AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280008380.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280008380.01.T01 MTR_2g041270 86.170 658 41 6 1 639 1 627 0.0 1124
MsG0280008380.01.T01 MTR_3g047950 72.258 465 114 3 184 636 121 582 0.0 696
MsG0280008380.01.T01 MTR_4g109580 36.207 464 274 7 187 636 159 614 2.98e-93 300
MsG0280008380.01.T01 MTR_4g109580 38.500 400 224 7 187 572 159 550 1.88e-84 276
MsG0280008380.01.T01 MTR_4g109590 26.923 286 162 8 364 638 18 267 1.06e-22 98.6
MsG0280008380.01.T01 MTR_5g027390 24.932 369 230 15 218 568 23 362 3.27e-16 82.0
MsG0280008380.01.T01 MTR_4g070090 25.074 339 219 13 247 568 74 394 1.18e-15 80.5
MsG0280008380.01.T01 MTR_6g052340 28.708 209 135 8 235 433 42 246 1.75e-14 77.4
MsG0280008380.01.T01 MTR_5g078250 24.797 246 166 7 235 467 46 285 7.75e-12 68.6
MsG0280008380.01.T01 MTR_8g479260 19.895 382 260 14 206 568 20 374 1.84e-11 67.4
MsG0280008380.01.T01 MTR_4g036240 22.146 438 306 16 195 620 7 421 3.59e-11 66.6
MsG0280008380.01.T01 MTR_2g008650 19.634 382 261 14 206 568 20 374 5.45e-11 65.9
MsG0280008380.01.T01 MTR_6g039240 22.330 309 193 11 196 485 8 288 5.68e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280008380.01.T01 AT2G06510 63.053 655 207 6 1 635 1 640 0.0 814
MsG0280008380.01.T01 AT2G06510 68.440 564 162 4 73 635 69 617 0.0 795
MsG0280008380.01.T01 AT5G45400 61.684 475 177 4 165 637 270 741 0.0 640
MsG0280008380.01.T01 AT4G19130 47.807 684 297 12 1 637 2 672 0.0 625
MsG0280008380.01.T01 AT4G19130 47.807 684 297 12 1 637 1 671 0.0 625
MsG0280008380.01.T01 AT5G08020 37.931 464 265 8 187 635 144 599 3.11e-102 323
MsG0280008380.01.T01 AT5G61000 37.149 463 268 8 187 634 168 622 2.63e-92 298
MsG0280008380.01.T01 AT1G52950 22.045 440 294 14 196 610 10 425 9.47e-16 81.3

Find 183 sgRNAs with CRISPR-Local

Find 260 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAATTATTATTAATATTTC+TGG 0.129088 2:+30322981 None:intergenic
ACCAGCCTTTACTGCTAAAA+TGG 0.144775 2:+30322150 None:intergenic
CAGAAATATTAATAATAATT+TGG 0.171665 2:-30322980 MsG0280008380.01.T01:CDS
TGCAGTAACCCTTGCCTTGA+TGG 0.192465 2:+30322705 None:intergenic
GGAAGCAGGGGAGGAGATTA+TGG 0.234809 2:-30321663 MsG0280008380.01.T01:CDS
GATTTCACAATCAGGTATTA+TGG 0.235355 2:+30323083 None:intergenic
ATGCTATCCTTGATGTTATT+GGG 0.237693 2:-30322351 MsG0280008380.01.T01:CDS
GTAGTAATGGGCAGAATTTC+AGG 0.238903 2:-30322852 MsG0280008380.01.T01:CDS
GTAGTAATGGGCAGAATTTC+AGG 0.238903 2:-30322942 MsG0280008380.01.T01:CDS
AATGCTATCCTTGATGTTAT+TGG 0.260217 2:-30322352 MsG0280008380.01.T01:CDS
GAGTTGTATTTCTAAGAATT+AGG 0.278165 2:-30324762 MsG0280008380.01.T01:CDS
AGCTGCTTTAAATCCCTATC+AGG 0.291739 2:-30322737 MsG0280008380.01.T01:CDS
TTCCTTGTACAGGATTATTA+TGG 0.291986 2:-30323121 MsG0280008380.01.T01:intron
TGCTTCTCTATCCATTTCTA+AGG 0.293301 2:-30322005 MsG0280008380.01.T01:CDS
TTGAATCTAAAGGACAATTC+TGG 0.293961 2:-30322259 MsG0280008380.01.T01:CDS
AACTTGGGTAACTGCTTTCC+AGG 0.306558 2:-30321684 MsG0280008380.01.T01:CDS
TAATCTCCTCCCCTGCTTCC+TGG 0.309445 2:+30321666 None:intergenic
GAGTGTTGAGCTAACACTTT+GGG 0.310178 2:-30322233 MsG0280008380.01.T01:CDS
GTCTGAGCCTCAGGGAAATC+TGG 0.314113 2:+30322064 None:intergenic
GTTCTTAAGGTCTGAGCCTC+AGG 0.330109 2:+30322055 None:intergenic
TTGATCAAACCAGGTTCTTA+AGG 0.331128 2:+30322042 None:intergenic
GATGGCCCACCTACCCTGAT+AGG 0.333085 2:+30322723 None:intergenic
GCCCTCATTGTTATCCAGTC+TGG 0.338147 2:+30321899 None:intergenic
CAGGAGGATGATGAGAAGTT+TGG 0.346761 2:-30321602 MsG0280008380.01.T01:CDS
CAATCACTGCCTACGGAACT+TGG 0.351957 2:+30321424 None:intergenic
TATTTCTAAGAATTAGGATA+TGG 0.354443 2:-30324756 MsG0280008380.01.T01:CDS
TCAGGCAATGCTTTCTGAAC+TGG 0.362621 2:+30323024 None:intergenic
GGTATAGAACCATCCTCATC+TGG 0.367686 2:+30322427 None:intergenic
CTCAAAATGCTGGTAGTAAT+GGG 0.368189 2:-30322954 MsG0280008380.01.T01:CDS
TCAATCATTTGAAGAATGAA+TGG 0.372621 2:-30322489 MsG0280008380.01.T01:CDS
TGCCCATTACTACCAGCATT+TGG 0.378317 2:+30322862 None:intergenic
GCTCAAATCCAGGATCATTC+AGG 0.380015 2:-30321710 MsG0280008380.01.T01:CDS
TCTCACCGCAAACGCTATTC+CGG 0.381154 2:-30325508 MsG0280008380.01.T01:CDS
ACAGCTTGCCCTCTGATGAT+TGG 0.387057 2:-30321839 MsG0280008380.01.T01:CDS
GAACCAGCCACAGTGTTATC+AGG 0.387320 2:+30323006 None:intergenic
CAAATTAAAGATGAAGATCT+AGG 0.387556 2:-30321935 MsG0280008380.01.T01:CDS
GGGCAAGCTGTGTAACAAAA+TGG 0.387851 2:+30321851 None:intergenic
TTTGGGGTGAATTCTGCAAC+AGG 0.396738 2:-30322216 MsG0280008380.01.T01:CDS
GATGAAGATCTAGGGCGTTC+AGG 0.398577 2:-30321926 MsG0280008380.01.T01:CDS
GGTGAAGATTACAGTAGTTA+AGG 0.400983 2:-30321498 MsG0280008380.01.T01:CDS
ATGAGTGATGTCCTTAGAAA+TGG 0.402311 2:+30321994 None:intergenic
CTCCAAATGCTGGTAGTAAT+GGG 0.405201 2:-30322864 MsG0280008380.01.T01:CDS
CCAGCCTTTACTGCTAAAAT+GGG 0.406397 2:+30322151 None:intergenic
GAACCTGGTTTGATCAAGTT+GGG 0.410401 2:-30322036 MsG0280008380.01.T01:CDS
