AlfalfaGEDB | MsG0480021301.01

M. sativa cultivar ZhongmuNo.1 / MsG0480021301.01

KEGG: K11251
GO: GO:0000786 GO:0003677 GO:0005634 GO:0046982
PFAM: PF00125 PF16211

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480021301.01.T01	XP_003607007.1	98.026	152	1	1	1	150	1	152	8.41E-97	285

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480021301.01.T01	Q1S053	98.026	152	1	1	1	150	1	152	1.05E-99	285

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480021301.01.T01	G7JIM1	98.026	152	1	1	1	150	1	152	4.02e-97	285

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080047815.01	MsG0480021301.01	0.834154	3.530519e-56	4.153835e-53
MsG0080048220.01	MsG0480021301.01	0.813146	2.967283e-51	1.922285e-48
MsG0080048258.01	MsG0480021301.01	0.810040	1.404374e-50	8.377943e-48
MsG0080048775.01	MsG0480021301.01	0.848247	6.921356e-60	1.262281e-56
MsG0080048781.01	MsG0480021301.01	0.833640	4.749285e-56	5.502225e-53
MsG0080048797.01	MsG0480021301.01	0.817349	3.453800e-52	2.509063e-49
MsG0180000718.01	MsG0480021301.01	0.808298	3.317394e-50	1.889868e-47
MsG0180001293.01	MsG0480021301.01	0.862863	3.750241e-64	1.114757e-60
MsG0180001588.01	MsG0480021301.01	0.820970	5.175888e-53	4.156835e-50
MsG0180001719.01	MsG0480021301.01	0.826800	2.223900e-54	2.107248e-51
MsG0180002134.01	MsG0480021301.01	0.825704	4.054827e-54	3.724080e-51
MsG0180002217.01	MsG0480021301.01	0.811597	6.465242e-51	4.018646e-48
MsG0180002218.01	MsG0480021301.01	0.863169	3.015725e-64	9.056653e-61
MsG0180002397.01	MsG0480021301.01	0.866743	2.280734e-65	7.771297e-62
MsG0180002428.01	MsG0480021301.01	0.824331	8.553286e-54	7.552551e-51
MsG0180002583.01	MsG0480021301.01	0.801435	9.015998e-49	4.305389e-46
MsG0180003421.01	MsG0480021301.01	0.852006	6.126000e-61	1.262386e-57
MsG0180003658.01	MsG0480021301.01	0.820520	6.567718e-53	5.208265e-50
MsG0180003698.01	MsG0480021301.01	0.822736	2.019162e-53	1.704538e-50
MsG0180003857.01	MsG0480021301.01	0.887325	1.576067e-72	1.166627e-68
MsG0180003905.01	MsG0480021301.01	0.830399	3.002592e-55	3.159763e-52
MsG0180004120.01	MsG0480021301.01	0.916300	2.101770e-85	5.743392e-81
MsG0180004126.01	MsG0480021301.01	0.801677	8.044009e-49	3.864656e-46
MsG0180004185.01	MsG0480021301.01	0.858560	7.576704e-63	1.941476e-59
MsG0180004299.01	MsG0480021301.01	0.854492	1.187485e-61	2.656713e-58
MsG0180004471.01	MsG0480021301.01	0.837997	3.734560e-57	4.935636e-54
MsG0180004475.01	MsG0480021301.01	0.836893	7.165702e-57	9.155003e-54
MsG0180004538.01	MsG0480021301.01	0.902886	6.125014e-79	8.856837e-75
MsG0180004583.01	MsG0480021301.01	0.894415	2.520729e-75	2.503266e-71
MsG0180004835.01	MsG0480021301.01	0.817378	3.401535e-52	2.473190e-49
MsG0180004972.01	MsG0480021301.01	0.810562	1.083880e-50	6.555023e-48
MsG0180004994.01	MsG0480021301.01	0.853083	3.020195e-61	6.448164e-58
MsG0180004995.01	MsG0480021301.01	0.875925	2.096673e-68	9.972965e-65
MsG0180005048.01	MsG0480021301.01	0.929738	4.513010e-93	2.561847e-88
MsG0180005655.01	MsG0480021301.01	0.829468	5.062656e-55	5.185902e-52
MsG0180005780.01	MsG0480021301.01	0.807493	4.919432e-50	2.744081e-47
MsG0180006062.01	MsG0480021301.01	0.848987	4.315638e-60	8.062662e-57
MsG0180006133.01	MsG0480021301.01	0.909234	7.131885e-82	1.373927e-77
MsG0280006378.01	MsG0480021301.01	0.811158	8.051102e-51	4.946888e-48
MsG0280010579.01	MsG0480021301.01	0.818054	2.394732e-52	1.773594e-49
MsG0380012118.01	MsG0480021301.01	0.816355	5.771904e-52	4.080721e-49
MsG0380012956.01	MsG0480021301.01	0.858026	1.092673e-62	2.750576e-59
MsG0380013584.01	MsG0480021301.01	0.816373	5.717877e-52	4.044430e-49
MsG0380014542.01	MsG0480021301.01	0.856278	3.585134e-62	8.510654e-59
MsG0380014544.01	MsG0480021301.01	0.809683	1.675865e-50	9.904134e-48
MsG0380014666.01	MsG0480021301.01	0.920003	2.215910e-87	7.333803e-83
MsG0380014751.01	MsG0480021301.01	0.802117	6.533120e-49	3.174087e-46
MsG0480018785.01	MsG0480021301.01	0.849647	2.827453e-60	5.396275e-57
MsG0480020398.01	MsG0480021301.01	0.907982	2.809161e-81	5.106270e-77
MsG0480020856.01	MsG0480021301.01	0.865518	5.573045e-65	1.818391e-61
MsG0480020920.01	MsG0480021301.01	0.845086	5.058087e-59	8.334792e-56
MsG0480020921.01	MsG0480021301.01	0.917096	8.042922e-86	2.281577e-81
MsG0480020926.01	MsG0480021301.01	0.912775	1.322898e-83	3.025848e-79
MsG0480020937.01	MsG0480021301.01	0.826784	2.243237e-54	2.124564e-51
MsG0480020969.01	MsG0480021301.01	0.850807	1.337027e-60	2.651045e-57
MsG0480020970.01	MsG0480021301.01	0.910829	1.208198e-82	2.514284e-78
MsG0480020971.01	MsG0480021301.01	0.849371	3.374620e-60	6.383961e-57
MsG0480021015.01	MsG0480021301.01	0.894420	2.508744e-75	2.491873e-71
