AlfalfaGEDB | MsG0580025504.01

M. sativa cultivar ZhongmuNo.1 / MsG0580025504.01

KEGG: K11253
GO: GO:0000786 GO:0003677 GO:0046982
PFAM: PF00125

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580025504.01.T01	KYP58465.1	100	136	0	0	1	136	5	140	1.76E-92	273

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580025504.01.T01	P68427	100	136	0	0	1	136	1	136	5.13E-95	272

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580025504.01.T01	A0A452Z7H5	100.000	136	0	0	1	136	100	235	3.73e-93	278

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080047815.01	MsG0580025504.01	0.870005	2.022888e-66	7.747167e-63
MsG0080048258.01	MsG0580025504.01	0.838079	3.558272e-57	4.713740e-54
MsG0080048775.01	MsG0580025504.01	0.837506	4.992946e-57	6.499832e-54
MsG0080048781.01	MsG0580025504.01	0.823242	1.539068e-53	1.317867e-50
MsG0080048797.01	MsG0580025504.01	0.871556	6.244479e-67	2.529762e-63
MsG0180000718.01	MsG0580025504.01	0.812451	4.212794e-51	2.679658e-48
MsG0180001293.01	MsG0580025504.01	0.861605	9.121324e-64	2.595551e-60
MsG0180001588.01	MsG0580025504.01	0.844158	8.990335e-59	1.438759e-55
MsG0180001719.01	MsG0580025504.01	0.886085	4.648062e-72	3.272419e-68
MsG0180002134.01	MsG0580025504.01	0.844730	6.309255e-59	1.028005e-55
MsG0180002135.01	MsG0580025504.01	0.813953	1.971954e-51	1.305830e-48
MsG0180002217.01	MsG0580025504.01	0.832674	8.262684e-56	9.300616e-53
MsG0180002218.01	MsG0580025504.01	0.885987	5.060959e-72	3.548525e-68
MsG0180002397.01	MsG0580025504.01	0.856183	3.821830e-62	9.044338e-59
MsG0180002428.01	MsG0580025504.01	0.844841	5.887243e-59	9.626167e-56
MsG0180002583.01	MsG0580025504.01	0.825753	3.947552e-54	3.630607e-51
MsG0180003421.01	MsG0580025504.01	0.807676	4.500022e-50	2.521950e-47
MsG0180003698.01	MsG0580025504.01	0.847884	8.719448e-60	1.571956e-56
MsG0180003857.01	MsG0580025504.01	0.890435	9.878877e-74	8.303781e-70
MsG0180003905.01	MsG0580025504.01	0.858924	5.898271e-63	1.530554e-59
MsG0180003983.01	MsG0580025504.01	0.834367	3.122732e-56	3.698079e-53
MsG0180004120.01	MsG0580025504.01	0.938759	3.956129e-99	3.897240e-94
MsG0180004185.01	MsG0580025504.01	0.863086	3.198626e-64	9.579567e-61
MsG0180004299.01	MsG0580025504.01	0.848476	5.982017e-60	1.099291e-56
MsG0180004471.01	MsG0580025504.01	0.836553	8.746702e-57	1.106046e-53
MsG0180004475.01	MsG0580025504.01	0.803235	3.840231e-49	1.919733e-46
MsG0180004538.01	MsG0580025504.01	0.910340	2.089871e-82	4.249042e-78
MsG0180004583.01	MsG0580025504.01	0.919420	4.604715e-87	1.478702e-82
MsG0180004835.01	MsG0580025504.01	0.805821	1.109338e-49	5.927214e-47
MsG0180004972.01	MsG0580025504.01	0.811063	8.443025e-51	5.174959e-48
MsG0180004994.01	MsG0580025504.01	0.847124	1.410125e-59	2.481566e-56
MsG0180004995.01	MsG0580025504.01	0.883972	2.853277e-71	1.848495e-67
MsG0180005048.01	MsG0580025504.01	0.910718	1.368115e-82	2.831991e-78
MsG0180005655.01	MsG0580025504.01	0.883524	4.170630e-71	2.653690e-67
MsG0180006006.01	MsG0580025504.01	0.814741	1.320464e-51	8.932774e-49
MsG0180006062.01	MsG0580025504.01	0.834251	3.338366e-56	3.939743e-53
MsG0180006133.01	MsG0580025504.01	0.899052	2.902816e-77	3.527797e-73
MsG0280006378.01	MsG0580025504.01	0.809065	2.274569e-50	1.322250e-47
MsG0280006398.01	MsG0580025504.01	0.803482	3.413913e-49	1.717539e-46
MsG0280010825.01	MsG0580025504.01	0.801981	6.967670e-49	3.373398e-46
MsG0280011083.01	MsG0580025504.01	0.820056	8.390831e-53	6.569795e-50
MsG0380012118.01	MsG0580025504.01	0.824838	6.498806e-54	5.823307e-51
MsG0380012956.01	MsG0580025504.01	0.867608	1.207404e-65	4.240976e-62