AGCGGAGGAGGTTGGTATTG+AGG 0.411724 2:+30322907 None:intergenic
TCTGAATCCACAAATGACTT+TGG 0.414308 2:+30323051 None:intergenic
ATACCTGATTGTGAAATCAT+TGG 0.415649 2:-30323078 MsG0280008380.01.T01:CDS
CTTCAAGAGATGGTGGATGC+TGG 0.419540 2:-30322181 MsG0280008380.01.T01:CDS
AAGTGATTAGCCATACATAT+TGG 0.420678 2:-30321378 MsG0280008380.01.T01:three_prime_UTR
AGAACCTGGTTTGATCAAGT+TGG 0.422430 2:-30322037 MsG0280008380.01.T01:CDS
CAATCATTTGAAGAATGAAT+GGG 0.424161 2:-30322488 MsG0280008380.01.T01:CDS
TTCCCAATGATTTCACAATC+AGG 0.429166 2:+30323075 None:intergenic
TGGGAATCCAAAGTCATTTG+TGG 0.432048 2:-30323058 MsG0280008380.01.T01:CDS
GGCGTTCAGGCAAGCCAGAC+TGG 0.443599 2:-30321913 MsG0280008380.01.T01:CDS
TCTTCAATGAGTTTGTGTTT+AGG 0.444396 2:-30321559 MsG0280008380.01.T01:CDS
CGAAGTCAGGAGACACAAAA+TGG 0.444863 2:-30321790 MsG0280008380.01.T01:CDS
AGGATCATTCAGGATTAACT+TGG 0.448406 2:-30321700 MsG0280008380.01.T01:CDS
GAAGCAGGGGAGGAGATTAT+GGG 0.448431 2:-30321662 MsG0280008380.01.T01:CDS
ATTCCGATGGAGGTGAAATA+CGG 0.449887 2:-30322615 MsG0280008380.01.T01:CDS
TTCAAGAGATGGTGGATGCT+GGG 0.453587 2:-30322180 MsG0280008380.01.T01:CDS
TTTGATCTCCTTGATTCCGA+TGG 0.453893 2:-30322628 MsG0280008380.01.T01:CDS
TAGACTAATGCCAATATGTA+TGG 0.454045 2:+30321368 None:intergenic
AATACAACTCTAGAACGATT+AGG 0.459015 2:+30324775 None:intergenic
GCTCCAAATGCTGGTAGTAA+TGG 0.459212 2:-30322865 MsG0280008380.01.T01:CDS
GAATTCAGTGGAAAGTCTAT+AGG 0.459727 2:-30322118 MsG0280008380.01.T01:CDS
TTTAGCAGTAAAGGCTGGTA+AGG 0.460163 2:-30322146 MsG0280008380.01.T01:CDS
TACCTGATTGTGAAATCATT+GGG 0.460436 2:-30323077 MsG0280008380.01.T01:CDS
TGATTGAAATTCTTCTGTGC+AGG 0.460517 2:+30322505 None:intergenic
AATAAGAAAGTGACGAAGTC+AGG 0.461922 2:-30321803 MsG0280008380.01.T01:CDS
GTAACTGCTTTCCAGGAAGC+AGG 0.462729 2:-30321677 MsG0280008380.01.T01:CDS
TAAAGCGGAGGAGGTTGGTA+TGG 0.464313 2:+30322814 None:intergenic
TACAGTAGTTAAGGCAGATA+AGG 0.467853 2:-30321489 MsG0280008380.01.T01:CDS
GCGGTGAGATTCACCGCCAT+TGG 0.468725 2:+30325522 None:intergenic
GAATGAATGGGAAATTATGC+TGG 0.470378 2:-30322476 MsG0280008380.01.T01:CDS
CCGTTTCTATGAAGCAATTG+AGG 0.474581 2:-30322566 MsG0280008380.01.T01:CDS
AAGGCAAGGGTTACTGCAAA+AGG 0.476738 2:-30322700 MsG0280008380.01.T01:CDS
GTTCCCATCGTAAGGAAGAA+TGG 0.477384 2:-30322304 MsG0280008380.01.T01:CDS
CGTAGGCAGTGATTGTAGCT+TGG 0.481037 2:-30321416 MsG0280008380.01.T01:exon
GCTCAAAATGCTGGTAGTAA+TGG 0.484784 2:-30322955 MsG0280008380.01.T01:CDS
TTCGTCACTTTCTTATTGCA+CGG 0.485857 2:+30321809 None:intergenic
GATGCAATAATCCGTAATCA+TGG 0.488858 2:+30321321 None:intergenic
TGTTGTAAAGCGGAGGAGGT+TGG 0.489573 2:+30322899 None:intergenic
AATGATCCTGGATTTGAGCT+TGG 0.492318 2:+30321714 None:intergenic
AAGTTAATCCTGAATGATCC+TGG 0.493959 2:+30321702 None:intergenic
TAGGGATTTAAAGCAGCTAT+AGG 0.496621 2:+30322742 None:intergenic
TTTCACCTCCATCGGAATCA+AGG 0.500395 2:+30322620 None:intergenic
TATGCTGGATTTAAATTCAA+CGG 0.500855 2:-30322461 MsG0280008380.01.T01:CDS
TACCCGTATTTCACCTCCAT+CGG 0.501159 2:+30322612 None:intergenic
GAGTCGAGTATCCATGATTA+CGG 0.502059 2:-30321332 MsG0280008380.01.T01:three_prime_UTR
GCTATAGGTATTACACGTGC+TGG 0.503122 2:+30322757 None:intergenic
GCTATTCCGGCGATAATCGC+CGG 0.503326 2:-30325495 MsG0280008380.01.T01:CDS
TAGATGCAACCAGGAGTTTG+AGG 0.505007 2:-30321759 MsG0280008380.01.T01:CDS
AATTTGGCTGCTCCAAATGC+TGG 0.507899 2:-30322874 MsG0280008380.01.T01:CDS
TGCTATCCTTGATGTTATTG+GGG 0.509422 2:-30322350 MsG0280008380.01.T01:CDS
AGCGGAGGAGGTTGGTATGG+AGG 0.511425 2:+30322817 None:intergenic
GATTATTATGGTGCTTAACA+TGG 0.514700 2:-30323109 MsG0280008380.01.T01:CDS
ATCCTTCAGTTCCCATCGTA+AGG 0.516057 2:-30322312 MsG0280008380.01.T01:CDS
ACGTCGCCGGCGATTATCGC+CGG 0.516823 2:+30325489 None:intergenic
TTCTATGAAGCAATTGAGGT+TGG 0.517168 2:-30322562 MsG0280008380.01.T01:CDS
ATTCCATTCTTCCTTACGAT+GGG 0.519102 2:+30322301 None:intergenic
ACAGTCTCAATGTCACTGAT+AGG 0.519707 2:+30322382 None:intergenic
GATCTCCTTGATTCCGATGG+AGG 0.519739 2:-30322625 MsG0280008380.01.T01:CDS
CGGTTTGGCGTCGACGTCGC+CGG 0.521923 2:+30325476 None:intergenic
TATAACAATGCTCGTGGAGA+TGG 0.523700 2:-30322664 MsG0280008380.01.T01:CDS
CGACCTTTGTAAAGCGGAGG+AGG 0.525294 2:+30322805 None:intergenic
TCAGGGTAGGTGGGCCATCA+AGG 0.528250 2:-30322719 MsG0280008380.01.T01:CDS
CTGAAGGAGAATTGTTGTCT+AGG 0.528586 2:+30322406 None:intergenic
AATTTGGCTGCTCAAAATGC+TGG 0.530811 2:-30322964 MsG0280008380.01.T01:CDS
CATTCCATTCTTCCTTACGA+TGG 0.533999 2:+30322300 None:intergenic
GAGCTTTGCCCAGATGAGGA+TGG 0.534821 2:-30322436 MsG0280008380.01.T01:CDS
CCTGGATTTGAGCTTGGAGA+AGG 0.534963 2:+30321720 None:intergenic
AATCACATTCCTCAAACTCC+TGG 0.536282 2:+30321750 None:intergenic
ATTTCTAAGGACATCACTCA+TGG 0.537700 2:-30321992 MsG0280008380.01.T01:CDS
TATCGCCGGAATAGCGTTTG+CGG 0.537944 2:+30325503 None:intergenic
GAGAACTTGAAGTAACGGTT+TGG 0.539039 2:+30325461 None:intergenic
GTATGTGTTGAAGTATGAAC+AGG 0.543799 2:-30321621 MsG0280008380.01.T01:CDS