MsG0480021016.01	MsG0480021301.01	0.885496	7.732157e-72	5.319193e-68
MsG0480021048.01	MsG0480021301.01	0.892916	1.020665e-74	9.517796e-71
MsG0480021100.01	MsG0480021301.01	0.903525	3.171663e-79	4.712455e-75
MsG0480021252.01	MsG0480021301.01	0.809347	1.978996e-50	1.159162e-47
MsG0480021301.01	MsG0480021302.01	0.837504	5.000479e-57	6.509139e-54
MsG0480021301.01	MsG0480021456.01	0.817059	4.012967e-52	2.892369e-49
MsG0480021301.01	MsG0480021704.01	0.861951	7.150451e-64	2.058669e-60
MsG0480021301.01	MsG0480021773.01	0.877128	8.056504e-69	4.006080e-65
MsG0480021301.01	MsG0480021902.01	0.883653	3.739311e-71	2.392214e-67
MsG0480021301.01	MsG0480022307.01	0.927634	8.938015e-92	4.505642e-87
MsG0480021301.01	MsG0480022320.01	0.835369	1.746351e-56	2.131266e-53
MsG0480021301.01	MsG0480022378.01	0.804435	2.162960e-49	1.115125e-46
MsG0480021301.01	MsG0480022559.01	0.820595	6.311493e-53	5.015334e-50
MsG0480021301.01	MsG0480022682.01	0.805791	1.125784e-49	6.010438e-47
MsG0480021301.01	MsG0480022784.01	0.882649	8.727295e-71	5.357838e-67
MsG0480021301.01	MsG0480022982.01	0.802629	5.123192e-49	2.521829e-46
MsG0480021301.01	MsG0480022991.01	0.839803	1.273742e-57	1.778865e-54
MsG0480021301.01	MsG0480023003.01	0.877290	7.074567e-69	3.538676e-65
MsG0480021301.01	MsG0480023414.01	0.834108	3.626260e-56	4.260926e-53
MsG0480021301.01	MsG0480023424.01	0.910686	1.418232e-82	2.931090e-78
MsG0480021301.01	MsG0480023426.01	0.929353	7.847004e-93	4.357985e-88
MsG0480021301.01	MsG0480023428.01	0.842458	2.553961e-58	3.875193e-55
MsG0480021301.01	MsG0480023626.01	0.807688	4.472166e-50	2.507151e-47
MsG0480021301.01	MsG0480023653.01	0.863689	2.080465e-64	6.363153e-61
MsG0480021301.01	MsG0480023679.01	0.834027	3.800463e-56	4.454716e-53
MsG0480021301.01	MsG0480023706.01	0.904002	1.933555e-79	2.931498e-75
MsG0480021301.01	MsG0480023842.01	0.872207	3.798005e-67	1.575593e-63
MsG0480021301.01	MsG0480023913.01	0.803717	3.050873e-49	1.544120e-46
MsG0480021301.01	MsG0480024002.01	0.857878	1.208937e-62	3.028010e-59
MsG0480021301.01	MsG0480024019.01	0.834205	3.429313e-56	4.040950e-53
MsG0480021301.01	MsG0580024158.01	0.843204	1.617920e-58	2.512555e-55
MsG0480021301.01	MsG0580024276.01	0.869059	4.110998e-66	1.521361e-62
MsG0480021301.01	MsG0580024657.01	0.809769	1.606689e-50	9.517110e-48
MsG0480021301.01	MsG0580024742.01	0.850747	1.390111e-60	2.750684e-57
MsG0480021301.01	MsG0580024787.01	0.890191	1.231307e-73	1.024698e-69
MsG0480021301.01	MsG0580024954.01	0.825770	3.910313e-54	3.598179e-51
MsG0480021301.01	MsG0580025177.01	0.883436	4.495985e-71	2.849612e-67
MsG0480021301.01	MsG0580025186.01	0.837985	3.762617e-57	4.970871e-54
MsG0480021301.01	MsG0580025203.01	0.831373	1.732306e-55	1.876226e-52
MsG0480021301.01	MsG0580025504.01	0.924422	7.196581e-90	3.037269e-85
MsG0480021301.01	MsG0580025506.01	0.863291	2.765314e-64	8.340999e-61
MsG0480021301.01	MsG0580025526.01	0.801266	9.766788e-49	4.644045e-46
MsG0480021301.01	MsG0580026343.01	0.846204	2.515615e-59	4.296805e-56
MsG0480021301.01	MsG0580028633.01	0.804326	2.279832e-49	1.172087e-46
MsG0480021301.01	MsG0580028756.01	0.801734	7.830970e-49	3.767709e-46
MsG0480021301.01	MsG0580028927.01	0.882651	8.709273e-71	5.347305e-67
MsG0480021301.01	MsG0580028955.01	0.940995	8.966126e-101	1.017429e-95
MsG0480021301.01	MsG0580029261.01	0.823379	1.430033e-53	1.229115e-50
MsG0480021301.01	MsG0580029591.01	0.875217	3.667421e-68	1.698953e-64
MsG0480021301.01	MsG0680031006.01	0.809211	2.116447e-50	1.235171e-47
MsG0480021301.01	MsG0680031407.01	0.815435	9.256607e-52	6.381635e-49
MsG0480021301.01	MsG0680035350.01	0.830294	3.184423e-55	3.341022e-52
MsG0480021301.01	MsG0680035776.01	0.885945	5.246321e-72	3.672546e-68
MsG0480021301.01	MsG0680035792.01	0.870015	2.007011e-66	7.689438e-63
MsG0480021301.01	MsG0780036534.01	0.894573	2.171867e-75	2.171252e-71
MsG0480021301.01	MsG0780037741.01	0.833156	6.271071e-56	7.161292e-53
MsG0480021301.01	MsG0780038393.01	0.815380	9.523375e-52	6.555415e-49
MsG0480021301.01	MsG0780038402.01	0.826417	2.744676e-54	2.572561e-51
MsG0480021301.01	MsG0780038445.01	0.827090	1.895331e-54	1.811253e-51
MsG0480021301.01	MsG0780038642.01	0.824978	6.022203e-54	5.417960e-51
MsG0480021301.01	MsG0780038736.01	0.873818	1.095050e-67	4.817636e-64
MsG0480021301.01	MsG0780039861.01	0.831310	1.795123e-55	1.940576e-52
MsG0480021301.01	MsG0780040364.01	0.832881	7.337393e-56	8.310181e-53
MsG0480021301.01	MsG0780040474.01	0.802592	5.215083e-49	2.564684e-46
MsG0480021301.01	MsG0780040620.01	0.905292	5.005808e-80	8.042459e-76
MsG0480021301.01	MsG0780040641.01	0.894594	2.129962e-75	2.131553e-71
