Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99991.t1 | XP_024641064.1 | 89.2 | 343 | 12 | 2 | 1 | 318 | 1 | 343 | 1.50E-171 | 612.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99991.t1 | Q54P70 | 27.8 | 198 | 89 | 5 | 165 | 316 | 575 | 764 | 1.5e-07 | 58.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99991.t1 | G7I502 | 89.2 | 343 | 12 | 2 | 1 | 318 | 1 | 343 | 1.1e-171 | 612.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene99991 | 0.802572 | 5.26E-49 | -1.69E-46 |
| MS.gene050105 | MS.gene99991 | 0.819098 | 1.39E-52 | -1.69E-46 |
| MS.gene050605 | MS.gene99991 | 0.802881 | 4.55E-49 | -1.69E-46 |
| MS.gene052012 | MS.gene99991 | 0.822457 | 2.34E-53 | -1.69E-46 |
| MS.gene053008 | MS.gene99991 | 0.807117 | 5.91E-50 | -1.69E-46 |
| MS.gene053226 | MS.gene99991 | 0.804153 | 2.48E-49 | -1.69E-46 |
| MS.gene055701 | MS.gene99991 | 0.824674 | 7.10E-54 | -1.69E-46 |
| MS.gene055818 | MS.gene99991 | 0.805932 | 1.05E-49 | -1.69E-46 |
| MS.gene056506 | MS.gene99991 | 0.819747 | 9.88E-53 | -1.69E-46 |
| MS.gene058979 | MS.gene99991 | 0.806726 | 7.15E-50 | -1.69E-46 |
| MS.gene060803 | MS.gene99991 | 0.816479 | 5.41E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene99991 | MS.gene029809 | PPI |
| MS.gene99991 | MS.gene064483 | PPI |
| MS.gene99991 | MS.gene051473 | PPI |
| MS.gene055898 | MS.gene99991 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99991.t1 | MTR_1g094650 | 89.213 | 343 | 12 | 2 | 1 | 318 | 1 | 343 | 0.0 | 622 |
| MS.gene99991.t1 | MTR_1g063900 | 42.773 | 339 | 136 | 8 | 10 | 318 | 8 | 318 | 1.44e-75 | 235 |
| MS.gene99991.t1 | MTR_1g063900 | 41.948 | 267 | 122 | 6 | 10 | 271 | 8 | 246 | 9.89e-55 | 179 |
| MS.gene99991.t1 | MTR_6g033065 | 47.312 | 186 | 72 | 2 | 156 | 315 | 27 | 212 | 2.16e-53 | 175 |
| MS.gene99991.t1 | MTR_3g081150 | 45.562 | 169 | 67 | 2 | 175 | 318 | 47 | 215 | 1.10e-46 | 157 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99991.t1 | AT5G04250 | 46.064 | 343 | 142 | 6 | 4 | 318 | 2 | 329 | 3.05e-86 | 263 |
| MS.gene99991.t1 | AT5G04250 | 46.064 | 343 | 142 | 6 | 4 | 318 | 2 | 329 | 3.05e-86 | 263 |
| MS.gene99991.t1 | AT5G03330 | 44.948 | 287 | 122 | 6 | 54 | 315 | 60 | 335 | 9.70e-64 | 206 |
| MS.gene99991.t1 | AT5G03330 | 44.948 | 287 | 122 | 6 | 54 | 315 | 60 | 335 | 9.70e-64 | 206 |
| MS.gene99991.t1 | AT3G02070 | 49.180 | 183 | 68 | 1 | 158 | 315 | 19 | 201 | 1.52e-54 | 177 |
| MS.gene99991.t1 | AT3G02070 | 49.180 | 183 | 68 | 1 | 158 | 315 | 19 | 201 | 1.52e-54 | 177 |
| MS.gene99991.t1 | AT5G03330 | 42.238 | 277 | 124 | 6 | 54 | 305 | 60 | 325 | 1.50e-51 | 174 |
| MS.gene99991.t1 | AT5G03330 | 42.238 | 277 | 124 | 6 | 54 | 305 | 60 | 325 | 1.50e-51 | 174 |
| MS.gene99991.t1 | AT3G22260 | 43.333 | 180 | 75 | 3 | 166 | 318 | 47 | 226 | 1.62e-43 | 149 |
| MS.gene99991.t1 | AT3G22260 | 43.333 | 180 | 75 | 3 | 166 | 318 | 47 | 226 | 3.08e-43 | 149 |
| MS.gene99991.t1 | AT3G22260 | 43.333 | 180 | 75 | 3 | 166 | 318 | 47 | 226 | 3.08e-43 | 149 |
| MS.gene99991.t1 | AT3G22260 | 43.333 | 180 | 75 | 3 | 166 | 318 | 47 | 226 | 3.08e-43 | 149 |
| MS.gene99991.t1 | AT3G22260 | 43.333 | 180 | 75 | 3 | 166 | 318 | 47 | 226 | 3.08e-43 | 149 |
| MS.gene99991.t1 | AT3G22260 | 43.333 | 180 | 75 | 3 | 166 | 318 | 47 | 226 | 3.08e-43 | 149 |
| MS.gene99991.t1 | AT2G39320 | 34.821 | 112 | 48 | 3 | 223 | 318 | 2 | 104 | 6.03e-14 | 69.7 |
Find 77 sgRNAs with CRISPR-Local
Find 367 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGTAATATTTCTGAGCTTT+TGG | 0.231658 | 1.2:+73784851 | MS.gene99991:intron |
| CTTGATTCCATGGAATCTTC+TGG | 0.245382 | 1.2:+73779576 | MS.gene99991:CDS |
| GAGCATGAAGTTGGAGTATT+TGG | 0.256310 | 1.2:+73779865 | MS.gene99991:CDS |
| CATGATGACATCACATGATA+TGG | 0.308680 | 1.2:+73779359 | None:intergenic |
| ATAGTCAAGTTCAATATGTT+AGG | 0.312757 | 1.2:+73779478 | MS.gene99991:CDS |
| ATATGAACTGATTGAGTCTA+AGG | 0.313550 | 1.2:+73782300 | MS.gene99991:CDS |
| GAGTATTTGGTTCGTCTTCT+AGG | 0.317804 | 1.2:+73779878 | MS.gene99991:CDS |
| ATGACTCATCTACGGGATTC+TGG | 0.332360 | 1.2:-73779792 | None:intergenic |
| ATAAATTTGTTACCTCCTTC+CGG | 0.346210 | 1.2:-73784901 | None:intergenic |
| CGTACAAATTTGTGGAGGTT+TGG | 0.367169 | 1.2:-73783262 | None:intergenic |
| ACCTGTCTAGCAGCCTTTGA+TGG | 0.372482 | 1.2:-73780472 | None:intergenic |
| CTATGCTGGTTATGTTCCTA+TGG | 0.389215 | 1.2:+73783416 | MS.gene99991:CDS |
| GAAGTTACACTTACAGGAAT+AGG | 0.398508 | 1.2:-73780006 | None:intergenic |
| ATTTGTGATTACATCTTTCA+AGG | 0.399824 | 1.2:+73784525 | MS.gene99991:CDS |
| AATCCTCCGCTTCTTTCATA+TGG | 0.401116 | 1.2:-73779816 | None:intergenic |
| TGATGAAATGTGGCGTTCAT+TGG | 0.411463 | 1.2:+73779924 | MS.gene99991:CDS |
| TTGATTCCATGGAATCTTCT+GGG | 0.418354 | 1.2:+73779577 | MS.gene99991:CDS |
| ACATAACCAGCATAGAGATC+TGG | 0.421382 | 1.2:-73783408 | None:intergenic |
| ACCATCAAAGGCTGCTAGAC+AGG | 0.427425 | 1.2:+73780471 | MS.gene99991:CDS |
| TTTGGTTCGTCTTCTAGGTC+AGG | 0.429238 | 1.2:+73779883 | MS.gene99991:CDS |
| GTGGCGTTCATTGGAAATAT+CGG | 0.434139 | 1.2:+73779933 | MS.gene99991:CDS |
| GAAAATGATGAGCATGAAGT+TGG | 0.445523 | 1.2:+73779856 | MS.gene99991:CDS |
| TCGGACGAGTCTTCTCTTGA+TGG | 0.446395 | 1.2:+73779952 | MS.gene99991:CDS |
| ACGGGAACAAGTTGTTCAAC+AGG | 0.449520 | 1.2:+73783282 | MS.gene99991:CDS |
| TCAAACAGGAGCTATAACTT+TGG | 0.457569 | 1.2:+73779663 | MS.gene99991:CDS |
| GATCCCCTGGTGTCGTAACT+CGG | 0.467589 | 1.2:+73779442 | MS.gene99991:CDS |
| GGATCCTGACGTTGTTCGAT+GGG | 0.467870 | 1.2:+73779380 | MS.gene99991:CDS |
| GCATTACAACTCAATTTATC+CGG | 0.470926 | 1.2:+73784882 | MS.gene99991:CDS |