MsG0380013584.01	MsG0580025504.01	0.825727	4.004124e-54	3.679894e-51
MsG0380014542.01	MsG0580025504.01	0.914196	2.543987e-84	6.247190e-80
MsG0380014544.01	MsG0580025504.01	0.868210	7.735853e-66	2.775632e-62
MsG0380014666.01	MsG0580025504.01	0.931428	3.830307e-94	2.414192e-89
MsG0480018526.01	MsG0580025504.01	0.800124	1.669424e-48	7.711680e-46
MsG0480018767.01	MsG0580025504.01	0.812073	5.093752e-51	3.206856e-48
MsG0480018785.01	MsG0580025504.01	0.832646	8.396852e-56	9.443647e-53
MsG0480019601.01	MsG0580025504.01	0.839538	1.492631e-57	2.067463e-54
MsG0480020366.01	MsG0580025504.01	0.831851	1.320621e-55	1.450917e-52
MsG0480020398.01	MsG0580025504.01	0.918977	7.996234e-87	2.506483e-82
MsG0480020856.01	MsG0580025504.01	0.864084	1.568065e-64	4.862425e-61
MsG0480020921.01	MsG0580025504.01	0.880448	5.444925e-70	3.069685e-66
MsG0480020926.01	MsG0580025504.01	0.882663	8.622953e-71	5.296794e-67
MsG0480020937.01	MsG0580025504.01	0.900831	4.941854e-78	6.496893e-74
MsG0480020970.01	MsG0580025504.01	0.881934	1.588071e-70	9.485611e-67
MsG0480021015.01	MsG0580025504.01	0.846494	2.097015e-59	3.616176e-56
MsG0480021016.01	MsG0580025504.01	0.804285	2.324449e-49	1.193792e-46
MsG0480021048.01	MsG0580025504.01	0.825660	4.153165e-54	3.809595e-51
MsG0480021100.01	MsG0580025504.01	0.933416	1.940092e-95	1.375603e-90
MsG0480021301.01	MsG0580025504.01	0.924422	7.196581e-90	3.037269e-85
MsG0480021456.01	MsG0580025504.01	0.859620	3.645454e-63	9.687744e-60
MsG0480021704.01	MsG0580025504.01	0.886413	3.495085e-72	2.494100e-68
MsG0480021773.01	MsG0580025504.01	0.922579	8.180011e-89	3.118374e-84
MsG0480021902.01	MsG0580025504.01	0.926604	3.730430e-91	1.776318e-86
MsG0480022307.01	MsG0580025504.01	0.942966	2.806442e-102	3.651476e-97
MsG0480022320.01	MsG0580025504.01	0.829707	4.426956e-55	4.567070e-52
MsG0480022378.01	MsG0580025504.01	0.883374	4.738200e-71	2.995841e-67
MsG0480022682.01	MsG0580025504.01	0.826580	2.509989e-54	2.363281e-51
MsG0480022784.01	MsG0580025504.01	0.881445	2.387114e-70	1.399000e-66
MsG0480022991.01	MsG0580025504.01	0.822671	2.091165e-53	1.761996e-50
MsG0480023003.01	MsG0580025504.01	0.876338	1.512100e-68	7.303549e-65
MsG0480023414.01	MsG0580025504.01	0.852289	5.091084e-61	1.058852e-57
MsG0480023424.01	MsG0580025504.01	0.926909	2.449699e-91	1.187940e-86
MsG0480023426.01	MsG0580025504.01	0.958482	2.114504e-116	7.911382e-111
MsG0480023428.01	MsG0580025504.01	0.879375	1.312079e-69	7.097345e-66
MsG0480023626.01	MsG0580025504.01	0.846562	2.009272e-59	3.472337e-56
MsG0480023653.01	MsG0580025504.01	0.844626	6.730760e-59	1.093075e-55
MsG0480023679.01	MsG0580025504.01	0.850571	1.557660e-60	3.064408e-57
MsG0480023706.01	MsG0580025504.01	0.892438	1.586716e-74	1.450617e-70
MsG0480023842.01	MsG0580025504.01	0.913405	6.389503e-84	1.508617e-79
MsG0480023913.01	MsG0580025504.01	0.848283	6.763160e-60	1.235000e-56
MsG0480024002.01	MsG0580025504.01	0.852253	5.212995e-61	1.082889e-57
MsG0480024019.01	MsG0580025504.01	0.894830	1.705249e-75	1.723803e-71
MsG0580024158.01	MsG0580025504.01	0.807306	5.391986e-50	2.993044e-47
MsG0580024276.01	MsG0580025504.01	0.923230	3.490348e-89	1.378994e-84
MsG0580024742.01	MsG0580025504.01	0.842255	2.890822e-58	4.357987e-55
MsG0580024748.01	MsG0580025504.01	0.804987	1.658841e-49	8.675161e-47
MsG0580024787.01	MsG0580025504.01	0.859801	3.216958e-63	8.603031e-60
MsG0580024954.01	MsG0580025504.01	0.820060	8.373763e-53	6.557172e-50
MsG0580025177.01	MsG0580025504.01	0.843843	1.092249e-58	1.730868e-55
MsG0580025186.01	MsG0580025504.01	0.852267	5.163015e-61	1.073057e-57