MsG0480021301.01	MsG0780040671.01	0.838250	3.215814e-57	4.282131e-54
MsG0480021301.01	MsG0780040899.01	0.877675	5.195602e-69	2.635473e-65
MsG0480021301.01	MsG0780040978.01	0.825605	4.278962e-54	3.918847e-51
MsG0480021301.01	MsG0780040990.01	0.807404	5.139476e-50	2.860146e-47
MsG0480021301.01	MsG0780041008.01	0.820917	5.322775e-53	4.268222e-50
MsG0480021301.01	MsG0780041142.01	0.829726	4.381191e-55	4.522306e-52
MsG0480021301.01	MsG0780041143.01	0.819788	9.664054e-53	7.509965e-50
MsG0480021301.01	MsG0780041219.01	0.821709	3.495880e-53	2.865875e-50
MsG0480021301.01	MsG0780041232.01	0.809175	2.154762e-50	1.256294e-47
MsG0480021301.01	MsG0780041273.01	0.939007	2.615716e-99	2.619675e-94
MsG0480021301.01	MsG0780041340.01	0.821656	3.596162e-53	2.943599e-50
MsG0480021301.01	MsG0780041359.01	0.886140	4.430658e-72	3.126676e-68
MsG0480021301.01	MsG0780041546.01	0.879242	1.462036e-69	7.869612e-66
MsG0480021301.01	MsG0780041660.01	0.805010	1.641121e-49	8.587256e-47
MsG0480021301.01	MsG0880041930.01	0.816303	5.928502e-52	4.185576e-49
MsG0480021301.01	MsG0880042833.01	0.812033	5.197352e-51	3.268351e-48
MsG0480021301.01	MsG0880043684.01	0.835991	1.215320e-56	1.511093e-53
MsG0480021301.01	MsG0880043714.01	0.828331	9.540345e-55	9.452850e-52
MsG0480021301.01	MsG0880043752.01	0.840195	1.006551e-57	1.423048e-54
MsG0480021301.01	MsG0880044103.01	0.859696	3.460583e-63	9.220276e-60
MsG0480021301.01	MsG0880044437.01	0.873351	1.572448e-67	6.802809e-64
MsG0480021301.01	MsG0880045015.01	0.925553	1.568761e-90	7.035800e-86
MsG0480021301.01	MsG0880045356.01	0.825441	4.680621e-54	4.266328e-51
MsG0480021301.01	MsG0880045584.01	0.817175	3.778573e-52	2.731999e-49
MsG0480021301.01	MsG0880045612.01	0.874635	5.787858e-68	2.624615e-64
MsG0480021301.01	MsG0880045647.01	0.895873	6.334723e-76	6.688387e-72
MsG0480021301.01	MsG0880045879.01	0.821010	5.068025e-53	4.074840e-50
MsG0480021301.01	MsG0880046431.01	0.826266	2.980339e-54	2.781373e-51
MsG0480021301.01	MsG0880046529.01	0.808146	3.574957e-50	2.028468e-47
MsG0480021301.01	MsG0880046904.01	0.894660	2.000948e-75	2.008178e-71
MsG0480021301.01	MsG0880046905.01	0.880383	5.745308e-70	3.230298e-66
MsG0480021301.01	MsG0880046906.01	0.848206	7.106526e-60	1.294260e-56
MsG0480021301.01	MsG0880047649.01	0.880358	5.860478e-70	3.291949e-66
MsG0380015090.01	MsG0480021301.01	0.861924	7.289110e-64	2.096362e-60
MsG0380015219.01	MsG0480021301.01	0.867416	1.391227e-65	4.853614e-62
MsG0380015234.01	MsG0480021301.01	0.812244	4.674040e-51	2.956457e-48
MsG0380015340.01	MsG0480021301.01	0.858439	8.230294e-63	2.100585e-59
MsG0380015394.01	MsG0480021301.01	0.847443	1.153051e-59	2.049804e-56
MsG0380015402.01	MsG0480021301.01	0.839865	1.227228e-57	1.717118e-54
MsG0380015954.01	MsG0480021301.01	0.832653	8.358872e-56	9.403360e-53
MsG0380016027.01	MsG0480021301.01	0.871738	5.436396e-67	2.216937e-63
MsG0380016091.01	MsG0480021301.01	0.861189	1.222192e-63	3.428600e-60
MsG0380016092.01	MsG0480021301.01	0.820933	5.278443e-53	4.234591e-50
MsG0380016217.01	MsG0480021301.01	0.869216	3.657104e-66	1.361518e-62
MsG0380016225.01	MsG0480021301.01	0.866416	2.897863e-65	9.759279e-62
MsG0380017128.01	MsG0480021301.01	0.837109	6.311154e-57	8.115565e-54
MsG0380017180.01	MsG0480021301.01	0.814051	1.876032e-51	1.245632e-48
MsG0380017181.01	MsG0480021301.01	0.839958	1.160508e-57	1.628726e-54
MsG0380017282.01	MsG0480021301.01	0.847546	1.079791e-59	1.926076e-56
MsG0380017332.01	MsG0480021301.01	0.888867	4.033188e-73	3.179719e-69
MsG0380017440.01	MsG0480021301.01	0.810978	8.808234e-51	5.387192e-48
MsG0380017588.01	MsG0480021301.01	0.854838	9.426822e-62	2.133473e-58
MsG0380017605.01	MsG0480021301.01	0.889950	1.529974e-73	1.260948e-69
MsG0380017632.01	MsG0480021301.01	0.853535	2.241335e-61	4.858588e-58
MsG0380017696.01	MsG0480021301.01	0.868000	9.035024e-66	3.217004e-62
MsG0380017932.01	MsG0480021301.01	0.862715	4.162915e-64	1.231025e-60
MsG0380018055.01	MsG0480021301.01	0.825204	5.326153e-54	4.822567e-51
MsG0480018106.01	MsG0480021301.01	0.804811	1.805591e-49	9.400465e-47
MsG0480018228.01	MsG0480021301.01	0.877353	6.726883e-69	3.372234e-65
MsG0280006563.01	MsG0480021301.01	0.855100	7.909784e-62	1.805580e-58
MsG0280006717.01	MsG0480021301.01	0.815574	8.622409e-52	5.966960e-49
MsG0280007003.01	MsG0480021301.01	0.830224	3.313397e-55	3.469570e-52
MsG0280007431.01	MsG0480021301.01	0.803421	3.513745e-49	1.764994e-46
MsG0280007492.01	MsG0480021301.01	0.819895	9.133958e-53	7.119200e-50
MsG0280007919.01	MsG0480021301.01	0.906437	1.484603e-80	2.515074e-76
MsG0280009866.01	MsG0480021301.01	0.810806	9.597860e-51	5.842617e-48

