gene051720	MS.gene98735	0.832993	6.88E-56	-1.69E-46
MS.gene052000	MS.gene98735	0.926789	2.89E-91	-1.69E-46
MS.gene052516	MS.gene98735	0.819265	1.27E-52	-1.69E-46
MS.gene053144	MS.gene98735	0.819455	1.15E-52	-1.69E-46
MS.gene054584	MS.gene98735	0.811692	6.16E-51	-1.69E-46
MS.gene054651	MS.gene98735	0.80542	1.35E-49	-1.69E-46
MS.gene055083	MS.gene98735	0.810265	1.26E-50	-1.69E-46
MS.gene055465	MS.gene98735	0.83346	5.27E-56	-1.69E-46
MS.gene055466	MS.gene98735	0.821244	4.48E-53	-1.69E-46
MS.gene055468	MS.gene98735	0.802355	5.84E-49	-1.69E-46
MS.gene055469	MS.gene98735	0.806585	7.66E-50	-1.69E-46
MS.gene055537	MS.gene98735	0.82277	1.98E-53	-1.69E-46
MS.gene056005	MS.gene98735	0.81343	2.57E-51	-1.69E-46
MS.gene056308	MS.gene98735	0.834505	2.88E-56	-1.69E-46
MS.gene056507	MS.gene98735	0.801796	7.60E-49	-1.69E-46
MS.gene05894	MS.gene98735	0.833452	5.29E-56	-1.69E-46
MS.gene060519	MS.gene98735	0.820987	5.13E-53	-1.69E-46
MS.gene060587	MS.gene98735	0.801871	7.34E-49	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene98735.t1	MTR_2g099110	97.072	444	13	0	1	444	9	452	0.0	904
MS.gene98735.t1	MTR_5g015490	54.774	398	153	7	60	444	108	491	2.99e-148	431
MS.gene98735.t1	MTR_4g097080	55.499	391	151	8	62	444	129	504	1.05e-146	427
MS.gene98735.t1	MTR_2g089100	28.169	426	250	9	54	444	40	444	2.03e-51	180
MS.gene98735.t1	MTR_1g029420	29.306	389	245	8	65	443	224	592	9.25e-51	181
MS.gene98735.t1	MTR_4g095500	30.374	428	234	12	65	444	58	469	1.91e-47	169
MS.gene98735.t1	MTR_2g082090	29.381	388	244	8	65	442	211	578	4.83e-46	168
MS.gene98735.t1	MTR_3g089055	28.021	389	250	8	65	443	202	570	1.48e-45	166
MS.gene98735.t1	MTR_3g089055	28.021	389	250	8	65	443	197	565	1.51e-45	166
MS.gene98735.t1	MTR_5g094450	28.608	395	244	10	65	443	160	532	1.46e-42	157
MS.gene98735.t1	MTR_5g097480	28.462	390	245	9	66	443	177	544	4.31e-42	156
MS.gene98735.t1	MTR_5g015950	27.021	433	244	11	65	444	34	447	1.00e-41	154
MS.gene98735.t1	MTR_3g053270	27.021	433	244	11	65	444	34	447	1.00e-41	154
MS.gene98735.t1	MTR_3g056110	26.478	389	256	8	65	443	174	542	4.27e-39	148
MS.gene98735.t1	MTR_4g133660	28.316	392	244	11	65	442	174	542	1.94e-38	146
MS.gene98735.t1	MTR_8g020840	27.317	410	250	13	58	443	163	548	9.94e-38	144
MS.gene98735.t1	MTR_7g074650	28.125	384	237	12	69	444	441	793	2.48e-37	145
MS.gene98735.t1	MTR_8g442410	28.462	390	246	10	67	443	156	525	3.12e-37	143
MS.gene98735.t1	MTR_7g027190	25.616	406	263	10	56	443	289	673	6.09e-34	135
MS.gene98735.t1	MTR_2g026250	26.804	388	253	10	67	443	229	596	6.99e-34	134