ATGGCCCACCTACCCTGATA+GGG 0.544473 2:+30322724 None:intergenic
AAAGTTTACTTGATATCGAA+AGG 0.544592 2:-30322538 MsG0280008380.01.T01:CDS
TAAATCCCTATCAGGGTAGG+TGG 0.547460 2:-30322729 MsG0280008380.01.T01:CDS
GTAGGTGGGCCATCAAGGCA+AGG 0.549490 2:-30322714 MsG0280008380.01.T01:CDS
TTCCTTACGATGGGAACTGA+AGG 0.549709 2:+30322310 None:intergenic
TGGTATTGAGGTTGAACTGT+TGG 0.550725 2:+30322919 None:intergenic
TTTCCCAACTTGATCAAACC+AGG 0.553038 2:+30322033 None:intergenic
AGGCTCAGACCTTAAGAACC+TGG 0.553217 2:-30322051 MsG0280008380.01.T01:CDS
CTTTGTAAAGCGGAGGAGGT+TGG 0.553943 2:+30322809 None:intergenic
AGAGTGTTGAGCTAACACTT+TGG 0.559856 2:-30322234 MsG0280008380.01.T01:CDS
TGGAATGGAAACACTGAGAA+GGG 0.560059 2:-30322284 MsG0280008380.01.T01:CDS
CGCCGCTATAACAATGCTCG+TGG 0.561907 2:-30322670 MsG0280008380.01.T01:CDS
CCTTCTCCAAGCTCAAATCC+AGG 0.562294 2:-30321720 MsG0280008380.01.T01:CDS
CCTCAATTGCTTCATAGAAA+CGG 0.565250 2:+30322566 None:intergenic
CATCGTAAGGAAGAATGGAA+TGG 0.565891 2:-30322299 MsG0280008380.01.T01:CDS
ATGGAATGGAAACACTGAGA+AGG 0.567325 2:-30322285 MsG0280008380.01.T01:CDS
TGCTTTCCAGGAAGCAGGGG+AGG 0.568330 2:-30321672 MsG0280008380.01.T01:CDS
CCTCCGCTTTACAAAGGTCG+TGG 0.571787 2:-30322802 MsG0280008380.01.T01:CDS
TTGCCTGATAACACTGTGGC+TGG 0.572437 2:-30323009 MsG0280008380.01.T01:CDS
TAACTGCTTTCCAGGAAGCA+GGG 0.573726 2:-30321676 MsG0280008380.01.T01:CDS
TCAAGAGATGGTGGATGCTG+GGG 0.574359 2:-30322179 MsG0280008380.01.T01:CDS
AAATTAAAGATGAAGATCTA+GGG 0.575955 2:-30321934 MsG0280008380.01.T01:CDS
GGTTGAGCTTTGCCCAGATG+AGG 0.577862 2:-30322440 MsG0280008380.01.T01:CDS
GCTGCTTTAAATCCCTATCA+GGG 0.580315 2:-30322736 MsG0280008380.01.T01:CDS
TGGTATGGAGGTTGAACTGT+TGG 0.582038 2:+30322829 None:intergenic
ATGTCGAGAACTTGAAGTAA+CGG 0.582274 2:+30325456 None:intergenic
CAAGCTACAATCACTGCCTA+CGG 0.586389 2:+30321417 None:intergenic
GTATAGAACCATCCTCATCT+GGG 0.586999 2:+30322428 None:intergenic
AATGTCACTGATAGGTCTGA+AGG 0.587612 2:+30322390 None:intergenic
ATTATATAATGACGAACAGA+AGG 0.587920 2:-30321519 MsG0280008380.01.T01:CDS
TTTCTAAGGACATCACTCAT+GGG 0.588441 2:-30321991 MsG0280008380.01.T01:CDS
AACTGCTTTCCAGGAAGCAG+GGG 0.589254 2:-30321675 MsG0280008380.01.T01:CDS
ATCGGTCCTCATGAATGATA+CGG 0.591847 2:+30321874 None:intergenic
AGGACAAAAGCTTCAAGAGA+TGG 0.592318 2:-30322191 MsG0280008380.01.T01:CDS
TTCCGATGGAGGTGAAATAC+GGG 0.595001 2:-30322614 MsG0280008380.01.T01:CDS
GGTAAGGTTAATGAATTCAG+TGG 0.596983 2:-30322130 MsG0280008380.01.T01:CDS
ACAAAAGCTTCAAGAGATGG+TGG 0.598927 2:-30322188 MsG0280008380.01.T01:CDS
TGAATTATTCTGCAGAGAGT+AGG 0.600929 2:-30321466 MsG0280008380.01.T01:CDS
CTCCACGAGCATTGTTATAG+CGG 0.600995 2:+30322668 None:intergenic
TAGGTGGGCCATCAAGGCAA+GGG 0.604948 2:-30322713 MsG0280008380.01.T01:CDS
TCACAACCCCAATAACATCA+AGG 0.606648 2:+30322344 None:intergenic
CTTTAAATCCCTATCAGGGT+AGG 0.611287 2:-30322732 MsG0280008380.01.T01:CDS
GTCGATCTCCAATCATCAGA+GGG 0.611616 2:+30321831 None:intergenic
AGCTGTGTAACAAAATGGAT+CGG 0.612353 2:+30321856 None:intergenic
GGATCATTCAGGATTAACTT+GGG 0.613069 2:-30321699 MsG0280008380.01.T01:CDS
TTCTTAAGGTCTGAGCCTCA+GGG 0.623006 2:+30322056 None:intergenic
GTTATCACATTTCATCAACA+AGG 0.624469 2:+30324731 None:intergenic
GTTTAGGCTGAAAATCAAAG+AGG 0.625551 2:-30321543 MsG0280008380.01.T01:CDS
GGTGAATTCTGCAACAGGGA+AGG 0.626099 2:-30322211 MsG0280008380.01.T01:CDS
TTCTAAGGACATCACTCATG+GGG 0.629562 2:-30321990 MsG0280008380.01.T01:CDS
GCCAGACTGGATAACAATGA+GGG 0.637901 2:-30321900 MsG0280008380.01.T01:CDS
GGTCGATCTCCAATCATCAG+AGG 0.638969 2:+30321830 None:intergenic
AAATCCCTATCAGGGTAGGT+GGG 0.640512 2:-30322728 MsG0280008380.01.T01:CDS
CAACCTCCTCCGCTTTACAA+AGG 0.641625 2:-30322808 MsG0280008380.01.T01:CDS
AGCCAGACTGGATAACAATG+AGG 0.656016 2:-30321901 MsG0280008380.01.T01:CDS
CAGCCTTTACTGCTAAAATG+GGG 0.656745 2:+30322152 None:intergenic
GCACCACGACCTTTGTAAAG+CGG 0.657064 2:+30322799 None:intergenic
CCACGACCTTTGTAAAGCGG+AGG 0.662907 2:+30322802 None:intergenic
GCAGTGTGATAGATGCAACC+AGG 0.664374 2:-30321768 MsG0280008380.01.T01:CDS
TGTGTTGAAGTATGAACAGG+AGG 0.677244 2:-30321618 MsG0280008380.01.T01:CDS
GGGCAACCGTATCATTCATG+AGG 0.684770 2:-30321880 MsG0280008380.01.T01:CDS
AGTGTTGAGCTAACACTTTG+GGG 0.692814 2:-30322232 MsG0280008380.01.T01:CDS
CATAAATCCAGATTTCCCTG+AGG 0.709312 2:-30322071 MsG0280008380.01.T01:CDS
TTGGGGTGAATTCTGCAACA+GGG 0.712179 2:-30322215 MsG0280008380.01.T01:CDS
AAGCAGGGGAGGAGATTATG+GGG 0.738154 2:-30321661 MsG0280008380.01.T01:CDS
TCTAAGGACATCACTCATGG+GGG 0.753824 2:-30321989 MsG0280008380.01.T01:CDS
AGCATTGCCTGATAACACTG+TGG 0.782811 2:-30323013 MsG0280008380.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAAATTATTATTAATATTTC+TGG + Chr2:30323797-30323816 None:intergenic 10.0%
!! CAGAAATATTAATAATAATT+TGG - Chr2:30323795-30323814 MsG0280008380.01.T01:intron 10.0%
!! AAATTAAAGATGAAGATCTA+GGG - Chr2:30324841-30324860 MsG0280008380.01.T01:intron 20.0%