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480021301.01.T01	MTR_4g071150	98.026	152	1	1	1	150	1	152	1.02e-100	285
MsG0480021301.01.T01	MTR_2g096610	87.333	150	17	1	1	150	1	148	4.59e-83	241
MsG0480021301.01.T01	MTR_4g064005	94.000	150	7	1	1	150	1	148	1.38e-82	239
MsG0480021301.01.T01	MTR_4g063410	94.000	150	7	1	1	150	1	148	2.81e-82	239
MsG0480021301.01.T01	MTR_2g096570	91.558	154	8	2	1	150	1	153	5.87e-82	238
MsG0480021301.01.T01	MTR_4g063280	92.424	132	9	1	20	150	14	145	2.96e-81	236
MsG0480021301.01.T01	MTR_4g064967	93.333	150	8	1	1	150	1	148	3.10e-80	234
MsG0480021301.01.T01	MTR_8g086640	96.212	132	5	0	1	132	1	132	4.44e-75	221
MsG0480021301.01.T01	MTR_7g113160	79.699	133	26	1	10	142	13	144	5.21e-71	210
MsG0480021301.01.T01	MTR_7g108320	75.000	128	26	3	4	130	6	128	7.88e-60	182
MsG0480021301.01.T01	MTR_7g114060	74.219	128	29	1	3	130	2	125	8.16e-60	182
MsG0480021301.01.T01	MTR_7g114040	74.219	128	29	1	3	130	2	125	8.16e-60	182
MsG0480021301.01.T01	MTR_7g093910	73.228	127	31	1	4	130	5	128	9.70e-60	181
MsG0480021301.01.T01	MTR_2g082510	70.543	129	38	0	11	139	3	131	3.33e-59	180
MsG0480021301.01.T01	MTR_2g082220	73.950	119	31	0	11	129	3	121	1.72e-57	176
MsG0480021301.01.T01	MTR_6g005150	62.992	127	33	3	24	149	26	139	3.28e-47	150
MsG0480021301.01.T01	MTR_4g063300	75.238	105	21	1	45	149	10	109	3.46e-46	146
MsG0480021301.01.T01	MTR_7g114050	68.644	118	22	3	17	130	10	116	2.27e-45	145
MsG0480021301.01.T01	MTR_1g011750	60.714	112	42	2	21	131	23	133	3.72e-36	121
MsG0480021301.01.T01	MTR_1g011850	60.714	112	42	2	21	131	23	133	3.72e-36	121
MsG0480021301.01.T01	MTR_1g114050	60.550	109	41	2	21	128	20	127	3.01e-35	119
MsG0480021301.01.T01	MTR_1g071040	62.500	104	37	2	26	128	28	130	1.59e-34	117
MsG0480021301.01.T01	MTR_1g069770	48.958	96	48	1	45	139	9	104	5.82e-25	92.4
MsG0480021301.01.T01	MTR_4g048490	44.762	105	29	2	24	128	26	101	1.75e-16	70.9
MsG0480021301.01.T01	MTR_7g010440	70.588	51	15	0	78	128	122	172	2.30e-16	74.3
MsG0480021301.01.T01	MTR_4g005910	74.419	43	11	0	87	129	4	46	3.30e-16	68.6
MsG0480021301.01.T01	MTR_7g027610	41.525	118	42	4	20	135	10	102	5.78e-15	67.0
MsG0480021301.01.T01	MTR_0653s0030	54.545	55	25	0	55	109	43	97	4.70e-12	60.5
MsG0480021301.01.T01	MTR_2g096590	70.000	40	12	0	110	149	12	51	5.47e-12	57.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480021301.01.T01	AT5G02560	79.739	153	28	1	1	150	1	153	1.54e-77	227
MsG0480021301.01.T01	AT5G27670	76.316	152	32	3	1	150	1	150	3.46e-74	218
MsG0480021301.01.T01	AT5G02560	68.927	177	28	2	1	150	1	177	1.10e-72	216
MsG0480021301.01.T01	AT5G59870	75.000	148	36	1	4	150	3	150	9.34e-72	212
MsG0480021301.01.T01	AT1G51060	76.667	120	28	0	11	130	3	122	9.51e-61	184
MsG0480021301.01.T01	AT4G27230	71.538	130	32	1	11	140	3	127	1.49e-59	181
MsG0480021301.01.T01	AT4G27230	71.538	130	32	1	11	140	3	127	1.49e-59	181
MsG0480021301.01.T01	AT3G20670	75.630	119	29	0	11	129	3	121	4.96e-59	179
MsG0480021301.01.T01	AT1G08880	71.654	127	33	1	7	130	2	128	3.60e-58	177
MsG0480021301.01.T01	AT5G54640	74.790	119	30	0	11	129	3	121	4.69e-58	177
MsG0480021301.01.T01	AT1G54690	72.868	129	29	3	3	130	5	128	1.24e-57	176
MsG0480021301.01.T01	AT2G38810	60.714	112	42	2	21	131	25	135	7.22e-37	123
MsG0480021301.01.T01	AT2G38810	60.714	112	42	2	21	131	25	135	7.22e-37	123
MsG0480021301.01.T01	AT2G38810	60.714	112	42	2	21	131	25	135	7.22e-37	123
MsG0480021301.01.T01	AT2G38810	60.714	112	42	2	21	131	25	135	7.22e-37	123
MsG0480021301.01.T01	AT1G52740	62.857	105	37	2	25	128	27	130	6.40e-35	118
MsG0480021301.01.T01	AT3G54560	60.185	108	41	2	25	131	29	135	1.29e-34	118
MsG0480021301.01.T01	AT3G54560	60.185	108	41	2	25	131	29	135	1.29e-34	118
MsG0480021301.01.T01	AT4G13570	48.913	92	45	2	32	122	28	118	2.04e-20	81.3
MsG0480021301.01.T01	AT4G13570	48.352	91	45	2	33	122	35	124	5.83e-20	80.1