MS.gene98735.t1	MTR_3g065980	27.342	395	242	9	67	443	173	540	2.86e-33	132
MS.gene98735.t1	MTR_4g077760	28.753	393	237	11	65	443	192	555	4.09e-33	131
MS.gene98735.t1	MTR_4g102790	24.422	389	267	8	66	444	292	663	1.13e-32	131
MS.gene98735.t1	MTR_2g097310	27.481	393	246	11	66	444	272	639	8.36e-32	128
MS.gene98735.t1	MTR_4g064200	27.041	392	253	11	64	444	282	651	1.14e-31	128
MS.gene98735.t1	MTR_3g072710	27.251	411	252	15	57	442	111	499	3.90e-31	125
MS.gene98735.t1	MTR_2g097350	28.827	392	242	13	66	444	274	641	4.12e-31	126
MS.gene98735.t1	MTR_1g069725	26.316	437	276	16	14	442	64	462	2.64e-30	122
MS.gene98735.t1	MTR_4g076020	26.786	392	223	17	69	444	87	430	6.10e-30	121
MS.gene98735.t1	MTR_7g062120	25.943	424	278	11	36	444	339	741	1.86e-29	122
MS.gene98735.t1	MTR_4g104020	25.616	406	254	12	59	443	142	520	2.74e-28	117
MS.gene98735.t1	MTR_4g064120	25.195	385	257	10	42	409	226	596	9.12e-28	116
MS.gene98735.t1	MTR_2g097463	27.095	358	227	10	64	408	288	624	1.11e-27	116
MS.gene98735.t1	MTR_5g058860	28.438	429	258	18	39	442	92	496	1.44e-27	115
MS.gene98735.t1	MTR_2g097467	25.140	358	234	8	64	408	287	623	1.63e-27	115
MS.gene98735.t1	MTR_4g064160	24.422	389	265	8	66	444	316	685	3.41e-27	115
MS.gene98735.t1	MTR_2g097410	25.062	403	267	10	56	444	361	742	4.15e-27	114
MS.gene98735.t1	MTR_4g064150	25.320	391	263	12	66	444	361	734	1.19e-26	113
MS.gene98735.t1	MTR_4g064180	25.549	364	235	11	42	387	226	571	2.45e-26	112
MS.gene98735.t1	MTR_2g097390	26.410	390	254	10	66	444	275	642	2.53e-26	112
MS.gene98735.t1	MTR_2g097473	24.760	416	271	12	2	407	239	622	1.03e-25	110
MS.gene98735.t1	MTR_2g034250	24.557	395	260	12	67	443	211	585	3.44e-23	102
MS.gene98735.t1	MTR_2g034260	23.291	395	264	13	67	443	211	584	6.88e-23	101
MS.gene98735.t1	MTR_1g096030	25.980	408	262	14	57	443	71	459	1.72e-22	99.8
MS.gene98735.t1	MTR_2g034280	26.298	289	196	8	67	343	204	487	7.37e-22	98.6
MS.gene98735.t1	MTR_4g076140	31.481	216	136	5	57	270	39	244	8.55e-22	97.8
MS.gene98735.t1	MTR_5g009080	26.754	228	157	4	57	283	47	265	3.37e-21	96.3
MS.gene98735.t1	MTR_3g022830	22.247	445	264	10	57	443	16	436	5.35e-20	92.4
MS.gene98735.t1	MTR_2g097380	25.625	320	199	8	73	384	231	519	1.23e-19	91.7
MS.gene98735.t1	MTR_7g057230	25.837	418	256	13	45	442	273	656	1.92e-18	88.6
MS.gene98735.t1	MTR_0092s0100	23.316	386	257	9	67	443	373	728	1.27e-17	85.9
MS.gene98735.t1	MTR_0092s0100	23.316	386	257	9	67	443	376	731	1.33e-17	85.9
MS.gene98735.t1	MTR_6g047750	24.378	402	252	13	63	443	292	662	2.30e-16	82.0
MS.gene98735.t1	MTR_8g093070	25.634	355	218	15	102	444	177	497	1.02e-15	79.7