MsG0580025203.01	MsG0580025504.01	0.849813	2.541777e-60	4.877853e-57
MsG0580025504.01	MsG0580025506.01	0.887362	1.525480e-72	1.131029e-68
MsG0580025504.01	MsG0580025775.01	0.801092	1.059676e-48	5.017052e-46
MsG0580025504.01	MsG0580026343.01	0.817554	3.105133e-52	2.268519e-49
MsG0580025504.01	MsG0580028927.01	0.893442	6.263877e-75	5.967009e-71
MsG0580025504.01	MsG0580028955.01	0.924681	5.086060e-90	2.175302e-85
MsG0580025504.01	MsG0580029102.01	0.810201	1.296586e-50	7.766917e-48
MsG0580025504.01	MsG0580029591.01	0.858903	5.983247e-63	1.551367e-59
MsG0580025504.01	MsG0580030141.01	0.803510	3.368824e-49	1.696107e-46
MsG0580025504.01	MsG0680031356.01	0.860300	2.274070e-63	6.186375e-60
MsG0580025504.01	MsG0680035350.01	0.830877	2.293393e-55	2.447678e-52
MsG0580025504.01	MsG0680035776.01	0.856099	4.043198e-62	9.542295e-59
MsG0580025504.01	MsG0680035792.01	0.881440	2.396250e-70	1.404088e-66
MsG0580025504.01	MsG0780036534.01	0.888255	6.941691e-73	5.337985e-69
MsG0580025504.01	MsG0780036553.01	0.811544	6.638664e-51	4.120985e-48
MsG0580025504.01	MsG0780037741.01	0.811055	8.476181e-51	5.194316e-48
MsG0580025504.01	MsG0780038402.01	0.841185	5.537543e-58	8.072474e-55
MsG0580025504.01	MsG0780038642.01	0.885955	5.202942e-72	3.643418e-68
MsG0580025504.01	MsG0780038736.01	0.912458	1.902544e-83	4.282362e-79
MsG0580025504.01	MsG0780038952.01	0.802471	5.523680e-49	2.708026e-46
MsG0580025504.01	MsG0780039536.01	0.843506	1.343426e-58	2.106500e-55
MsG0580025504.01	MsG0780039861.01	0.831519	1.594353e-55	1.734383e-52
MsG0580025504.01	MsG0780040364.01	0.802269	6.078062e-49	2.964574e-46
MsG0580025504.01	MsG0780040459.01	0.821307	4.328324e-53	3.508564e-50
MsG0580025504.01	MsG0780040474.01	0.831445	1.662903e-55	1.804970e-52
MsG0580025504.01	MsG0780040554.01	0.862307	5.561707e-64	1.621272e-60
MsG0580025504.01	MsG0780040620.01	0.893170	8.065458e-75	7.600561e-71
MsG0580025504.01	MsG0780040641.01	0.899838	1.332641e-77	1.676902e-73
MsG0580025504.01	MsG0780040671.01	0.837177	6.063949e-57	7.813866e-54
MsG0580025504.01	MsG0780040830.01	0.800825	1.201534e-48	5.649788e-46
MsG0580025504.01	MsG0780040899.01	0.883932	2.950145e-71	1.908050e-67
MsG0580025504.01	MsG0780041008.01	0.859991	2.820065e-63	7.591863e-60
MsG0580025504.01	MsG0780041219.01	0.833359	5.580636e-56	6.411802e-53
MsG0580025504.01	MsG0780041232.01	0.837834	4.112817e-57	5.408460e-54
MsG0580025504.01	MsG0780041273.01	0.929600	5.509131e-93	3.107583e-88
MsG0580025504.01	MsG0780041340.01	0.812323	4.491658e-51	2.847106e-48
MsG0580025504.01	MsG0780041359.01	0.903405	3.587832e-79	5.303790e-75
MsG0580025504.01	MsG0780041546.01	0.859845	3.118804e-63	8.353586e-60
MsG0580025504.01	MsG0880041930.01	0.806833	6.788358e-50	3.722118e-47
MsG0580025504.01	MsG0880043684.01	0.847985	8.173882e-60	1.478281e-56
MsG0580025504.01	MsG0880043714.01	0.835286	1.833092e-56	2.231649e-53
MsG0580025504.01	MsG0880043752.01	0.836708	7.988015e-57	1.014850e-53
MsG0580025504.01	MsG0880044103.01	0.829876	4.027720e-55	4.175684e-52
MsG0580025504.01	MsG0880044437.01	0.880533	5.074019e-70	2.871222e-66
MsG0580025504.01	MsG0880045015.01	0.904549	1.092907e-79	1.699580e-75
MsG0580025504.01	MsG0880045356.01	0.842896	1.954284e-58	3.005699e-55
MsG0580025504.01	MsG0880045439.01	0.819920	9.013579e-53	7.030517e-50
MsG0580025504.01	MsG0880045584.01	0.824699	7.004778e-54	6.252196e-51
MsG0580025504.01	MsG0880045612.01	0.881488	2.301620e-70	1.351143e-66
MsG0580025504.01	MsG0880045647.01	0.910433	1.884273e-82	3.846558e-78
MsG0580025504.01	MsG0880045879.01	0.847732	9.596671e-60	1.721893e-56
MsG0580025504.01	MsG0880045989.01	0.804764	1.846844e-49	9.603265e-47
