AlfalfaGEDB | MsG0380016027.01

M. sativa cultivar ZhongmuNo.1 / MsG0380016027.01

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380016027.01.T01	XP_003601472.1	91.713	181	9	2	1	181	1	175	2.14E-116	337

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380016027.01.T01	G7J826	91.713	181	9	2	1	181	1	175	1.02e-116	337

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080047815.01	MsG0380016027.01	0.890007	1.453431e-73	1.200411e-69
MsG0080048258.01	MsG0380016027.01	0.827355	1.637527e-54	1.577282e-51
MsG0080048775.01	MsG0380016027.01	0.854082	1.559365e-61	3.442673e-58
MsG0080048781.01	MsG0380016027.01	0.863342	2.666226e-64	8.056636e-61
MsG0080048797.01	MsG0380016027.01	0.804301	2.307069e-49	1.185355e-46
MsG0180000111.01	MsG0380016027.01	0.807045	6.122232e-50	3.375316e-47
MsG0180000718.01	MsG0380016027.01	0.805680	1.187692e-49	6.322933e-47
MsG0180001293.01	MsG0380016027.01	0.880052	7.541247e-70	4.187664e-66
MsG0180001588.01	MsG0380016027.01	0.822751	2.003150e-53	1.691744e-50
MsG0180001719.01	MsG0380016027.01	0.836177	1.090348e-56	1.363519e-53
MsG0180002134.01	MsG0380016027.01	0.820677	6.045651e-53	4.815065e-50
MsG0180002211.01	MsG0380016027.01	0.806254	8.993349e-50	4.858697e-47
MsG0180002218.01	MsG0380016027.01	0.857079	2.083456e-62	5.080475e-59
MsG0180002397.01	MsG0380016027.01	0.867281	1.536784e-65	5.335137e-62
MsG0180002583.01	MsG0380016027.01	0.811654	6.283826e-51	3.911682e-48
MsG0180003421.01	MsG0380016027.01	0.830064	3.623258e-55	3.776255e-52
MsG0180003485.01	MsG0380016027.01	0.833321	5.702873e-56	6.545088e-53
MsG0180003658.01	MsG0380016027.01	0.820447	6.827784e-53	5.403847e-50
MsG0180003698.01	MsG0380016027.01	0.830965	2.181811e-55	2.334669e-52
MsG0180003796.01	MsG0380016027.01	0.823157	1.611322e-53	1.376430e-50
MsG0180003857.01	MsG0380016027.01	0.888493	5.621579e-73	4.365067e-69
MsG0180003905.01	MsG0380016027.01	0.805547	1.266455e-49	6.718832e-47
MsG0180003983.01	MsG0380016027.01	0.810454	1.143616e-50	6.896234e-48
MsG0180004120.01	MsG0380016027.01	0.897697	1.093111e-76	1.249541e-72
MsG0180004185.01	MsG0380016027.01	0.873792	1.116898e-67	4.908800e-64
MsG0180004299.01	MsG0380016027.01	0.884946	1.241638e-71	8.358833e-68
MsG0180004538.01	MsG0380016027.01	0.900146	9.810123e-78	1.251796e-73
MsG0180004583.01	MsG0380016027.01	0.914672	1.455926e-84	3.661038e-80
MsG0180004828.01	MsG0380016027.01	0.806925	6.489817e-50	3.566874e-47
MsG0180004835.01	MsG0380016027.01	0.803382	3.579817e-49	1.796300e-46
MsG0180004972.01	MsG0380016027.01	0.813814	2.115937e-51	1.395965e-48
MsG0180004994.01	MsG0380016027.01	0.833553	4.991873e-56	5.768801e-53
MsG0180004995.01	MsG0380016027.01	0.818373	2.027820e-52	1.515306e-49
MsG0180005048.01	MsG0380016027.01	0.853578	2.178455e-61	4.729415e-58
MsG0180005553.01	MsG0380016027.01	0.820062	8.365787e-53	6.551372e-50
MsG0180005655.01	MsG0380016027.01	0.869359	3.285272e-66	1.229578e-62
MsG0180006133.01	MsG0380016027.01	0.892596	1.372508e-74	1.263243e-70
MsG0380012118.01	MsG0380016027.01	0.824821	6.557414e-54	5.873214e-51
MsG0380012956.01	MsG0380016027.01	0.847473	1.130866e-59	2.012365e-56
MsG0380013584.01	MsG0380016027.01	0.844238	8.557943e-59	1.372942e-55