!! AATTAAGCAACAAAAAAAGA+AGG + Chr2:30321543-30321562 None:intergenic 20.0%
!! ATGTATCATCTATAATGTTT+AGG + Chr2:30323526-30323545 None:intergenic 20.0%
!! ATTAAGCAACAAAAAAAGAA+GGG + Chr2:30321542-30321561 None:intergenic 20.0%
!! TAACAATTAGTGTATGAATT+AGG - Chr2:30321696-30321715 MsG0280008380.01.T01:CDS 20.0%
!! TAATTGTTAGTGTAAGAATT+AGG - Chr2:30322742-30322761 MsG0280008380.01.T01:CDS 20.0%
!! TACATAAGTGTTATATTCTT+TGG - Chr2:30323353-30323372 MsG0280008380.01.T01:intron 20.0%
!! TGTATCATCTATAATGTTTA+GGG + Chr2:30323525-30323544 None:intergenic 20.0%
!!! AACATTTTAGGTTGAAAATT+TGG + Chr2:30322888-30322907 None:intergenic 20.0%
!!! AATGTTTTAGGTTGAAATTT+TGG + Chr2:30323310-30323329 None:intergenic 20.0%
!!! ATTTTCAACCTAAAATGTTA+TGG - Chr2:30322889-30322908 MsG0280008380.01.T01:CDS 20.0%
!!! TATTTCTAAGAATTAGGATA+TGG - Chr2:30322019-30322038 MsG0280008380.01.T01:CDS 20.0%
!!! TGTATCATCAATAACATTTT+AGG + Chr2:30322900-30322919 None:intergenic 20.0%
!!! TGTGATTTTCACTTTTTATT+AGG - Chr2:30321795-30321814 MsG0280008380.01.T01:CDS 20.0%
!!! TTATGTACATTTCACTTTTT+AGG - Chr2:30322120-30322139 MsG0280008380.01.T01:CDS 20.0%
! AAAGTTTACTTGATATCGAA+AGG - Chr2:30324237-30324256 MsG0280008380.01.T01:intron 25.0%
! AAGTTGCATTTGTAAGAATT+AGG - Chr2:30321849-30321868 MsG0280008380.01.T01:CDS 25.0%
! ACAAATTTGAACTAAAGCAA+TGG + Chr2:30322689-30322708 None:intergenic 25.0%
! ATTATATAATGACGAACAGA+AGG - Chr2:30325256-30325275 MsG0280008380.01.T01:intron 25.0%
! CAAATTAAAGATGAAGATCT+AGG - Chr2:30324840-30324859 MsG0280008380.01.T01:intron 25.0%
! CAATCATTTGAAGAATGAAT+GGG - Chr2:30324287-30324306 MsG0280008380.01.T01:intron 25.0%
! TATGCTGGATTTAAATTCAA+CGG - Chr2:30324314-30324333 MsG0280008380.01.T01:intron 25.0%
! TCAATCATTTGAAGAATGAA+TGG - Chr2:30324286-30324305 MsG0280008380.01.T01:intron 25.0%
! TTAGTGATAGTATTAGGATA+TGG - Chr2:30322970-30322989 MsG0280008380.01.T01:CDS 25.0%
! TTAGTGTATGAATTAGGATA+TGG - Chr2:30321702-30321721 MsG0280008380.01.T01:CDS 25.0%
!! ATAATGTTTAGGGTGAAAAT+TGG + Chr2:30323515-30323534 None:intergenic 25.0%
!! GAGTTGTATTTCTAAGAATT+AGG - Chr2:30322013-30322032 MsG0280008380.01.T01:CDS 25.0%
!! GTGATAGTTAAATTACGTTT+TGG - Chr2:30323010-30323029 MsG0280008380.01.T01:CDS 25.0%
!! TTAATCGATTATCGTGTTTT+TGG - Chr2:30321590-30321609 MsG0280008380.01.T01:CDS 25.0%
!!! TTATGTGCATTTCACTTTTT+AGG - Chr2:30321961-30321980 MsG0280008380.01.T01:CDS 25.0%
AACATTGTAGATGATGCATT+TGG - Chr2:30323324-30323343 MsG0280008380.01.T01:intron 30.0%
AACGTTCTGATAGATGTATT+TGG - Chr2:30322164-30322183 MsG0280008380.01.T01:CDS 30.0%
AATGCTATCCTTGATGTTAT+TGG - Chr2:30324423-30324442 MsG0280008380.01.T01:intron 30.0%
AATGTTATGGATGATGCATT+TGG - Chr2:30323118-30323137 MsG0280008380.01.T01:intron 30.0%
ACTATAACACTTTATTGTGG+CGG + Chr2:30322517-30322536 None:intergenic 30.0%
AGATGATACATTAGAGCTTA+TGG - Chr2:30323535-30323554 MsG0280008380.01.T01:intron 30.0%
ATACCTGATTGTGAAATCAT+TGG - Chr2:30323697-30323716 MsG0280008380.01.T01:intron 30.0%
ATGCTATCCTTGATGTTATT+GGG - Chr2:30324424-30324443 MsG0280008380.01.T01:intron 30.0%
CATTTGTAAGAATTAGGTGA+TGG - Chr2:30321855-30321874 MsG0280008380.01.T01:CDS 30.0%
GAGTGATTAGTGATAGTATT+AGG - Chr2:30322964-30322983 MsG0280008380.01.T01:CDS 30.0%
GATTATTATGGTGCTTAACA+TGG - Chr2:30323666-30323685 MsG0280008380.01.T01:intron 30.0%
GATTTCACAATCAGGTATTA+TGG + Chr2:30323695-30323714 None:intergenic 30.0%
GTTATCACATTTCATCAACA+AGG + Chr2:30322047-30322066 None:intergenic 30.0%
TACACTAACAATTAACCCAA+GGG + Chr2:30322736-30322755 None:intergenic 30.0%
TACCTGATTGTGAAATCATT+GGG - Chr2:30323698-30323717 MsG0280008380.01.T01:intron 30.0%
TAGACTAATGCCAATATGTA+TGG + Chr2:30325410-30325429 None:intergenic 30.0%
TAGTCAAATAGCAACTATAG+CGG + Chr2:30322541-30322560 None:intergenic 30.0%
TCCGCTTTACAACAAAAATT+TGG - Chr2:30323885-30323904 MsG0280008380.01.T01:intron 30.0%
TCTTCAATGAGTTTGTGTTT+AGG - Chr2:30325216-30325235 MsG0280008380.01.T01:intron 30.0%
TGATTAATGTTATGGAACCT+CGG - Chr2:30323183-30323202 MsG0280008380.01.T01:intron 30.0%
TTACACTAACAATTAACCCA+AGG + Chr2:30322737-30322756 None:intergenic 30.0%
TTCCTTGTACAGGATTATTA+TGG - Chr2:30323654-30323673 MsG0280008380.01.T01:intron 30.0%
TTGAATCTAAAGGACAATTC+TGG - Chr2:30324516-30324535 MsG0280008380.01.T01:intron 30.0%
! AAGTGATTAGCCATACATAT+TGG - Chr2:30325397-30325416 MsG0280008380.01.T01:intron 30.0%
! AATGCATCATAACTGACTTT+AGG - Chr2:30323590-30323609 MsG0280008380.01.T01:intron 30.0%
! GTGATGGAATCTTATATTGA+TGG - Chr2:30321871-30321890 MsG0280008380.01.T01:CDS 30.0%
! TGCATCATCCATAACATTTT+AGG + Chr2:30323116-30323135 None:intergenic 30.0%
! TGCATCATCTACAATGTTTT+AGG + Chr2:30323322-30323341 None:intergenic 30.0%
! TTTAGTTTCTTGTATCCCTT+GGG - Chr2:30322718-30322737 MsG0280008380.01.T01:CDS 30.0%
!! AAATTTTTGTTGTAAAGCGG+AGG + Chr2:30323886-30323905 None:intergenic 30.0%
!! AATACAACTCTAGAACGATT+AGG + Chr2:30322003-30322022 None:intergenic 30.0%