MsG0580025504.01	MsG0880046431.01	0.804439	2.158838e-49	1.113111e-46
MsG0580025504.01	MsG0880046529.01	0.858833	6.279698e-63	1.624360e-59
MsG0580025504.01	MsG0880046904.01	0.893123	8.424332e-75	7.924468e-71
MsG0580025504.01	MsG0880046905.01	0.913892	3.628492e-84	8.774093e-80
MsG0580025504.01	MsG0880046906.01	0.831998	1.214523e-55	1.340097e-52
MsG0580025504.01	MsG0880046993.01	0.837987	3.756652e-57	4.963530e-54
MsG0580025504.01	MsG0880047311.01	0.812851	3.443616e-51	2.213306e-48
MsG0580025504.01	MsG0880047414.01	0.815565	8.661036e-52	5.992313e-49
MsG0580025504.01	MsG0880047649.01	0.896935	2.287930e-76	2.528197e-72
MsG0580025504.01	MsG0880047681.01	0.811012	8.659729e-51	5.301173e-48
MsG0380015090.01	MsG0580025504.01	0.894004	3.705427e-75	3.616468e-71
MsG0380015219.01	MsG0580025504.01	0.834983	2.186085e-56	2.637103e-53
MsG0380015340.01	MsG0580025504.01	0.903442	3.455401e-79	5.117368e-75
MsG0380015394.01	MsG0580025504.01	0.848594	5.547446e-60	1.023174e-56
MsG0380015402.01	MsG0580025504.01	0.857018	2.171206e-62	5.283081e-59
MsG0380015656.01	MsG0580025504.01	0.805345	1.396383e-49	7.369869e-47
MsG0380015756.01	MsG0580025504.01	0.803967	2.706660e-49	1.378826e-46
MsG0380015954.01	MsG0580025504.01	0.863256	2.834157e-64	8.538045e-61
MsG0380016027.01	MsG0580025504.01	0.883036	6.301723e-71	3.930389e-67
MsG0380016091.01	MsG0580025504.01	0.838636	2.556075e-57	3.444579e-54
MsG0380016092.01	MsG0580025504.01	0.806564	7.737977e-50	4.213509e-47
MsG0380016165.01	MsG0580025504.01	0.835919	1.267361e-56	1.572311e-53
MsG0380016217.01	MsG0580025504.01	0.828483	8.770003e-55	8.728551e-52
MsG0380016225.01	MsG0580025504.01	0.868668	5.502866e-66	2.007319e-62
MsG0380016819.01	MsG0580025504.01	0.810407	1.170824e-50	7.051416e-48
MsG0380017128.01	MsG0580025504.01	0.844192	8.800836e-59	1.410049e-55
MsG0380017150.01	MsG0580025504.01	0.801885	7.289362e-49	3.520953e-46
MsG0380017181.01	MsG0580025504.01	0.843079	1.746909e-58	2.702061e-55
MsG0380017282.01	MsG0580025504.01	0.828395	9.207349e-55	9.140719e-52
MsG0380017332.01	MsG0580025504.01	0.876809	1.039001e-68	5.107426e-65
MsG0380017416.01	MsG0580025504.01	0.801764	7.719334e-49	3.716834e-46
MsG0380017440.01	MsG0580025504.01	0.808679	2.751193e-50	1.582940e-47
MsG0380017588.01	MsG0580025504.01	0.837109	6.310303e-57	8.114532e-54
MsG0380017605.01	MsG0580025504.01	0.874943	4.548838e-68	2.086572e-64
MsG0380017632.01	MsG0580025504.01	0.850647	1.483047e-60	2.925044e-57
MsG0380017696.01	MsG0580025504.01	0.894716	1.897499e-75	1.909034e-71
MsG0380017932.01	MsG0580025504.01	0.846086	2.709225e-59	4.610034e-56
MsG0380018055.01	MsG0580025504.01	0.855253	7.140330e-62	1.638352e-58
MsG0480018106.01	MsG0580025504.01	0.839337	1.683434e-57	2.317642e-54
MsG0480018228.01	MsG0580025504.01	0.919536	3.982457e-87	1.285069e-82
MsG0280006563.01	MsG0580025504.01	0.835463	1.653916e-56	2.023969e-53
MsG0280006717.01	MsG0580025504.01	0.815575	8.616410e-52	5.963039e-49
MsG0280006909.01	MsG0580025504.01	0.826639	2.429130e-54	2.291178e-51
MsG0280006924.01	MsG0580025504.01	0.800741	1.250290e-48	5.866538e-46
MsG0280007003.01	MsG0580025504.01	0.817201	3.728106e-52	2.697455e-49
MsG0280007092.01	MsG0580025504.01	0.816308	5.912600e-52	4.174974e-49
MsG0280007688.01	MsG0580025504.01	0.833496	5.157851e-56	5.950233e-53
MsG0280007695.01	MsG0580025504.01	0.808121	3.619301e-50	2.052226e-47
MsG0280007919.01	MsG0580025504.01	0.893041	9.087893e-75	8.519656e-71
MsG0280009216.01	MsG0580025504.01	0.823129	1.635381e-53	1.395963e-50
MsG0280009866.01	MsG0580025504.01	0.819760	9.805402e-53	7.613897e-50