MsG0380014542.01	MsG0380016027.01	0.878141	3.569135e-69	1.842595e-65
MsG0380014544.01	MsG0380016027.01	0.822848	1.901475e-53	1.610248e-50
MsG0380014666.01	MsG0380016027.01	0.891066	5.572701e-74	4.812107e-70
MsG0380014751.01	MsG0380016027.01	0.803782	2.957247e-49	1.499301e-46
MsG0380015090.01	MsG0380016027.01	0.885694	6.520651e-72	4.519972e-68
MsG0380015219.01	MsG0380016027.01	0.831012	2.124184e-55	2.276212e-52
MsG0380015340.01	MsG0380016027.01	0.866542	2.642569e-65	8.939589e-62
MsG0380015394.01	MsG0380016027.01	0.866483	2.759049e-65	9.313703e-62
MsG0380015552.01	MsG0380016027.01	0.806996	6.270225e-50	3.452478e-47
MsG0380015825.01	MsG0380016027.01	0.806423	8.286689e-50	4.495996e-47
MsG0380015954.01	MsG0380016027.01	0.867420	1.386966e-65	4.839541e-62
MsG0380016027.01	MsG0380016091.01	0.859785	3.252283e-63	8.692509e-60
MsG0380016027.01	MsG0380016092.01	0.814144	1.789237e-51	1.191020e-48
MsG0380016027.01	MsG0380016165.01	0.817121	3.886054e-52	2.805478e-49
MsG0380016027.01	MsG0380016217.01	0.853751	1.942157e-61	4.240204e-58
MsG0380016027.01	MsG0380016225.01	0.856373	3.361252e-62	8.005884e-59
MsG0380016027.01	MsG0380017128.01	0.806039	9.984281e-50	5.364275e-47
MsG0380016027.01	MsG0380017180.01	0.811286	7.552456e-51	4.656174e-48
MsG0380016027.01	MsG0380017181.01	0.827341	1.650919e-54	1.589496e-51
MsG0380016027.01	MsG0380017282.01	0.835708	1.433403e-56	1.767192e-53
MsG0380016027.01	MsG0380017332.01	0.856205	3.766254e-62	8.919370e-59
MsG0380016027.01	MsG0380017361.01	0.845438	4.062048e-59	6.769192e-56
MsG0380016027.01	MsG0380017440.01	0.850373	1.771149e-60	3.461967e-57
MsG0380016027.01	MsG0380017605.01	0.877082	8.359607e-69	4.149483e-65
MsG0380016027.01	MsG0380017632.01	0.863603	2.212156e-64	6.745177e-61
MsG0380016027.01	MsG0380017696.01	0.856069	4.127507e-62	9.731104e-59
MsG0380016027.01	MsG0380017932.01	0.851751	7.235435e-61	1.479237e-57
MsG0380016027.01	MsG0380018055.01	0.830663	2.586479e-55	2.743142e-52
MsG0380016027.01	MsG0480018106.01	0.814016	1.909319e-51	1.266575e-48
MsG0380016027.01	MsG0480018228.01	0.876853	1.003609e-68	4.940879e-65
MsG0380016027.01	MsG0480018526.01	0.814636	1.393136e-51	9.397864e-49
MsG0380016027.01	MsG0480018767.01	0.801511	8.700632e-49	4.162743e-46
MsG0380016027.01	MsG0480018785.01	0.860580	1.871186e-63	5.140003e-60
MsG0380016027.01	MsG0480020366.01	0.804031	2.624966e-49	1.339403e-46
MsG0380016027.01	MsG0480020398.01	0.870565	1.325698e-66	5.180766e-63
MsG0380016027.01	MsG0480020856.01	0.882194	1.278417e-70	7.714184e-67
MsG0380016027.01	MsG0480020921.01	0.825684	4.098431e-54	3.762064e-51
MsG0380016027.01	MsG0480020926.01	0.809021	2.325150e-50	1.349966e-47
MsG0380016027.01	MsG0480020937.01	0.821750	3.420082e-53	2.806851e-50
MsG0380016027.01	MsG0480021100.01	0.863573	2.261064e-64	6.886245e-61
MsG0380016027.01	MsG0480021301.01	0.871738	5.436396e-67	2.216937e-63
MsG0380016027.01	MsG0480021456.01	0.849062	4.115845e-60	7.708614e-57
MsG0380016027.01	MsG0480021704.01	0.827220	1.764497e-54	1.692669e-51
MsG0380016027.01	MsG0480021773.01	0.906264	1.787083e-80	3.001997e-76
MsG0380016027.01	MsG0480021902.01	0.893938	3.940888e-75	3.836308e-71