Find 56 sgRNAs with CRISPR-Local

Find 55 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GGAGACTTTCCAGCCTTCTT+TGG	0.241789	4:-56478996	None:intergenic
AATCAGATCTAAGCCTTCTT+TGG	0.242120	4:-56479017	None:intergenic
GTCTTCTTAGGCAACAGAAT+TGG	0.279189	4:-56478945	None:intergenic
TTAGCCCTTTCAGTCTTCTT+AGG	0.279305	4:-56478957	None:intergenic
CGATTCTTCCGACTGGGAAT+TGG	0.285182	4:-56478677	None:intergenic
CATTCCAAGGCATTTGTTGC+TGG	0.294047	4:+56478842	MsG0480021301.01.T01:CDS
CTTGTCACCGACTTCTTCCT+TGG	0.303917	4:-56478636	None:intergenic
GGCTCCCTTCTTTGTTGTCT+TGG	0.304409	4:-56478592	None:intergenic
GAGCATATCTACCTTTCTTC+AGG	0.354180	4:-56478707	None:intergenic
TGCTGCTGAGGTTCTTGAAT+TGG	0.361111	4:+56478782	MsG0480021301.01.T01:CDS
GAGCTTGGGAAGTTGCTTGC+TGG	0.378028	4:+56478882	MsG0480021301.01.T01:CDS
GGCATTTGTTGCTGGCTGTT+AGG	0.378218	4:+56478850	MsG0480021301.01.T01:CDS
TCTTCTTAGGCAACAGAATT+GGG	0.398360	4:-56478944	None:intergenic
GAAGGGAGCCGGTGGAAGAA+AGG	0.417242	4:+56478605	MsG0480021301.01.T01:CDS
AACAGAATTGGGTTGATGTT+CGG	0.418504	4:-56478933	None:intergenic
AAGGGAGCCGGTGGAAGAAA+GGG	0.429527	4:+56478606	MsG0480021301.01.T01:CDS
CAATTCCCAGTCGGAAGAAT+CGG	0.431861	4:+56478678	MsG0480021301.01.T01:CDS
AGAACTGCTGCTAGGTAAAC+CGG	0.439504	4:-56478750	None:intergenic
ACCTCCTCCCTTTCTTCCAC+CGG	0.471747	4:-56478613	None:intergenic
GCGTGTCGGCACCGGTGCTC+CGG	0.486643	4:+56478731	MsG0480021301.01.T01:CDS
GAATTGGAGACCGGCTCTGA+TGG	0.486869	4:-56478661	None:intergenic
TCTTGAATATCTTGCTGCTG+AGG	0.496391	4:+56478770	MsG0480021301.01.T01:CDS
AAGCACCAAGACAACAAAGA+AGG	0.501816	4:+56478587	MsG0480021301.01.T01:CDS
TATGCTCAGCGTGTCGGCAC+CGG	0.502840	4:+56478723	MsG0480021301.01.T01:CDS
GTTAGGAATGATGAAGAGCT+TGG	0.506747	4:+56478867	MsG0480021301.01.T01:CDS
AGCAAGGAACCAAAGAAGGC+TGG	0.510603	4:+56478987	MsG0480021301.01.T01:CDS
GCTGAGGTTCTTGAATTGGC+AGG	0.519701	4:+56478786	MsG0480021301.01.T01:CDS
CTCGTGATAACAAGAAGAAT+AGG	0.522113	4:+56478817	MsG0480021301.01.T01:CDS
TTAGGAATGATGAAGAGCTT+GGG	0.524474	4:+56478868	MsG0480021301.01.T01:CDS
GGCTGGAAAGTCTCCAAAGA+AGG	0.525629	4:+56479004	MsG0480021301.01.T01:CDS
ACAGCCAGCAACAAATGCCT+TGG	0.526781	4:-56478846	None:intergenic
ATCGGTCGATACCTGAAGAA+AGG	0.532583	4:+56478696	MsG0480021301.01.T01:CDS
TGCTAGGTAAACCGGAGCAC+CGG	0.537567	4:-56478742	None:intergenic
TATCGACCGATTCTTCCGAC+TGG	0.549955	4:-56478684	None:intergenic
TGGTAGCAAGGAACCAAAGA+AGG	0.550474	4:+56478983	MsG0480021301.01.T01:CDS
TGTTGCCTAAGAAGACTGAA+AGG	0.556495	4:+56478952	MsG0480021301.01.T01:CDS
AGCACCAAGACAACAAAGAA+GGG	0.558080	4:+56478588	MsG0480021301.01.T01:CDS
GAAGAAAGGGAGGAGGTCCA+AGG	0.558674	4:+56478619	MsG0480021301.01.T01:CDS
TCCGACTGGGAATTGGAGAC+CGG	0.563841	4:-56478670	None:intergenic
AAGAACACCACCATGAGCTA+TGG	0.573393	4:-56478910	None:intergenic