PPI

Gene1	Gene2	Type
MsG0780039858.01	MsG0580025504.01	PPI
MsG0880044910.01	MsG0580025504.01	PPI
MsG0380012103.01	MsG0580025504.01	PPI
MsG0380016970.01	MsG0580025504.01	PPI
MsG0880046700.01	MsG0580025504.01	PPI
MsG0280007919.01	MsG0580025504.01	PPI
MsG0480021015.01	MsG0580025504.01	PPI
MsG0580025504.01	MsG0780036534.01	PPI
MsG0880044910.01	MsG0580025504.01	PPI
MsG0480022796.01	MsG0580025504.01	PPI
MsG0780038642.01	MsG0580025504.01	PPI
MsG0780041592.01	MsG0580025504.01	PPI
MsG0580025504.01	MsG0480020920.01	PPI
MsG0680034619.01	MsG0580025504.01	PPI
MsG0480023842.01	MsG0580025504.01	PPI
MsG0380018077.01	MsG0580025504.01	PPI
MsG0580029382.01	MsG0580025504.01	PPI
MsG0480020919.01	MsG0580025504.01	PPI
MsG0380016970.01	MsG0580025504.01	PPI
MsG0580025504.01	MsG0880044881.01	PPI
MsG0580029044.01	MsG0580025504.01	PPI
MsG0380017977.01	MsG0580025504.01	PPI
MsG0180000092.01	MsG0580025504.01	PPI
MsG0880045996.01	MsG0580025504.01	PPI
MsG0580025504.01	MsG0480023842.01	PPI
MsG0480021049.01	MsG0580025504.01	PPI
MsG0480021302.01	MsG0580025504.01	PPI
MsG0580025504.01	MsG0780041593.01	PPI
MsG0480021252.01	MsG0580025504.01	PPI
MsG0480022307.01	MsG0580025504.01	PPI
MsG0480020918.01	MsG0580025504.01	PPI
MsG0880045015.01	MsG0580025504.01	PPI
MsG0580025506.01	MsG0580025504.01	PPI
MsG0480020927.01	MsG0580025504.01	PPI
MsG0880044881.01	MsG0580025504.01	PPI
MsG0480020969.01	MsG0580025504.01	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580025504.01.T01	MTR_7g059070	100.000	136	0	0	1	136	1	136	4.99e-96	272
MsG0580025504.01.T01	MTR_5g029820	100.000	136	0	0	1	136	1	136	4.99e-96	272
MsG0580025504.01.T01	MTR_5g029770	100.000	136	0	0	1	136	1	136	4.99e-96	272
MsG0580025504.01.T01	MTR_4g065990	100.000	136	0	0	1	136	1	136	4.99e-96	272
MsG0580025504.01.T01	MTR_4g088150	100.000	136	0	0	1	136	1	136	4.99e-96	272
MsG0580025504.01.T01	MTR_2g035230	100.000	136	0	0	1	136	1	136	4.99e-96	272
MsG0580025504.01.T01	MTR_8g092720	100.000	136	0	0	1	136	1	136	4.99e-96	272
MsG0580025504.01.T01	MTR_8g063500	100.000	136	0	0	1	136	1	136	4.99e-96	272
MsG0580025504.01.T01	MTR_8g103245	100.000	136	0	0	1	136	1	136	4.99e-96	272
MsG0580025504.01.T01	MTR_8g092820	100.000	136	0	0	1	136	1	136	4.99e-96	272
MsG0580025504.01.T01	MTR_7g013610	100.000	136	0	0	1	136	100	235	1.15e-95	275
MsG0580025504.01.T01	MTR_4g097175	97.059	136	4	0	1	136	1	136	3.42e-93	265
MsG0580025504.01.T01	MTR_1g023630	97.059	136	4	0	1	136	1	136	3.42e-93	265
MsG0580025504.01.T01	MTR_8g061940	97.059	136	4	0	1	136	1	136	3.42e-93	265
MsG0580025504.01.T01	MTR_8g099430	96.324	136	5	0	1	136	1	136	1.44e-92	264
MsG0580025504.01.T01	MTR_4g097170	96.324	136	5	0	1	136	42	177	2.38e-91	262
MsG0580025504.01.T01	MTR_2g082310	89.706	136	14	0	1	136	1	136	1.44e-86	248
MsG0580025504.01.T01	MTR_2g082340	89.706	136	14	0	1	136	1	136	1.44e-86	248