MsG0380016027.01	MsG0480022307.01	0.878345	3.026412e-69	1.574807e-65
MsG0380016027.01	MsG0480022378.01	0.861178	1.231561e-63	3.453543e-60
MsG0380016027.01	MsG0480022559.01	0.856488	3.110084e-62	7.436465e-59
MsG0380016027.01	MsG0480022784.01	0.863238	2.870693e-64	8.643018e-61
MsG0380016027.01	MsG0480022991.01	0.853975	1.674085e-61	3.682576e-58
MsG0380016027.01	MsG0480023003.01	0.873525	1.373988e-67	5.982560e-64
MsG0380016027.01	MsG0480023424.01	0.864660	1.035996e-64	3.278795e-61
MsG0380016027.01	MsG0480023426.01	0.882058	1.431252e-70	8.591047e-67
MsG0380016027.01	MsG0480023428.01	0.822053	2.909508e-53	2.408526e-50
MsG0380016027.01	MsG0480023532.01	0.817397	3.368726e-52	2.450570e-49
MsG0380016027.01	MsG0480023653.01	0.832370	9.827720e-56	1.096213e-52
MsG0380016027.01	MsG0480023672.01	0.806206	9.207743e-50	4.968451e-47
MsG0380016027.01	MsG0480023679.01	0.822936	1.813742e-53	1.539781e-50
MsG0380016027.01	MsG0480023706.01	0.861553	9.463910e-64	2.688221e-60
MsG0380016027.01	MsG0480023842.01	0.835511	1.608614e-56	1.971334e-53
MsG0380016027.01	MsG0480024002.01	0.821843	3.254891e-53	2.678574e-50
MsG0380016027.01	MsG0480024019.01	0.833872	4.156059e-56	4.849279e-53
MsG0380016027.01	MsG0580024060.01	0.832479	9.233978e-56	1.033369e-52
MsG0380016027.01	MsG0580024158.01	0.802504	5.437450e-49	2.668003e-46
MsG0380016027.01	MsG0580024276.01	0.862842	3.804798e-64	1.130105e-60
MsG0380016027.01	MsG0580024657.01	0.801283	9.685704e-49	4.607618e-46
MsG0380016027.01	MsG0580024742.01	0.834758	2.489852e-56	2.982925e-53
MsG0380016027.01	MsG0580024748.01	0.805894	1.070769e-49	5.731764e-47
MsG0380016027.01	MsG0580024787.01	0.876873	9.871798e-69	4.864011e-65
MsG0380016027.01	MsG0580024954.01	0.837610	4.695879e-57	6.132508e-54
MsG0380016027.01	MsG0580025177.01	0.833239	5.979010e-56	6.844570e-53
MsG0380016027.01	MsG0580025186.01	0.885535	7.479607e-72	5.153592e-68
MsG0380016027.01	MsG0580025203.01	0.816443	5.514831e-52	3.908051e-49
MsG0380016027.01	MsG0580025504.01	0.883036	6.301723e-71	3.930389e-67
MsG0380016027.01	MsG0580025506.01	0.833577	4.923325e-56	5.693325e-53
MsG0380016027.01	MsG0580025775.01	0.843789	1.128992e-58	1.785881e-55
MsG0380016027.01	MsG0580028923.01	0.824861	6.415894e-54	5.753047e-51
MsG0380016027.01	MsG0580028927.01	0.854917	8.944546e-62	2.029446e-58
MsG0380016027.01	MsG0580028955.01	0.875187	3.753081e-68	1.736754e-64
MsG0380016027.01	MsG0580029102.01	0.835812	1.349317e-56	1.668529e-53
MsG0380016027.01	MsG0580029123.01	0.814682	1.360168e-51	9.187042e-49
MsG0380016027.01	MsG0580029261.01	0.816745	4.719459e-52	3.372316e-49
MsG0380016027.01	MsG0580029591.01	0.868197	7.805813e-66	2.799448e-62
MsG0380016027.01	MsG0680030383.01	0.813194	2.895632e-51	1.878388e-48
MsG0380016027.01	MsG0680031356.01	0.802451	5.576680e-49	2.732614e-46
MsG0380016027.01	MsG0680035350.01	0.855607	5.633936e-62	1.307989e-58
MsG0380016027.01	MsG0680035776.01	0.849044	4.162734e-60	7.791645e-57
MsG0380016027.01	MsG0680035792.01	0.842549	2.416199e-58	3.676396e-55
MsG0380016027.01	MsG0780036534.01	0.862017	6.825207e-64	1.969307e-60
MsG0380016027.01	MsG0780036553.01	0.819825	9.476429e-53	7.371795e-50
MsG0380016027.01	MsG0780037741.01	0.850927	1.237246e-60	2.462832e-57