!! ATTTTATTTCCAAGTTCCGT+AGG - Chr2:30325342-30325361 MsG0280008380.01.T01:intron 30.0%
!! GCCAAATTTTTGTTGTAAAG+CGG + Chr2:30323889-30323908 None:intergenic 30.0%
!!! TTTTAGTTTCTTGTATCCCT+TGG - Chr2:30322717-30322736 MsG0280008380.01.T01:CDS 30.0%
AAGTTAATCCTGAATGATCC+TGG + Chr2:30325076-30325095 None:intergenic 35.0%
AATAAGAAAGTGACGAAGTC+AGG - Chr2:30324972-30324991 MsG0280008380.01.T01:intron 35.0%
AGCTGTGTAACAAAATGGAT+CGG + Chr2:30324922-30324941 None:intergenic 35.0%
AGGATCATTCAGGATTAACT+TGG - Chr2:30325075-30325094 MsG0280008380.01.T01:intron 35.0%
ATGAGTGATGTCCTTAGAAA+TGG + Chr2:30324784-30324803 None:intergenic 35.0%
ATGTCGAGAACTTGAAGTAA+CGG + Chr2:30321322-30321341 None:intergenic 35.0%
ATTATCATAGTTCACTACCG+AGG + Chr2:30323203-30323222 None:intergenic 35.0%
ATTCCATTCTTCCTTACGAT+GGG + Chr2:30324477-30324496 None:intergenic 35.0%
CACCATAATAATCCTGTACA+AGG + Chr2:30323659-30323678 None:intergenic 35.0%
CCTCAATTGCTTCATAGAAA+CGG + Chr2:30324212-30324231 None:intergenic 35.0%
CTCAAAATGCTGGTAGTAAT+GGG - Chr2:30323821-30323840 MsG0280008380.01.T01:intron 35.0%
GAATGAATGGGAAATTATGC+TGG - Chr2:30324299-30324318 MsG0280008380.01.T01:intron 35.0%
GAATTCAGTGGAAAGTCTAT+AGG - Chr2:30324657-30324676 MsG0280008380.01.T01:intron 35.0%
GATGCAATAATCCGTAATCA+TGG + Chr2:30325457-30325476 None:intergenic 35.0%
GGATCATTCAGGATTAACTT+GGG - Chr2:30325076-30325095 MsG0280008380.01.T01:intron 35.0%
GGCACTATAACACTTTATTG+TGG + Chr2:30322520-30322539 None:intergenic 35.0%
GGTAAGGTTAATGAATTCAG+TGG - Chr2:30324645-30324664 MsG0280008380.01.T01:intron 35.0%
GGTGAAGATTACAGTAGTTA+AGG - Chr2:30325277-30325296 MsG0280008380.01.T01:intron 35.0%
GTAACTTCAGTGAAGAATTG+TGG - Chr2:30323401-30323420 MsG0280008380.01.T01:intron 35.0%
GTATGTGTTGAAGTATGAAC+AGG - Chr2:30325154-30325173 MsG0280008380.01.T01:intron 35.0%
GTCAAATAGCTGTCAAAACA+TGG + Chr2:30322284-30322303 None:intergenic 35.0%
GTTTAGGCTGAAAATCAAAG+AGG - Chr2:30325232-30325251 MsG0280008380.01.T01:intron 35.0%
TACAGTAGTTAAGGCAGATA+AGG - Chr2:30325286-30325305 MsG0280008380.01.T01:intron 35.0%
TCTGAATCCACAAATGACTT+TGG + Chr2:30323727-30323746 None:intergenic 35.0%
TGAATTATTCTGCAGAGAGT+AGG - Chr2:30325309-30325328 MsG0280008380.01.T01:intron 35.0%
TGATTGAAATTCTTCTGTGC+AGG + Chr2:30324273-30324292 None:intergenic 35.0%
TGCTATCCTTGATGTTATTG+GGG - Chr2:30324425-30324444 MsG0280008380.01.T01:intron 35.0%
TGCTTCTCTATCCATTTCTA+AGG - Chr2:30324770-30324789 MsG0280008380.01.T01:CDS 35.0%
TGGGCGAATGATTAATGTTA+TGG - Chr2:30323175-30323194 MsG0280008380.01.T01:intron 35.0%
TGGTGCAGTTATGAAAAATG+AGG - Chr2:30323993-30324012 MsG0280008380.01.T01:intron 35.0%
TGTTAGATCGTGGAAAATAG+TGG - Chr2:30322196-30322215 MsG0280008380.01.T01:CDS 35.0%
TTCCCAATGATTTCACAATC+AGG + Chr2:30323703-30323722 None:intergenic 35.0%
TTCTATGAAGCAATTGAGGT+TGG - Chr2:30324213-30324232 MsG0280008380.01.T01:intron 35.0%
TTGATCAAACCAGGTTCTTA+AGG + Chr2:30324736-30324755 None:intergenic 35.0%
! AAATACTTGCGATTCTGAAG+CGG + Chr2:30321514-30321533 None:intergenic 35.0%
! ACATAAGTGTTAGCTTCTTG+TGG - Chr2:30323148-30323167 MsG0280008380.01.T01:intron 35.0%
! AGTTTTGCGTATCTCATTCT+TGG + Chr2:30324814-30324833 None:intergenic 35.0%
! ATTTCTAAGGACATCACTCA+TGG - Chr2:30324783-30324802 MsG0280008380.01.T01:CDS 35.0%
! GTTTTGCGTATCTCATTCTT+GGG + Chr2:30324813-30324832 None:intergenic 35.0%
! TAGGGATTTAAAGCAGCTAT+AGG + Chr2:30324036-30324055 None:intergenic 35.0%
! TTCGTCACTTTCTTATTGCA+CGG + Chr2:30324969-30324988 None:intergenic 35.0%
! TTTCTAAGGACATCACTCAT+GGG - Chr2:30324784-30324803 MsG0280008380.01.T01:CDS 35.0%
!! CAGAAGTGCTTTAGTTCAAA+TGG - Chr2:30322364-30322383 MsG0280008380.01.T01:CDS 35.0%
!! GTGTTTGTTTTTCCTTGTAC+AGG - Chr2:30323644-30323663 MsG0280008380.01.T01:intron 35.0%
!! GTTCAAATGGATTACATCAG+CGG - Chr2:30322377-30322396 MsG0280008380.01.T01:CDS 35.0%
!! TTTCCCCATTTTAGCAGTAA+AGG - Chr2:30324620-30324639 MsG0280008380.01.T01:intron 35.0%
!!! GAGAAGGGTTTTGAATCTAA+AGG - Chr2:30324506-30324525 MsG0280008380.01.T01:intron 35.0%
!!! TTGTGTGCGTTTTGCTTTTT+AGG - Chr2:30321631-30321650 MsG0280008380.01.T01:CDS 35.0%
AATACTGGACGAGTTAAGCA+AGG - Chr2:30321454-30321473 MsG0280008380.01.T01:CDS 40.0%
AATCACATTCCTCAAACTCC+TGG + Chr2:30325028-30325047 None:intergenic 40.0%
AATGATCCTGGATTTGAGCT+TGG + Chr2:30325064-30325083 None:intergenic 40.0%
AATGTCACTGATAGGTCTGA+AGG + Chr2:30324388-30324407 None:intergenic 40.0%
AATTTGGCTGCTCAAAATGC+TGG - Chr2:30323811-30323830 MsG0280008380.01.T01:intron 40.0%
ACAAAAGCTTCAAGAGATGG+TGG - Chr2:30324587-30324606 MsG0280008380.01.T01:intron 40.0%
ACAGTCTCAATGTCACTGAT+AGG + Chr2:30324396-30324415 None:intergenic 40.0%
ACCAGCCTTTACTGCTAAAA+TGG + Chr2:30324628-30324647 None:intergenic 40.0%
AGGACAAAAGCTTCAAGAGA+TGG - Chr2:30324584-30324603 MsG0280008380.01.T01:intron 40.0%
ATCGGTCCTCATGAATGATA+CGG + Chr2:30324904-30324923 None:intergenic 40.0%
ATGGAATGGAAACACTGAGA+AGG - Chr2:30324490-30324509 MsG0280008380.01.T01:intron 40.0%