AAGACAACAAAGAAGGGAGC+CGG	0.578427	4:+56478594	MsG0480021301.01.T01:CDS
GATATTCAAGAACTGCTGCT+AGG	0.583613	4:-56478758	None:intergenic
GCTGGTGTTACCATAGCTCA+TGG	0.586669	4:+56478900	MsG0480021301.01.T01:CDS
GTGACAAGATCCATCAGAGC+CGG	0.589197	4:+56478651	MsG0480021301.01.T01:CDS
GTTGCCTAAGAAGACTGAAA+GGG	0.589268	4:+56478953	MsG0480021301.01.T01:CDS
GCCGGTGGAAGAAAGGGAGG+AGG	0.593863	4:+56478612	MsG0480021301.01.T01:CDS
GGTAGATATGCTCAGCGTGT+CGG	0.594469	4:+56478717	MsG0480021301.01.T01:CDS
AAGGGCTAACACTGGTAGCA+AGG	0.594830	4:+56478971	MsG0480021301.01.T01:CDS
ACAACAAAGAAGGGAGCCGG+TGG	0.595449	4:+56478597	MsG0480021301.01.T01:CDS
GGAGCCGGTGGAAGAAAGGG+AGG	0.604037	4:+56478609	MsG0480021301.01.T01:CDS
ATCGACCGATTCTTCCGACT+GGG	0.613102	4:-56478683	None:intergenic
AGGAGGTCCAAGGAAGAAGT+CGG	0.620460	4:+56478629	MsG0480021301.01.T01:CDS
GCCGGTCTCCAATTCCCAGT+CGG	0.630576	4:+56478669	MsG0480021301.01.T01:CDS
AGAAGAATAGGATCATTCCA+AGG	0.652341	4:+56478829	MsG0480021301.01.T01:CDS
AAGACTGAAAGGGCTAACAC+TGG	0.665786	4:+56478963	MsG0480021301.01.T01:CDS
GGTGTTACCATAGCTCATGG+TGG	0.742529	4:+56478903	MsG0480021301.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
	AGAAGAATAGGATCATTCCA+AGG	+	Chr4:56478829-56478848	MsG0480021301.01.T01:CDS	35.0%
	CTCGTGATAACAAGAAGAAT+AGG	+	Chr4:56478817-56478836	MsG0480021301.01.T01:CDS	35.0%
	TCTTCTTAGGCAACAGAATT+GGG	-	Chr4:56478947-56478966	None:intergenic	35.0%
	TTAGGAATGATGAAGAGCTT+GGG	+	Chr4:56478868-56478887	MsG0480021301.01.T01:CDS	35.0%
!!	AACAGAATTGGGTTGATGTT+CGG	-	Chr4:56478936-56478955	None:intergenic	35.0%
	AAGCACCAAGACAACAAAGA+AGG	+	Chr4:56478587-56478606	MsG0480021301.01.T01:CDS	40.0%
	AGCACCAAGACAACAAAGAA+GGG	+	Chr4:56478588-56478607	MsG0480021301.01.T01:CDS	40.0%
	GAGCATATCTACCTTTCTTC+AGG	-	Chr4:56478710-56478729	None:intergenic	40.0%
	GATATTCAAGAACTGCTGCT+AGG	-	Chr4:56478761-56478780	None:intergenic	40.0%
	GTCTTCTTAGGCAACAGAAT+TGG	-	Chr4:56478948-56478967	None:intergenic	40.0%
	GTTAGGAATGATGAAGAGCT+TGG	+	Chr4:56478867-56478886	MsG0480021301.01.T01:CDS	40.0%
	GTTGCCTAAGAAGACTGAAA+GGG	+	Chr4:56478953-56478972	MsG0480021301.01.T01:CDS	40.0%
	TCTTGAATATCTTGCTGCTG+AGG	+	Chr4:56478770-56478789	MsG0480021301.01.T01:CDS	40.0%
	TGTTGCCTAAGAAGACTGAA+AGG	+	Chr4:56478952-56478971	MsG0480021301.01.T01:CDS	40.0%
	TTAGCCCTTTCAGTCTTCTT+AGG	-	Chr4:56478960-56478979	None:intergenic	40.0%
	AAGAACACCACCATGAGCTA+TGG	-	Chr4:56478913-56478932	None:intergenic	45.0%
	AAGACAACAAAGAAGGGAGC+CGG	+	Chr4:56478594-56478613	MsG0480021301.01.T01:CDS	45.0%
	AAGACTGAAAGGGCTAACAC+TGG	+	Chr4:56478963-56478982	MsG0480021301.01.T01:CDS	45.0%
	AGAACTGCTGCTAGGTAAAC+CGG	-	Chr4:56478753-56478772	None:intergenic	45.0%
	ATCGGTCGATACCTGAAGAA+AGG	+	Chr4:56478696-56478715	MsG0480021301.01.T01:CDS	45.0%