MsG0380016027.01	MsG0780038393.01	0.812644	3.822104e-51	2.443406e-48
MsG0380016027.01	MsG0780038402.01	0.832320	1.011192e-55	1.126140e-52
MsG0380016027.01	MsG0780038736.01	0.887502	1.348688e-72	1.005500e-68
MsG0380016027.01	MsG0780039861.01	0.869683	2.577193e-66	9.756739e-63
MsG0380016027.01	MsG0780040364.01	0.810947	8.945974e-51	5.466915e-48
MsG0380016027.01	MsG0780040620.01	0.876684	1.147931e-68	5.616335e-65
MsG0380016027.01	MsG0780040641.01	0.877487	6.041274e-69	3.043300e-65
MsG0380016027.01	MsG0780040899.01	0.872119	4.060714e-67	1.678984e-63
MsG0380016027.01	MsG0780041008.01	0.876584	1.243279e-68	6.059500e-65
MsG0380016027.01	MsG0780041143.01	0.849162	3.859461e-60	7.252966e-57
MsG0380016027.01	MsG0780041273.01	0.861300	1.130222e-63	3.183576e-60
MsG0380016027.01	MsG0780041340.01	0.815928	7.191332e-52	5.024811e-49
MsG0380016027.01	MsG0780041359.01	0.870369	1.536965e-66	5.963433e-63
MsG0380016027.01	MsG0780041546.01	0.803564	3.282492e-49	1.654991e-46
MsG0380016027.01	MsG0880043684.01	0.832066	1.168531e-55	1.291837e-52
MsG0380016027.01	MsG0880043714.01	0.836735	7.859389e-57	9.993826e-54
MsG0380016027.01	MsG0880043752.01	0.830237	3.288491e-55	3.444864e-52
MsG0380016027.01	MsG0880044103.01	0.823694	1.206905e-53	1.046896e-50
MsG0380016027.01	MsG0880044437.01	0.866918	2.005941e-65	6.876577e-62
MsG0380016027.01	MsG0880044989.01	0.816244	6.109616e-52	4.306446e-49
MsG0380016027.01	MsG0880045015.01	0.845039	5.206329e-59	8.566650e-56
MsG0380016027.01	MsG0880045439.01	0.825641	4.194984e-54	3.845895e-51
MsG0380016027.01	MsG0880045584.01	0.836739	7.842956e-57	9.973769e-54
MsG0380016027.01	MsG0880045612.01	0.894499	2.329001e-75	2.320868e-71
MsG0380016027.01	MsG0880045647.01	0.910063	2.846312e-82	5.708811e-78
MsG0380016027.01	MsG0880045879.01	0.812853	3.440129e-51	2.211184e-48
MsG0380016027.01	MsG0880046431.01	0.817849	2.664423e-52	1.962383e-49
MsG0380016027.01	MsG0880046529.01	0.831319	1.785441e-55	1.930656e-52
MsG0380016027.01	MsG0880046646.01	0.831914	1.273753e-55	1.402072e-52
MsG0380016027.01	MsG0880046859.01	0.811009	8.675902e-51	5.310571e-48
MsG0380016027.01	MsG0880046904.01	0.878318	3.093940e-69	1.608259e-65
MsG0380016027.01	MsG0880046905.01	0.883856	3.147374e-71	2.029529e-67
MsG0380016027.01	MsG0880046906.01	0.800125	1.668715e-48	7.708582e-46
MsG0380016027.01	MsG0880046993.01	0.831362	1.742795e-55	1.886982e-52
MsG0380016027.01	MsG0880047345.01	0.804797	1.818074e-49	9.461684e-47
MsG0380016027.01	MsG0880047649.01	0.897063	2.020557e-76	2.244678e-72
MsG0380016027.01	MsG0880047681.01	0.816678	4.885931e-52	3.484827e-49
MsG0280006540.01	MsG0380016027.01	0.829467	5.065268e-55	5.188460e-52
MsG0280006563.01	MsG0380016027.01	0.860200	2.438226e-63	6.611304e-60
MsG0280006909.01	MsG0380016027.01	0.803138	4.021297e-49	2.005279e-46
MsG0280007092.01	MsG0380016027.01	0.806235	9.076192e-50	4.901186e-47
MsG0280007688.01	MsG0380016027.01	0.807655	4.545946e-50	2.546287e-47
MsG0280007919.01	MsG0380016027.01	0.807229	5.597406e-50	3.100807e-47
MsG0280009216.01	MsG0380016027.01	0.805449	1.327840e-49	7.026962e-47
MsG0280009866.01	MsG0380016027.01	0.830288	3.196122e-55	3.352690e-52