MS.gene98735.t1	MTR_4g026485	21.763	363	254	8	85	443	288	624	5.02e-15	77.8
MS.gene98735.t1	MTR_1g086970	21.644	365	260	10	88	443	131	478	6.63e-15	77.0
MS.gene98735.t1	MTR_8g077940	23.828	256	176	8	85	331	201	446	5.86e-12	68.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene98735.t1	AT4G37650	51.111	405	166	9	59	444	139	530	4.25e-141	414
MS.gene98735.t1	AT3G49950	30.976	410	236	12	59	444	23	409	1.68e-56	192
MS.gene98735.t1	AT5G48150	28.900	391	241	9	67	443	123	490	3.82e-47	169
MS.gene98735.t1	AT5G48150	28.900	391	241	9	67	443	123	490	3.82e-47	169
MS.gene98735.t1	AT5G48150	28.900	391	241	9	67	443	123	490	3.82e-47	169
MS.gene98735.t1	AT5G48150	28.900	391	241	9	67	443	123	490	3.82e-47	169
MS.gene98735.t1	AT2G04890	28.756	386	242	9	66	443	53	413	3.96e-47	167
MS.gene98735.t1	AT1G50600	29.381	388	244	9	66	443	159	526	1.53e-44	163
MS.gene98735.t1	AT1G50600	29.381	388	244	9	66	443	230	597	3.77e-44	163
MS.gene98735.t1	AT1G50600	29.381	388	244	9	66	443	234	601	3.99e-44	163
MS.gene98735.t1	AT1G21450	27.962	422	266	12	37	443	195	593	2.33e-42	158
MS.gene98735.t1	AT3G13840	29.953	424	244	13	40	443	120	510	3.41e-42	156
MS.gene98735.t1	AT3G54220	29.925	401	237	15	56	444	283	651	2.86e-38	147
MS.gene98735.t1	AT3G03450	27.225	382	253	9	67	443	184	545	1.31e-37	144
MS.gene98735.t1	AT4G17230	27.551	392	250	10	65	444	157	526	8.59e-37	141
MS.gene98735.t1	AT4G17230	27.551	392	250	10	65	444	157	526	8.59e-37	141
MS.gene98735.t1	AT5G17490	26.551	403	267	9	45	443	139	516	1.48e-36	141
MS.gene98735.t1	AT1G14920	27.506	389	238	10	67	443	173	529	1.16e-34	135
MS.gene98735.t1	AT3G46600	28.718	390	246	10	66	444	4	372	3.98e-34	131
MS.gene98735.t1	AT1G66350	27.487	382	241	11	67	443	156	506	4.36e-34	134
MS.gene98735.t1	AT3G46600	28.718	390	246	10	66	444	212	580	3.16e-33	132
MS.gene98735.t1	AT3G46600	28.718	390	246	10	66	444	180	548	3.58e-33	132
MS.gene98735.t1	AT2G01570	26.753	385	246	9	67	443	225	581	4.87e-33	131
MS.gene98735.t1	AT5G59450	28.061	392	250	10	66	444	227	599	1.29e-32	130
MS.gene98735.t1	AT5G41920	27.990	418	252	16	46	443	12	400	2.60e-31	124
MS.gene98735.t1	AT1G63100	24.619	394	263	9	66	442	277	653	5.61e-29	120
MS.gene98735.t1	AT1G63100	24.619	394	263	9	66	442	252	628	7.34e-29	119
MS.gene98735.t1	AT1G07530	24.485	437	293	12	23	444	352	766	8.94e-29	120
MS.gene98735.t1	AT2G29065	25.127	394	264	10	66	444	252	629	2.27e-28	118
MS.gene98735.t1	AT5G66770	27.273	418	261	14	43	443	193	584	4.52e-28	117
MS.gene98735.t1	AT4G08250	27.907	387	232	14	75	442	118	476	6.10e-28	116
MS.gene98735.t1	AT2G29060	26.343	391	258	9	66	444	284	656	9.01e-28	116