MsG0580025504.01.T01	MTR_2g082370	85.616	146	11	1	1	136	1	146	1.82e-82	238
MsG0580025504.01.T01	MTR_2g082400	84.559	136	19	2	1	135	1	135	6.64e-75	219
MsG0580025504.01.T01	MTR_7g013600	86.607	112	15	0	25	136	2	113	1.05e-65	195
MsG0580025504.01.T01	MTR_7g023830	67.164	134	43	1	1	134	1	133	6.74e-56	171
MsG0580025504.01.T01	MTR_1g023630	73.504	117	15	3	1	111	1	107	3.96e-52	160
MsG0580025504.01.T01	MTR_5g024630	67.241	116	35	2	1	116	1	113	1.69e-45	144
MsG0580025504.01.T01	MTR_7g023880	58.647	133	41	3	3	134	18	137	5.67e-43	139
MsG0580025504.01.T01	MTR_5g024530	68.182	110	12	2	19	128	68	154	4.74e-42	137
MsG0580025504.01.T01	MTR_0197s0100	100.000	66	0	0	1	66	1	66	1.50e-40	132
MsG0580025504.01.T01	MTR_8g027840	55.102	98	43	1	37	133	28	125	5.01e-30	105
MsG0580025504.01.T01	MTR_8g105150	53.846	91	10	1	37	127	11	69	1.48e-25	92.4
MsG0580025504.01.T01	MTR_8g092740	97.368	38	1	0	99	136	118	155	4.75e-20	80.9
MsG0580025504.01.T01	MTR_5g089120	76.190	42	10	0	82	123	6	47	6.26e-18	73.6
MsG0580025504.01.T01	MTR_5g024600	62.963	54	20	0	1	54	1	54	1.81e-15	66.2
MsG0580025504.01.T01	MTR_4g128040	75.676	37	9	0	79	115	20	56	3.48e-15	66.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580025504.01.T01	AT5G65360	99.265	136	1	0	1	136	1	136	1.62e-95	271
MsG0580025504.01.T01	AT5G10390	99.265	136	1	0	1	136	1	136	1.62e-95	271
MsG0580025504.01.T01	AT5G10400	99.265	136	1	0	1	136	1	136	1.62e-95	271
MsG0580025504.01.T01	AT3G27360	99.265	136	1	0	1	136	1	136	1.62e-95	271
MsG0580025504.01.T01	AT1G09200	99.265	136	1	0	1	136	1	136	1.62e-95	271
MsG0580025504.01.T01	AT5G10980	97.059	136	4	0	1	136	1	136	3.59e-93	265
MsG0580025504.01.T01	AT4G40040	97.059	136	4	0	1	136	1	136	3.59e-93	265
MsG0580025504.01.T01	AT4G40040	97.059	136	4	0	1	136	1	136	3.59e-93	265
MsG0580025504.01.T01	AT4G40040	97.059	136	4	0	1	136	1	136	3.59e-93	265
MsG0580025504.01.T01	AT4G40030	97.059	136	4	0	1	136	1	136	3.59e-93	265
MsG0580025504.01.T01	AT4G40030	97.059	136	4	0	1	136	1	136	3.59e-93	265
MsG0580025504.01.T01	AT4G40030	97.059	136	4	0	1	136	1	136	3.59e-93	265
MsG0580025504.01.T01	AT4G40030	97.059	136	4	0	1	136	29	164	7.04e-93	266
MsG0580025504.01.T01	AT5G65350	94.853	136	7	0	1	136	1	136	5.30e-91	260
MsG0580025504.01.T01	AT1G75600	93.382	136	9	0	1	136	1	136	1.25e-89	256
MsG0580025504.01.T01	AT1G13370	93.382	136	9	0	1	136	1	136	5.55e-89	254
MsG0580025504.01.T01	AT1G19890	89.781	137	13	1	1	136	1	137	1.07e-83	241
MsG0580025504.01.T01	AT5G12910	71.111	135	34	2	1	135	1	130	9.89e-67	198
MsG0580025504.01.T01	AT1G01370	53.982	113	49	2	24	134	63	174	2.97e-31	110
MsG0580025504.01.T01	AT1G01370	53.982	113	49	2	24	134	63	174	2.97e-31	110
MsG0580025504.01.T01	AT1G01370	53.982	113	49	2	24	134	63	174	2.97e-31	110
MsG0580025504.01.T01	AT1G01370	53.982	113	49	2	24	134	63	174	2.97e-31	110