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380016027.01.T01	MTR_3g082070	91.713	181	9	2	1	181	1	175	2.59e-120	337

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380016027.01.T01	AT4G15140	75.472	53	12	1	20	71	19	71	8.70e-20	82.0

Find 45 sgRNAs with CRISPR-Local

Find 53 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AATTCCTTCAATCTCAAATT+TGG	0.164475	3:-78117249	MsG0380016027.01.T01:CDS
ACTACTCTCAAAGCACTATT+TGG	0.262045	3:-78117410	MsG0380016027.01.T01:CDS
ACCCTATTCTCCCATGGATT+TGG	0.270878	3:-78117370	MsG0380016027.01.T01:CDS
AAATCATAAGCAGAGTTATC+TGG	0.289654	3:+78117435	None:intergenic
TAACCCCATCATCAATAATA+AGG	0.309837	3:-78117148	MsG0380016027.01.T01:intron
ATGTCATAGGAGAGTTTCTT+TGG	0.315934	3:+78117336	None:intergenic
ATTTGATCCTTGAAGGTGTT+GGG	0.350471	3:+78117178	None:intergenic
AAGCACTATTTGGTCCCCTT+TGG	0.370267	3:-78117400	MsG0380016027.01.T01:CDS
AAATACCTTATTATTGATGA+TGG	0.374171	3:+78117143	None:intergenic
ATTTCTCCCCAACACCTTCA+AGG	0.390688	3:-78117185	MsG0380016027.01.T01:CDS
TCCAAATCCATGGGAGAATA+GGG	0.407407	3:+78117369	None:intergenic
CATGCACATTTGATCCTTGA+AGG	0.408025	3:+78117171	None:intergenic
GAAACCAAATTTGAGATTGA+AGG	0.423550	3:+78117245	None:intergenic
ACAAGGTTGGTTCTAAGCTT+AGG	0.427431	3:-78117287	MsG0380016027.01.T01:CDS
ATCCAAATCCATGGGAGAAT+AGG	0.427751	3:+78117368	None:intergenic
GGTAGCATCACATGAGCAAT+GGG	0.433096	3:+78116825	None:intergenic
AATACCTTATTATTGATGAT+GGG	0.459464	3:+78117144	None:intergenic
CATTTGATCCTTGAAGGTGT+TGG	0.463929	3:+78117177	None:intergenic
CTACCAATGTCTTTCAAAGA+TGG	0.465367	3:-78116807	MsG0380016027.01.T01:CDS
AGCTCCTAAGCCAATGTCAT+AGG	0.476044	3:+78117323	None:intergenic
TCCATGGGAGAATAGGGTCT+TGG	0.487632	3:+78117375	None:intergenic
AATCATAAGCAGAGTTATCT+GGG	0.497222	3:+78117436	None:intergenic
AATAGGGTCTTGGAACCAAA+GGG	0.508609	3:+78117385	None:intergenic
CTCTCCTATGACATTGGCTT+AGG	0.509647	3:-78117327	MsG0380016027.01.T01:CDS
AAGAAACTCTCCTATGACAT+TGG	0.513119	3:-78117333	MsG0380016027.01.T01:CDS
TGTTCTTCTTCTGCTTCTTG+TGG	0.515281	3:+78117540	None:intergenic
TCTCCATCTTTGAAAGACAT+TGG	0.535368	3:+78116804	None:intergenic
ATACCTTATTATTGATGATG+GGG	0.543732	3:+78117145	None:intergenic
TGGTAGCATCACATGAGCAA+TGG	0.550773	3:+78116824	None:intergenic
TTTGTAGTGTTCAGTAACAA+TGG	0.553446	3:+78117510	None:intergenic
AGATGCAGTGTCAACAAGGT+TGG	0.554476	3:-78117300	MsG0380016027.01.T01:CDS
ATGTGATACAGAGATGGGGC+AGG	0.556775	3:-78116899	MsG0380016027.01.T01:intron
TTTGATCCTTGAAGGTGTTG+GGG	0.561529	3:+78117179	None:intergenic