MS.gene98735.t1	AT2G29060	26.343	391	258	9	66	444	321	693	9.67e-28	116
MS.gene98735.t1	AT1G07520	26.276	392	261	10	66	444	319	695	1.51e-26	113
MS.gene98735.t1	AT2G37650	25.831	391	255	12	66	444	335	702	1.75e-26	113
MS.gene98735.t1	AT1G55580	27.301	326	208	9	132	443	135	445	1.94e-26	111
MS.gene98735.t1	AT2G37650	25.831	391	255	12	66	444	347	714	2.06e-26	112
MS.gene98735.t1	AT1G07520	26.276	392	261	10	66	444	318	694	2.07e-26	112
MS.gene98735.t1	AT1G07520	26.276	392	261	10	66	444	154	530	2.27e-26	112
MS.gene98735.t1	AT1G07520	26.276	392	261	10	66	444	154	530	2.27e-26	112
MS.gene98735.t1	AT3G50650	26.944	360	227	11	97	443	206	542	2.33e-24	106
MS.gene98735.t1	AT1G50420	29.268	246	163	4	30	270	16	255	7.27e-24	104
MS.gene98735.t1	AT5G52510	23.775	408	252	11	63	443	265	640	3.48e-20	94.0
MS.gene98735.t1	AT4G00150	26.766	269	163	9	71	329	212	456	8.45e-13	70.9
MS.gene98735.t1	AT3G60630	24.920	313	197	12	146	443	333	622	4.01e-12	68.6

Find 64 sgRNAs with CRISPR-Local

Find 72 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CAAGGAGATGATCATATTTC+AGG	0.247824	2.1:+5365027	MS.gene98735:CDS
AGTGTTCAAGAAGCATAATT+AGG	0.262613	2.1:+5364806	MS.gene98735:CDS
AAGAAGCATAATTAGGGTTT+TGG	0.264830	2.1:+5364813	MS.gene98735:CDS
AACGAGTTATCTTCACCTTA+TGG	0.280967	2.1:+5364040	MS.gene98735:CDS
GGAGAAATTTGCTAGGCTTA+TGG	0.293692	2.1:+5364453	MS.gene98735:CDS
GAGAAATTTGCTAGGCTTAT+GGG	0.296804	2.1:+5364454	MS.gene98735:CDS
GTAAGTCCATGGACAACTTT+TGG	0.310503	2.1:+5364217	MS.gene98735:CDS
ACACTCTTTGAGAAGTTTGT+AGG	0.324051	2.1:-5363960	None:intergenic
GAAGGAGGAGCCAGTTGTTT+GGG	0.360276	2.1:+5365065	MS.gene98735:CDS
GGAAGGAGGAGCCAGTTGTT+TGG	0.371169	2.1:+5365064	MS.gene98735:CDS
GCCTACTCTTCTAGAAGCTT+TGG	0.372153	2.1:+5364333	MS.gene98735:CDS
ATTAACCTCTCATTACTTGT+TGG	0.376305	2.1:-5364772	None:intergenic
CATGTTGATGCCCAAACAAC+TGG	0.384320	2.1:-5365075	None:intergenic
GTGTTCAAGAAGCATAATTA+GGG	0.390341	2.1:+5364807	MS.gene98735:CDS
ATCGTGATCAAGATGGTAAA+TGG	0.422295	2.1:+5363936	MS.gene98735:CDS
TGACAACAATTGTGAGCTTA+AGG	0.423250	2.1:-5364381	None:intergenic
GTATTCTTTGAAGTATTGTA+AGG	0.423643	2.1:-5363785	None:intergenic
TTCTAGTGTTGTTGTTATGA+AGG	0.438949	2.1:+5364414	MS.gene98735:CDS
CTAATAACGTTCAACTCAAA+AGG	0.439883	2.1:-5364481	None:intergenic
TGATGTATGCATCATGTCTA+TGG	0.450632	2.1:-5363867	None:intergenic
GCAATAGCTTTGAATTGTGT+TGG	0.455338	2.1:+5364562	MS.gene98735:CDS
ACGTCAAAGCGTTGCTAAAG+AGG	0.462927	2.1:+5364974	MS.gene98735:CDS
GCAACACACTTTGTACTCAA+TGG	0.478846	2.1:+5364311	MS.gene98735:CDS
GTTGTTGTTATGAAGGAAGT+TGG	0.482632	2.1:+5364421	MS.gene98735:CDS