| ATTATCACATCTTGATTCCA+TGG | 0.475855 | 1.2:+73779566 | MS.gene99991:CDS |
| CTGATTGAGTCTAAGGTTGA+TGG | 0.477397 | 1.2:+73782307 | MS.gene99991:CDS |
| TGATCAAATCTCACTTCTTG+TGG | 0.477665 | 1.2:-73784587 | None:intergenic |
| CACATTTCATCAGTAATGAT+AGG | 0.479848 | 1.2:-73779913 | None:intergenic |
| ACTGGCTATCTTCTTCAAAC+AGG | 0.480173 | 1.2:+73779649 | MS.gene99991:CDS |
| TAGTCAAGTTCAATATGTTA+GGG | 0.494117 | 1.2:+73779479 | MS.gene99991:CDS |
| TAGCCAGTCCTGTGCATCTA+CGG | 0.494897 | 1.2:-73779634 | None:intergenic |
| TGGATCCTGACGTTGTTCGA+TGG | 0.500356 | 1.2:+73779379 | MS.gene99991:CDS |
| AGGCCCCATCGAACAACGTC+AGG | 0.501197 | 1.2:-73779384 | None:intergenic |
| CTTGTTCCCGTACAAATTTG+TGG | 0.501678 | 1.2:-73783270 | None:intergenic |
| CATATGGTATGACTCATCTA+CGG | 0.505093 | 1.2:-73779800 | None:intergenic |
| TCTTCTCTTGATGGTGAAGT+AGG | 0.505900 | 1.2:+73779961 | MS.gene99991:CDS |
| TTTCCACATGGTCGATCCCC+TGG | 0.508416 | 1.2:+73779429 | MS.gene99991:CDS |
| ATATGGTATGACTCATCTAC+GGG | 0.510485 | 1.2:-73779799 | None:intergenic |
| TTACAGGAATAGGAACCATC+TGG | 0.510872 | 1.2:-73779996 | None:intergenic |
| CATAACCAGCATAGAGATCT+GGG | 0.512866 | 1.2:-73783407 | None:intergenic |
| AGGATTGTGGTCCAAGTGAA+AGG | 0.513940 | 1.2:+73779833 | MS.gene99991:CDS |
| CAAACCTCCACAAATTTGTA+CGG | 0.514664 | 1.2:+73783263 | MS.gene99991:CDS |
| CATCCGTAGATGCACAGGAC+TGG | 0.527233 | 1.2:+73779631 | MS.gene99991:CDS |
| CATCCTCCCAGAAGATTCCA+TGG | 0.533488 | 1.2:-73779583 | None:intergenic |
| AAGAAGTATCAGACCATCAA+AGG | 0.544120 | 1.2:+73780459 | MS.gene99991:CDS |
| TCCGACCCAGATCTCTATGC+TGG | 0.548139 | 1.2:+73783402 | MS.gene99991:CDS |
| GATACTTCTTCGTTCTCAGA+TGG | 0.551344 | 1.2:-73780446 | None:intergenic |
| AAATATTCACTATAAACCAT+AGG | 0.553433 | 1.2:-73783432 | None:intergenic |
| GCGAGCATCCGTAGATGCAC+AGG | 0.562509 | 1.2:+73779626 | MS.gene99991:CDS |
| CAAGTTCAATATGTTAGGGA+AGG | 0.564597 | 1.2:+73779483 | MS.gene99991:CDS |
| ATGAAAGAAGCGGAGGATTG+TGG | 0.568765 | 1.2:+73779820 | MS.gene99991:CDS |
| TGATGGAGATGGTAACTGTC+AGG | 0.570584 | 1.2:+73782324 | MS.gene99991:CDS |
| TACAACTCAATTTATCCGGA+AGG | 0.580859 | 1.2:+73784886 | MS.gene99991:CDS |
| GGATTGTGGTCCAAGTGAAA+GGG | 0.581256 | 1.2:+73779834 | MS.gene99991:CDS |
| GAGTCTAAGGTTGATGGAGA+TGG | 0.583074 | 1.2:+73782313 | MS.gene99991:CDS |
| AAACCTCCACAAATTTGTAC+GGG | 0.584066 | 1.2:+73783264 | MS.gene99991:CDS |
| AGGCAAAAGATTAAACCAGA+TGG | 0.599929 | 1.2:+73779981 | MS.gene99991:CDS |
| TCACACCGAGTTACGACACC+AGG | 0.603061 | 1.2:-73779447 | None:intergenic |
| AACTCAATTTATCCGGAAGG+AGG | 0.611887 | 1.2:+73784889 | MS.gene99991:CDS |
| TGCAAACATCTAGAAGATGT+AGG | 0.621131 | 1.2:-73779404 | None:intergenic |
| CTTGTGGACTTCTGTATCTG+CGG | 0.625166 | 1.2:-73784571 | None:intergenic |
| GTCATACCATATGAAAGAAG+CGG | 0.641922 | 1.2:+73779810 | MS.gene99991:CDS |
| ACCAGCATAGAGATCTGGGT+CGG | 0.658906 | 1.2:-73783403 | None:intergenic |
| ATACCATATGAAAGAAGCGG+AGG | 0.659464 | 1.2:+73779813 | MS.gene99991:CDS |
| TTCAAATGTTGAACATGACG+AGG | 0.665749 | 1.2:+73779518 | MS.gene99991:CDS |
| GATGTTTGCACATTTCCACA+TGG | 0.675781 | 1.2:+73779417 | MS.gene99991:CDS |
| GTTCCCGTACAAATTTGTGG+AGG | 0.677176 | 1.2:-73783267 | None:intergenic |
| ACACCAGGGGATCGACCATG+TGG | 0.680011 | 1.2:-73779432 | None:intergenic |
| GATCCTGACGTTGTTCGATG+GGG | 0.691921 | 1.2:+73779381 | MS.gene99991:CDS |
| CTATCATTACTGATGAAATG+TGG | 0.702769 | 1.2:+73779914 | MS.gene99991:CDS |
| ATTCCATGGAATCTTCTGGG+AGG | 0.705324 | 1.2:+73779580 | MS.gene99991:CDS |
| CACACCGAGTTACGACACCA+GGG | 0.709258 | 1.2:-73779446 | None:intergenic |
| ACACCGAGTTACGACACCAG+GGG | 0.746885 | 1.2:-73779445 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAAAACCAAA+TGG | - | chr1.2:73780608-73780627 | None:intergenic | 10.0% |
| !! | AAAAAATATAATAAAAGCTT+CGG | + | chr1.2:73781448-73781467 | MS.gene99991:intron | 10.0% |
| !! | AAAAATTATTTGTCTTTAAA+TGG | + | chr1.2:73784266-73784285 | MS.gene99991:intron | 10.0% |
| !! | AAAACATTCATAAATTTATT+GGG | + | chr1.2:73782424-73782443 | MS.gene99991:intron | 10.0% |
| !! | ACTACTAATTAATAATTATT+TGG | - | chr1.2:73781554-73781573 | None:intergenic | 10.0% |
| !! | ATTAATTAAAATTGATGTAT+AGG | - | chr1.2:73783758-73783777 | None:intergenic | 10.0% |
| !! | TAAAACATTCATAAATTTAT+TGG | + | chr1.2:73782423-73782442 | MS.gene99991:intron | 10.0% |
| !! | TAAATTCTTTAATTATGTAA+AGG | + | chr1.2:73784343-73784362 | MS.gene99991:intron | 10.0% |
| !! | TAATAATTATTTGGTATAAT+AGG | - | chr1.2:73781545-73781564 | None:intergenic | 10.0% |
| !! | TGAAATAAATATTATAATAC+TGG | - | chr1.2:73782396-73782415 | None:intergenic | 10.0% |
| !! | TTATTAATTAGTAGTTATAT+TGG | + | chr1.2:73781559-73781578 | MS.gene99991:intron | 10.0% |
| !!! | AAGTTATTTATAAGTTATTT+TGG | + | chr1.2:73779706-73779725 | MS.gene99991:intron | 10.0% |
| !!! | ATCAATTTTAATTAATCAAA+TGG | + | chr1.2:73783762-73783781 | MS.gene99991:intron | 10.0% |
| !! | ATGAAAAAGATTTAATAAGA+TGG | + | chr1.2:73782124-73782143 | MS.gene99991:intron | 15.0% |
| !! | ATTGGTATTATAATCTTTAT+TGG | + | chr1.2:73784240-73784259 | MS.gene99991:intron | 15.0% |
| !! | GAAGCAAAAAAAAAAAAAAA+AGG | - | chr1.2:73780163-73780182 | None:intergenic | 15.0% |
| !! | GTAGAAAAAAATATAAAAAG+AGG | - | chr1.2:73782176-73782195 | None:intergenic | 15.0% |
| !! | TTAATTATGTAAAGGAATTA+AGG | + | chr1.2:73784351-73784370 | MS.gene99991:intron | 15.0% |
| !!! | AATTTATGAATGTTTTAACA+AGG | - | chr1.2:73782420-73782439 | None:intergenic | 15.0% |
| !!! | ATTATATTTTTTACGAAAAC+AGG | - | chr1.2:73781440-73781459 | None:intergenic | 15.0% |