TCCAAGACCCTATTCTCCCA+TGG	0.565449	3:-78117376	MsG0380016027.01.T01:CDS
AGTAATGAGATCCAAATCCA+TGG	0.566074	3:+78117359	None:intergenic
GAATAGGGTCTTGGAACCAA+AGG	0.567058	3:+78117384	None:intergenic
CTTCAAAACAGTTCAAGAGA+TGG	0.567072	3:-78116863	MsG0380016027.01.T01:CDS
AGCTAGATGCAGTGTCAACA+AGG	0.580501	3:-78117304	MsG0380016027.01.T01:CDS
AGAAGCTCTAGTGACATGAA+TGG	0.598657	3:+78117468	None:intergenic
AAAACAGTTCAAGAGATGGA+AGG	0.606838	3:-78116859	MsG0380016027.01.T01:CDS
GTAATGAGATCCAAATCCAT+GGG	0.641690	3:+78117360	None:intergenic
TGTGATACAGAGATGGGGCA+GGG	0.647718	3:-78116898	MsG0380016027.01.T01:intron
TACTATGTGATACAGAGATG+GGG	0.699067	3:-78116903	MsG0380016027.01.T01:intron
ATAGGGTCTTGGAACCAAAG+GGG	0.746078	3:+78117386	None:intergenic
GTAGCATCACATGAGCAATG+GGG	0.782689	3:+78116826	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTTTTTTTTTTTAAACTCTT+TGG	-	Chr3:78117329-78117348	MsG0380016027.01.T01:CDS	10.0%
!!	AAATACCTTATTATTGATGA+TGG	+	Chr3:78117215-78117234	None:intergenic	20.0%
!!	GATGAAATTGAAGTAATTAT+TGG	-	Chr3:78117412-78117431	MsG0380016027.01.T01:CDS	20.0%
!!!	AATACCTTATTATTGATGAT+GGG	+	Chr3:78117214-78117233	None:intergenic	20.0%
!	AATTCCTTCAATCTCAAATT+TGG	-	Chr3:78117106-78117125	MsG0380016027.01.T01:intron	25.0%
!!	AATTATTGGTGATAACTTGT+GGG	-	Chr3:78117426-78117445	MsG0380016027.01.T01:CDS	25.0%
!!	CTGTTCTGTTTTATGATATT+GGG	-	Chr3:78117285-78117304	MsG0380016027.01.T01:CDS	25.0%
!!	TAATTATTGGTGATAACTTG+TGG	-	Chr3:78117425-78117444	MsG0380016027.01.T01:CDS	25.0%
!!	TCTGTTCTGTTTTATGATAT+TGG	-	Chr3:78117284-78117303	MsG0380016027.01.T01:CDS	25.0%
!!!	ATACCTTATTATTGATGATG+GGG	+	Chr3:78117213-78117232	None:intergenic	25.0%
	AAATCATAAGCAGAGTTATC+TGG	+	Chr3:78116923-78116942	None:intergenic	30.0%
	AATCATAAGCAGAGTTATCT+GGG	+	Chr3:78116922-78116941	None:intergenic	30.0%
	TAACCCCATCATCAATAATA+AGG	-	Chr3:78117207-78117226	MsG0380016027.01.T01:CDS	30.0%
	TTTGTAGTGTTCAGTAACAA+TGG	+	Chr3:78116848-78116867	None:intergenic	30.0%
!	GAAACCAAATTTGAGATTGA+AGG	+	Chr3:78117113-78117132	None:intergenic	30.0%
	AAAACAGTTCAAGAGATGGA+AGG	-	Chr3:78117496-78117515	MsG0380016027.01.T01:CDS	35.0%
	AAGAAACTCTCCTATGACAT+TGG	-	Chr3:78117022-78117041	MsG0380016027.01.T01:intron	35.0%
	AGTAATGAGATCCAAATCCA+TGG	+	Chr3:78116999-78117018	None:intergenic	35.0%
	ATGTCATAGGAGAGTTTCTT+TGG	+	Chr3:78117022-78117041	None:intergenic	35.0%
	CTACCAATGTCTTTCAAAGA+TGG	-	Chr3:78117548-78117567	MsG0380016027.01.T01:CDS	35.0%
	CTACTATGTGATACAGAGAT+GGG	-	Chr3:78117451-78117470	MsG0380016027.01.T01:CDS	35.0%