	CAATTCCCAGTCGGAAGAAT+CGG	+	Chr4:56478678-56478697	MsG0480021301.01.T01:CDS	45.0%
	TGCTGCTGAGGTTCTTGAAT+TGG	+	Chr4:56478782-56478801	MsG0480021301.01.T01:CDS	45.0%
	TGGTAGCAAGGAACCAAAGA+AGG	+	Chr4:56478983-56479002	MsG0480021301.01.T01:CDS	45.0%
!	CATTCCAAGGCATTTGTTGC+TGG	+	Chr4:56478842-56478861	MsG0480021301.01.T01:CDS	45.0%
	AAGGGCTAACACTGGTAGCA+AGG	+	Chr4:56478971-56478990	MsG0480021301.01.T01:CDS	50.0%
	ACAGCCAGCAACAAATGCCT+TGG	-	Chr4:56478849-56478868	None:intergenic	50.0%
	AGCAAGGAACCAAAGAAGGC+TGG	+	Chr4:56478987-56479006	MsG0480021301.01.T01:CDS	50.0%
	AGGAGGTCCAAGGAAGAAGT+CGG	+	Chr4:56478629-56478648	MsG0480021301.01.T01:CDS	50.0%
	CGATTCTTCCGACTGGGAAT+TGG	-	Chr4:56478680-56478699	None:intergenic	50.0%
	GCTGAGGTTCTTGAATTGGC+AGG	+	Chr4:56478786-56478805	MsG0480021301.01.T01:CDS	50.0%
	GGAGACTTTCCAGCCTTCTT+TGG	-	Chr4:56478999-56479018	None:intergenic	50.0%
	GGCTGGAAAGTCTCCAAAGA+AGG	+	Chr4:56479004-56479023	MsG0480021301.01.T01:CDS	50.0%
	GGTAGATATGCTCAGCGTGT+CGG	+	Chr4:56478717-56478736	MsG0480021301.01.T01:CDS	50.0%
	GTGACAAGATCCATCAGAGC+CGG	+	Chr4:56478651-56478670	MsG0480021301.01.T01:CDS	50.0%
!	ATCGACCGATTCTTCCGACT+GGG	-	Chr4:56478686-56478705	None:intergenic	50.0%
!	GGCATTTGTTGCTGGCTGTT+AGG	+	Chr4:56478850-56478869	MsG0480021301.01.T01:CDS	50.0%
!	GGCTCCCTTCTTTGTTGTCT+TGG	-	Chr4:56478595-56478614	None:intergenic	50.0%
!	GGTGTTACCATAGCTCATGG+TGG	+	Chr4:56478903-56478922	MsG0480021301.01.T01:CDS	50.0%
!	TATCGACCGATTCTTCCGAC+TGG	-	Chr4:56478687-56478706	None:intergenic	50.0%
!!	CTTGTCACCGACTTCTTCCT+TGG	-	Chr4:56478639-56478658	None:intergenic	50.0%
!!	GCTGGTGTTACCATAGCTCA+TGG	+	Chr4:56478900-56478919	MsG0480021301.01.T01:CDS	50.0%
	AAGGGAGCCGGTGGAAGAAA+GGG	+	Chr4:56478606-56478625	MsG0480021301.01.T01:CDS	55.0%
	ACAACAAAGAAGGGAGCCGG+TGG	+	Chr4:56478597-56478616	MsG0480021301.01.T01:CDS	55.0%
	ACCTCCTCCCTTTCTTCCAC+CGG	-	Chr4:56478616-56478635	None:intergenic	55.0%
	GAAGAAAGGGAGGAGGTCCA+AGG	+	Chr4:56478619-56478638	MsG0480021301.01.T01:CDS	55.0%
	GAGCTTGGGAAGTTGCTTGC+TGG	+	Chr4:56478882-56478901	MsG0480021301.01.T01:CDS	55.0%
	TCCGACTGGGAATTGGAGAC+CGG	-	Chr4:56478673-56478692	None:intergenic	55.0%
	TGCTAGGTAAACCGGAGCAC+CGG	-	Chr4:56478745-56478764	None:intergenic	55.0%
!	GAATTGGAGACCGGCTCTGA+TGG	-	Chr4:56478664-56478683	None:intergenic	55.0%
	GAAGGGAGCCGGTGGAAGAA+AGG	+	Chr4:56478605-56478624	MsG0480021301.01.T01:CDS	60.0%
	GCCGGTCTCCAATTCCCAGT+CGG	+	Chr4:56478669-56478688	MsG0480021301.01.T01:CDS	60.0%
!	TATGCTCAGCGTGTCGGCAC+CGG	+	Chr4:56478723-56478742	MsG0480021301.01.T01:CDS	60.0%
	GCCGGTGGAAGAAAGGGAGG+AGG	+	Chr4:56478612-56478631	MsG0480021301.01.T01:CDS	65.0%
	GGAGCCGGTGGAAGAAAGGG+AGG	+	Chr4:56478609-56478628	MsG0480021301.01.T01:CDS	65.0%
!!	GCGTGTCGGCACCGGTGCTC+CGG	+	Chr4:56478731-56478750	MsG0480021301.01.T01:CDS	75.0%