ATTCCGATGGAGGTGAAATA+CGG - Chr2:30324160-30324179 MsG0280008380.01.T01:intron 40.0%
CAGCCTTTACTGCTAAAATG+GGG + Chr2:30324626-30324645 None:intergenic 40.0%
CATAAATCCAGATTTCCCTG+AGG - Chr2:30324704-30324723 MsG0280008380.01.T01:intron 40.0%
CATCGTAAGGAAGAATGGAA+TGG - Chr2:30324476-30324495 MsG0280008380.01.T01:intron 40.0%
CATTCCATTCTTCCTTACGA+TGG + Chr2:30324478-30324497 None:intergenic 40.0%
CCAGCCTTTACTGCTAAAAT+GGG + Chr2:30324627-30324646 None:intergenic 40.0%
CCGTTTCTATGAAGCAATTG+AGG - Chr2:30324209-30324228 MsG0280008380.01.T01:intron 40.0%
CTCCAAATGCTGGTAGTAAT+GGG - Chr2:30323911-30323930 MsG0280008380.01.T01:intron 40.0%
CTGAAGGAGAATTGTTGTCT+AGG + Chr2:30324372-30324391 None:intergenic 40.0%
CTTTAAATCCCTATCAGGGT+AGG - Chr2:30324043-30324062 MsG0280008380.01.T01:intron 40.0%
GAGAACTTGAAGTAACGGTT+TGG + Chr2:30321317-30321336 None:intergenic 40.0%
GAGTCGAGTATCCATGATTA+CGG - Chr2:30325443-30325462 MsG0280008380.01.T01:intron 40.0%
GCTCAAAATGCTGGTAGTAA+TGG - Chr2:30323820-30323839 MsG0280008380.01.T01:intron 40.0%
GTATAGAACCATCCTCATCT+GGG + Chr2:30324350-30324369 None:intergenic 40.0%
TATAACAATGCTCGTGGAGA+TGG - Chr2:30324111-30324130 MsG0280008380.01.T01:intron 40.0%
TCACAACCCCAATAACATCA+AGG + Chr2:30324434-30324453 None:intergenic 40.0%
TGGAATGGAAACACTGAGAA+GGG - Chr2:30324491-30324510 MsG0280008380.01.T01:intron 40.0%
TGGGAATCCAAAGTCATTTG+TGG - Chr2:30323717-30323736 MsG0280008380.01.T01:intron 40.0%
TGTGTTGAAGTATGAACAGG+AGG - Chr2:30325157-30325176 MsG0280008380.01.T01:intron 40.0%
TTTAGCAGTAAAGGCTGGTA+AGG - Chr2:30324629-30324648 MsG0280008380.01.T01:intron 40.0%
TTTCCCAACTTGATCAAACC+AGG + Chr2:30324745-30324764 None:intergenic 40.0%
TTTGATCTCCTTGATTCCGA+TGG - Chr2:30324147-30324166 MsG0280008380.01.T01:intron 40.0%
! AGAACCTGGTTTGATCAAGT+TGG - Chr2:30324738-30324757 MsG0280008380.01.T01:intron 40.0%
! AGCTGCTTTAAATCCCTATC+AGG - Chr2:30324038-30324057 MsG0280008380.01.T01:intron 40.0%
! AGTGTTGAGCTAACACTTTG+GGG - Chr2:30324543-30324562 MsG0280008380.01.T01:intron 40.0%
! GAACCTGGTTTGATCAAGTT+GGG - Chr2:30324739-30324758 MsG0280008380.01.T01:CDS 40.0%
! GAATCAGTGTTGTTAGATCG+TGG - Chr2:30322186-30322205 MsG0280008380.01.T01:CDS 40.0%
! GCTGCTTTAAATCCCTATCA+GGG - Chr2:30324039-30324058 MsG0280008380.01.T01:intron 40.0%
! GTTAGCTTCTTCTATCTCCT+GGG - Chr2:30322940-30322959 MsG0280008380.01.T01:CDS 40.0%
! TGGTATTGAGGTTGAACTGT+TGG + Chr2:30323859-30323878 None:intergenic 40.0%
! TGTTAGCTTCTTCTATCTCC+TGG - Chr2:30322939-30322958 MsG0280008380.01.T01:CDS 40.0%
! TTCTAAGGACATCACTCATG+GGG - Chr2:30324785-30324804 MsG0280008380.01.T01:CDS 40.0%
!! ACGTTGTTGGTGAGAGTTTT+TGG + Chr2:30321362-30321381 None:intergenic 40.0%
!! AGAGTGTTGAGCTAACACTT+TGG - Chr2:30324541-30324560 MsG0280008380.01.T01:intron 40.0%
!! GAGTGTTGAGCTAACACTTT+GGG - Chr2:30324542-30324561 MsG0280008380.01.T01:intron 40.0%
!! GTAGTAATGGGCAGAATTTC+AGG - Chr2:30323833-30323852 MsG0280008380.01.T01:intron 40.0%
!! TAACTCGTCCAGTATTGACT+CGG + Chr2:30321450-30321469 None:intergenic 40.0%
!! TTTTTGTTGTAAAGCGGAGG+AGG + Chr2:30323883-30323902 None:intergenic 40.0%
AAATCCCTATCAGGGTAGGT+GGG - Chr2:30324047-30324066 MsG0280008380.01.T01:intron 45.0%
AACTTGGGTAACTGCTTTCC+AGG - Chr2:30325091-30325110 MsG0280008380.01.T01:intron 45.0%
AAGGCAAGGGTTACTGCAAA+AGG - Chr2:30324075-30324094 MsG0280008380.01.T01:intron 45.0%
AATTTGGCTGCTCCAAATGC+TGG - Chr2:30323901-30323920 MsG0280008380.01.T01:intron 45.0%
AGCATTGCCTGATAACACTG+TGG - Chr2:30323762-30323781 MsG0280008380.01.T01:intron 45.0%
AGCCAGACTGGATAACAATG+AGG - Chr2:30324874-30324893 MsG0280008380.01.T01:intron 45.0%
ATCCTTCAGTTCCCATCGTA+AGG - Chr2:30324463-30324482 MsG0280008380.01.T01:intron 45.0%
CAAGCTACAATCACTGCCTA+CGG + Chr2:30325361-30325380 None:intergenic 45.0%
CAGGAGGATGATGAGAAGTT+TGG - Chr2:30325173-30325192 MsG0280008380.01.T01:intron 45.0%
CATAGCGTGATGAGACGAAA+CGG + Chr2:30321407-30321426 None:intergenic 45.0%
CGAAGTCAGGAGACACAAAA+TGG - Chr2:30324985-30325004 MsG0280008380.01.T01:intron 45.0%
CTATCACTAATCACTCTCCC+AGG + Chr2:30322960-30322979 None:intergenic 45.0%
GAAGAAGACGGTAACGTTGT+TGG + Chr2:30321375-30321394 None:intergenic 45.0%
GCCAGACTGGATAACAATGA+GGG - Chr2:30324875-30324894 MsG0280008380.01.T01:intron 45.0%
GCTATAGGTATTACACGTGC+TGG + Chr2:30324021-30324040 None:intergenic 45.0%
GCTCAAATCCAGGATCATTC+AGG - Chr2:30325065-30325084 MsG0280008380.01.T01:intron 45.0%
GCTCCAAATGCTGGTAGTAA+TGG - Chr2:30323910-30323929 MsG0280008380.01.T01:intron 45.0%
GGATTACATCAGCGGTACTA+TGG - Chr2:30322385-30322404 MsG0280008380.01.T01:CDS 45.0%
GGGCAAGCTGTGTAACAAAA+TGG + Chr2:30324927-30324946 None:intergenic 45.0%
GGTATAGAACCATCCTCATC+TGG + Chr2:30324351-30324370 None:intergenic 45.0%
GTAATCGAGAAGCTGAACGA+TGG + Chr2:30321482-30321501 None:intergenic 45.0%
GTCGATCTCCAATCATCAGA+GGG + Chr2:30324947-30324966 None:intergenic 45.0%