Find 37 sgRNAs with CRISPR-Local

Find 36 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CGGTTGCCGGAGCAGATTTC+CGG	0.243304	5:-19703284	None:intergenic
TTGGTGGCTAGCTGCTTTCT+TGG	0.277587	5:-19703255	None:intergenic
TTCTTGACTCCTCCGGTTGC+CGG	0.293014	5:-19703297	None:intergenic
TCAGAAGCTCAGTGCTCTTC+TGG	0.307424	5:-19703371	None:intergenic
GCTGCTGAAGCTTATCTTGT+TGG	0.357332	5:+19703492	MsG0580025504.01.T01:CDS
GTGCAGAAACAGCGCTGCTT+TGG	0.363708	5:-19703461	None:intergenic
TCACGAAGTGCAACAGTTCC+AGG	0.377831	5:-19703336	None:intergenic
AGCAGATTTCCGGGCAGCTT+TGG	0.390197	5:-19703274	None:intergenic
CGGAAATCTGCTCCGGCAAC+CGG	0.392471	5:+19703285	MsG0580025504.01.T01:CDS
GGTTGCCGGAGCAGATTTCC+GGG	0.407337	5:-19703283	None:intergenic
CTTTCTTGGTGCCTTTCCTC+CGG	0.425692	5:-19703241	None:intergenic
TTATCTTGTTGGTTTGTTTG+AGG	0.428809	5:+19703503	MsG0580025504.01.T01:CDS
CGATTTCACGAACAAGTCTC+TGG	0.432729	5:-19703410	None:intergenic
AGATTTCCGGGCAGCTTTGG+TGG	0.468887	5:-19703271	None:intergenic
AAACAGCGCTGCTTTGGAAT+CGG	0.473836	5:-19703455	None:intergenic
AGCTAGCCACCAAAGCTGCC+CGG	0.491500	5:+19703265	MsG0580025504.01.T01:CDS
CGAGCGAGTTGAATATCCTT+AGG	0.499677	5:-19703570	None:intergenic
GTGTGGCTTCTTGACTCCTC+CGG	0.501667	5:-19703304	None:intergenic
AGCTGCCCGGAAATCTGCTC+CGG	0.505877	5:+19703278	MsG0580025504.01.T01:CDS
AGTAACTCTCTTAGCATGAA+TGG	0.521941	5:-19703541	None:intergenic
AGAGCACTGAGCTTCTGATA+AGG	0.531497	5:+19703376	MsG0580025504.01.T01:CDS
TCGCAAATCCACCGGAGGAA+AGG	0.532804	5:+19703230	MsG0580025504.01.T01:CDS
TGTTTGCTTTGTACGAGCCA+TGG	0.537743	5:-19703205	None:intergenic
GAGAGTTACTATCATGCCTA+AGG	0.550012	5:+19703554	MsG0580025504.01.T01:CDS
ACTTGTTCGTGAAATCGCTC+AGG	0.551065	5:+19703416	MsG0580025504.01.T01:CDS
CAACTCGCTCGCAGAATCAG+AGG	0.556058	5:+19703582	MsG0580025504.01.T01:CDS
TCTTGGTGCCTTTCCTCCGG+TGG	0.556160	5:-19703238	None:intergenic
CAGTGCTCTTCTGGTACTTG+CGG	0.579006	5:-19703362	None:intergenic
TCGCAGAATCAGAGGCGAGA+GGG	0.584947	5:+19703590	MsG0580025504.01.T01:CDS
CAAACAGCTCGCAAATCCAC+CGG	0.586123	5:+19703222	MsG0580025504.01.T01:CDS
TCACGAACAAGTCTCTGGAA+TGG	0.590006	5:-19703405	None:intergenic
CTCGCAGAATCAGAGGCGAG+AGG	0.599896	5:+19703589	MsG0580025504.01.T01:CDS
AAATCTGCTCCGGCAACCGG+AGG	0.607496	5:+19703288	MsG0580025504.01.T01:CDS
AAGCCACACAGATTCCGTCC+TGG	0.622196	5:+19703318	MsG0580025504.01.T01:CDS
GAAGTGCAACAGTTCCAGGA+CGG	0.690156	5:-19703332	None:intergenic
GTTCCAGGACGGAATCTGTG+TGG	0.699556	5:-19703321	None:intergenic
ACAGCTCGCAAATCCACCGG+AGG	0.704783	5:+19703225	MsG0580025504.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TTATCTTGTTGGTTTGTTTG+AGG	+	Chr5:19703503-19703522	MsG0580025504.01.T01:CDS	30.0%
	AGTAACTCTCTTAGCATGAA+TGG	-	Chr5:19703544-19703563	None:intergenic	35.0%
	GAGAGTTACTATCATGCCTA+AGG	+	Chr5:19703554-19703573	MsG0580025504.01.T01:CDS	40.0%
	ACTTGTTCGTGAAATCGCTC+AGG	+	Chr5:19703416-19703435	MsG0580025504.01.T01:CDS	45.0%
	CGATTTCACGAACAAGTCTC+TGG	-	Chr5:19703413-19703432	None:intergenic	45.0%
	GCTGCTGAAGCTTATCTTGT+TGG	+	Chr5:19703492-19703511	MsG0580025504.01.T01:CDS	45.0%
!	CGAGCGAGTTGAATATCCTT+AGG	-	Chr5:19703573-19703592	None:intergenic	45.0%
!	TCACGAACAAGTCTCTGGAA+TGG	-	Chr5:19703408-19703427	None:intergenic	45.0%