AACAATGGTTTGAAAGGCTT+AGG	0.484650	2.1:+5364908	MS.gene98735:CDS
TTTGGACACGTAGCATCAAA+TGG	0.490444	2.1:+5364235	MS.gene98735:CDS
GAAGGAAGTTGGTCAAAGAA+TGG	0.494144	2.1:+5364432	MS.gene98735:CDS
TCAACAAATGTCACAACTCT+AGG	0.495147	2.1:-5364649	None:intergenic
GAGGAAAACAATGGTTTGAA+AGG	0.495452	2.1:+5364902	MS.gene98735:CDS
ATGAGAGGTTAATGTTGGAA+AGG	0.501619	2.1:+5364782	MS.gene98735:CDS
GTGACATTTGTTGAGGAAGA+AGG	0.504902	2.1:+5364658	MS.gene98735:CDS
TGGATTTAGTGATGATGTTG+TGG	0.508345	2.1:+5364948	MS.gene98735:CDS
GTGACCAGATTGTGTTGCCT+TGG	0.516301	2.1:-5364110	None:intergenic
TATTGTGATAAAAGAGAGAG+AGG	0.525178	2.1:+5364883	MS.gene98735:CDS
TGAGAGGTTAATGTTGGAAA+GGG	0.526258	2.1:+5364783	MS.gene98735:CDS
GAATTAACGAAAGAGAGATT+AGG	0.532150	2.1:+5364523	MS.gene98735:CDS
TGGTCACTTGTTGTGCCTCA+AGG	0.536151	2.1:+5365009	MS.gene98735:CDS
CGTTTAACATCCAAAGAAGA+TGG	0.546279	2.1:-5364021	None:intergenic
GAGAGATTAGGAATTCAAGA+AGG	0.556850	2.1:+5364535	MS.gene98735:CDS
AAGTAATGAGAGGTTAATGT+TGG	0.563161	2.1:+5364777	MS.gene98735:CDS
GTTAATACTCAAGTTTCAAG+AGG	0.563644	2.1:+5364195	MS.gene98735:CDS
AAAGAATGGAGAAATTTGCT+AGG	0.565724	2.1:+5364446	MS.gene98735:CDS
CAGTTGTTTGGGCATCAACA+TGG	0.572778	2.1:+5365076	MS.gene98735:CDS
TAGAGTTGTGACATTTGTTG+AGG	0.579320	2.1:+5364651	MS.gene98735:CDS
ACGTGTCCAAAAGTTGTCCA+TGG	0.583351	2.1:-5364223	None:intergenic
TTCTTGCTGAATCAAAAGAG+TGG	0.585703	2.1:-5364171	None:intergenic
TTCAACCAACAAGTAATGAG+AGG	0.588837	2.1:+5364767	MS.gene98735:CDS
TTTGATGATGATGAAGATGA+TGG	0.595058	2.1:+5364850	MS.gene98735:CDS
AAAGAGAGAGAGGAAAACAA+TGG	0.597298	2.1:+5364893	MS.gene98735:CDS
TTTCAGGAATGTACCTCACA+TGG	0.601917	2.1:+5365043	MS.gene98735:CDS
ACATGTCATCGTGATCAAGA+TGG	0.610985	2.1:+5363929	MS.gene98735:CDS
TTAACATCCAAAGAAGATGG+TGG	0.611767	2.1:-5364018	None:intergenic
AGTTTCAAGAGGTAAGTCCA+TGG	0.613365	2.1:+5364206	MS.gene98735:CDS
GCCAAAGCTTCTAGAAGAGT+AGG	0.613903	2.1:-5364334	None:intergenic
TAAAGAGGTATCAAGCTGGT+TGG	0.616512	2.1:+5364989	MS.gene98735:CDS
AGGAATGTACCTCACATGGA+AGG	0.622436	2.1:+5365047	MS.gene98735:CDS
CTGGCTCCTCCTTCCATGTG+AGG	0.635263	2.1:-5365056	None:intergenic
TTGCTAAAGAGGTATCAAGC+TGG	0.647082	2.1:+5364985	MS.gene98735:CDS
AATGTACCTCACATGGAAGG+AGG	0.650550	2.1:+5365050	MS.gene98735:CDS
GAAATATGATCATCTCCTTG+AGG	0.654963	2.1:-5365024	None:intergenic
GATGATGAAGATGATGGTGG+TGG	0.659497	2.1:+5364856	MS.gene98735:CDS
GATGATGATGAAGATGATGG+TGG	0.660969	2.1:+5364853	MS.gene98735:CDS
ACAATTGTGAGCTTAAGGTG+AGG	0.710121	2.1:-5364376	None:intergenic