	CTTCAAAACAGTTCAAGAGA+TGG	-	Chr3:78117492-78117511	MsG0380016027.01.T01:CDS	35.0%
	GTAATGAGATCCAAATCCAT+GGG	+	Chr3:78116998-78117017	None:intergenic	35.0%
	TACTATGTGATACAGAGATG+GGG	-	Chr3:78117452-78117471	MsG0380016027.01.T01:CDS	35.0%
!	ACTACTCTCAAAGCACTATT+TGG	-	Chr3:78116945-78116964	MsG0380016027.01.T01:intron	35.0%
!	TCTCCATCTTTGAAAGACAT+TGG	+	Chr3:78117554-78117573	None:intergenic	35.0%
!!	ATTTGATCCTTGAAGGTGTT+GGG	+	Chr3:78117180-78117199	None:intergenic	35.0%
	AATAGGGTCTTGGAACCAAA+GGG	+	Chr3:78116973-78116992	None:intergenic	40.0%
	ATCCAAATCCATGGGAGAAT+AGG	+	Chr3:78116990-78117009	None:intergenic	40.0%
	CATGCACATTTGATCCTTGA+AGG	+	Chr3:78117187-78117206	None:intergenic	40.0%
	GCTACTATGTGATACAGAGA+TGG	-	Chr3:78117450-78117469	MsG0380016027.01.T01:CDS	40.0%
	TCCAAATCCATGGGAGAATA+GGG	+	Chr3:78116989-78117008	None:intergenic	40.0%
	TGTTCTTCTTCTGCTTCTTG+TGG	+	Chr3:78116818-78116837	None:intergenic	40.0%
!	AGAAGCTCTAGTGACATGAA+TGG	+	Chr3:78116890-78116909	None:intergenic	40.0%
!	CATTTGATCCTTGAAGGTGT+TGG	+	Chr3:78117181-78117200	None:intergenic	40.0%
!!	ACAAGGTTGGTTCTAAGCTT+AGG	-	Chr3:78117068-78117087	MsG0380016027.01.T01:intron	40.0%
!!	TTTGATCCTTGAAGGTGTTG+GGG	+	Chr3:78117179-78117198	None:intergenic	40.0%
	AAGCACTATTTGGTCCCCTT+TGG	-	Chr3:78116955-78116974	MsG0380016027.01.T01:intron	45.0%
	ACCCTATTCTCCCATGGATT+TGG	-	Chr3:78116985-78117004	MsG0380016027.01.T01:intron	45.0%
	AGATGCAGTGTCAACAAGGT+TGG	-	Chr3:78117055-78117074	MsG0380016027.01.T01:intron	45.0%
	AGCTAGATGCAGTGTCAACA+AGG	-	Chr3:78117051-78117070	MsG0380016027.01.T01:intron	45.0%
	AGCTCCTAAGCCAATGTCAT+AGG	+	Chr3:78117035-78117054	None:intergenic	45.0%
	ATAGGGTCTTGGAACCAAAG+GGG	+	Chr3:78116972-78116991	None:intergenic	45.0%
	ATTTCTCCCCAACACCTTCA+AGG	-	Chr3:78117170-78117189	MsG0380016027.01.T01:CDS	45.0%
	GAATAGGGTCTTGGAACCAA+AGG	+	Chr3:78116974-78116993	None:intergenic	45.0%
	GGTAGCATCACATGAGCAAT+GGG	+	Chr3:78117533-78117552	None:intergenic	45.0%
	GTAGCATCACATGAGCAATG+GGG	+	Chr3:78117532-78117551	None:intergenic	45.0%
	TGGTAGCATCACATGAGCAA+TGG	+	Chr3:78117534-78117553	None:intergenic	45.0%
!!	CTCTCCTATGACATTGGCTT+AGG	-	Chr3:78117028-78117047	MsG0380016027.01.T01:intron	45.0%
	ATGTGATACAGAGATGGGGC+AGG	-	Chr3:78117456-78117475	MsG0380016027.01.T01:CDS	50.0%
	TCCAAGACCCTATTCTCCCA+TGG	-	Chr3:78116979-78116998	MsG0380016027.01.T01:intron	50.0%
	TCCATGGGAGAATAGGGTCT+TGG	+	Chr3:78116983-78117002	None:intergenic	50.0%
	TGTGATACAGAGATGGGGCA+GGG	-	Chr3:78117457-78117476	MsG0380016027.01.T01:CDS	50.0%