GTTCCCATCGTAAGGAAGAA+TGG - Chr2:30324471-30324490 MsG0280008380.01.T01:intron 45.0%
TAAATCCCTATCAGGGTAGG+TGG - Chr2:30324046-30324065 MsG0280008380.01.T01:intron 45.0%
TAACTGCTTTCCAGGAAGCA+GGG - Chr2:30325099-30325118 MsG0280008380.01.T01:intron 45.0%
TACCCGTATTTCACCTCCAT+CGG + Chr2:30324166-30324185 None:intergenic 45.0%
TAGATGCAACCAGGAGTTTG+AGG - Chr2:30325016-30325035 MsG0280008380.01.T01:intron 45.0%
TCAGGCAATGCTTTCTGAAC+TGG + Chr2:30323754-30323773 None:intergenic 45.0%
TCTAAGGACATCACTCATGG+GGG - Chr2:30324786-30324805 MsG0280008380.01.T01:CDS 45.0%
TGCCCATTACTACCAGCATT+TGG + Chr2:30323826-30323845 None:intergenic 45.0%
TGGTATGGAGGTTGAACTGT+TGG + Chr2:30323949-30323968 None:intergenic 45.0%
TTCCGATGGAGGTGAAATAC+GGG - Chr2:30324161-30324180 MsG0280008380.01.T01:intron 45.0%
TTCCTTACGATGGGAACTGA+AGG + Chr2:30324468-30324487 None:intergenic 45.0%
TTCTTAAGGTCTGAGCCTCA+GGG + Chr2:30324722-30324741 None:intergenic 45.0%
TTGGGGTGAATTCTGCAACA+GGG - Chr2:30324560-30324579 MsG0280008380.01.T01:intron 45.0%
TTTCACCTCCATCGGAATCA+AGG + Chr2:30324158-30324177 None:intergenic 45.0%
! CTCCACGAGCATTGTTATAG+CGG + Chr2:30324110-30324129 None:intergenic 45.0%
! GTTAGCTTCTTGTGGCTCTT+GGG - Chr2:30323156-30323175 MsG0280008380.01.T01:intron 45.0%
! TGTTAGCTTCTTGTGGCTCT+TGG - Chr2:30323155-30323174 MsG0280008380.01.T01:intron 45.0%
! TTTGGGGTGAATTCTGCAAC+AGG - Chr2:30324559-30324578 MsG0280008380.01.T01:intron 45.0%
!! CCCATTTTAGCAGTAAAGGC+TGG - Chr2:30324624-30324643 MsG0280008380.01.T01:intron 45.0%
!! TTCAAGAGATGGTGGATGCT+GGG - Chr2:30324595-30324614 MsG0280008380.01.T01:intron 45.0%
AACTGCTTTCCAGGAAGCAG+GGG - Chr2:30325100-30325119 MsG0280008380.01.T01:intron 50.0%
AAGCAGGGGAGGAGATTATG+GGG - Chr2:30325114-30325133 MsG0280008380.01.T01:intron 50.0%
ACAGCTTGCCCTCTGATGAT+TGG - Chr2:30324936-30324955 MsG0280008380.01.T01:intron 50.0%
AGGCTCAGACCTTAAGAACC+TGG - Chr2:30324724-30324743 MsG0280008380.01.T01:intron 50.0%
CAACCTCCTCCGCTTTACAA+AGG - Chr2:30323877-30323896 MsG0280008380.01.T01:intron 50.0%
CAATCACTGCCTACGGAACT+TGG + Chr2:30325354-30325373 None:intergenic 50.0%
CCTGGATTTGAGCTTGGAGA+AGG + Chr2:30325058-30325077 None:intergenic 50.0%
CCTTCTCCAAGCTCAAATCC+AGG - Chr2:30325055-30325074 MsG0280008380.01.T01:intron 50.0%
CGTAGGCAGTGATTGTAGCT+TGG - Chr2:30325359-30325378 MsG0280008380.01.T01:intron 50.0%
CTCAACGACCGAGTCAATAC+TGG - Chr2:30321439-30321458 MsG0280008380.01.T01:CDS 50.0%
CTTTGTAAAGCGGAGGAGGT+TGG + Chr2:30323969-30323988 None:intergenic 50.0%
GAACCAGCCACAGTGTTATC+AGG + Chr2:30323772-30323791 None:intergenic 50.0%
GAAGCAGGGGAGGAGATTAT+GGG - Chr2:30325113-30325132 MsG0280008380.01.T01:intron 50.0%
GATCTCCTTGATTCCGATGG+AGG - Chr2:30324150-30324169 MsG0280008380.01.T01:intron 50.0%
GCACCACGACCTTTGTAAAG+CGG + Chr2:30323979-30323998 None:intergenic 50.0%
GCAGTGTGATAGATGCAACC+AGG - Chr2:30325007-30325026 MsG0280008380.01.T01:intron 50.0%
GCCCTCATTGTTATCCAGTC+TGG + Chr2:30324879-30324898 None:intergenic 50.0%
GGGCAACCGTATCATTCATG+AGG - Chr2:30324895-30324914 MsG0280008380.01.T01:intron 50.0%
GGTCGATCTCCAATCATCAG+AGG + Chr2:30324948-30324967 None:intergenic 50.0%
GGTGAATTCTGCAACAGGGA+AGG - Chr2:30324564-30324583 MsG0280008380.01.T01:intron 50.0%
GTAACTGCTTTCCAGGAAGC+AGG - Chr2:30325098-30325117 MsG0280008380.01.T01:intron 50.0%
GTTCTTAAGGTCTGAGCCTC+AGG + Chr2:30324723-30324742 None:intergenic 50.0%
TATCGCCGGAATAGCGTTTG+CGG + Chr2:30321275-30321294 None:intergenic 50.0%
TCTCACCGCAAACGCTATTC+CGG - Chr2:30321267-30321286 MsG0280008380.01.T01:three_prime_UTR 50.0%
TGCAGTAACCCTTGCCTTGA+TGG + Chr2:30324073-30324092 None:intergenic 50.0%
TGTTGTAAAGCGGAGGAGGT+TGG + Chr2:30323879-30323898 None:intergenic 50.0%
TTGCCTGATAACACTGTGGC+TGG - Chr2:30323766-30323785 MsG0280008380.01.T01:intron 50.0%
! GATGAAGATCTAGGGCGTTC+AGG - Chr2:30324849-30324868 MsG0280008380.01.T01:intron 50.0%
!! CTTCAAGAGATGGTGGATGC+TGG - Chr2:30324594-30324613 MsG0280008380.01.T01:intron 50.0%
!! TAAAGCGGAGGAGGTTGGTA+TGG + Chr2:30323874-30323893 None:intergenic 50.0%
!! TCAAGAGATGGTGGATGCTG+GGG - Chr2:30324596-30324615 MsG0280008380.01.T01:intron 50.0%
ATGGCCCACCTACCCTGATA+GGG + Chr2:30324054-30324073 None:intergenic 55.0%
CCACGACCTTTGTAAAGCGG+AGG + Chr2:30323976-30323995 None:intergenic 55.0%
CCTCCGCTTTACAAAGGTCG+TGG - Chr2:30323973-30323992 MsG0280008380.01.T01:intron 55.0%
CGACCTTTGTAAAGCGGAGG+AGG + Chr2:30323973-30323992 None:intergenic 55.0%
CGCCGCTATAACAATGCTCG+TGG - Chr2:30324105-30324124 MsG0280008380.01.T01:intron 55.0%
GAGCTTTGCCCAGATGAGGA+TGG - Chr2:30324339-30324358 MsG0280008380.01.T01:intron 55.0%
GCTATTCCGGCGATAATCGC+CGG - Chr2:30321280-30321299 MsG0280008380.01.T01:three_prime_UTR 55.0%
GGAAGCAGGGGAGGAGATTA+TGG - Chr2:30325112-30325131 MsG0280008380.01.T01:intron 55.0%
GGTTGAGCTTTGCCCAGATG+AGG - Chr2:30324335-30324354 MsG0280008380.01.T01:intron 55.0%
GTCTGAGCCTCAGGGAAATC+TGG + Chr2:30324714-30324733 None:intergenic 55.0%