Chromosome	Type	Strat	End	Strand	Name
Chr4	gene	56478579	56479031	56478579	ID=MsG0480021301.01;Name=MsG0480021301.01
Chr4	mRNA	56478579	56479031	56478579	ID=MsG0480021301.01.T01;Parent=MsG0480021301.01;Name=MsG0480021301.01.T01;_AED=0.49;_eAED=0.49;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|150
Chr4	exon	56478579	56479031	56478579	ID=MsG0480021301.01.T01:exon:19062;Parent=MsG0480021301.01.T01
Chr4	CDS	56478579	56479031	56478579	ID=MsG0480021301.01.T01:cds;Parent=MsG0480021301.01.T01

Gene Sequence

>MsG0480021301.01.T01

ATGGACGCAAGCACCAAGACAACAAAGAAGGGAGCCGGTGGAAGAAAGGGAGGAGGTCCAAGGAAGAAGTCGGTGACAAGATCCATCAGAGCCGGTCTCCAATTCCCAGTCGGAAGAATCGGTCGATACCTGAAGAAAGGTAGATATGCTCAGCGTGTCGGCACCGGTGCTCCGGTTTACCTAGCAGCAGTTCTTGAATATCTTGCTGCTGAGGTTCTTGAATTGGCAGGAAACGCTGCTCGTGATAACAAGAAGAATAGGATCATTCCAAGGCATTTGTTGCTGGCTGTTAGGAATGATGAAGAGCTTGGGAAGTTGCTTGCTGGTGTTACCATAGCTCATGGTGGTGTTCTTCCGAACATCAACCCAATTCTGTTGCCTAAGAAGACTGAAAGGGCTAACACTGGTAGCAAGGAACCAAAGAAGGCTGGAAAGTCTCCAAAGAAGGCTTAG

Protein sequence

>MsG0480021301.01.T01

MDASTKTTKKGAGGRKGGGPRKKSVTRSIRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHLLLAVRNDEELGKLLAGVTIAHGGVLPNINPILLPKKTERANTGSKEPKKAGKSPKKA*