ACATCATCACTAAATCCACA+AGG	0.718156	2.1:-5364943	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AATTTATTTTGAGATGTTAG+AGG	+	chr2.1:5364738-5364757	MS.gene98735:CDS	20.0%
!!!	GAAAATAGCTATTATTTTGA+TGG	-	chr2.1:5363832-5363851	None:intergenic	20.0%
!!	TTTTGATCAATATCTCCATA+AGG	-	chr2.1:5364058-5364077	None:intergenic	25.0%
!!!	GTATTCTTTGAAGTATTGTA+AGG	-	chr2.1:5363788-5363807	None:intergenic	25.0%
	AAGTAATGAGAGGTTAATGT+TGG	+	chr2.1:5364777-5364796	MS.gene98735:CDS	30.0%
	ATTAACCTCTCATTACTTGT+TGG	-	chr2.1:5364775-5364794	None:intergenic	30.0%
	CTAATAACGTTCAACTCAAA+AGG	-	chr2.1:5364484-5364503	None:intergenic	30.0%
	GAATTAACGAAAGAGAGATT+AGG	+	chr2.1:5364523-5364542	MS.gene98735:CDS	30.0%
	GTTAATACTCAAGTTTCAAG+AGG	+	chr2.1:5364195-5364214	MS.gene98735:CDS	30.0%
	TATTGTGATAAAAGAGAGAG+AGG	+	chr2.1:5364883-5364902	MS.gene98735:CDS	30.0%
!	AAAGAATGGAGAAATTTGCT+AGG	+	chr2.1:5364446-5364465	MS.gene98735:CDS	30.0%
!	AGTGTTCAAGAAGCATAATT+AGG	+	chr2.1:5364806-5364825	MS.gene98735:CDS	30.0%
!	GTGTTCAAGAAGCATAATTA+GGG	+	chr2.1:5364807-5364826	MS.gene98735:CDS	30.0%
!	TTCTAGTGTTGTTGTTATGA+AGG	+	chr2.1:5364414-5364433	MS.gene98735:CDS	30.0%
!!	AAGAAGCATAATTAGGGTTT+TGG	+	chr2.1:5364813-5364832	MS.gene98735:CDS	30.0%
!!	TTTGATGATGATGAAGATGA+TGG	+	chr2.1:5364850-5364869	MS.gene98735:CDS	30.0%
!!!	GCTATTTTAGAAGCTTTAGA+AGG	+	chr2.1:5364259-5364278	MS.gene98735:CDS	30.0%
	AAAGAGAGAGAGGAAAACAA+TGG	+	chr2.1:5364893-5364912	MS.gene98735:CDS	35.0%
	AACAATGGTTTGAAAGGCTT+AGG	+	chr2.1:5364908-5364927	MS.gene98735:CDS	35.0%
	AACGAGTTATCTTCACCTTA+TGG	+	chr2.1:5364040-5364059	MS.gene98735:CDS	35.0%
	ACATCATCACTAAATCCACA+AGG	-	chr2.1:5364946-5364965	None:intergenic	35.0%
	ATCGTGATCAAGATGGTAAA+TGG	+	chr2.1:5363936-5363955	MS.gene98735:CDS	35.0%
	ATGAGAGGTTAATGTTGGAA+AGG	+	chr2.1:5364782-5364801	MS.gene98735:CDS	35.0%
	CAAAAATCCACCATCTTCTT+TGG	+	chr2.1:5364011-5364030	MS.gene98735:CDS	35.0%
	CAAGGAGATGATCATATTTC+AGG	+	chr2.1:5365027-5365046	MS.gene98735:CDS	35.0%
	CGTTTAACATCCAAAGAAGA+TGG	-	chr2.1:5364024-5364043	None:intergenic	35.0%
	GAAATATGATCATCTCCTTG+AGG	-	chr2.1:5365027-5365046	None:intergenic	35.0%
	GAGAGATTAGGAATTCAAGA+AGG	+	chr2.1:5364535-5364554	MS.gene98735:CDS	35.0%
	GAGGAAAACAATGGTTTGAA+AGG	+	chr2.1:5364902-5364921	MS.gene98735:CDS	35.0%
	TCAACAAATGTCACAACTCT+AGG	-	chr2.1:5364652-5364671	None:intergenic	35.0%
	TGACAACAATTGTGAGCTTA+AGG	-	chr2.1:5364384-5364403	None:intergenic	35.0%
	TGAGAGGTTAATGTTGGAAA+GGG	+	chr2.1:5364783-5364802	MS.gene98735:CDS	35.0%
	TGATGTATGCATCATGTCTA+TGG	-	chr2.1:5363870-5363889	None:intergenic	35.0%
	TTAACATCCAAAGAAGATGG+TGG	-	chr2.1:5364021-5364040	None:intergenic	35.0%
	TTCAACCAACAAGTAATGAG+AGG	+	chr2.1:5364767-5364786	MS.gene98735:CDS	35.0%
	TTCTTGCTGAATCAAAAGAG+TGG	-	chr2.1:5364174-5364193	None:intergenic	35.0%
!	ACACTCTTTGAGAAGTTTGT+AGG	-	chr2.1:5363963-5363982	None:intergenic	35.0%
!	AGGAATGAATTTTCACCTTG+TGG	+	chr2.1:5364928-5364947	MS.gene98735:CDS	35.0%
!	GTTGTTGTTATGAAGGAAGT+TGG	+	chr2.1:5364421-5364440	MS.gene98735:CDS	35.0%
!	TAGAGTTGTGACATTTGTTG+AGG	+	chr2.1:5364651-5364670	MS.gene98735:CDS	35.0%
!	TCTACAAGCTCTATTTTCCA+AGG	+	chr2.1:5364093-5364112	MS.gene98735:CDS	35.0%
!	TGGATTTAGTGATGATGTTG+TGG	+	chr2.1:5364948-5364967	MS.gene98735:CDS	35.0%
!!	GAGAAATTTGCTAGGCTTAT+GGG	+	chr2.1:5364454-5364473	MS.gene98735:CDS	35.0%
!!	GCAATAGCTTTGAATTGTGT+TGG	+	chr2.1:5364562-5364581	MS.gene98735:CDS	35.0%
	ACAATTGTGAGCTTAAGGTG+AGG	-	chr2.1:5364379-5364398	None:intergenic	40.0%
	ACATGTCATCGTGATCAAGA+TGG	+	chr2.1:5363929-5363948	MS.gene98735:CDS	40.0%
	AGTTTCAAGAGGTAAGTCCA+TGG	+	chr2.1:5364206-5364225	MS.gene98735:CDS	40.0%
	GCAACACACTTTGTACTCAA+TGG	+	chr2.1:5364311-5364330	MS.gene98735:CDS	40.0%
	TTTCAGGAATGTACCTCACA+TGG	+	chr2.1:5365043-5365062	MS.gene98735:CDS	40.0%
	TTTGGACACGTAGCATCAAA+TGG	+	chr2.1:5364235-5364254	MS.gene98735:CDS	40.0%
!	GAAGGAAGTTGGTCAAAGAA+TGG	+	chr2.1:5364432-5364451	MS.gene98735:CDS	40.0%
!	GATGATGATGAAGATGATGG+TGG	+	chr2.1:5364853-5364872	MS.gene98735:CDS	40.0%
!	GTAAGTCCATGGACAACTTT+TGG	+	chr2.1:5364217-5364236	MS.gene98735:CDS	40.0%
!	GTGACATTTGTTGAGGAAGA+AGG	+	chr2.1:5364658-5364677	MS.gene98735:CDS	40.0%
!	TTTTCCAAGGCAACACAATC+TGG	+	chr2.1:5364106-5364125	MS.gene98735:CDS	40.0%
!!	GGAGAAATTTGCTAGGCTTA+TGG	+	chr2.1:5364453-5364472	MS.gene98735:CDS	40.0%
!!	TAAAGAGGTATCAAGCTGGT+TGG	+	chr2.1:5364989-5365008	MS.gene98735:CDS	40.0%
!!	TTGCTAAAGAGGTATCAAGC+TGG	+	chr2.1:5364985-5365004	MS.gene98735:CDS	40.0%
	AATGTACCTCACATGGAAGG+AGG	+	chr2.1:5365050-5365069	MS.gene98735:CDS	45.0%
	ACGTGTCCAAAAGTTGTCCA+TGG	-	chr2.1:5364226-5364245	None:intergenic	45.0%
	AGGAATGTACCTCACATGGA+AGG	+	chr2.1:5365047-5365066	MS.gene98735:CDS	45.0%
	CAGTTGTTTGGGCATCAACA+TGG	+	chr2.1:5365076-5365095	MS.gene98735:CDS	45.0%
	CATGTTGATGCCCAAACAAC+TGG	-	chr2.1:5365078-5365097	None:intergenic	45.0%
!	GCCAAAGCTTCTAGAAGAGT+AGG	-	chr2.1:5364337-5364356	None:intergenic	45.0%
!	GCCTACTCTTCTAGAAGCTT+TGG	+	chr2.1:5364333-5364352	MS.gene98735:CDS	45.0%
!!	ACGTCAAAGCGTTGCTAAAG+AGG	+	chr2.1:5364974-5364993	MS.gene98735:CDS	45.0%
!!	GATGATGAAGATGATGGTGG+TGG	+	chr2.1:5364856-5364875	MS.gene98735:CDS	45.0%
	GAAGGAGGAGCCAGTTGTTT+GGG	+	chr2.1:5365065-5365084	MS.gene98735:CDS	50.0%
	GTGACCAGATTGTGTTGCCT+TGG	-	chr2.1:5364113-5364132	None:intergenic	50.0%
!!	TGGTCACTTGTTGTGCCTCA+AGG	+	chr2.1:5365009-5365028	MS.gene98735:CDS	50.0%
	GGAAGGAGGAGCCAGTTGTT+TGG	+	chr2.1:5365064-5365083	MS.gene98735:CDS	55.0%
	CTGGCTCCTCCTTCCATGTG+AGG	-	chr2.1:5365059-5365078	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr2.1	gene	5363773	5365107	5363773	ID=MS.gene98735
chr2.1	mRNA	5363773	5365107	5363773	ID=MS.gene98735.t1;Parent=MS.gene98735
chr2.1	exon	5363773	5365107	5363773	ID=MS.gene98735.t1.exon1;Parent=MS.gene98735.t1
chr2.1	CDS	5363773	5365107	5363773	ID=cds.MS.gene98735.t1;Parent=MS.gene98735.t1

Gene Sequence

>MS.gene98735

ATGGAGATAAGTCCTTACAATACTTCAAAGAATACAACGCACTTGAAGAAGTTGAACCATCAAAATAATAGCTATTTTCTTCATGAAGCTTCAACCATAGACATGATGCATACATCATCAAGCAATCATCAAACATCTTCAGATAATTCTAGTGAGACATGTCATCGTGATCAAGATGGTAAATGGTCCTACAAACTTCTCAAAGAGTGTGCAATTGCAATATCTAATAGAGACTCATCAAAAATCCACCATCTTCTTTGGATGTTAAACGAGTTATCTTCACCTTATGGAGATATTGATCAAAAACTAGCTTCATATTTTCTACAAGCTCTATTTTCCAAGGCAACACAATCTGGTCACAAGTGTTACAAAACACTATCTTCAATCGCTTACAAAAACCACTCTTTTGATTCAGCAAGAAAGTTAATACTCAAGTTTCAAGAGGTAAGTCCATGGACAACTTTTGGACACGTAGCATCAAATGGTGCTATTTTAGAAGCTTTAGAAGGAGAGAAAAAACTTCATATAATTGATATTAGCAACACACTTTGTACTCAATGGCCTACTCTTCTAGAAGCTTTGGCAACAAGAAATGATGAAACTCCTCACCTTAAGCTCACAATTGTTGTCACAAATAATAGTTCTAGTGTTGTTGTTATGAAGGAAGTTGGTCAAAGAATGGAGAAATTTGCTAGGCTTATGGGAGTACCTTTTGAGTTGAACGTTATTAGTGATTTGAAACATATACGAGAATTAACGAAAGAGAGATTAGGAATTCAAGAAGGTGAAGCAATAGCTTTGAATTGTGTTGGAGCATTGAGAAAAGTTGAAGTTGAAGAAAGAGAAAGTGTGATTCAATTTTTCAAATCACTTAGTCCTAGAGTTGTGACATTTGTTGAGGAAGAAGGTGATTTTTGTAGTGATGACTTTGTTAAATGTTTTGAAGAGTGTCTTAAGTTTTATAGAATTTATTTTGAGATGTTAGAGGAGAGTTTTCAACCAACAAGTAATGAGAGGTTAATGTTGGAAAGGGAGTGTTCAAGAAGCATAATTAGGGTTTTGGCTTGTGATCATGAATTTGATGATGATGAAGATGATGGTGGTGGTGATTATTGTGATAAAAGAGAGAGAGGAAAACAATGGTTTGAAAGGCTTAGGAATGAATTTTCACCTTGTGGATTTAGTGATGATGTTGTGGATGACGTCAAAGCGTTGCTAAAGAGGTATCAAGCTGGTTGGTCACTTGTTGTGCCTCAAGGAGATGATCATATTTCAGGAATGTACCTCACATGGAAGGAGGAGCCAGTTGTTTGGGCATCAACATGGAAACCCTAG

Protein sequence

>MS.gene98735.t1

MEISPYNTSKNTTHLKKLNHQNNSYFLHEASTIDMMHTSSSNHQTSSDNSSETCHRDQDGKWSYKLLKECAIAISNRDSSKIHHLLWMLNELSSPYGDIDQKLASYFLQALFSKATQSGHKCYKTLSSIAYKNHSFDSARKLILKFQEVSPWTTFGHVASNGAILEALEGEKKLHIIDISNTLCTQWPTLLEALATRNDETPHLKLTIVVTNNSSSVVVMKEVGQRMEKFARLMGVPFELNVISDLKHIRELTKERLGIQEGEAIALNCVGALRKVEVEERESVIQFFKSLSPRVVTFVEEEGDFCSDDFVKCFEECLKFYRIYFEMLEESFQPTSNERLMLERECSRSIIRVLACDHEFDDDEDDGGGDYCDKRERGKQWFERLRNEFSPCGFSDDVVDDVKALLKRYQAGWSLVVPQGDDHISGMYLTWKEEPVVWASTWKP