| !!! | ATTTTATTTTTTATGTCTGT+TGG | + | chr1.2:73780503-73780522 | MS.gene99991:intron | 15.0% |
| !!! | ATTTTTTAGCATTATTAACT+TGG | + | chr1.2:73783126-73783145 | MS.gene99991:intron | 15.0% |
| !!! | CAAATTCATAATTTTCTTAA+AGG | - | chr1.2:73780713-73780732 | None:intergenic | 15.0% |
| !!! | GATTTCTATATATATTGTTT+TGG | - | chr1.2:73781929-73781948 | None:intergenic | 15.0% |
| !!! | TAATTGTTATTAGGAAAATT+GGG | - | chr1.2:73783994-73784013 | None:intergenic | 15.0% |
| !!! | TTAATTGTTATTAGGAAAAT+TGG | - | chr1.2:73783995-73784014 | None:intergenic | 15.0% |
| !!! | TTCTATCATAAACTAAATTT+TGG | - | chr1.2:73783857-73783876 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTTTTTTGCTTC+TGG | + | chr1.2:73780163-73780182 | MS.gene99991:intron | 15.0% |
| !! | AAAAAAAAAAACATGTTTGC+TGG | - | chr1.2:73781479-73781498 | None:intergenic | 20.0% |
| !! | AAAAAAAAAACATGTTTGCT+GGG | - | chr1.2:73781478-73781497 | None:intergenic | 20.0% |
| !! | AAAAAAAAGCAACAAAGAAA+AGG | + | chr1.2:73780905-73780924 | MS.gene99991:intron | 20.0% |
| !! | AAATATTCACTATAAACCAT+AGG | - | chr1.2:73783435-73783454 | None:intergenic | 20.0% |
| !! | AAGTTATTGAGAAACTAATT+TGG | - | chr1.2:73781190-73781209 | None:intergenic | 20.0% |
| !! | ATATCATAGGTTTAAATGAT+TGG | + | chr1.2:73784222-73784241 | MS.gene99991:intron | 20.0% |
| !! | ATTAAGAAACTAACTCATTA+AGG | - | chr1.2:73781217-73781236 | None:intergenic | 20.0% |
| !! | CACTCAAATTAAAATTTGAT+AGG | - | chr1.2:73784741-73784760 | None:intergenic | 20.0% |
| !! | GAATCAATACATATGATTAA+AGG | - | chr1.2:73783352-73783371 | None:intergenic | 20.0% |
| !! | GTATTTAATTAACTTCTTCT+AGG | - | chr1.2:73780541-73780560 | None:intergenic | 20.0% |
| !! | TCATAACATTTGTAGAAAAA+AGG | - | chr1.2:73782943-73782962 | None:intergenic | 20.0% |
| !! | TGTTATGAATCTTATGATAT+AGG | + | chr1.2:73782955-73782974 | MS.gene99991:intron | 20.0% |
| !! | TTAAACCATTTGAACTATTT+GGG | - | chr1.2:73784176-73784195 | None:intergenic | 20.0% |
| !! | TTTAAACCTATGATATATCA+AGG | - | chr1.2:73784218-73784237 | None:intergenic | 20.0% |
| !! | TTTAATCCTTGATATATCAT+AGG | + | chr1.2:73784209-73784228 | MS.gene99991:intron | 20.0% |
| !!! | AATTGTTATTAGGAAAATTG+GGG | - | chr1.2:73783993-73784012 | None:intergenic | 20.0% |
| !!! | ATCAAATTTTAATTTGAGTG+TGG | + | chr1.2:73784741-73784760 | MS.gene99991:intron | 20.0% |
| !!! | GTATGTTTTTGTTGATTTTA+GGG | - | chr1.2:73780427-73780446 | None:intergenic | 20.0% |
| !!! | GTATTATAGTTATTTTAGAG+AGG | + | chr1.2:73780739-73780758 | MS.gene99991:intron | 20.0% |
| !!! | TGGTCAACTTATATATTTTT+TGG | - | chr1.2:73782829-73782848 | None:intergenic | 20.0% |
| ! | AAAGAGATCATCTTATTAGT+TGG | - | chr1.2:73782001-73782020 | None:intergenic | 25.0% |
| ! | AAATGAAAACTGTACTAGAT+AGG | - | chr1.2:73781057-73781076 | None:intergenic | 25.0% |
| ! | AAGAGATCATCTTATTAGTT+GGG | - | chr1.2:73782000-73782019 | None:intergenic | 25.0% |
| ! | AATATTTAAAGAAGATGAGC+AGG | + | chr1.2:73783448-73783467 | MS.gene99991:intron | 25.0% |
| ! | ACAAAATATTGTCTGTTACA+AGG | - | chr1.2:73780633-73780652 | None:intergenic | 25.0% |
| ! | ACACCTAAAAACAACTATAT+TGG | - | chr1.2:73781671-73781690 | None:intergenic | 25.0% |
| ! | AGTACATGTAAATGTGAATA+TGG | + | chr1.2:73784650-73784669 | MS.gene99991:intron | 25.0% |
| ! | AGTTTATGATAGAACATCAT+TGG | + | chr1.2:73783863-73783882 | MS.gene99991:intron | 25.0% |
| ! | ATAAGTAAATATCATGTCAC+CGG | - | chr1.2:73784314-73784333 | None:intergenic | 25.0% |
| ! | ATAGTCAAGTTCAATATGTT+AGG | + | chr1.2:73779478-73779497 | MS.gene99991:CDS | 25.0% |
| ! | ATATTGGTGTATCACTATAT+TGG | - | chr1.2:73781655-73781674 | None:intergenic | 25.0% |
| ! | ATTTACTTGAATGACTGATA+TGG | + | chr1.2:73784468-73784487 | MS.gene99991:intron | 25.0% |
| ! | ATTTGTGATTACATCTTTCA+AGG | + | chr1.2:73784525-73784544 | MS.gene99991:CDS | 25.0% |
| ! | CTTAAACCATTTGAACTATT+TGG | - | chr1.2:73784177-73784196 | None:intergenic | 25.0% |
| ! | GTGATATATAATCAACATGT+AGG | + | chr1.2:73779757-73779776 | MS.gene99991:intron | 25.0% |
| ! | TAAAATTGATGTATAGGAGT+TGG | - | chr1.2:73783752-73783771 | None:intergenic | 25.0% |
| ! | TACGTATGAATTTCTGAATT+TGG | + | chr1.2:73781791-73781810 | MS.gene99991:intron | 25.0% |
| ! | TAGACCTTGAAAAACTATAA+GGG | + | chr1.2:73783793-73783812 | MS.gene99991:intron | 25.0% |
| ! | TAGTCAAGTTCAATATGTTA+GGG | + | chr1.2:73779479-73779498 | MS.gene99991:CDS | 25.0% |
| ! | TATGAATTTCTGAATTTGGT+AGG | + | chr1.2:73781795-73781814 | MS.gene99991:intron | 25.0% |
| ! | TATTGGTGTATCACTATATT+GGG | - | chr1.2:73781654-73781673 | None:intergenic | 25.0% |
| ! | TCTCAAAGAGAAGTTAAAAT+GGG | + | chr1.2:73780854-73780873 | MS.gene99991:intron | 25.0% |
| ! | TTAAAATAAACTCTGACACT+TGG | - | chr1.2:73783727-73783746 | None:intergenic | 25.0% |
| ! | TTAGACCTTGAAAAACTATA+AGG | + | chr1.2:73783792-73783811 | MS.gene99991:intron | 25.0% |
| ! | TTATCAGAAGTAAATCCTTT+GGG | + | chr1.2:73782889-73782908 | MS.gene99991:intron | 25.0% |
| ! | TTATGTTTCTTATGCCAATA+TGG | + | chr1.2:73783496-73783515 | MS.gene99991:intron | 25.0% |
| ! | TTCTCAAAGAGAAGTTAAAA+TGG | + | chr1.2:73780853-73780872 | MS.gene99991:intron | 25.0% |
| ! | TTTATCAGAAGTAAATCCTT+TGG | + | chr1.2:73782888-73782907 | MS.gene99991:intron | 25.0% |
| !! | AAAAAAAAACATGTTTGCTG+GGG | - | chr1.2:73781477-73781496 | None:intergenic | 25.0% |
| !! | AAATATATAAGTTGACCACA+TGG | + | chr1.2:73782831-73782850 | MS.gene99991:intron | 25.0% |
| !! | AATAATAAAGAGTGACTTGT+TGG | + | chr1.2:73783190-73783209 | MS.gene99991:intron | 25.0% |
| !! | ACTAATAAGATGATCTCTTT+TGG | + | chr1.2:73782001-73782020 | MS.gene99991:intron | 25.0% |