Chromosome	Type	Strat	End	Strand	Name
Chr3	gene	78116797	78117580	78116797	ID=MsG0380016027.01;Name=MsG0380016027.01
Chr3	mRNA	78116797	78117580	78116797	ID=MsG0380016027.01.T01;Parent=MsG0380016027.01;Name=MsG0380016027.01.T01;_AED=0.50;_eAED=0.50;_QI=0\|0\|0\|1\|1\|1\|2\|0\|181
Chr3	exon	78117149	78117580	78117149	ID=MsG0380016027.01.T01:exon:18286;Parent=MsG0380016027.01.T01
Chr3	exon	78116797	78116910	78116797	ID=MsG0380016027.01.T01:exon:18285;Parent=MsG0380016027.01.T01
Chr3	CDS	78117149	78117580	78117149	ID=MsG0380016027.01.T01:cds;Parent=MsG0380016027.01.T01
Chr3	CDS	78116797	78116910	78116797	ID=MsG0380016027.01.T01:cds;Parent=MsG0380016027.01.T01

Gene Sequence

>MsG0380016027.01.T01

ATGAAATCTTTAGAAGAACCACAAGAAGCAGAAGAAGAACAACAACAACCATTGTTACTGAACACTACAAAAGTTGTTGAATATTTAGAACCATTCATGTCACTAGAGCTTCTCTGCAAATTCCCAGATAACTCTGCTTATGATTTTGACTACTCTCAAAGCACTATTTGGTCCCCTTTGGTTCCAAGACCCTATTCTCCCATGGATTTGGATCTCATTACTCCAAAGAAACTCTCCTATGACATTGGCTTAGGAGCTAGATGCAGTGTCAACAAGGTTGGTTCTAAGCTTAGGAAGAAGTTCACTTCTAATTCCTTCAATCTCAAATTTGGTTTCATTAAGAAACATAATAAGAACAACAAGATTGCTTCTGATTTCTCCCCAACACCTTCAAGGATCAAATGTGCATGTAACCCCATCATCAATAATAAGAGATGGGGCAGGGCATTGAAAGCTGCTTCAAAACAGTTCAAGAGATGGAAGGTGAAGAGAGACCCCATTGCTCATGTGATGCTACCAATGTCTTTCAAAGATGGAGATTTTTAA

Protein sequence

>MsG0380016027.01.T01

MKSLEEPQEAEEEQQQPLLLNTTKVVEYLEPFMSLELLCKFPDNSAYDFDYSQSTIWSPLVPRPYSPMDLDLITPKKLSYDIGLGARCSVNKVGSKLRKKFTSNSFNLKFGFIKKHNKNNKIASDFSPTPSRIKCACNPIINNKRWGRALKAASKQFKRWKVKRDPIAHVMLPMSFKDGDF*