GTGATGAGACGAAACGGCGT+CGG + Chr2:30321401-30321420 None:intergenic 55.0%
TAATCTCCTCCCCTGCTTCC+TGG + Chr2:30325112-30325131 None:intergenic 55.0%
TAGGTGGGCCATCAAGGCAA+GGG - Chr2:30324062-30324081 MsG0280008380.01.T01:intron 55.0%
!! AGCGGAGGAGGTTGGTATTG+AGG + Chr2:30323871-30323890 None:intergenic 55.0%
!! GACTCGGTCGTTGAGTTGAG+CGG + Chr2:30321434-30321453 None:intergenic 55.0%
GATGGCCCACCTACCCTGAT+AGG + Chr2:30324055-30324074 None:intergenic 60.0%
GTAGGTGGGCCATCAAGGCA+AGG - Chr2:30324061-30324080 MsG0280008380.01.T01:intron 60.0%
TCAGGGTAGGTGGGCCATCA+AGG - Chr2:30324056-30324075 MsG0280008380.01.T01:intron 60.0%
TGCTTTCCAGGAAGCAGGGG+AGG - Chr2:30325103-30325122 MsG0280008380.01.T01:intron 60.0%
! CGGCGTCGGAGAGAAGAAGA+CGG + Chr2:30321387-30321406 None:intergenic 60.0%
!! AGCGGAGGAGGTTGGTATGG+AGG + Chr2:30323961-30323980 None:intergenic 60.0%
ACGTCGCCGGCGATTATCGC+CGG + Chr2:30321289-30321308 None:intergenic 65.0%
GGCGTTCAGGCAAGCCAGAC+TGG - Chr2:30324862-30324881 MsG0280008380.01.T01:intron 65.0%
!! CGGTTTGGCGTCGACGTCGC+CGG + Chr2:30321302-30321321 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr2 gene 30321256 30325541 30321256 ID=MsG0280008380.01;Name=MsG0280008380.01
Chr2 mRNA 30321256 30325541 30321256 ID=MsG0280008380.01.T01;Parent=MsG0280008380.01;Name=MsG0280008380.01.T01;_AED=0.45;_eAED=0.48;_QI=0|0|0.25|1|1|1|4|171|639
Chr2 exon 30321256 30323131 30321256 ID=MsG0280008380.01.T01:exon:5778;Parent=MsG0280008380.01.T01
Chr2 exon 30324739 30324814 30324739 ID=MsG0280008380.01.T01:exon:5777;Parent=MsG0280008380.01.T01
Chr2 exon 30324938 30324980 30324938 ID=MsG0280008380.01.T01:exon:5776;Parent=MsG0280008380.01.T01
Chr2 exon 30325446 30325541 30325446 ID=MsG0280008380.01.T01:exon:5775;Parent=MsG0280008380.01.T01
Chr2 CDS 30325446 30325541 30325446 ID=MsG0280008380.01.T01:cds;Parent=MsG0280008380.01.T01
Chr2 CDS 30324938 30324980 30324938 ID=MsG0280008380.01.T01:cds;Parent=MsG0280008380.01.T01
Chr2 CDS 30324739 30324814 30324739 ID=MsG0280008380.01.T01:cds;Parent=MsG0280008380.01.T01
Chr2 CDS 30321427 30323131 30321427 ID=MsG0280008380.01.T01:cds;Parent=MsG0280008380.01.T01
Chr2 three_prime_UTR 30321256 30321426 30321256 ID=MsG0280008380.01.T01:three_prime_utr;Parent=MsG0280008380.01.T01
Gene Sequence

>MsG0280008380.01.T01

ATGGCGGTGAATCTCACCGCAAACGCTATTCCGGCGATAATCGCCGGCGACGTCGACGCCAAACCGTTACTTCAAGTTCTCGACATTGCAACAATCGTCATTTCAAATTTGAACTTAAAACGTTCTAGAAGTTGCATTTGTCATTTCGAGTTTGAACCTAATCGTTCTAGAGTTGTATTTCTAAGAATTAGGATATGGAACCTTGTTGATGAAATGATTATTATGGTGCTTAACATGGAAACCATAATACCTGATTGTGAAATCATTGGGAATCCAAAGTCATTTGTGGATTCAGAGTTACCAGTTCAGAAAGCATTGCCTGATAACACTGTGGCTGGTTCGTCCAGAAATATTAATAATAATTTGGCTGCTCAAAATGCTGGTAGTAATGGGCAGAATTTCAGGCCAACAGTTCAACCTCAATACCAACCTCCTCCGCTTTACAACAAAAATTTGGCTGCTCCAAATGCTGGTAGTAATGGGCAGAATTTCAGGCCAACAGTTCAACCTCCATACCAACCTCCTCCGCTTTACAAAGGTCGTGGTGCAGTTATGAAAAATGAGGCGCCAGCACGTGTAATACCTATAGCTGCTTTAAATCCCTATCAGGGTAGGTGGGCCATCAAGGCAAGGGTTACTGCAAAAGGAGATTTGCGCCGCTATAACAATGCTCGTGGAGATGGAAAAGTCTTCTCGTTTGATCTCCTTGATTCCGATGGAGGTGAAATACGGGTAACTTGCTTTAATGCTGTTGTTGACCGTTTCTATGAAGCAATTGAGGTTGGTAAAGTTTACTTGATATCGAAAGGTAGCTTGAAACCTGCACAGAAGAATTTCAATCATTTGAAGAATGAATGGGAAATTATGCTGGATTTAAATTCAACGGTTGAGCTTTGCCCAGATGAGGATGGTTCTATACCTAGACAACAATTCTCCTTCAGACCTATCAGTGACATTGAGACTGTTGAGAGTAATGCTATCCTTGATGTTATTGGGGTTGTGACATCTGTAAATCCTTCAGTTCCCATCGTAAGGAAGAATGGAATGGAAACACTGAGAAGGGTTTTGAATCTAAAGGACAATTCTGGCAAGAGTGTTGAGCTAACACTTTGGGGTGAATTCTGCAACAGGGAAGGACAAAAGCTTCAAGAGATGGTGGATGCTGGGGTTTTCCCCATTTTAGCAGTAAAGGCTGGTAAGGTTAATGAATTCAGTGGAAAGTCTATAGGCTCTATTTCTACTACACAGCTTTTCATAAATCCAGATTTCCCTGAGGCTCAGACCTTAAGAACCTGGTTTGATCAAGTTGGGAAAGATTCTGCTTCTCTATCCATTTCTAAGGACATCACTCATGGGGGACCCAAGAATGAGATACGCAAAACTGTGTCTCAAATTAAAGATGAAGATCTAGGGCGTTCAGGCAAGCCAGACTGGATAACAATGAGGGCAACCGTATCATTCATGAGGACCGATCCATTTTGTTACACAGCTTGCCCTCTGATGATTGGAGATCGACCGTGCAATAAGAAAGTGACGAAGTCAGGAGACACAAAATGGCAGTGTGATAGATGCAACCAGGAGTTTGAGGAATGTGATTATCGTTACCTTCTCCAAGCTCAAATCCAGGATCATTCAGGATTAACTTGGGTAACTGCTTTCCAGGAAGCAGGGGAGGAGATTATGGGGTACTCAGCAAAAGATCTGTATGTGTTGAAGTATGAACAGGAGGATGATGAGAAGTTTGGAGATATAATTAAGAGTAGACTCTTCAATGAGTTTGTGTTTAGGCTGAAAATCAAAGAGGAATTATATAATGACGAACAGAAGGTGAAGATTACAGTAGTTAAGGCAGATAAGGTGAATTATTCTGCAGAGAGTAGGTACATGCTTGATTTTATTTCCAAGTTCCGTAGGCAGTGA
Protein sequence

>MsG0280008380.01.T01

MAVNLTANAIPAIIAGDVDAKPLLQVLDIATIVISNLNLKRSRSCICHFEFEPNRSRVVFLRIRIWNLVDEMIIMVLNMETIIPDCEIIGNPKSFVDSELPVQKALPDNTVAGSSRNINNNLAAQNAGSNGQNFRPTVQPQYQPPPLYNKNLAAPNAGSNGQNFRPTVQPPYQPPPLYKGRGAVMKNEAPARVIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEAIEVGKVYLISKGSLKPAQKNFNHLKNEWEIMLDLNSTVELCPDEDGSIPRQQFSFRPISDIETVESNAILDVIGVVTSVNPSVPIVRKNGMETLRRVLNLKDNSGKSVELTLWGEFCNREGQKLQEMVDAGVFPILAVKAGKVNEFSGKSIGSISTTQLFINPDFPEAQTLRTWFDQVGKDSASLSISKDITHGGPKNEIRKTVSQIKDEDLGRSGKPDWITMRATVSFMRTDPFCYTACPLMIGDRPCNKKVTKSGDTKWQCDRCNQEFEECDYRYLLQAQIQDHSGLTWVTAFQEAGEEIMGYSAKDLYVLKYEQEDDEKFGDIIKSRLFNEFVFRLKIKEELYNDEQKVKITVVKADKVNYSAESRYMLDFISKFRRQ*