| !! | ATGTTATAACTTGTGAAAGT+AGG | + | chr1.2:73782467-73782486 | MS.gene99991:intron | 25.0% |
| !! | ATTTGGGACAATTAACTATT+TGG | - | chr1.2:73784160-73784179 | None:intergenic | 25.0% |
| !! | GAGTTAGTTTCTTAATTACT+TGG | + | chr1.2:73781221-73781240 | MS.gene99991:intron | 25.0% |
| !! | GCTTTATGTATGAATTTGTT+AGG | + | chr1.2:73783550-73783569 | MS.gene99991:intron | 25.0% |
| !! | TCATAATTTTCTTAAACGAG+AGG | - | chr1.2:73780708-73780727 | None:intergenic | 25.0% |
| !! | TCATAATTTTCTTAAAGGAG+AGG | - | chr1.2:73780796-73780815 | None:intergenic | 25.0% |
| !!! | AAGTTATTTTGGTATGTAAG+AGG | + | chr1.2:73779717-73779736 | MS.gene99991:intron | 25.0% |
| !!! | ACACCAATATAGTTGTTTTT+AGG | + | chr1.2:73781665-73781684 | MS.gene99991:intron | 25.0% |
| !!! | ACTGCGTTTTAATTGTTATT+AGG | - | chr1.2:73784003-73784022 | None:intergenic | 25.0% |
| !!! | AGTAATATTTCTGAGCTTTT+GGG | + | chr1.2:73784852-73784871 | MS.gene99991:intron | 25.0% |
| !!! | AGTTTTTCAAGGTCTAAATA+TGG | - | chr1.2:73783789-73783808 | None:intergenic | 25.0% |
| !!! | GGTATGTTTTTGTTGATTTT+AGG | - | chr1.2:73780428-73780447 | None:intergenic | 25.0% |
| !!! | TTTTTATCTAGAGAAGTGTA+GGG | + | chr1.2:73781113-73781132 | MS.gene99991:intron | 25.0% |
| !!! | TTTTTTATCTAGAGAAGTGT+AGG | + | chr1.2:73781112-73781131 | MS.gene99991:intron | 25.0% |
| !!! | TTTTTTTTCTTTTCAAGCTG+TGG | - | chr1.2:73780892-73780911 | None:intergenic | 25.0% |
| AAAGCTATCAGCAAAACATA+AGG | - | chr1.2:73783535-73783554 | None:intergenic | 30.0% | |
| AAAGTAGGATTAAGAATGAG+GGG | + | chr1.2:73782482-73782501 | MS.gene99991:intron | 30.0% | |
| AACTATAAGGGGAAACTATT+AGG | + | chr1.2:73783805-73783824 | MS.gene99991:intron | 30.0% | |
| AACTTCTAAATACACCCATT+CGG | + | chr1.2:73781620-73781639 | MS.gene99991:intron | 30.0% | |
| AATCATCTCTAGTATGTGAA+AGG | - | chr1.2:73780962-73780981 | None:intergenic | 30.0% | |
| AATGAAAACTGTACTAGAGA+AGG | - | chr1.2:73781092-73781111 | None:intergenic | 30.0% | |
| AATGGGAATGAATATGCTAT+TGG | - | chr1.2:73782644-73782663 | None:intergenic | 30.0% | |
| AATTATTGCTTAGTCGTGTA+TGG | - | chr1.2:73781594-73781613 | None:intergenic | 30.0% | |
| AATTTGTGCCTTTCATTAGA+AGG | + | chr1.2:73781141-73781160 | MS.gene99991:intron | 30.0% | |
| ACTGCATAAATCACATGTAA+AGG | - | chr1.2:73784835-73784854 | None:intergenic | 30.0% | |
| AGACCTTGAAAAACTATAAG+GGG | + | chr1.2:73783794-73783813 | MS.gene99991:intron | 30.0% | |
| ATATGAACTGATTGAGTCTA+AGG | + | chr1.2:73782300-73782319 | MS.gene99991:CDS | 30.0% | |
| ATCAGTCATTCAAGTAAATG+AGG | - | chr1.2:73784467-73784486 | None:intergenic | 30.0% | |
| ATTATCACATCTTGATTCCA+TGG | + | chr1.2:73779566-73779585 | MS.gene99991:CDS | 30.0% | |
| ATTATTGCTTAGTCGTGTAT+GGG | - | chr1.2:73781593-73781612 | None:intergenic | 30.0% | |
| ATTGTCCCAAATAGTTCAAA+TGG | + | chr1.2:73784168-73784187 | MS.gene99991:intron | 30.0% | |
| ATTTACATTGTTGTCTCTCT+TGG | - | chr1.2:73782734-73782753 | None:intergenic | 30.0% | |
| CACATTTCATCAGTAATGAT+AGG | - | chr1.2:73779916-73779935 | None:intergenic | 30.0% | |
| CTATCATTACTGATGAAATG+TGG | + | chr1.2:73779914-73779933 | MS.gene99991:CDS | 30.0% | |
| CTCAAAGAGAAGTTAAAATG+GGG | + | chr1.2:73780855-73780874 | MS.gene99991:intron | 30.0% | |
| CTGCATAAATCACATGTAAA+GGG | - | chr1.2:73784834-73784853 | None:intergenic | 30.0% | |
| CTTCTTGACTTAGTTTCTAA+AGG | + | chr1.2:73781885-73781904 | MS.gene99991:intron | 30.0% | |
| GAAAGTAGGATTAAGAATGA+GGG | + | chr1.2:73782481-73782500 | MS.gene99991:intron | 30.0% | |
| GACTTTCAATAAAGCCATAT+TGG | - | chr1.2:73783513-73783532 | None:intergenic | 30.0% | |
| GATTGTTCCCTTAAATCTTT+GGG | + | chr1.2:73780978-73780997 | MS.gene99991:intron | 30.0% | |
| GCATTACAACTCAATTTATC+CGG | + | chr1.2:73784882-73784901 | MS.gene99991:CDS | 30.0% | |
| TAAATGGAACTGCTGTAAAA+AGG | + | chr1.2:73784282-73784301 | MS.gene99991:intron | 30.0% | |
| TAACTTTGGTACTAGAAACT+TGG | + | chr1.2:73779677-73779696 | MS.gene99991:intron | 30.0% | |
| TAGTTAGTTACTTGAATCGT+GGG | + | chr1.2:73780214-73780233 | MS.gene99991:intron | 30.0% | |
| TATCAGAAGTAAATCCTTTG+GGG | + | chr1.2:73782890-73782909 | MS.gene99991:intron | 30.0% | |
| TATGCTATTAATGAACCATG+TGG | - | chr1.2:73782849-73782868 | None:intergenic | 30.0% | |
| TGAAAGTAGGATTAAGAATG+AGG | + | chr1.2:73782480-73782499 | MS.gene99991:intron | 30.0% | |
| TGATTGTTCCCTTAAATCTT+TGG | + | chr1.2:73780977-73780996 | MS.gene99991:intron | 30.0% | |
| TGTAATTTGATCCATGTAGA+GGG | + | chr1.2:73783886-73783905 | MS.gene99991:intron | 30.0% | |
| TGTACTAGATAGGATATAAG+AGG | - | chr1.2:73781047-73781066 | None:intergenic | 30.0% | |
| TTCAAAAAGAATCCAGTCAA+AGG | - | chr1.2:73782075-73782094 | None:intergenic | 30.0% | |
| ! | ATATATGTCTGAAGTCTTCA+CGG | - | chr1.2:73782608-73782627 | None:intergenic | 30.0% |
| ! | GATGATTTTGCATAGAATTC+AGG | + | chr1.2:73780060-73780079 | MS.gene99991:intron | 30.0% |
| ! | TTTCCCCTTATAGTTTTTCA+AGG | - | chr1.2:73783800-73783819 | None:intergenic | 30.0% |
| !! | ATGGAGAAGTCTTTTTAAAG+TGG | - | chr1.2:73780568-73780587 | None:intergenic | 30.0% |
| !! | ATGTATGAATTTGTTAGGAG+TGG | + | chr1.2:73783555-73783574 | MS.gene99991:intron | 30.0% |
| !! | CAATGATGTTTTTACCTGTT+TGG | + | chr1.2:73783318-73783337 | MS.gene99991:intron | 30.0% |
| !! | CAGTAATATTTCTGAGCTTT+TGG | + | chr1.2:73784851-73784870 | MS.gene99991:intron | 30.0% |
| !! | TTTTATCTAGAGAAGTGTAG+GGG | + | chr1.2:73781114-73781133 | MS.gene99991:intron | 30.0% |
| !!! | ACTTAGCATTTTTCTGAAAC+AGG | - | chr1.2:73784806-73784825 | None:intergenic | 30.0% |
| AAACCTCCACAAATTTGTAC+GGG | + | chr1.2:73783264-73783283 | MS.gene99991:CDS | 35.0% | |
| AAAGAAGAGACATGAAGAAG+TGG | - | chr1.2:73780039-73780058 | None:intergenic | 35.0% | |
| AAGTTGTTCAACAGGTTTGT+TGG | + | chr1.2:73783290-73783309 | MS.gene99991:intron | 35.0% | |
| AATCTTCTCTATCCTTTGAC+TGG | + | chr1.2:73782060-73782079 | MS.gene99991:intron | 35.0% | |
| ACGCAGTCTTCAAAAAGAAT+TGG | + | chr1.2:73784016-73784035 | MS.gene99991:intron | 35.0% | |
| ACTTCTAAATACACCCATTC+GGG | + | chr1.2:73781621-73781640 | MS.gene99991:intron | 35.0% | |
| ACTTCTTCATGTCTCTTCTT+TGG | + | chr1.2:73780038-73780057 | MS.gene99991:intron | 35.0% | |
| AGGATAAACTGAGTATTCTG+TGG | + | chr1.2:73784371-73784390 | MS.gene99991:intron | 35.0% | |
| AGGCAAAAGATTAAACCAGA+TGG | + | chr1.2:73779981-73780000 | MS.gene99991:CDS | 35.0% | |
| ATATGGTATGACTCATCTAC+GGG | - | chr1.2:73779802-73779821 | None:intergenic | 35.0% | |
| ATATTTGACGCCATACTGAA+AGG | - | chr1.2:73784507-73784526 | None:intergenic | 35.0% | |
| CAAACCTCCACAAATTTGTA+CGG | + | chr1.2:73783263-73783282 | MS.gene99991:CDS | 35.0% | |
| CAAGTTCAATATGTTAGGGA+AGG | + | chr1.2:73779483-73779502 | MS.gene99991:CDS | 35.0% | |
| CAATATTCTTCGACAGGAAT+GGG | - | chr1.2:73782661-73782680 | None:intergenic | 35.0% | |
| CACGATTCAAGTAACTAACT+AGG | - | chr1.2:73780215-73780234 | None:intergenic | 35.0% | |
| CATATGGTATGACTCATCTA+CGG | - | chr1.2:73779803-73779822 | None:intergenic | 35.0% | |
| CTAGTTAGTTACTTGAATCG+TGG | + | chr1.2:73780213-73780232 | MS.gene99991:intron | 35.0% | |
| CTTAAAGGAGAGGATATGAA+AGG | - | chr1.2:73780786-73780805 | None:intergenic | 35.0% | |
| CTTCTGATAAACTCTCAGTA+TGG | - | chr1.2:73782879-73782898 | None:intergenic | 35.0% | |
| GAAAATGATGAGCATGAAGT+TGG | + | chr1.2:73779856-73779875 | MS.gene99991:CDS | 35.0% | |
| GAAATGCAATATTCTTCGAC+AGG | - | chr1.2:73782667-73782686 | None:intergenic | 35.0% | |
| GAAGATTACAATGACTTCCT+AGG | - | chr1.2:73782047-73782066 | None:intergenic | 35.0% | |
| GAAGTTACACTTACAGGAAT+AGG | - | chr1.2:73780009-73780028 | None:intergenic | 35.0% | |
| GAATCATAAAGAGCCAGATT+GGG | + | chr1.2:73782092-73782111 | MS.gene99991:intron | 35.0% | |
| GAGGAATAAACAAAACGCAA+TGG | - | chr1.2:73784448-73784467 | None:intergenic | 35.0% | |
| GGAAACTATTAGGAAAGACT+TGG | + | chr1.2:73783815-73783834 | MS.gene99991:intron | 35.0% | |
| GGATAAACTGAGTATTCTGT+GGG | + | chr1.2:73784372-73784391 | MS.gene99991:intron | 35.0% | |
| GGATATAAATGTAGCAACCA+GGG | + | chr1.2:73780184-73780203 | MS.gene99991:intron | 35.0% | |
| GGTTCTACCCAAAGATTTAA+GGG | - | chr1.2:73780988-73781007 | None:intergenic | 35.0% | |
| GTCATACCATATGAAAGAAG+CGG | + | chr1.2:73779810-73779829 | MS.gene99991:CDS | 35.0% | |
| GTGTAATTTGATCCATGTAG+AGG | + | chr1.2:73783885-73783904 | MS.gene99991:intron | 35.0% | |
| TAACTAACTAGGAATTACCC+TGG | - | chr1.2:73780204-73780223 | None:intergenic | 35.0% | |
| TACAACTCAATTTATCCGGA+AGG | + | chr1.2:73784886-73784905 | MS.gene99991:CDS | 35.0% | |
| TATAAGAGGATATGAGCACT+AGG | - | chr1.2:73781033-73781052 | None:intergenic | 35.0% | |
| TCAAACAGGAGCTATAACTT+TGG | + | chr1.2:73779663-73779682 | MS.gene99991:CDS | 35.0% | |
| TGAACTGAAGTTACACTTAC+AGG | - | chr1.2:73780015-73780034 | None:intergenic | 35.0% | |
| TGAATCATAAAGAGCCAGAT+TGG | + | chr1.2:73782091-73782110 | MS.gene99991:intron | 35.0% | |
| TGATCAAATCTCACTTCTTG+TGG | - | chr1.2:73784590-73784609 | None:intergenic | 35.0% | |
| TGCAAACATCTAGAAGATGT+AGG | - | chr1.2:73779407-73779426 | None:intergenic | 35.0% | |
| TGGATATAAATGTAGCAACC+AGG | + | chr1.2:73780183-73780202 | MS.gene99991:intron | 35.0% | |
| TGTGGAGAAAAATTCCAAAC+TGG | + | chr1.2:73782574-73782593 | MS.gene99991:intron | 35.0% | |
| TGTGTGTGTGATATGATCAA+CGG | + | chr1.2:73783698-73783717 | MS.gene99991:intron | 35.0% | |
| TTCAAATGTTGAACATGACG+AGG | + | chr1.2:73779518-73779537 | MS.gene99991:CDS | 35.0% | |
| TTGATTCCATGGAATCTTCT+GGG | + | chr1.2:73779577-73779596 | MS.gene99991:CDS | 35.0% | |
| TTTCTCATGTCCTTTCAGTA+TGG | + | chr1.2:73784494-73784513 | MS.gene99991:intron | 35.0% | |
| ! | AGTAATTTGTCCTCTCTTCT+TGG | - | chr1.2:73780664-73780683 | None:intergenic | 35.0% |
| ! | ATTTGTTAGGAGTGGTGAAT+GGG | + | chr1.2:73783563-73783582 | MS.gene99991:intron | 35.0% |
| ! | CTCTTTTCACTATGAACAGA+AGG | + | chr1.2:73782792-73782811 | MS.gene99991:intron | 35.0% |
| ! | TATATGTCTGAAGTCTTCAC+GGG | - | chr1.2:73782607-73782626 | None:intergenic | 35.0% |
| ! | TCATCATTTTCCCTTTCACT+TGG | - | chr1.2:73779847-73779866 | None:intergenic | 35.0% |
| ! | TGGTTCTACCCAAAGATTTA+AGG | - | chr1.2:73780989-73781008 | None:intergenic | 35.0% |
| !! | AAGAAGTATCAGACCATCAA+AGG | + | chr1.2:73780459-73780478 | MS.gene99991:CDS | 35.0% |
| !! | AATTTGTTAGGAGTGGTGAA+TGG | + | chr1.2:73783562-73783581 | MS.gene99991:intron | 35.0% |
| !! | AGCATTATTAACTTGGTGTG+TGG | + | chr1.2:73783133-73783152 | MS.gene99991:intron | 35.0% |
| !! | AGTTTGGAATTTTTCTCCAC+AGG | - | chr1.2:73782575-73782594 | None:intergenic | 35.0% |
| !! | GCATTATTAACTTGGTGTGT+GGG | + | chr1.2:73783134-73783153 | MS.gene99991:intron | 35.0% |
| !! | TGATGTTTTTACCTGTTTGG+TGG | + | chr1.2:73783321-73783340 | MS.gene99991:intron | 35.0% |
| !!! | AACCAAATGGCTGTGTTTTT+TGG | - | chr1.2:73780595-73780614 | None:intergenic | 35.0% |
| !!! | ACCAAATGGCTGTGTTTTTT+GGG | - | chr1.2:73780594-73780613 | None:intergenic | 35.0% |
| !!! | TATTGTTTTGGCAGCTAGTA+TGG | - | chr1.2:73781917-73781936 | None:intergenic | 35.0% |
| AAAAAAGGATGTGTTCCTGC+AGG | - | chr1.2:73780148-73780167 | None:intergenic | 40.0% | |
| AAACTGAGTATTCTGTGGGT+GGG | + | chr1.2:73784376-73784395 | MS.gene99991:intron | 40.0% | |
| AAGAAGACACCAAGCAAGAT+CGG | - | chr1.2:73781871-73781890 | None:intergenic | 40.0% | |
| AAGCTCCTGTTTATTGCACA+GGG | - | chr1.2:73780280-73780299 | None:intergenic | 40.0% | |
| AATCCTCCGCTTCTTTCATA+TGG | - | chr1.2:73779819-73779838 | None:intergenic | 40.0% | |
| ACATAACCAGCATAGAGATC+TGG | - | chr1.2:73783411-73783430 | None:intergenic | 40.0% | |
| ACCTAGACGTTAATTACCTG+TGG | + | chr1.2:73782556-73782575 | MS.gene99991:intron | 40.0% | |
| ACTGGCTATCTTCTTCAAAC+AGG | + | chr1.2:73779649-73779668 | MS.gene99991:CDS | 40.0% | |
| AGACTTGGAGATCAATGAGT+TGG | + | chr1.2:73783830-73783849 | MS.gene99991:intron | 40.0% | |
| ATACCATATGAAAGAAGCGG+AGG | + | chr1.2:73779813-73779832 | MS.gene99991:CDS | 40.0% | |
| ATTAACGTCTAGGTGAAGGT+AGG | - | chr1.2:73782550-73782569 | None:intergenic | 40.0% | |
| CATAACCAGCATAGAGATCT+GGG | - | chr1.2:73783410-73783429 | None:intergenic | 40.0% | |
| CGTACAAATTTGTGGAGGTT+TGG | - | chr1.2:73783265-73783284 | None:intergenic | 40.0% | |
| CTATACCCTGTGCAATAAAC+AGG | + | chr1.2:73780272-73780291 | MS.gene99991:intron | 40.0% | |
| CTTGATTCCATGGAATCTTC+TGG | + | chr1.2:73779576-73779595 | MS.gene99991:CDS | 40.0% | |
| CTTGTTCCCGTACAAATTTG+TGG | - | chr1.2:73783273-73783292 | None:intergenic | 40.0% | |
| GAAGTTAAAATGGGGAGACA+AGG | + | chr1.2:73780863-73780882 | MS.gene99991:intron | 40.0% | |
| GAATCGGAAATTGTTGGGAA+CGG | + | chr1.2:73781331-73781350 | MS.gene99991:intron | 40.0% | |
| GAGAGGACAAATTACTGCAA+AGG | + | chr1.2:73780668-73780687 | MS.gene99991:intron | 40.0% | |
| GATACTTCTTCGTTCTCAGA+TGG | - | chr1.2:73780449-73780468 | None:intergenic | 40.0% | |
| GATGTTTGCACATTTCCACA+TGG | + | chr1.2:73779417-73779436 | MS.gene99991:CDS | 40.0% | |
| GCAATATTCTTCGACAGGAA+TGG | - | chr1.2:73782662-73782681 | None:intergenic | 40.0% | |
| GCATGAGACCTTCTAATGAA+AGG | - | chr1.2:73781152-73781171 | None:intergenic | 40.0% | |
| GGGTGTTTAATATAGCTGTG+AGG | - | chr1.2:73782529-73782548 | None:intergenic | 40.0% | |
| GGTAATTAACGTCTAGGTGA+AGG | - | chr1.2:73782554-73782573 | None:intergenic | 40.0% | |
| GGTGTATCACTATATTGGGA+AGG | - | chr1.2:73781650-73781669 | None:intergenic | 40.0% | |
| GTATGTGAAAGGAATTGAGC+AGG | - | chr1.2:73780951-73780970 | None:intergenic | 40.0% | |
| GTCCAGAATCGGAAATTGTT+GGG | + | chr1.2:73781326-73781345 | MS.gene99991:intron | 40.0% | |
| GTGGCGTTCATTGGAAATAT+CGG | + | chr1.2:73779933-73779952 | MS.gene99991:CDS | 40.0% | |
| GTTACCATAACCAAGAAGAG+AGG | + | chr1.2:73780651-73780670 | MS.gene99991:intron | 40.0% | |
| TAAACTGAGTATTCTGTGGG+TGG | + | chr1.2:73784375-73784394 | MS.gene99991:intron | 40.0% | |
| TACAATGACTTCCTAGGTCA+AGG | - | chr1.2:73782041-73782060 | None:intergenic | 40.0% | |
| TCCACAGGTAATTAACGTCT+AGG | - | chr1.2:73782560-73782579 | None:intergenic | 40.0% | |
| TGATGAAATGTGGCGTTCAT+TGG | + | chr1.2:73779924-73779943 | MS.gene99991:CDS | 40.0% | |
| TGTTGTCTCTCTTGGATAGA+CGG | - | chr1.2:73782726-73782745 | None:intergenic | 40.0% | |
| TTAACGTCTAGGTGAAGGTA+GGG | - | chr1.2:73782549-73782568 | None:intergenic | 40.0% | |
| TTACAGGAATAGGAACCATC+TGG | - | chr1.2:73779999-73780018 | None:intergenic | 40.0% | |
| TTCCCAACAATTTCCGATTC+TGG | - | chr1.2:73781331-73781350 | None:intergenic | 40.0% | |
| TTGTCCTCTCTTCTTGGTTA+TGG | - | chr1.2:73780658-73780677 | None:intergenic | 40.0% | |
| TTTGTTAGGAGTGGTGAATG+GGG | + | chr1.2:73783564-73783583 | MS.gene99991:intron | 40.0% | |
| ! | CTATGCTGGTTATGTTCCTA+TGG | + | chr1.2:73783416-73783435 | MS.gene99991:CDS | 40.0% |
| ! | CTGATTGAGTCTAAGGTTGA+TGG | + | chr1.2:73782307-73782326 | MS.gene99991:CDS | 40.0% |
| ! | GAGCATGAAGTTGGAGTATT+TGG | + | chr1.2:73779865-73779884 | MS.gene99991:CDS | 40.0% |
| ! | GAGTATTTGGTTCGTCTTCT+AGG | + | chr1.2:73779878-73779897 | MS.gene99991:CDS | 40.0% |
| ! | GTTCTAACTTGCACGCAAAA+AGG | - | chr1.2:73782200-73782219 | None:intergenic | 40.0% |
| !! | AGAAGTAAATCCTTTGGGGT+GGG | + | chr1.2:73782894-73782913 | MS.gene99991:intron | 40.0% |
| !! | TCTTCTCTTGATGGTGAAGT+AGG | + | chr1.2:73779961-73779980 | MS.gene99991:CDS | 40.0% |
| !!! | CCAAATGGCTGTGTTTTTTG+GGG | - | chr1.2:73780593-73780612 | None:intergenic | 40.0% |
| !!! | GCATGTAGTGTGTTTTGAAG+TGG | + | chr1.2:73784412-73784431 | MS.gene99991:intron | 40.0% |
| ACGGGAACAAGTTGTTCAAC+AGG | + | chr1.2:73783282-73783301 | MS.gene99991:CDS | 45.0% | |
| AGAGGATATGAGCACTAGGT+AGG | - | chr1.2:73781029-73781048 | None:intergenic | 45.0% | |
| AGGATTGTGGTCCAAGTGAA+AGG | + | chr1.2:73779833-73779852 | MS.gene99991:CDS | 45.0% | |
| AGTGTGGTGCATAATCTCTG+TGG | + | chr1.2:73784757-73784776 | MS.gene99991:intron | 45.0% | |
| ATCTCTGTGGTGTGTACTGT+TGG | + | chr1.2:73784770-73784789 | MS.gene99991:intron | 45.0% | |
| ATGAAAGAAGCGGAGGATTG+TGG | + | chr1.2:73779820-73779839 | MS.gene99991:CDS | 45.0% | |
| ATGACTCATCTACGGGATTC+TGG | - | chr1.2:73779795-73779814 | None:intergenic | 45.0% | |
| ATGACTTCCTAGGTCAAGGT+TGG | - | chr1.2:73782037-73782056 | None:intergenic | 45.0% | |
| ATTCCATGGAATCTTCTGGG+AGG | + | chr1.2:73779580-73779599 | MS.gene99991:CDS | 45.0% | |
| ATTGGGAAGGTTTCCCGAAT+GGG | - | chr1.2:73781637-73781656 | None:intergenic | 45.0% | |
| CAAGCTCCTGTTTATTGCAC+AGG | - | chr1.2:73780281-73780300 | None:intergenic | 45.0% | |
| CCCCAAAAAACACAGCCATT+TGG | + | chr1.2:73780590-73780609 | MS.gene99991:intron | 45.0% | |
| CTTGTGGACTTCTGTATCTG+CGG | - | chr1.2:73784574-73784593 | None:intergenic | 45.0% | |
| GGAACTGCTGTAAAAAGGTG+AGG | + | chr1.2:73784287-73784306 | MS.gene99991:intron | 45.0% | |
| GGATTGTGGTCCAAGTGAAA+GGG | + | chr1.2:73779834-73779853 | MS.gene99991:CDS | 45.0% | |
| GGGGTCACAAGATCATGAAT+CGG | - | chr1.2:73781846-73781865 | None:intergenic | 45.0% | |
| GGGTCACAAGATCATGAATC+GGG | - | chr1.2:73781845-73781864 | None:intergenic | 45.0% | |
| GGGTTTAGACCAACAAGAGA+GGG | - | chr1.2:73783973-73783992 | None:intergenic | 45.0% | |
| GGTCACAAGATCATGAATCG+GGG | - | chr1.2:73781844-73781863 | None:intergenic | 45.0% | |
| GGTCCAGAATCGGAAATTGT+TGG | + | chr1.2:73781325-73781344 | MS.gene99991:intron | 45.0% | |
| GTCACAAGATCATGAATCGG+GGG | - | chr1.2:73781843-73781862 | None:intergenic | 45.0% | |
| GTTCCCGTACAAATTTGTGG+AGG | - | chr1.2:73783270-73783289 | None:intergenic | 45.0% | |
| TATAGCTGTGAGGCAGTGTT+TGG | - | chr1.2:73782519-73782538 | None:intergenic | 45.0% | |
| TATTGGGAAGGTTTCCCGAA+TGG | - | chr1.2:73781638-73781657 | None:intergenic | 45.0% | |
| TCATCCAACACATCCCAATC+TGG | - | chr1.2:73782108-73782127 | None:intergenic | 45.0% | |
| TCTCTCTTGGATAGACGGTT+GGG | - | chr1.2:73782721-73782740 | None:intergenic | 45.0% | |
| TGACTTCCTAGGTCAAGGTT+GGG | - | chr1.2:73782036-73782055 | None:intergenic | 45.0% | |
| TGATGGAGATGGTAACTGTC+AGG | + | chr1.2:73782324-73782343 | MS.gene99991:CDS | 45.0% | |
| TGCTGCAGATTGGGTATGAA+GGG | + | chr1.2:73783608-73783627 | MS.gene99991:intron | 45.0% | |
| TGCTGTAAAAAGGTGAGGAC+CGG | + | chr1.2:73784292-73784311 | MS.gene99991:intron | 45.0% | |
| TGCTTAGTCGTGTATGGGTA+AGG | - | chr1.2:73781588-73781607 | None:intergenic | 45.0% | |
| TGCTTGAGTAGGTCCAGAAT+CGG | + | chr1.2:73781315-73781334 | MS.gene99991:intron | 45.0% | |
| ! | AAGCCTTTTCCCACTAAGTG+GGG | - | chr1.2:73783912-73783931 | None:intergenic | 45.0% |
| ! | ACCTTCAGAAGAAGGGGTTT+TGG | - | chr1.2:73781964-73781983 | None:intergenic | 45.0% |
| ! | ATTTCTGAGCTTTTGGGCAG+AGG | + | chr1.2:73784858-73784877 | MS.gene99991:CDS | 45.0% |
| ! | CAAGCCTTTTCCCACTAAGT+GGG | - | chr1.2:73783913-73783932 | None:intergenic | 45.0% |
| ! | CAGAAGTAAATCCTTTGGGG+TGG | + | chr1.2:73782893-73782912 | MS.gene99991:intron | 45.0% |
| ! | GAGAGGGCTCACAAAGATTT+TGG | - | chr1.2:73783957-73783976 | None:intergenic | 45.0% |
| ! | GGGCTCACAAAGATTTTGGA+AGG | - | chr1.2:73783953-73783972 | None:intergenic | 45.0% |
| ! | TTTGGTTCGTCTTCTAGGTC+AGG | + | chr1.2:73779883-73779902 | MS.gene99991:CDS | 45.0% |
| !! | GAAGTAAATCCTTTGGGGTG+GGG | + | chr1.2:73782895-73782914 | MS.gene99991:intron | 45.0% |
| !! | GAGTCTAAGGTTGATGGAGA+TGG | + | chr1.2:73782313-73782332 | MS.gene99991:CDS | 45.0% |
| !! | TAAAGGAAGCACCACCAAAC+AGG | - | chr1.2:73783335-73783354 | None:intergenic | 45.0% |
| ACACCAAGCAAGATCGGTAG+GGG | - | chr1.2:73781865-73781884 | None:intergenic | 50.0% | |
| ACCAGCATAGAGATCTGGGT+CGG | - | chr1.2:73783406-73783425 | None:intergenic | 50.0% | |
| ACCATCAAAGGCTGCTAGAC+AGG | + | chr1.2:73780471-73780490 | MS.gene99991:CDS | 50.0% | |
| ACCTGTCTAGCAGCCTTTGA+TGG | - | chr1.2:73780475-73780494 | None:intergenic | 50.0% | |
| AGACACCAAGCAAGATCGGT+AGG | - | chr1.2:73781867-73781886 | None:intergenic | 50.0% | |
| AGAGCCAGATTGGGATGTGT+TGG | + | chr1.2:73782101-73782120 | MS.gene99991:intron | 50.0% | |
| CACACACACACATGCATGCA+TGG | - | chr1.2:73783686-73783705 | None:intergenic | 50.0% | |
| CATCCTCCCAGAAGATTCCA+TGG | - | chr1.2:73779586-73779605 | None:intergenic | 50.0% | |
| CCACTTAGTGGGAAAAGGCT+TGG | + | chr1.2:73783911-73783930 | MS.gene99991:intron | 50.0% | |
| CTGCAGACCTTCAGAAGAAG+GGG | - | chr1.2:73781970-73781989 | None:intergenic | 50.0% | |
| CTGCTGCAGATTGGGTATGA+AGG | + | chr1.2:73783607-73783626 | MS.gene99991:intron | 50.0% | |
| CTTTGGGTAGAACCACAGAG+TGG | + | chr1.2:73780994-73781013 | MS.gene99991:intron | 50.0% | |
| CTTTGTGAGCCCTCTCTTGT+TGG | + | chr1.2:73783961-73783980 | MS.gene99991:intron | 50.0% | |
| GACACCAAGCAAGATCGGTA+GGG | - | chr1.2:73781866-73781885 | None:intergenic | 50.0% | |
| GATCCTGACGTTGTTCGATG+GGG | + | chr1.2:73779381-73779400 | MS.gene99991:CDS | 50.0% | |
| GCCAAAACCCCTTCTTCTGA+AGG | + | chr1.2:73781960-73781979 | MS.gene99991:intron | 50.0% | |
| GCTGCAGACCTTCAGAAGAA+GGG | - | chr1.2:73781971-73781990 | None:intergenic | 50.0% | |
| GGAGATGGTAACTGTCAGGT+TGG | + | chr1.2:73782328-73782347 | MS.gene99991:intron | 50.0% | |
| GGATCCTGACGTTGTTCGAT+GGG | + | chr1.2:73779380-73779399 | MS.gene99991:CDS | 50.0% | |
| GGGGTTTAGACCAACAAGAG+AGG | - | chr1.2:73783974-73783993 | None:intergenic | 50.0% | |
| GTCTCTCTTGGATAGACGGT+TGG | - | chr1.2:73782722-73782741 | None:intergenic | 50.0% | |
| TACCATCTGCGTGCTTGAGT+AGG | + | chr1.2:73781304-73781323 | MS.gene99991:intron | 50.0% | |
| TAGCCAGTCCTGTGCATCTA+CGG | - | chr1.2:73779637-73779656 | None:intergenic | 50.0% | |
| TCCTAGGTCAAGGTTGGGAT+GGG | - | chr1.2:73782031-73782050 | None:intergenic | 50.0% | |
| TCGGACGAGTCTTCTCTTGA+TGG | + | chr1.2:73779952-73779971 | MS.gene99991:CDS | 50.0% | |
| TGAATCGGGGGATCACAACA+CGG | - | chr1.2:73781831-73781850 | None:intergenic | 50.0% | |
| TGCTGCAGACCTTCAGAAGA+AGG | - | chr1.2:73781972-73781991 | None:intergenic | 50.0% | |
| TGGATCCTGACGTTGTTCGA+TGG | + | chr1.2:73779379-73779398 | MS.gene99991:CDS | 50.0% | |
| TTCCTAGGTCAAGGTTGGGA+TGG | - | chr1.2:73782032-73782051 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTTTCCCACTAAG+TGG | - | chr1.2:73783914-73783933 | None:intergenic | 50.0% |
| !!! | GGCTGTGTTTTTTGGGGAGA+TGG | - | chr1.2:73780587-73780606 | None:intergenic | 50.0% |
| ACACCGAGTTACGACACCAG+GGG | - | chr1.2:73779448-73779467 | None:intergenic | 55.0% | |
| ACGCGTGGAAGCGGTGAAAT+CGG | + | chr1.2:73781371-73781390 | MS.gene99991:intron | 55.0% | |
| ACTAAGTGGGGCCCTCTACA+TGG | - | chr1.2:73783900-73783919 | None:intergenic | 55.0% | |
| ATGTAGAGGGCCCCACTTAG+TGG | + | chr1.2:73783899-73783918 | MS.gene99991:intron | 55.0% | |
| CACACCGAGTTACGACACCA+GGG | - | chr1.2:73779449-73779468 | None:intergenic | 55.0% | |
| CATCCGTAGATGCACAGGAC+TGG | + | chr1.2:73779631-73779650 | MS.gene99991:CDS | 55.0% | |
| CCCGATACTTCAAGGAGACG+CGG | - | chr1.2:73781397-73781416 | None:intergenic | 55.0% | |
| CCTGCGAACCCGATACTTCA+AGG | - | chr1.2:73781405-73781424 | None:intergenic | 55.0% | |
| CTCTTGGATAGACGGTTGGG+TGG | - | chr1.2:73782718-73782737 | None:intergenic | 55.0% | |
| GAATCGGGGGATCACAACAC+GGG | - | chr1.2:73781830-73781849 | None:intergenic | 55.0% | |
| GACCTACTCAAGCACGCAGA+TGG | - | chr1.2:73781309-73781328 | None:intergenic | 55.0% | |
| GCCGCGTCTCCTTGAAGTAT+CGG | + | chr1.2:73781393-73781412 | MS.gene99991:intron | 55.0% | |
| GGAAATTGTTGGGAACGGCC+AGG | + | chr1.2:73781336-73781355 | MS.gene99991:intron | 55.0% | |
| GGGTAGAACCACAGAGTGGA+GGG | + | chr1.2:73780998-73781017 | MS.gene99991:intron | 55.0% | |
| GGTAGAACCACAGAGTGGAG+GGG | + | chr1.2:73780999-73781018 | MS.gene99991:intron | 55.0% | |
| GTTGCAGGCTGCTGCAGATT+GGG | + | chr1.2:73783599-73783618 | MS.gene99991:intron | 55.0% | |
| TCACACCGAGTTACGACACC+AGG | - | chr1.2:73779450-73779469 | None:intergenic | 55.0% | |
| TCCCATCCCAACCTTGACCT+AGG | + | chr1.2:73782027-73782046 | MS.gene99991:intron | 55.0% | |
| TCCGACCCAGATCTCTATGC+TGG | + | chr1.2:73783402-73783421 | MS.gene99991:CDS | 55.0% | |
| TGACCCCTACCGATCTTGCT+TGG | + | chr1.2:73781859-73781878 | MS.gene99991:intron | 55.0% | |
| TGGGTAGAACCACAGAGTGG+AGG | + | chr1.2:73780997-73781016 | MS.gene99991:intron | 55.0% | |
| TGTAGAGGGCCCCACTTAGT+GGG | + | chr1.2:73783900-73783919 | MS.gene99991:intron | 55.0% | |
| TTTCCACATGGTCGATCCCC+TGG | + | chr1.2:73779429-73779448 | MS.gene99991:CDS | 55.0% | |
| ! | ACCGCTTCCACGCGTTTTTG+CGG | - | chr1.2:73781366-73781385 | None:intergenic | 55.0% |
| ! | CCGCGTCTCCTTGAAGTATC+GGG | + | chr1.2:73781394-73781413 | MS.gene99991:intron | 55.0% |
| !! | AATCCTTTGGGGTGGGGTAG+AGG | + | chr1.2:73782901-73782920 | MS.gene99991:intron | 55.0% |
| !! | ATCCTTTGGGGTGGGGTAGA+GGG | + | chr1.2:73782902-73782921 | MS.gene99991:intron | 55.0% |
| !! | CCTTGAAGTATCGGGTTCGC+AGG | + | chr1.2:73781402-73781421 | MS.gene99991:intron | 55.0% |
| !! | GAAGTATCGGGTTCGCAGGT+CGG | + | chr1.2:73781406-73781425 | MS.gene99991:intron | 55.0% |
| !! | GATCCCCTGGTGTCGTAACT+CGG | + | chr1.2:73779442-73779461 | MS.gene99991:CDS | 55.0% |
| AACCCTCTACCCCACCCCAA+AGG | - | chr1.2:73782907-73782926 | None:intergenic | 60.0% | |
| ACACCAGGGGATCGACCATG+TGG | - | chr1.2:73779435-73779454 | None:intergenic | 60.0% | |
| AGGATCGCCGCAAAAACGCG+TGG | + | chr1.2:73781356-73781375 | MS.gene99991:intron | 60.0% | |
| AGGCCCCATCGAACAACGTC+AGG | - | chr1.2:73779387-73779406 | None:intergenic | 60.0% | |
| CACATAACGCTGCGACCTGC+AGG | + | chr1.2:73780130-73780149 | MS.gene99991:intron | 60.0% | |
| CGTTGCAGGCTGCTGCAGAT+TGG | + | chr1.2:73783598-73783617 | MS.gene99991:intron | 60.0% | |
| GCCGCAAAAACGCGTGGAAG+CGG | + | chr1.2:73781362-73781381 | MS.gene99991:intron | 60.0% | |
| GCGAGCATCCGTAGATGCAC+AGG | + | chr1.2:73779626-73779645 | MS.gene99991:CDS | 60.0% | |
| GGGCCCCACTTAGTGGGAAA+AGG | + | chr1.2:73783906-73783925 | MS.gene99991:intron | 60.0% | |
| GGGCGATCATGTCACGTTGC+AGG | + | chr1.2:73783584-73783603 | MS.gene99991:intron | 60.0% | |
| TCACGGGAGCAGCACCAGTT+TGG | - | chr1.2:73782591-73782610 | None:intergenic | 60.0% | |
| ! | ACGCGTTTTTGCGGCGATCC+TGG | - | chr1.2:73781357-73781376 | None:intergenic | 60.0% |
| AGGTGTGCCCCTCCACTCTG+TGG | - | chr1.2:73781009-73781028 | None:intergenic | 65.0% | |
| ! | CGGGTTCGCAGGTCGGTTCA+CGG | + | chr1.2:73781413-73781432 | MS.gene99991:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 73779360 | 73784910 | 73779360 | ID=MS.gene99991 |
| chr1.2 | mRNA | 73779360 | 73784910 | 73779360 | ID=MS.gene99991.t1;Parent=MS.gene99991 |
| chr1.2 | exon | 73779360 | 73779684 | 73779360 | ID=MS.gene99991.t1.exon1;Parent=MS.gene99991.t1 |
| chr1.2 | CDS | 73779360 | 73779684 | 73779360 | ID=cds.MS.gene99991.t1;Parent=MS.gene99991.t1 |
| chr1.2 | exon | 73779779 | 73780014 | 73779779 | ID=MS.gene99991.t1.exon2;Parent=MS.gene99991.t1 |
| chr1.2 | CDS | 73779779 | 73780014 | 73779779 | ID=cds.MS.gene99991.t1;Parent=MS.gene99991.t1 |
| chr1.2 | exon | 73780419 | 73780492 | 73780419 | ID=MS.gene99991.t1.exon3;Parent=MS.gene99991.t1 |
| chr1.2 | CDS | 73780419 | 73780492 | 73780419 | ID=cds.MS.gene99991.t1;Parent=MS.gene99991.t1 |
| chr1.2 | exon | 73782291 | 73782345 | 73782291 | ID=MS.gene99991.t1.exon4;Parent=MS.gene99991.t1 |
| chr1.2 | CDS | 73782291 | 73782345 | 73782291 | ID=cds.MS.gene99991.t1;Parent=MS.gene99991.t1 |
| chr1.2 | exon | 73783229 | 73783303 | 73783229 | ID=MS.gene99991.t1.exon5;Parent=MS.gene99991.t1 |
| chr1.2 | CDS | 73783229 | 73783303 | 73783229 | ID=cds.MS.gene99991.t1;Parent=MS.gene99991.t1 |
| chr1.2 | exon | 73783396 | 73783444 | 73783396 | ID=MS.gene99991.t1.exon6;Parent=MS.gene99991.t1 |
| chr1.2 | CDS | 73783396 | 73783444 | 73783396 | ID=cds.MS.gene99991.t1;Parent=MS.gene99991.t1 |
| chr1.2 | exon | 73784512 | 73784595 | 73784512 | ID=MS.gene99991.t1.exon7;Parent=MS.gene99991.t1 |
| chr1.2 | CDS | 73784512 | 73784595 | 73784512 | ID=cds.MS.gene99991.t1;Parent=MS.gene99991.t1 |
| chr1.2 | exon | 73784854 | 73784910 | 73784854 | ID=MS.gene99991.t1.exon8;Parent=MS.gene99991.t1 |
| chr1.2 | CDS | 73784854 | 73784910 | 73784854 | ID=cds.MS.gene99991.t1;Parent=MS.gene99991.t1 |
| Gene Sequence |
| Protein sequence |