!!	AAACAGCGCTGCTTTGGAAT+CGG	-	Chr5:19703458-19703477	None:intergenic	45.0%
!!	AGAGCACTGAGCTTCTGATA+AGG	+	Chr5:19703376-19703395	MsG0580025504.01.T01:CDS	45.0%
	CAAACAGCTCGCAAATCCAC+CGG	+	Chr5:19703222-19703241	MsG0580025504.01.T01:CDS	50.0%
	CAGTGCTCTTCTGGTACTTG+CGG	-	Chr5:19703365-19703384	None:intergenic	50.0%
	GAAGTGCAACAGTTCCAGGA+CGG	-	Chr5:19703335-19703354	None:intergenic	50.0%
	TCACGAAGTGCAACAGTTCC+AGG	-	Chr5:19703339-19703358	None:intergenic	50.0%
	TCAGAAGCTCAGTGCTCTTC+TGG	-	Chr5:19703374-19703393	None:intergenic	50.0%
!	TTGGTGGCTAGCTGCTTTCT+TGG	-	Chr5:19703258-19703277	None:intergenic	50.0%
!!	CTTTCTTGGTGCCTTTCCTC+CGG	-	Chr5:19703244-19703263	None:intergenic	50.0%
	AAGCCACACAGATTCCGTCC+TGG	+	Chr5:19703318-19703337	MsG0580025504.01.T01:CDS	55.0%
	AGCAGATTTCCGGGCAGCTT+TGG	-	Chr5:19703277-19703296	None:intergenic	55.0%
	CAACTCGCTCGCAGAATCAG+AGG	+	Chr5:19703582-19703601	MsG0580025504.01.T01:CDS	55.0%
	GTGCAGAAACAGCGCTGCTT+TGG	-	Chr5:19703464-19703483	None:intergenic	55.0%
	GTGTGGCTTCTTGACTCCTC+CGG	-	Chr5:19703307-19703326	None:intergenic	55.0%
	GTTCCAGGACGGAATCTGTG+TGG	-	Chr5:19703324-19703343	None:intergenic	55.0%
	TCGCAAATCCACCGGAGGAA+AGG	+	Chr5:19703230-19703249	MsG0580025504.01.T01:CDS	55.0%
	TCGCAGAATCAGAGGCGAGA+GGG	+	Chr5:19703590-19703609	MsG0580025504.01.T01:CDS	55.0%
	TTCTTGACTCCTCCGGTTGC+CGG	-	Chr5:19703300-19703319	None:intergenic	55.0%
!	AGATTTCCGGGCAGCTTTGG+TGG	-	Chr5:19703274-19703293	None:intergenic	55.0%
	AAATCTGCTCCGGCAACCGG+AGG	+	Chr5:19703288-19703307	MsG0580025504.01.T01:CDS	60.0%
	ACAGCTCGCAAATCCACCGG+AGG	+	Chr5:19703225-19703244	MsG0580025504.01.T01:CDS	60.0%
	AGCTAGCCACCAAAGCTGCC+CGG	+	Chr5:19703265-19703284	MsG0580025504.01.T01:CDS	60.0%
	AGCTGCCCGGAAATCTGCTC+CGG	+	Chr5:19703278-19703297	MsG0580025504.01.T01:CDS	60.0%
	CGGAAATCTGCTCCGGCAAC+CGG	+	Chr5:19703285-19703304	MsG0580025504.01.T01:CDS	60.0%
	CGGTTGCCGGAGCAGATTTC+CGG	-	Chr5:19703287-19703306	None:intergenic	60.0%
	CTCGCAGAATCAGAGGCGAG+AGG	+	Chr5:19703589-19703608	MsG0580025504.01.T01:CDS	60.0%
	GGTTGCCGGAGCAGATTTCC+GGG	-	Chr5:19703286-19703305	None:intergenic	60.0%
!!	TCTTGGTGCCTTTCCTCCGG+TGG	-	Chr5:19703241-19703260	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
Chr5	gene	19703207	19703617	19703207	ID=MsG0580025504.01;Name=MsG0580025504.01
Chr5	mRNA	19703207	19703617	19703207	ID=MsG0580025504.01.T01;Parent=MsG0580025504.01;Name=MsG0580025504.01.T01;_AED=0.50;_eAED=0.50;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|136
Chr5	exon	19703207	19703617	19703207	ID=MsG0580025504.01.T01:exon:8300;Parent=MsG0580025504.01.T01
Chr5	CDS	19703207	19703617	19703207	ID=MsG0580025504.01.T01:cds;Parent=MsG0580025504.01.T01

Gene Sequence

>MsG0580025504.01.T01

ATGGCTCGTACAAAGCAAACAGCTCGCAAATCCACCGGAGGAAAGGCACCAAGAAAGCAGCTAGCCACCAAAGCTGCCCGGAAATCTGCTCCGGCAACCGGAGGAGTCAAGAAGCCACACAGATTCCGTCCTGGAACTGTTGCACTTCGTGAGATCCGCAAGTACCAGAAGAGCACTGAGCTTCTGATAAGGAAGCTTCCATTCCAGAGACTTGTTCGTGAAATCGCTCAGGATTTCAAAACAGATCTCCGATTCCAAAGCAGCGCTGTTTCTGCACTTCAAGAAGCTGCTGAAGCTTATCTTGTTGGTTTGTTTGAGGATACTAATCTCTGTGCCATTCATGCTAAGAGAGTTACTATCATGCCTAAGGATATTCAACTCGCTCGCAGAATCAGAGGCGAGAGGGCTTAG

Protein sequence

>MsG0580025504.01.T01

MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA*