Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007687.01.T01 | AAB41811.1 | 67.622 | 349 | 72 | 7 | 6 | 315 | 7 | 353 | 1.77E-150 | 436 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007687.01.T01 | Q9LEH3 | 56.678 | 307 | 97 | 3 | 25 | 295 | 21 | 327 | 4.71E-110 | 325 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007687.01.T01 | Q93XK6 | 84.571 | 350 | 19 | 1 | 1 | 315 | 1 | 350 | 0.0 | 579 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180001290.01 | MsG0280007687.01 | 0.830684 | 2.556453e-55 | 2.713012e-52 |
| MsG0180003504.01 | MsG0280007687.01 | 0.808868 | 2.506431e-50 | 1.449338e-47 |
| MsG0180003905.01 | MsG0280007687.01 | 0.818119 | 2.314380e-52 | 1.717229e-49 |
| MsG0180004652.01 | MsG0280007687.01 | 0.813847 | 2.080201e-51 | 1.373586e-48 |
| MsG0180004705.01 | MsG0280007687.01 | 0.817670 | 2.923771e-52 | 2.142870e-49 |
| MsG0180005655.01 | MsG0280007687.01 | 0.807386 | 5.185599e-50 | 2.884373e-47 |
| MsG0180005819.01 | MsG0280007687.01 | 0.840307 | 9.407682e-58 | 1.334505e-54 |
| MsG0280007687.01 | MsG0280007688.01 | 0.812843 | 3.456527e-51 | 2.221162e-48 |
| MsG0280007687.01 | MsG0280010906.01 | 0.822019 | 2.963724e-53 | 2.450924e-50 |
| MsG0280007687.01 | MsG0380014544.01 | 0.801167 | 1.023079e-48 | 4.852624e-46 |
| MsG0280007687.01 | MsG0380015370.01 | 0.800701 | 1.273817e-48 | 5.970722e-46 |
| MsG0280007687.01 | MsG0380015434.01 | 0.801861 | 7.373455e-49 | 3.559308e-46 |
| MsG0280007687.01 | MsG0380015656.01 | 0.808346 | 3.240355e-50 | 1.848348e-47 |
| MsG0280007687.01 | MsG0380016380.01 | -0.827314 | 1.674924e-54 | 1.611273e-51 |
| MsG0280007687.01 | MsG0380017030.01 | 0.817661 | 2.936922e-52 | 2.151968e-49 |
| MsG0280007687.01 | MsG0380017079.01 | 0.811042 | 8.534003e-51 | 5.227847e-48 |
| MsG0280007687.01 | MsG0380017596.01 | 0.802783 | 4.762478e-49 | 2.353567e-46 |
| MsG0280007687.01 | MsG0380017967.01 | 0.829098 | 6.224665e-55 | 6.307316e-52 |
| MsG0280007687.01 | MsG0480018228.01 | 0.812591 | 3.925176e-51 | 2.505796e-48 |
| MsG0280007687.01 | MsG0480021226.01 | 0.814068 | 1.859973e-51 | 1.235572e-48 |
| MsG0280007687.01 | MsG0480022682.01 | 0.802231 | 6.187853e-49 | 3.015182e-46 |
| MsG0280007687.01 | MsG0580025153.01 | -0.812445 | 4.223652e-51 | 2.686165e-48 |
| MsG0280007687.01 | MsG0580030141.01 | 0.802987 | 4.321990e-49 | 2.146841e-46 |
| MsG0280007687.01 | MsG0680033645.01 | 0.804935 | 1.700841e-49 | 8.883498e-47 |
| MsG0280007687.01 | MsG0680035905.01 | 0.807073 | 6.040207e-50 | 3.332418e-47 |
| MsG0280007687.01 | MsG0780040978.01 | 0.804293 | 2.315745e-49 | 1.189573e-46 |
| MsG0280007687.01 | MsG0880043669.01 | 0.828305 | 9.681992e-55 | 9.585625e-52 |
| MsG0280007687.01 | MsG0880045356.01 | 0.820255 | 7.552950e-53 | 5.946157e-50 |
| MsG0280007687.01 | MsG0880045439.01 | 0.842836 | 2.027552e-58 | 3.112477e-55 |
| MsG0280007687.01 | MsG0880045584.01 | 0.809398 | 1.929962e-50 | 1.131964e-47 |
| MsG0280007687.01 | MsG0880047057.01 | 0.800859 | 1.182566e-48 | 5.565710e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007687.01.T01 | MTR_2g029860 | 83.569 | 353 | 20 | 4 | 1 | 315 | 1 | 353 | 0.0 | 568 |
| MsG0280007687.01.T01 | MTR_2g029850 | 67.514 | 354 | 74 | 6 | 1 | 315 | 1 | 352 | 1.73e-156 | 441 |
| MsG0280007687.01.T01 | MTR_2g029820 | 61.798 | 356 | 94 | 5 | 1 | 315 | 1 | 355 | 3.39e-148 | 421 |
| MsG0280007687.01.T01 | MTR_2g029815 | 61.756 | 353 | 96 | 6 | 1 | 315 | 1 | 352 | 4.61e-144 | 410 |
| MsG0280007687.01.T01 | MTR_2g029910 | 63.143 | 350 | 86 | 8 | 6 | 315 | 7 | 353 | 2.50e-141 | 403 |
| MsG0280007687.01.T01 | MTR_2g029800 | 60.169 | 354 | 101 | 6 | 1 | 315 | 1 | 353 | 4.39e-140 | 400 |
| MsG0280007687.01.T01 | MTR_2g029830 | 59.714 | 350 | 99 | 4 | 6 | 313 | 4 | 353 | 1.96e-137 | 393 |
| MsG0280007687.01.T01 | MTR_2g028980 | 58.873 | 355 | 104 | 8 | 1 | 314 | 1 | 354 | 2.50e-131 | 378 |
| MsG0280007687.01.T01 | MTR_2g029750 | 57.465 | 355 | 110 | 7 | 1 | 315 | 1 | 354 | 2.50e-130 | 375 |
| MsG0280007687.01.T01 | MTR_2g029740 | 57.880 | 349 | 107 | 6 | 1 | 311 | 1 | 347 | 4.14e-129 | 372 |
| MsG0280007687.01.T01 | MTR_2g029560 | 54.023 | 348 | 120 | 5 | 1 | 313 | 1 | 343 | 2.40e-118 | 344 |
| MsG0280007687.01.T01 | MTR_2g029730 | 56.305 | 341 | 108 | 6 | 10 | 315 | 11 | 345 | 4.89e-117 | 341 |
| MsG0280007687.01.T01 | MTR_2g029830 | 60.142 | 281 | 71 | 3 | 74 | 313 | 5 | 285 | 4.19e-109 | 319 |
| MsG0280007687.01.T01 | MTR_7g093370 | 53.106 | 322 | 112 | 4 | 11 | 296 | 54 | 372 | 4.99e-109 | 322 |
| MsG0280007687.01.T01 | MTR_1g054205 | 51.682 | 327 | 121 | 4 | 6 | 296 | 2 | 327 | 1.04e-102 | 304 |
| MsG0280007687.01.T01 | MTR_5g017850 | 42.271 | 317 | 146 | 5 | 14 | 295 | 12 | 326 | 5.16e-78 | 241 |
| MsG0280007687.01.T01 | MTR_4g125940 | 43.692 | 325 | 141 | 4 | 11 | 295 | 7 | 329 | 2.83e-77 | 239 |
| MsG0280007687.01.T01 | MTR_5g021060 | 42.368 | 321 | 143 | 6 | 10 | 295 | 17 | 330 | 5.64e-77 | 238 |
| MsG0280007687.01.T01 | MTR_8g076820 | 42.715 | 302 | 137 | 4 | 29 | 295 | 30 | 330 | 3.25e-76 | 236 |
| MsG0280007687.01.T01 | MTR_5g017860 | 42.271 | 317 | 146 | 5 | 14 | 295 | 12 | 326 | 4.71e-76 | 236 |
| MsG0280007687.01.T01 | MTR_2g040000 | 41.742 | 333 | 154 | 5 | 1 | 295 | 1 | 331 | 7.10e-74 | 231 |
| MsG0280007687.01.T01 | MTR_7g072510 | 41.009 | 317 | 143 | 6 | 14 | 295 | 5 | 312 | 2.46e-73 | 229 |
| MsG0280007687.01.T01 | MTR_3g094650 | 43.243 | 333 | 140 | 8 | 1 | 295 | 1 | 322 | 2.25e-72 | 226 |
| MsG0280007687.01.T01 | MTR_4g083710 | 42.296 | 331 | 143 | 7 | 6 | 295 | 1 | 324 | 1.19e-71 | 224 |
| MsG0280007687.01.T01 | MTR_4g074995 | 44.407 | 295 | 132 | 5 | 26 | 295 | 21 | 308 | 2.21e-71 | 223 |
| MsG0280007687.01.T01 | MTR_2g084080 | 40.850 | 306 | 137 | 4 | 25 | 295 | 21 | 317 | 3.12e-71 | 223 |
| MsG0280007687.01.T01 | MTR_7g072480 | 41.956 | 317 | 137 | 6 | 14 | 295 | 12 | 316 | 1.23e-70 | 222 |
| MsG0280007687.01.T01 | MTR_4g029200 | 40.988 | 344 | 136 | 8 | 7 | 295 | 7 | 338 | 4.35e-70 | 221 |
| MsG0280007687.01.T01 | MTR_1g022970 | 41.391 | 302 | 142 | 3 | 29 | 295 | 46 | 347 | 1.66e-69 | 220 |
| MsG0280007687.01.T01 | MTR_2g084000 | 41.311 | 305 | 136 | 4 | 26 | 295 | 23 | 319 | 2.63e-69 | 218 |
| MsG0280007687.01.T01 | MTR_2g084110 | 41.368 | 307 | 134 | 5 | 25 | 295 | 21 | 317 | 4.49e-69 | 218 |
| MsG0280007687.01.T01 | MTR_4g125940 | 45.818 | 275 | 110 | 3 | 58 | 295 | 2 | 274 | 4.91e-69 | 216 |
| MsG0280007687.01.T01 | MTR_3g466200 | 40.938 | 320 | 139 | 7 | 14 | 295 | 13 | 320 | 9.28e-69 | 217 |
| MsG0280007687.01.T01 | MTR_2g084010 | 40.523 | 306 | 139 | 4 | 25 | 295 | 21 | 318 | 6.73e-68 | 215 |
| MsG0280007687.01.T01 | MTR_2g084020 | 40.196 | 306 | 140 | 4 | 25 | 295 | 21 | 318 | 8.54e-68 | 214 |
| MsG0280007687.01.T01 | MTR_4g029190 | 42.357 | 314 | 130 | 8 | 22 | 295 | 38 | 340 | 2.84e-67 | 214 |
| MsG0280007687.01.T01 | MTR_5g074970 | 39.879 | 331 | 148 | 8 | 4 | 295 | 8 | 326 | 3.45e-67 | 213 |
| MsG0280007687.01.T01 | MTR_5g083860 | 40.373 | 322 | 143 | 7 | 11 | 295 | 16 | 325 | 3.78e-67 | 213 |
| MsG0280007687.01.T01 | MTR_4g029170 | 39.752 | 322 | 146 | 6 | 11 | 295 | 11 | 321 | 5.24e-67 | 213 |
| MsG0280007687.01.T01 | MTR_3g094670 | 42.284 | 324 | 139 | 6 | 9 | 295 | 10 | 322 | 1.90e-66 | 211 |
| MsG0280007687.01.T01 | MTR_4g122640 | 39.009 | 323 | 157 | 4 | 9 | 295 | 18 | 336 | 5.55e-66 | 211 |
| MsG0280007687.01.T01 | MTR_2g029880 | 65.868 | 167 | 42 | 4 | 152 | 315 | 55 | 209 | 7.77e-66 | 206 |
| MsG0280007687.01.T01 | MTR_4g114210 | 39.062 | 320 | 149 | 8 | 16 | 295 | 7 | 320 | 1.09e-65 | 209 |
| MsG0280007687.01.T01 | MTR_3g092990 | 35.952 | 331 | 171 | 6 | 1 | 295 | 1 | 326 | 1.82e-65 | 209 |
| MsG0280007687.01.T01 | MTR_2g084090 | 39.739 | 307 | 140 | 6 | 25 | 295 | 21 | 318 | 3.95e-65 | 207 |
| MsG0280007687.01.T01 | MTR_3g094630 | 41.742 | 333 | 145 | 7 | 1 | 295 | 1 | 322 | 1.33e-64 | 206 |
| MsG0280007687.01.T01 | MTR_5g014100 | 38.614 | 303 | 147 | 3 | 32 | 295 | 29 | 331 | 2.90e-64 | 206 |
| MsG0280007687.01.T01 | MTR_5g074760 | 38.835 | 309 | 143 | 5 | 27 | 297 | 23 | 323 | 2.94e-64 | 206 |
| MsG0280007687.01.T01 | MTR_3g072190 | 39.441 | 322 | 145 | 7 | 14 | 295 | 7 | 318 | 3.03e-64 | 205 |
| MsG0280007687.01.T01 | MTR_5g074740 | 38.762 | 307 | 142 | 5 | 27 | 295 | 23 | 321 | 9.52e-64 | 204 |
| MsG0280007687.01.T01 | MTR_7g107520 | 39.333 | 300 | 145 | 5 | 29 | 295 | 25 | 320 | 5.58e-62 | 200 |
| MsG0280007687.01.T01 | MTR_4g029180 | 39.333 | 300 | 136 | 5 | 33 | 295 | 31 | 321 | 5.68e-62 | 200 |
| MsG0280007687.01.T01 | MTR_1g115900 | 37.578 | 322 | 156 | 8 | 11 | 296 | 10 | 322 | 7.96e-62 | 199 |
| MsG0280007687.01.T01 | MTR_3g467600 | 40.453 | 309 | 139 | 6 | 25 | 295 | 23 | 324 | 1.13e-61 | 199 |
| MsG0280007687.01.T01 | MTR_5g074710 | 39.739 | 307 | 139 | 7 | 27 | 295 | 23 | 321 | 2.11e-61 | 198 |
| MsG0280007687.01.T01 | MTR_1g101830 | 37.224 | 317 | 158 | 6 | 14 | 295 | 12 | 322 | 2.66e-61 | 198 |
| MsG0280007687.01.T01 | MTR_2g008710 | 38.110 | 328 | 158 | 8 | 6 | 295 | 5 | 325 | 4.55e-61 | 197 |
| MsG0280007687.01.T01 | MTR_4g074990 | 38.750 | 320 | 135 | 6 | 14 | 295 | 9 | 305 | 2.88e-60 | 195 |
| MsG0280007687.01.T01 | MTR_5g074860 | 38.125 | 320 | 151 | 7 | 14 | 295 | 15 | 325 | 1.46e-59 | 194 |
| MsG0280007687.01.T01 | MTR_4g030890 | 36.601 | 306 | 154 | 6 | 25 | 295 | 96 | 396 | 1.45e-58 | 194 |
| MsG0280007687.01.T01 | MTR_3g466180 | 36.076 | 316 | 157 | 5 | 16 | 295 | 17 | 323 | 4.30e-58 | 190 |
| MsG0280007687.01.T01 | MTR_4g046713 | 36.137 | 321 | 166 | 5 | 11 | 295 | 9 | 326 | 8.33e-58 | 189 |
| MsG0280007687.01.T01 | MTR_2g088770 | 37.662 | 308 | 151 | 7 | 25 | 295 | 22 | 325 | 8.42e-58 | 189 |
| MsG0280007687.01.T01 | MTR_4g031140 | 33.538 | 325 | 172 | 7 | 25 | 314 | 24 | 339 | 1.06e-57 | 189 |
| MsG0280007687.01.T01 | MTR_7g086820 | 36.156 | 307 | 156 | 7 | 22 | 295 | 13 | 312 | 1.86e-57 | 188 |
| MsG0280007687.01.T01 | MTR_1g086320 | 35.897 | 312 | 155 | 6 | 25 | 295 | 26 | 333 | 7.72e-57 | 187 |
| MsG0280007687.01.T01 | MTR_4g133800 | 37.710 | 297 | 141 | 7 | 34 | 295 | 46 | 333 | 3.17e-56 | 185 |
| MsG0280007687.01.T01 | MTR_5g049280 | 36.102 | 313 | 154 | 7 | 25 | 295 | 29 | 337 | 8.35e-56 | 184 |
| MsG0280007687.01.T01 | MTR_5g016010 | 36.364 | 308 | 156 | 7 | 25 | 294 | 23 | 328 | 1.51e-55 | 183 |
| MsG0280007687.01.T01 | MTR_5g074860 | 38.305 | 295 | 146 | 6 | 14 | 295 | 15 | 286 | 6.82e-55 | 180 |
| MsG0280007687.01.T01 | MTR_6g043280 | 35.882 | 340 | 152 | 9 | 11 | 295 | 4 | 332 | 6.10e-54 | 179 |
| MsG0280007687.01.T01 | MTR_1g086490 | 34.700 | 317 | 159 | 6 | 25 | 295 | 26 | 340 | 6.54e-54 | 179 |
| MsG0280007687.01.T01 | MTR_1g009750 | 37.459 | 307 | 149 | 7 | 28 | 295 | 26 | 328 | 1.10e-53 | 179 |
| MsG0280007687.01.T01 | MTR_6g043240 | 38.871 | 319 | 145 | 8 | 29 | 311 | 42 | 346 | 2.09e-53 | 178 |
| MsG0280007687.01.T01 | MTR_5g022870 | 34.921 | 315 | 162 | 9 | 16 | 295 | 10 | 316 | 3.16e-53 | 177 |
| MsG0280007687.01.T01 | MTR_4g074980 | 37.855 | 317 | 129 | 9 | 14 | 295 | 11 | 294 | 3.92e-53 | 176 |
| MsG0280007687.01.T01 | MTR_3g092990 | 33.837 | 331 | 167 | 7 | 1 | 295 | 1 | 315 | 5.22e-53 | 176 |
| MsG0280007687.01.T01 | MTR_2g437770 | 36.667 | 300 | 145 | 8 | 32 | 296 | 53 | 342 | 8.42e-53 | 177 |
| MsG0280007687.01.T01 | MTR_4g132490 | 35.625 | 320 | 160 | 7 | 17 | 295 | 13 | 327 | 1.30e-52 | 176 |
| MsG0280007687.01.T01 | MTR_1g090760 | 33.945 | 327 | 164 | 8 | 14 | 295 | 11 | 330 | 2.54e-52 | 175 |
| MsG0280007687.01.T01 | MTR_0155s0040 | 34.426 | 305 | 152 | 8 | 26 | 295 | 24 | 315 | 1.49e-51 | 172 |
| MsG0280007687.01.T01 | MTR_2g099175 | 33.546 | 313 | 159 | 6 | 24 | 295 | 31 | 335 | 6.63e-51 | 171 |
| MsG0280007687.01.T01 | MTR_8g075100 | 36.093 | 302 | 150 | 9 | 29 | 295 | 26 | 319 | 3.51e-50 | 169 |
| MsG0280007687.01.T01 | MTR_1g077000 | 33.775 | 302 | 152 | 7 | 29 | 295 | 39 | 327 | 3.75e-50 | 169 |
| MsG0280007687.01.T01 | MTR_6g027440 | 35.647 | 317 | 159 | 8 | 14 | 295 | 8 | 314 | 6.51e-50 | 168 |
| MsG0280007687.01.T01 | MTR_4g095450 | 36.218 | 312 | 153 | 8 | 22 | 294 | 19 | 323 | 1.56e-49 | 167 |
| MsG0280007687.01.T01 | MTR_4g127670 | 36.601 | 306 | 151 | 7 | 28 | 295 | 23 | 323 | 3.01e-49 | 167 |
| MsG0280007687.01.T01 | MTR_1g009750 | 37.024 | 289 | 158 | 7 | 28 | 295 | 26 | 311 | 3.39e-49 | 166 |
| MsG0280007687.01.T01 | MTR_4g087965 | 35.410 | 305 | 155 | 8 | 28 | 292 | 41 | 343 | 7.04e-49 | 166 |
| MsG0280007687.01.T01 | MTR_3g105790 | 36.601 | 306 | 151 | 7 | 27 | 295 | 23 | 322 | 7.17e-49 | 166 |
| MsG0280007687.01.T01 | MTR_1g038680 | 34.768 | 302 | 156 | 6 | 33 | 295 | 33 | 332 | 3.88e-48 | 164 |
| MsG0280007687.01.T01 | MTR_6g043460 | 36.656 | 311 | 151 | 8 | 29 | 303 | 36 | 336 | 9.86e-48 | 164 |
| MsG0280007687.01.T01 | MTR_4g074980 | 38.400 | 250 | 109 | 5 | 14 | 225 | 11 | 253 | 1.65e-47 | 160 |
| MsG0280007687.01.T01 | MTR_8g062780 | 33.654 | 312 | 164 | 7 | 23 | 295 | 17 | 324 | 3.36e-47 | 162 |
| MsG0280007687.01.T01 | MTR_7g086870 | 35.974 | 303 | 145 | 10 | 29 | 295 | 22 | 311 | 3.82e-47 | 161 |
| MsG0280007687.01.T01 | MTR_7g026990 | 33.654 | 312 | 161 | 7 | 21 | 296 | 22 | 323 | 5.66e-47 | 161 |
| MsG0280007687.01.T01 | MTR_3g072190 | 38.996 | 259 | 114 | 5 | 72 | 295 | 2 | 251 | 5.78e-47 | 159 |
| MsG0280007687.01.T01 | MTR_1g025980 | 33.648 | 318 | 169 | 7 | 14 | 295 | 7 | 318 | 6.66e-47 | 160 |
| MsG0280007687.01.T01 | MTR_7g029030 | 34.853 | 307 | 151 | 8 | 28 | 295 | 24 | 320 | 1.73e-46 | 159 |
| MsG0280007687.01.T01 | MTR_2g067440 | 31.054 | 351 | 162 | 9 | 18 | 294 | 42 | 386 | 5.98e-46 | 160 |
| MsG0280007687.01.T01 | MTR_5g033470 | 32.063 | 315 | 166 | 9 | 24 | 295 | 68 | 377 | 8.31e-46 | 159 |
| MsG0280007687.01.T01 | MTR_2g008160 | 34.516 | 310 | 158 | 8 | 25 | 295 | 20 | 323 | 2.79e-44 | 154 |
| MsG0280007687.01.T01 | MTR_2g078610 | 31.138 | 334 | 158 | 10 | 29 | 294 | 76 | 405 | 8.36e-43 | 152 |
| MsG0280007687.01.T01 | MTR_2g077990 | 30.838 | 334 | 159 | 9 | 29 | 294 | 76 | 405 | 9.38e-43 | 152 |
| MsG0280007687.01.T01 | MTR_2g008730 | 34.884 | 301 | 128 | 6 | 33 | 295 | 31 | 301 | 9.03e-42 | 147 |
| MsG0280007687.01.T01 | MTR_1g066710 | 31.613 | 310 | 166 | 7 | 26 | 297 | 24 | 325 | 5.75e-40 | 142 |
| MsG0280007687.01.T01 | MTR_0147s0010 | 30.556 | 324 | 154 | 8 | 26 | 294 | 74 | 381 | 1.76e-39 | 143 |
| MsG0280007687.01.T01 | MTR_2g078280 | 31.153 | 321 | 149 | 9 | 29 | 281 | 76 | 392 | 1.76e-38 | 140 |
| MsG0280007687.01.T01 | MTR_1g066680 | 31.731 | 312 | 162 | 8 | 26 | 297 | 24 | 324 | 4.14e-38 | 138 |
| MsG0280007687.01.T01 | MTR_1g066640 | 31.613 | 310 | 166 | 6 | 26 | 297 | 24 | 325 | 2.49e-37 | 135 |
| MsG0280007687.01.T01 | MTR_1g066380 | 30.744 | 309 | 168 | 6 | 27 | 297 | 25 | 325 | 8.76e-37 | 134 |
| MsG0280007687.01.T01 | MTR_2g067450 | 32.026 | 306 | 161 | 8 | 29 | 294 | 11 | 309 | 1.20e-36 | 134 |
| MsG0280007687.01.T01 | MTR_2g008160 | 34.155 | 284 | 159 | 9 | 25 | 295 | 20 | 288 | 3.40e-36 | 132 |
| MsG0280007687.01.T01 | MTR_0286s0010 | 31.464 | 321 | 176 | 9 | 14 | 295 | 19 | 334 | 5.94e-36 | 132 |
| MsG0280007687.01.T01 | MTR_6g008075 | 31.464 | 321 | 176 | 9 | 14 | 295 | 19 | 334 | 5.94e-36 | 132 |
| MsG0280007687.01.T01 | MTR_4g132110 | 29.697 | 330 | 185 | 8 | 4 | 295 | 8 | 328 | 9.89e-36 | 132 |
| MsG0280007687.01.T01 | MTR_4g132110 | 28.657 | 335 | 187 | 8 | 4 | 295 | 8 | 333 | 2.68e-35 | 130 |
| MsG0280007687.01.T01 | MTR_3g072260 | 48.837 | 129 | 62 | 1 | 9 | 133 | 2 | 130 | 7.00e-35 | 124 |
| MsG0280007687.01.T01 | MTR_7g072490 | 38.288 | 222 | 93 | 4 | 75 | 288 | 2 | 187 | 8.52e-33 | 120 |
| MsG0280007687.01.T01 | MTR_3g105790 | 35.391 | 243 | 117 | 6 | 90 | 295 | 7 | 246 | 3.39e-31 | 117 |
| MsG0280007687.01.T01 | MTR_1g066380 | 31.939 | 263 | 133 | 6 | 73 | 297 | 3 | 257 | 6.91e-29 | 112 |
| MsG0280007687.01.T01 | MTR_2g029930 | 53.982 | 113 | 23 | 4 | 15 | 112 | 4 | 102 | 7.54e-29 | 107 |
| MsG0280007687.01.T01 | MTR_5g074700 | 31.034 | 232 | 100 | 6 | 102 | 295 | 5 | 214 | 4.26e-24 | 98.2 |
| MsG0280007687.01.T01 | MTR_2g008160 | 44.037 | 109 | 58 | 2 | 25 | 133 | 20 | 125 | 1.82e-23 | 95.9 |
| MsG0280007687.01.T01 | MTR_1g098320 | 48.864 | 88 | 43 | 1 | 216 | 303 | 47 | 132 | 3.37e-21 | 88.2 |
| MsG0280007687.01.T01 | MTR_3g072210 | 40.426 | 141 | 75 | 4 | 156 | 295 | 106 | 238 | 3.53e-21 | 90.9 |
| MsG0280007687.01.T01 | MTR_5g058120 | 36.047 | 172 | 94 | 4 | 142 | 310 | 16 | 174 | 1.12e-19 | 87.0 |
| MsG0280007687.01.T01 | MTR_3g462850 | 36.806 | 144 | 80 | 6 | 159 | 295 | 10 | 149 | 3.60e-19 | 82.8 |
| MsG0280007687.01.T01 | MTR_4g114220 | 43.564 | 101 | 47 | 2 | 55 | 155 | 29 | 119 | 3.07e-18 | 80.1 |
| MsG0280007687.01.T01 | MTR_1g089005 | 38.889 | 126 | 62 | 4 | 16 | 133 | 6 | 124 | 7.94e-17 | 76.6 |
| MsG0280007687.01.T01 | MTR_4g012865 | 46.479 | 71 | 38 | 0 | 26 | 96 | 74 | 144 | 5.29e-16 | 74.3 |
| MsG0280007687.01.T01 | MTR_6g048160 | 53.030 | 66 | 27 | 2 | 68 | 133 | 22 | 83 | 6.44e-16 | 72.4 |
| MsG0280007687.01.T01 | MTR_5g074770 | 42.529 | 87 | 49 | 1 | 208 | 294 | 23 | 108 | 4.74e-15 | 70.5 |
| MsG0280007687.01.T01 | MTR_7g107500 | 44.444 | 99 | 51 | 3 | 197 | 295 | 3 | 97 | 5.54e-15 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007687.01.T01 | AT5G06730 | 53.871 | 310 | 108 | 2 | 25 | 299 | 29 | 338 | 4.71e-107 | 316 |
| MsG0280007687.01.T01 | AT5G06720 | 53.420 | 307 | 108 | 2 | 25 | 296 | 28 | 334 | 1.85e-104 | 309 |
| MsG0280007687.01.T01 | AT2G38380 | 43.750 | 352 | 153 | 3 | 4 | 314 | 1 | 348 | 1.86e-96 | 289 |
| MsG0280007687.01.T01 | AT3G32980 | 47.910 | 311 | 125 | 2 | 25 | 298 | 27 | 337 | 4.19e-96 | 288 |
| MsG0280007687.01.T01 | AT2G38390 | 43.750 | 352 | 153 | 3 | 4 | 314 | 1 | 348 | 6.63e-96 | 288 |
| MsG0280007687.01.T01 | AT3G49120 | 47.436 | 312 | 127 | 2 | 24 | 298 | 27 | 338 | 3.89e-93 | 281 |
| MsG0280007687.01.T01 | AT3G49110 | 47.115 | 312 | 128 | 2 | 24 | 298 | 28 | 339 | 4.88e-93 | 280 |
| MsG0280007687.01.T01 | AT4G08770 | 44.648 | 327 | 141 | 3 | 22 | 311 | 17 | 340 | 1.20e-91 | 276 |
| MsG0280007687.01.T01 | AT4G08780 | 44.688 | 320 | 140 | 4 | 22 | 304 | 17 | 336 | 9.56e-90 | 272 |
| MsG0280007687.01.T01 | AT5G19880 | 44.545 | 330 | 144 | 5 | 4 | 295 | 1 | 329 | 2.57e-87 | 265 |
| MsG0280007687.01.T01 | AT2G18140 | 43.046 | 302 | 136 | 4 | 29 | 295 | 35 | 335 | 1.07e-76 | 238 |
| MsG0280007687.01.T01 | AT5G66390 | 41.587 | 315 | 148 | 4 | 16 | 295 | 20 | 333 | 2.60e-76 | 237 |
| MsG0280007687.01.T01 | AT1G44970 | 44.872 | 312 | 135 | 5 | 19 | 295 | 37 | 346 | 4.16e-76 | 237 |
| MsG0280007687.01.T01 | AT3G50990 | 43.831 | 308 | 137 | 5 | 25 | 297 | 37 | 343 | 2.63e-75 | 235 |
| MsG0280007687.01.T01 | AT5G19890 | 43.607 | 305 | 131 | 4 | 27 | 295 | 28 | 327 | 2.78e-75 | 234 |
| MsG0280007687.01.T01 | AT2G18150 | 43.046 | 302 | 136 | 4 | 29 | 295 | 36 | 336 | 4.21e-75 | 234 |
| MsG0280007687.01.T01 | AT1G14550 | 40.498 | 321 | 148 | 5 | 11 | 295 | 8 | 321 | 6.45e-71 | 223 |
| MsG0280007687.01.T01 | AT4G36430 | 40.594 | 303 | 144 | 3 | 28 | 295 | 29 | 330 | 7.05e-71 | 223 |
| MsG0280007687.01.T01 | AT1G14540 | 41.325 | 317 | 144 | 6 | 14 | 295 | 6 | 315 | 4.03e-70 | 221 |
| MsG0280007687.01.T01 | AT4G16270 | 41.584 | 303 | 137 | 6 | 29 | 295 | 50 | 348 | 5.17e-70 | 221 |
| MsG0280007687.01.T01 | AT5G05340 | 42.810 | 306 | 129 | 6 | 27 | 295 | 28 | 324 | 5.88e-68 | 215 |
| MsG0280007687.01.T01 | AT2G41480 | 35.928 | 334 | 166 | 6 | 4 | 295 | 1 | 328 | 4.86e-63 | 202 |
| MsG0280007687.01.T01 | AT1G49570 | 39.274 | 303 | 144 | 5 | 27 | 291 | 46 | 346 | 5.52e-63 | 203 |
| MsG0280007687.01.T01 | AT5G58400 | 37.963 | 324 | 153 | 5 | 10 | 295 | 12 | 325 | 3.24e-62 | 201 |
| MsG0280007687.01.T01 | AT2G35380 | 39.404 | 302 | 144 | 4 | 33 | 295 | 34 | 335 | 1.52e-60 | 196 |
| MsG0280007687.01.T01 | AT1G68850 | 36.422 | 313 | 158 | 7 | 23 | 295 | 24 | 335 | 2.34e-60 | 196 |
| MsG0280007687.01.T01 | AT5G64120 | 38.436 | 307 | 146 | 8 | 23 | 295 | 31 | 328 | 3.10e-59 | 193 |
| MsG0280007687.01.T01 | AT2G22420 | 35.647 | 317 | 164 | 5 | 14 | 295 | 8 | 319 | 5.22e-59 | 192 |
| MsG0280007687.01.T01 | AT5G51890 | 35.780 | 327 | 170 | 8 | 4 | 295 | 1 | 322 | 1.63e-58 | 191 |
| MsG0280007687.01.T01 | AT5G58390 | 39.159 | 309 | 141 | 7 | 25 | 295 | 17 | 316 | 6.70e-58 | 189 |
| MsG0280007687.01.T01 | AT4G11290 | 36.364 | 319 | 164 | 5 | 14 | 295 | 10 | 326 | 1.37e-57 | 189 |
| MsG0280007687.01.T01 | AT3G03670 | 35.331 | 317 | 167 | 4 | 14 | 295 | 8 | 321 | 3.53e-57 | 187 |
| MsG0280007687.01.T01 | AT5G17820 | 35.669 | 314 | 159 | 7 | 15 | 295 | 10 | 313 | 5.76e-57 | 187 |
| MsG0280007687.01.T01 | AT5G39580 | 38.926 | 298 | 140 | 6 | 33 | 295 | 29 | 319 | 7.32e-57 | 186 |
| MsG0280007687.01.T01 | AT1G71695 | 38.762 | 307 | 143 | 6 | 29 | 298 | 44 | 342 | 1.04e-56 | 187 |
| MsG0280007687.01.T01 | AT5G64110 | 39.667 | 300 | 137 | 8 | 33 | 295 | 38 | 330 | 2.88e-56 | 185 |
| MsG0280007687.01.T01 | AT3G21770 | 36.656 | 311 | 156 | 8 | 18 | 291 | 18 | 324 | 3.47e-56 | 185 |
| MsG0280007687.01.T01 | AT5G17820 | 35.669 | 314 | 159 | 7 | 15 | 295 | 63 | 366 | 5.57e-56 | 186 |
| MsG0280007687.01.T01 | AT4G30170 | 37.662 | 308 | 148 | 6 | 26 | 295 | 24 | 325 | 1.01e-55 | 184 |
| MsG0280007687.01.T01 | AT4G37530 | 37.061 | 313 | 157 | 6 | 21 | 295 | 19 | 329 | 2.24e-55 | 183 |
| MsG0280007687.01.T01 | AT3G01190 | 35.647 | 317 | 164 | 8 | 13 | 295 | 11 | 321 | 5.81e-55 | 182 |
| MsG0280007687.01.T01 | AT5G14130 | 37.304 | 319 | 154 | 7 | 16 | 295 | 19 | 330 | 7.46e-55 | 182 |
| MsG0280007687.01.T01 | AT5G14130 | 37.304 | 319 | 154 | 7 | 16 | 295 | 60 | 371 | 1.76e-54 | 182 |
| MsG0280007687.01.T01 | AT2G18980 | 37.662 | 308 | 146 | 7 | 27 | 295 | 23 | 323 | 3.55e-54 | 180 |
| MsG0280007687.01.T01 | AT1G05260 | 35.647 | 317 | 163 | 7 | 16 | 295 | 13 | 325 | 3.88e-54 | 180 |
| MsG0280007687.01.T01 | AT5G15180 | 32.317 | 328 | 182 | 6 | 4 | 295 | 6 | 329 | 4.05e-53 | 177 |
| MsG0280007687.01.T01 | AT4G25980 | 35.161 | 310 | 157 | 6 | 25 | 295 | 22 | 326 | 1.44e-52 | 176 |
| MsG0280007687.01.T01 | AT2G24800 | 36.688 | 308 | 149 | 8 | 27 | 295 | 29 | 329 | 3.02e-52 | 175 |
| MsG0280007687.01.T01 | AT4G33420 | 34.906 | 318 | 159 | 7 | 14 | 295 | 20 | 325 | 7.35e-52 | 174 |
| MsG0280007687.01.T01 | AT4G33420 | 34.906 | 318 | 159 | 7 | 14 | 295 | 67 | 372 | 2.23e-51 | 174 |
| MsG0280007687.01.T01 | AT5G67400 | 35.275 | 309 | 160 | 6 | 25 | 295 | 23 | 329 | 3.67e-51 | 172 |
| MsG0280007687.01.T01 | AT4G37520 | 36.513 | 304 | 156 | 7 | 27 | 295 | 25 | 326 | 4.12e-51 | 172 |
| MsG0280007687.01.T01 | AT4G37520 | 35.831 | 307 | 157 | 5 | 27 | 295 | 25 | 329 | 5.94e-51 | 171 |
| MsG0280007687.01.T01 | AT4G31760 | 33.542 | 319 | 167 | 7 | 15 | 295 | 15 | 326 | 6.11e-51 | 171 |
| MsG0280007687.01.T01 | AT2G39040 | 36.452 | 310 | 151 | 8 | 28 | 295 | 45 | 350 | 1.08e-50 | 171 |
| MsG0280007687.01.T01 | AT5G42180 | 34.177 | 316 | 166 | 8 | 14 | 294 | 8 | 316 | 9.02e-50 | 168 |
| MsG0280007687.01.T01 | AT1G05240 | 34.098 | 305 | 150 | 8 | 29 | 291 | 26 | 321 | 3.05e-49 | 167 |
| MsG0280007687.01.T01 | AT1G05250 | 34.098 | 305 | 150 | 8 | 29 | 291 | 26 | 321 | 3.05e-49 | 167 |
| MsG0280007687.01.T01 | AT3G49960 | 33.657 | 309 | 165 | 5 | 25 | 295 | 23 | 329 | 7.03e-49 | 166 |
| MsG0280007687.01.T01 | AT5G64100 | 37.124 | 299 | 144 | 10 | 33 | 295 | 41 | 331 | 1.68e-48 | 165 |
| MsG0280007687.01.T01 | AT5G22410 | 34.416 | 308 | 157 | 9 | 28 | 297 | 27 | 327 | 3.31e-48 | 164 |
| MsG0280007687.01.T01 | AT5G24070 | 34.768 | 302 | 147 | 8 | 37 | 297 | 45 | 337 | 4.05e-48 | 164 |
| MsG0280007687.01.T01 | AT1G77100 | 33.981 | 309 | 159 | 6 | 24 | 295 | 19 | 319 | 9.99e-48 | 163 |
| MsG0280007687.01.T01 | AT1G34510 | 34.375 | 320 | 163 | 8 | 10 | 295 | 3 | 309 | 3.14e-47 | 161 |
| MsG0280007687.01.T01 | AT4G33870 | 30.330 | 333 | 153 | 7 | 33 | 292 | 72 | 398 | 4.25e-47 | 163 |
| MsG0280007687.01.T01 | AT3G28200 | 34.740 | 308 | 156 | 8 | 25 | 295 | 17 | 316 | 1.37e-46 | 160 |
| MsG0280007687.01.T01 | AT1G30870 | 32.673 | 303 | 158 | 8 | 33 | 298 | 55 | 348 | 1.70e-46 | 160 |
| MsG0280007687.01.T01 | AT4G17690 | 34.091 | 308 | 151 | 9 | 29 | 295 | 26 | 322 | 5.46e-46 | 159 |
| MsG0280007687.01.T01 | AT4G26010 | 33.542 | 319 | 159 | 8 | 14 | 295 | 7 | 309 | 1.29e-45 | 157 |
| MsG0280007687.01.T01 | AT2G34060 | 33.441 | 311 | 163 | 9 | 23 | 292 | 36 | 343 | 1.74e-45 | 158 |
| MsG0280007687.01.T01 | AT4G26010 | 33.542 | 319 | 159 | 8 | 14 | 295 | 35 | 337 | 2.22e-45 | 157 |
| MsG0280007687.01.T01 | AT1G24110 | 34.568 | 324 | 170 | 10 | 10 | 295 | 3 | 322 | 2.39e-45 | 157 |
| MsG0280007687.01.T01 | AT5G40150 | 34.416 | 308 | 158 | 8 | 25 | 295 | 28 | 328 | 5.47e-44 | 153 |
| MsG0280007687.01.T01 | AT2G43480 | 32.484 | 314 | 160 | 10 | 25 | 295 | 31 | 335 | 2.75e-43 | 152 |
| MsG0280007687.01.T01 | AT5G47000 | 32.903 | 310 | 157 | 9 | 27 | 295 | 31 | 330 | 1.04e-42 | 150 |
| MsG0280007687.01.T01 | AT4G37530 | 35.249 | 261 | 131 | 5 | 21 | 243 | 19 | 279 | 1.01e-40 | 144 |
| MsG0280007687.01.T01 | AT2G35380 | 37.652 | 247 | 115 | 4 | 88 | 295 | 1 | 247 | 6.00e-40 | 140 |
| MsG0280007687.01.T01 | AT4G21960 | 31.353 | 303 | 162 | 7 | 33 | 297 | 35 | 329 | 3.53e-38 | 138 |
| MsG0280007687.01.T01 | AT2G37130 | 31.392 | 309 | 165 | 7 | 26 | 295 | 27 | 327 | 2.96e-37 | 135 |
| MsG0280007687.01.T01 | AT2G37130 | 31.457 | 302 | 160 | 7 | 33 | 295 | 3 | 296 | 4.96e-36 | 132 |
| MsG0280007687.01.T01 | AT3G17070 | 30.990 | 313 | 165 | 7 | 26 | 295 | 35 | 339 | 7.25e-35 | 129 |
| MsG0280007687.01.T01 | AT4G25980 | 45.872 | 109 | 56 | 2 | 25 | 133 | 67 | 172 | 2.44e-26 | 105 |
| MsG0280007687.01.T01 | AT2G24800 | 46.729 | 107 | 53 | 1 | 27 | 133 | 29 | 131 | 5.29e-25 | 101 |
| MsG0280007687.01.T01 | AT5G39580 | 48.113 | 106 | 51 | 2 | 33 | 138 | 29 | 130 | 3.21e-23 | 96.3 |
| MsG0280007687.01.T01 | AT3G17070 | 29.104 | 268 | 138 | 8 | 71 | 295 | 18 | 276 | 7.66e-21 | 90.5 |
Find 69 sgRNAs with CRISPR-Local
Find 253 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAACAAGCCATTTCCAATT+TGG | 0.173083 | 2:-19215264 | None:intergenic |
| CCTCTTATGGAGTTGTTATT+TGG | 0.195833 | 2:-19212199 | None:intergenic |
| CTTTCACGAAGTTGCGATTT+TGG | 0.200541 | 2:-19213116 | None:intergenic |
| ACTTTGACACAAATATTATT+AGG | 0.225975 | 2:-19215650 | None:intergenic |
| TATCACATCCAAACCTCTTA+TGG | 0.249480 | 2:-19212212 | None:intergenic |
| AAAGAAGAGAGTTTGATTAT+TGG | 0.249991 | 2:-19215350 | None:intergenic |
| GCTGTGAATGGTAATTCTTC+TGG | 0.287166 | 2:+19215457 | MsG0280007687.01.T01:CDS |
| TACTACTCCAATCTCCAAAT+TGG | 0.298047 | 2:+19215250 | MsG0280007687.01.T01:CDS |
| TGTATGGTGTTTGTGCTAAT+TGG | 0.305051 | 2:+19211673 | MsG0280007687.01.T01:CDS |
| CTTGTTCTTCAAAGTTGATC+AGG | 0.325089 | 2:+19215613 | MsG0280007687.01.T01:three_prime_UTR |
| GCCATTTCCAATTTGGAGAT+TGG | 0.328456 | 2:-19215257 | None:intergenic |
| GATGAGACTACCAAGCATTC+TGG | 0.329991 | 2:-19211806 | None:intergenic |
| GCTAGCCATTCCATCTTCTT+TGG | 0.330663 | 2:-19215497 | None:intergenic |
| CTTTGACACAAATATTATTA+GGG | 0.342592 | 2:-19215649 | None:intergenic |
| TTGGAGATTGGAGTAGTAGT+TGG | 0.363452 | 2:-19215245 | None:intergenic |
| ATCGCAACTTCGTGAAAGTC+AGG | 0.390202 | 2:+19213121 | MsG0280007687.01.T01:CDS |
| TGCTTGCAATGTTTGTAAAT+AGG | 0.391770 | 2:-19215152 | None:intergenic |
| TTTGTACCAGGTCCACCATT+AGG | 0.400215 | 2:-19215181 | None:intergenic |
| ATCTAGTTGTGCATTTGAAA+AGG | 0.401167 | 2:-19211704 | None:intergenic |
| CCAAATAACAACTCCATAAG+AGG | 0.401483 | 2:+19212199 | MsG0280007687.01.T01:CDS |
| ACTGCTATTAAGGCTCTGTT+TGG | 0.403746 | 2:+19213152 | MsG0280007687.01.T01:CDS |
| TCCAATCTCCAAATTGGAAA+TGG | 0.409054 | 2:+19215256 | MsG0280007687.01.T01:CDS |
| TAACAACTCCATAAGAGGTT+TGG | 0.417571 | 2:+19212204 | MsG0280007687.01.T01:CDS |
| TGGTACAAACCTAACCGATT+TGG | 0.423311 | 2:+19215195 | MsG0280007687.01.T01:CDS |
| ATGAGACTACCAAGCATTCT+GGG | 0.442784 | 2:-19211805 | None:intergenic |
| TCAAATGTGTCTGGTGTGGT+TGG | 0.447339 | 2:-19215220 | None:intergenic |
| AATAGTGTCAGAACCATTTG+TGG | 0.449041 | 2:-19215308 | None:intergenic |
| GAATGCTTGGTAGTCTCATC+AGG | 0.457687 | 2:+19211809 | MsG0280007687.01.T01:CDS |
| TTGCAAGCACTATGTCCTAA+TGG | 0.458887 | 2:+19215166 | MsG0280007687.01.T01:CDS |
| TGGTTGGGTCCAAATCGGTT+AGG | 0.471942 | 2:-19215204 | None:intergenic |
| TCAGCACAAGAAACTGTGTT+AGG | 0.474603 | 2:-19212268 | None:intergenic |
| TCTAGTTGTGCATTTGAAAA+GGG | 0.482989 | 2:-19211703 | None:intergenic |
| TGCTGAAATATCATCTGATC+TGG | 0.487672 | 2:+19212306 | MsG0280007687.01.T01:CDS |
| CAAATGTGTCTGGTGTGGTT+GGG | 0.490133 | 2:-19215219 | None:intergenic |
| ACTGTAGTCGCCAAAGAAGA+TGG | 0.491059 | 2:+19215487 | MsG0280007687.01.T01:CDS |
| CATGTACTGTTGTAAAATGA+AGG | 0.493251 | 2:-19211727 | None:intergenic |
| CTTATGGAGTTGTTATTTGG+TGG | 0.493339 | 2:-19212196 | None:intergenic |
| CAATCTGATCCCAGAATGCT+TGG | 0.494211 | 2:+19211796 | MsG0280007687.01.T01:CDS |
| GAATGGTAATTCTTCTGGAT+TGG | 0.496495 | 2:+19215462 | MsG0280007687.01.T01:CDS |
| AGATGATATTTCAGCAGAAA+GGG | 0.499823 | 2:-19212299 | None:intergenic |
| CAGATGATATTTCAGCAGAA+AGG | 0.505868 | 2:-19212300 | None:intergenic |
| CGCAACTTCGTGAAAGTCAG+GGG | 0.513320 | 2:+19213123 | MsG0280007687.01.T01:CDS |
| AAATAGGTCGTGTTAAGAGT+TGG | 0.514846 | 2:-19215136 | None:intergenic |
| GCTCATTCTAAATATAAGCT+TGG | 0.522249 | 2:+19215518 | MsG0280007687.01.T01:exon |
| TAGTTGGAGTCAAATGTGTC+TGG | 0.523617 | 2:-19215229 | None:intergenic |
| ATATTATTAGGGAGCTTCTA+CGG | 0.534251 | 2:-19215638 | None:intergenic |
| ATGGTGTTTGTGCTAATTGG+AGG | 0.541230 | 2:+19211676 | MsG0280007687.01.T01:CDS |
| GGTCGTGTTAAGAGTTGGAT+CGG | 0.546024 | 2:-19215131 | None:intergenic |
| TTGTTCTTCAAAGTTGATCA+GGG | 0.547147 | 2:+19215614 | MsG0280007687.01.T01:three_prime_UTR |
| GTCGTGTTAAGAGTTGGATC+GGG | 0.554434 | 2:-19215130 | None:intergenic |
| CTATGTCCTAATGGTGGACC+TGG | 0.568542 | 2:+19215175 | MsG0280007687.01.T01:CDS |
| TGGTGTGGTTGGGTCCAAAT+CGG | 0.571740 | 2:-19215209 | None:intergenic |
| TCGCAACTTCGTGAAAGTCA+GGG | 0.574145 | 2:+19213122 | MsG0280007687.01.T01:CDS |
| TATCAAACATTGTCTCAAAG+AGG | 0.574823 | 2:+19211598 | MsG0280007687.01.T01:five_prime_UTR |
| GGTGGTCATACAATCGGAAG+AGG | 0.591933 | 2:+19215055 | MsG0280007687.01.T01:intron |
| GCTGTTGCACTTAGACCAAG+TGG | 0.592170 | 2:-19211643 | None:intergenic |
| AAATCGGTTAGGTTTGTACC+AGG | 0.592503 | 2:-19215193 | None:intergenic |
| ATCTTCTTTGGCGACTACAG+TGG | 0.596406 | 2:-19215485 | None:intergenic |
| ACACAGTGTAATGCTGTGAA+TGG | 0.605918 | 2:+19215445 | MsG0280007687.01.T01:CDS |
| TTATACAATTTCAGCAACAC+AGG | 0.618081 | 2:+19215103 | MsG0280007687.01.T01:CDS |
| AGTCGCCAAAGAAGATGGAA+TGG | 0.632974 | 2:+19215492 | MsG0280007687.01.T01:CDS |
| AAACCAGATCAAAACAGCGG+TGG | 0.640248 | 2:+19212234 | MsG0280007687.01.T01:CDS |
| ACATATATGGTATGTGCATG+TGG | 0.641433 | 2:+19215574 | MsG0280007687.01.T01:three_prime_UTR |
| GGAGTCAAATGTGTCTGGTG+TGG | 0.642490 | 2:-19215224 | None:intergenic |
| CAAGCACTATGTCCTAATGG+TGG | 0.655776 | 2:+19215169 | MsG0280007687.01.T01:CDS |
| AATCTTGATTCAATCGTACG+TGG | 0.676766 | 2:+19211754 | MsG0280007687.01.T01:CDS |
| CGTATCGTTCAGCAAAATCG+AGG | 0.684189 | 2:-19212146 | None:intergenic |
| GCAACTTCGTGAAAGTCAGG+GGG | 0.709663 | 2:+19213124 | MsG0280007687.01.T01:CDS |
| GATAAACCAGATCAAAACAG+CGG | 0.762418 | 2:+19212231 | MsG0280007687.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTTTTATTTTTATTTT+TGG | + | Chr2:19213025-19213044 | MsG0280007687.01.T01:intron | 0.0% |
| !! | AACACAAAAAAAAAAAAAAT+TGG | - | Chr2:19213634-19213653 | None:intergenic | 10.0% |
| !! | CAAGTATAATAAATTATAAA+GGG | - | Chr2:19213422-19213441 | None:intergenic | 10.0% |
| !! | TAAACATCTTAAATATTAAT+TGG | + | Chr2:19213825-19213844 | MsG0280007687.01.T01:intron | 10.0% |
| !! | TCAAGTATAATAAATTATAA+AGG | - | Chr2:19213423-19213442 | None:intergenic | 10.0% |
| !!! | ATTAAACTTTTTTTATTAGT+TGG | - | Chr2:19213589-19213608 | None:intergenic | 10.0% |
| !!! | CTTTTTCAAATTTAAATTTA+AGG | + | Chr2:19211921-19211940 | MsG0280007687.01.T01:intron | 10.0% |
| !!! | GATTTTAGTTAAAATAATAA+GGG | - | Chr2:19213391-19213410 | None:intergenic | 10.0% |
| !!! | TTAAACTTTTTTTATTAGTT+GGG | - | Chr2:19213588-19213607 | None:intergenic | 10.0% |
| !!! | TTATTTTTAACTTTGTTTAT+AGG | + | Chr2:19213692-19213711 | MsG0280007687.01.T01:intron | 10.0% |
| !!! | TTTTTTTTTATGACTAAATT+CGG | + | Chr2:19214191-19214210 | MsG0280007687.01.T01:intron | 10.0% |
| !! | AAAAATAAAAAAATTACACG+TGG | - | Chr2:19213020-19213039 | None:intergenic | 15.0% |
| !! | AGATTGTTAAAAAATTTATC+CGG | + | Chr2:19214118-19214137 | MsG0280007687.01.T01:intron | 15.0% |
| !! | AGTAAAAAAAAATTAAACGT+GGG | - | Chr2:19214996-19215015 | None:intergenic | 15.0% |
| !! | ATATGATCATGTAAAATTAA+AGG | - | Chr2:19214072-19214091 | None:intergenic | 15.0% |
| !! | GAAAAAGAAAAATAAATAGT+AGG | - | Chr2:19211908-19211927 | None:intergenic | 15.0% |
| !! | TAAAATAATAAGGGTAAAAA+TGG | - | Chr2:19213382-19213401 | None:intergenic | 15.0% |
| !! | TAGTAAAAAAAAATTAAACG+TGG | - | Chr2:19214997-19215016 | None:intergenic | 15.0% |
| !! | TATATTTATTTGTTTATCCT+TGG | - | Chr2:19212541-19212560 | None:intergenic | 15.0% |
| !! | TTCAAATTTAAATTTAAGGA+CGG | + | Chr2:19211925-19211944 | MsG0280007687.01.T01:intron | 15.0% |
| !!! | AAAAAAAGTTTAATTTTCCT+GGG | + | Chr2:19213595-19213614 | MsG0280007687.01.T01:intron | 15.0% |
| !!! | ATTTAAACTAGTCAAATTTT+AGG | - | Chr2:19214614-19214633 | None:intergenic | 15.0% |
| !!! | GGATTTTAGTTAAAATAATA+AGG | - | Chr2:19213392-19213411 | None:intergenic | 15.0% |
| !!! | TAAAAAAAGTTTAATTTTCC+TGG | + | Chr2:19213594-19213613 | MsG0280007687.01.T01:intron | 15.0% |
| !!! | TGTAGTTTTTTTTTTCTTAA+GGG | - | Chr2:19212904-19212923 | None:intergenic | 15.0% |
| !!! | TTGTAGTTTTTTTTTTCTTA+AGG | - | Chr2:19212905-19212924 | None:intergenic | 15.0% |
| !! | ACTTTGACACAAATATTATT+AGG | - | Chr2:19215653-19215672 | None:intergenic | 20.0% |
| !! | ATGATAAAAATGGGAAATAT+TGG | + | Chr2:19215391-19215410 | MsG0280007687.01.T01:CDS | 20.0% |
| !! | CTTTGACACAAATATTATTA+GGG | - | Chr2:19215652-19215671 | None:intergenic | 20.0% |
| !! | GTAAAAAAAAATTAAACGTG+GGG | - | Chr2:19214995-19215014 | None:intergenic | 20.0% |
| !! | GTTCATTTAAATATATGACT+AGG | - | Chr2:19212349-19212368 | None:intergenic | 20.0% |
| !! | TAAAAAAAAATTAAACGTGG+GGG | - | Chr2:19214994-19215013 | None:intergenic | 20.0% |
| !! | TAAATTATAAAGGGTAGATA+TGG | - | Chr2:19213413-19213432 | None:intergenic | 20.0% |
| !! | TAGTTGTAAATTGACATAAA+AGG | - | Chr2:19213901-19213920 | None:intergenic | 20.0% |
| !! | TCATATCTCAATTATATAAC+TGG | + | Chr2:19212692-19212711 | MsG0280007687.01.T01:intron | 20.0% |
| !!! | AAAGTGTTTGATAAAATTAG+CGG | - | Chr2:19213937-19213956 | None:intergenic | 20.0% |
| !!! | ACATGTTTCAATCATTTTTT+AGG | + | Chr2:19215034-19215053 | MsG0280007687.01.T01:intron | 20.0% |
| !!! | CTTTTTTAAAGTTGTGATTT+TGG | + | Chr2:19212877-19212896 | MsG0280007687.01.T01:intron | 20.0% |
| !!! | GTAGTTTTTTTTTTCTTAAG+GGG | - | Chr2:19212903-19212922 | None:intergenic | 20.0% |
| !!! | TAATTTTGTGCATACATATA+TGG | + | Chr2:19215561-19215580 | MsG0280007687.01.T01:three_prime_UTR | 20.0% |
| !!! | TGATATGATGGTTTTAATTT+TGG | + | Chr2:19212829-19212848 | MsG0280007687.01.T01:intron | 20.0% |
| !!! | TTATTTTTATTTTTGGCCTT+GGG | + | Chr2:19213032-19213051 | MsG0280007687.01.T01:intron | 20.0% |
| !!! | TTTATTTTTATTTTTGGCCT+TGG | + | Chr2:19213031-19213050 | MsG0280007687.01.T01:intron | 20.0% |
| !!! | TTTGTAGTTTTTTTTCTTAG+AGG | + | Chr2:19213093-19213112 | MsG0280007687.01.T01:intron | 20.0% |
| !!! | TTTTTAACAATCTCAAAAGT+GGG | - | Chr2:19214111-19214130 | None:intergenic | 20.0% |
| !!! | TTTTTTAACAATCTCAAAAG+TGG | - | Chr2:19214112-19214131 | None:intergenic | 20.0% |
| ! | AAACAAAAAATGAATCCACT+TGG | + | Chr2:19211628-19211647 | MsG0280007687.01.T01:exon | 25.0% |
| ! | AAAGAAGAGAGTTTGATTAT+TGG | - | Chr2:19215353-19215372 | None:intergenic | 25.0% |
| ! | AAATATATGACTAGGAAACT+AGG | - | Chr2:19212341-19212360 | None:intergenic | 25.0% |
| ! | AAATCACATACATAGTAATG+AGG | - | Chr2:19212034-19212053 | None:intergenic | 25.0% |
| ! | ATCTCAATTATATAACTGGT+GGG | + | Chr2:19212696-19212715 | MsG0280007687.01.T01:intron | 25.0% |
| ! | CATCATAAAACAACATGAAA+AGG | - | Chr2:19214326-19214345 | None:intergenic | 25.0% |
| ! | GTTCAAACAAATCATTATCA+AGG | + | Chr2:19214635-19214654 | MsG0280007687.01.T01:intron | 25.0% |
| ! | GTTGCTTCAATGATAAAAAT+GGG | + | Chr2:19215382-19215401 | MsG0280007687.01.T01:CDS | 25.0% |
| ! | TATCTCAATTATATAACTGG+TGG | + | Chr2:19212695-19212714 | MsG0280007687.01.T01:intron | 25.0% |
| ! | TCATGTAAAATTAAAGGCTT+AGG | - | Chr2:19214066-19214085 | None:intergenic | 25.0% |
| !! | ACAACTTTAAAAAAGTTGAG+GGG | - | Chr2:19212872-19212891 | None:intergenic | 25.0% |
| !! | CACAACTTTAAAAAAGTTGA+GGG | - | Chr2:19212873-19212892 | None:intergenic | 25.0% |
| !! | CATTCATGTTACATATTTTG+AGG | - | Chr2:19214934-19214953 | None:intergenic | 25.0% |
| !! | TCACAACTTTAAAAAAGTTG+AGG | - | Chr2:19212874-19212893 | None:intergenic | 25.0% |
| !! | TGTTGCTTCAATGATAAAAA+TGG | + | Chr2:19215381-19215400 | MsG0280007687.01.T01:CDS | 25.0% |
| !!! | GCTTTTATTTTCTATGAACA+AGG | - | Chr2:19212409-19212428 | None:intergenic | 25.0% |
| !!! | TATTTTTATTTTTGGCCTTG+GGG | + | Chr2:19213033-19213052 | MsG0280007687.01.T01:intron | 25.0% |
| !!! | TGGTTATGTATATTTTGGTT+TGG | + | Chr2:19212804-19212823 | MsG0280007687.01.T01:intron | 25.0% |
| !!! | TGTTTCAATCATTTTTTAGG+TGG | + | Chr2:19215037-19215056 | MsG0280007687.01.T01:intron | 25.0% |
| AAAAATAGCTTATAAGCTCG+TGG | - | Chr2:19213302-19213321 | None:intergenic | 30.0% | |
| AAACAGTCATGAAAATGTCA+AGG | - | Chr2:19211885-19211904 | None:intergenic | 30.0% | |
| AAGCAAACAAACGTAGATAT+TGG | + | Chr2:19212425-19212444 | MsG0280007687.01.T01:intron | 30.0% | |
| AATTAATGTATGCCCCAATT+CGG | + | Chr2:19212649-19212668 | MsG0280007687.01.T01:intron | 30.0% | |
| AGATGATATTTCAGCAGAAA+GGG | - | Chr2:19212302-19212321 | None:intergenic | 30.0% | |
| ATAAACTCACACATACAAAG+TGG | - | Chr2:19214489-19214508 | None:intergenic | 30.0% | |
| ATATTATTAGGGAGCTTCTA+CGG | - | Chr2:19215641-19215660 | None:intergenic | 30.0% | |
| ATCTAGTTGTGCATTTGAAA+AGG | - | Chr2:19211707-19211726 | None:intergenic | 30.0% | |
| ATGCTACTAATTAACTGTTG+CGG | - | Chr2:19214172-19214191 | None:intergenic | 30.0% | |
| CATGTACTGTTGTAAAATGA+AGG | - | Chr2:19211730-19211749 | None:intergenic | 30.0% | |
| CATTTGTGGAAAAAAGTTCT+TGG | - | Chr2:19215297-19215316 | None:intergenic | 30.0% | |
| CTATAAGCTATAAGCTCATT+TGG | - | Chr2:19213186-19213205 | None:intergenic | 30.0% | |
| GCTCATTCTAAATATAAGCT+TGG | + | Chr2:19215518-19215537 | MsG0280007687.01.T01:exon | 30.0% | |
| TACAATGCAACAAAAATTGC+AGG | + | Chr2:19214729-19214748 | MsG0280007687.01.T01:intron | 30.0% | |
| TATCAAACATTGTCTCAAAG+AGG | + | Chr2:19211598-19211617 | MsG0280007687.01.T01:five_prime_UTR | 30.0% | |
| TCTAGTTGTGCATTTGAAAA+GGG | - | Chr2:19211706-19211725 | None:intergenic | 30.0% | |
| TGCTTGCAATGTTTGTAAAT+AGG | - | Chr2:19215155-19215174 | None:intergenic | 30.0% | |
| TGTCATTACATGAAACGAAA+TGG | - | Chr2:19213546-19213565 | None:intergenic | 30.0% | |
| TTATACAATTTCAGCAACAC+AGG | + | Chr2:19215103-19215122 | MsG0280007687.01.T01:CDS | 30.0% | |
| TTGACAAAATAAGCTCTGTT+TGG | + | Chr2:19213233-19213252 | MsG0280007687.01.T01:intron | 30.0% | |
| TTGTATGTGTGAGTTTATGA+TGG | + | Chr2:19214491-19214510 | MsG0280007687.01.T01:intron | 30.0% | |
| ! | ATAGTTGTGAACTTTGTTGT+AGG | + | Chr2:19212114-19212133 | MsG0280007687.01.T01:intron | 30.0% |
| ! | GTAGACTTTTATATTGTGTC+TGG | + | Chr2:19212784-19212803 | MsG0280007687.01.T01:intron | 30.0% |
| ! | GTGTCTGGTTATGTATATTT+TGG | + | Chr2:19212799-19212818 | MsG0280007687.01.T01:intron | 30.0% |
| ! | TAGTTGTGAACTTTGTTGTA+GGG | + | Chr2:19212115-19212134 | MsG0280007687.01.T01:intron | 30.0% |
| ! | TGCAATTTTTGTTGCATTGT+AGG | - | Chr2:19214730-19214749 | None:intergenic | 30.0% |
| ! | TTCTATGAACAAGGAAGTTT+TGG | - | Chr2:19212400-19212419 | None:intergenic | 30.0% |
| ! | TTGTTCTTCAAAGTTGATCA+GGG | + | Chr2:19215614-19215633 | MsG0280007687.01.T01:three_prime_UTR | 30.0% |
| !! | AGTTAGATTTTAGTCGAGTA+AGG | - | Chr2:19214851-19214870 | None:intergenic | 30.0% |
| !! | GGAAATATTGGAGTTTTAAC+TGG | + | Chr2:19215403-19215422 | MsG0280007687.01.T01:CDS | 30.0% |
| !! | GTGATGCTTTTATCTAGTTT+GGG | - | Chr2:19211564-19211583 | None:intergenic | 30.0% |
| !!! | ATTTTTATTTTTGGCCTTGG+GGG | + | Chr2:19213034-19213053 | MsG0280007687.01.T01:intron | 30.0% |
| !!! | CAAGAACTTTTTTCCACAAA+TGG | + | Chr2:19215295-19215314 | MsG0280007687.01.T01:CDS | 30.0% |
| !!! | GGGGTAAAGATGTAATTTTT+TGG | + | Chr2:19214232-19214251 | MsG0280007687.01.T01:intron | 30.0% |
| !!! | TTTTTAGGTGGTCATACAAT+CGG | + | Chr2:19215049-19215068 | MsG0280007687.01.T01:intron | 30.0% |
| AAATAGGTCGTGTTAAGAGT+TGG | - | Chr2:19215139-19215158 | None:intergenic | 35.0% | |
| AAATGCCGAAATTGTTAGGT+TGG | + | Chr2:19214431-19214450 | MsG0280007687.01.T01:intron | 35.0% | |
| AACGTCCAACCTAACAATTT+CGG | - | Chr2:19214439-19214458 | None:intergenic | 35.0% | |
| AAGCTATAAGCTCATTTGGT+GGG | - | Chr2:19213182-19213201 | None:intergenic | 35.0% | |
| AATAGTGTCAGAACCATTTG+TGG | - | Chr2:19215311-19215330 | None:intergenic | 35.0% | |
| AATCTTGATTCAATCGTACG+TGG | + | Chr2:19211754-19211773 | MsG0280007687.01.T01:CDS | 35.0% | |
| ACATATATGGTATGTGCATG+TGG | + | Chr2:19215574-19215593 | MsG0280007687.01.T01:three_prime_UTR | 35.0% | |
| ATAAAAGTCTACACTACTGC+TGG | - | Chr2:19212776-19212795 | None:intergenic | 35.0% | |
| ATTAATGTATGCCCCAATTC+GGG | + | Chr2:19212650-19212669 | MsG0280007687.01.T01:intron | 35.0% | |
| CAACAAAAATTGCAGGCAAA+TGG | + | Chr2:19214736-19214755 | MsG0280007687.01.T01:intron | 35.0% | |
| CAGATGATATTTCAGCAGAA+AGG | - | Chr2:19212303-19212322 | None:intergenic | 35.0% | |
| CCAAATAACAACTCCATAAG+AGG | + | Chr2:19212199-19212218 | MsG0280007687.01.T01:CDS | 35.0% | |
| GAAAATGTCAAGGTAAGAGA+TGG | - | Chr2:19211875-19211894 | None:intergenic | 35.0% | |
| GAAACAAGCCATTTCCAATT+TGG | - | Chr2:19215267-19215286 | None:intergenic | 35.0% | |
| GAATGGTAATTCTTCTGGAT+TGG | + | Chr2:19215462-19215481 | MsG0280007687.01.T01:CDS | 35.0% | |
| GATAAACCAGATCAAAACAG+CGG | + | Chr2:19212231-19212250 | MsG0280007687.01.T01:CDS | 35.0% | |
| GCAAAAATGCCGAAATTGTT+AGG | + | Chr2:19214427-19214446 | MsG0280007687.01.T01:intron | 35.0% | |
| GCAAGTTCAATTAGGAAGAA+GGG | + | Chr2:19214768-19214787 | MsG0280007687.01.T01:intron | 35.0% | |
| GCTCTGTTTGGTAAAAATAG+CGG | - | Chr2:19214044-19214063 | None:intergenic | 35.0% | |
| TAACAACTCCATAAGAGGTT+TGG | + | Chr2:19212204-19212223 | MsG0280007687.01.T01:CDS | 35.0% | |
| TAAGCTATAAGCTCATTTGG+TGG | - | Chr2:19213183-19213202 | None:intergenic | 35.0% | |
| TACTACTCCAATCTCCAAAT+TGG | + | Chr2:19215250-19215269 | MsG0280007687.01.T01:CDS | 35.0% | |
| TATCACATCCAAACCTCTTA+TGG | - | Chr2:19212215-19212234 | None:intergenic | 35.0% | |
| TCAGAAGTTGTCCAAAACAT+AGG | - | Chr2:19212513-19212532 | None:intergenic | 35.0% | |
| TCCAATCTCCAAATTGGAAA+TGG | + | Chr2:19215256-19215275 | MsG0280007687.01.T01:CDS | 35.0% | |
| TGCTGAAATATCATCTGATC+TGG | + | Chr2:19212306-19212325 | MsG0280007687.01.T01:CDS | 35.0% | |
| TGTATGGTGTTTGTGCTAAT+TGG | + | Chr2:19211673-19211692 | MsG0280007687.01.T01:CDS | 35.0% | |
| TTCAAAGCGAATGATGAAGT+AGG | + | Chr2:19214258-19214277 | MsG0280007687.01.T01:intron | 35.0% | |
| ! | AACAATTTCGGCATTTTTGC+CGG | - | Chr2:19214427-19214446 | None:intergenic | 35.0% |
| ! | AGTTGTCACAACCTATGTTT+TGG | + | Chr2:19212499-19212518 | MsG0280007687.01.T01:intron | 35.0% |
| ! | CCTCTTATGGAGTTGTTATT+TGG | - | Chr2:19212202-19212221 | None:intergenic | 35.0% |
| ! | CGTGATGCTTTTATCTAGTT+TGG | - | Chr2:19211565-19211584 | None:intergenic | 35.0% |
| ! | CTTGTTCTTCAAAGTTGATC+AGG | + | Chr2:19215613-19215632 | MsG0280007687.01.T01:three_prime_UTR | 35.0% |
| ! | TCTTTGTATTTAAAGCCTCG+AGG | - | Chr2:19212001-19212020 | None:intergenic | 35.0% |
| !! | CTTATGGAGTTGTTATTTGG+TGG | - | Chr2:19212199-19212218 | None:intergenic | 35.0% |
| !! | TTTGGTTTGGACTGATATGA+TGG | + | Chr2:19212817-19212836 | MsG0280007687.01.T01:intron | 35.0% |
| !!! | TTTTTATTTTTGGCCTTGGG+GGG | + | Chr2:19213035-19213054 | MsG0280007687.01.T01:intron | 35.0% |
| AAATCGGTTAGGTTTGTACC+AGG | - | Chr2:19215196-19215215 | None:intergenic | 40.0% | |
| AACTCACACATACAAAGTGG+AGG | - | Chr2:19214486-19214505 | None:intergenic | 40.0% | |
| ACACAGTGTAATGCTGTGAA+TGG | + | Chr2:19215445-19215464 | MsG0280007687.01.T01:CDS | 40.0% | |
| ACTGCTACAGTTGCAAACTT+AGG | + | Chr2:19213063-19213082 | MsG0280007687.01.T01:intron | 40.0% | |
| ACTGCTATTAAGGCTCTGTT+TGG | + | Chr2:19213152-19213171 | MsG0280007687.01.T01:CDS | 40.0% | |
| AGCGTAGACCAAGTCAAAAT+TGG | - | Chr2:19212974-19212993 | None:intergenic | 40.0% | |
| AGTCGAGTAAGGTTGAAAGT+GGG | - | Chr2:19214840-19214859 | None:intergenic | 40.0% | |
| ATGAGACTACCAAGCATTCT+GGG | - | Chr2:19211808-19211827 | None:intergenic | 40.0% | |
| ATGGTGTTTGTGCTAATTGG+AGG | + | Chr2:19211676-19211695 | MsG0280007687.01.T01:CDS | 40.0% | |
| CAACTAGATCAGTAGTACTG+AGG | - | Chr2:19214886-19214905 | None:intergenic | 40.0% | |
| CCTAATTGAACTTGCCAAGT+AGG | - | Chr2:19214763-19214782 | None:intergenic | 40.0% | |
| CCTACTTGGCAAGTTCAATT+AGG | + | Chr2:19214760-19214779 | MsG0280007687.01.T01:intron | 40.0% | |
| CTATAAGCTCAAACGCTACT+TGG | - | Chr2:19213336-19213355 | None:intergenic | 40.0% | |
| CTCATAAGTCCTAACTCAAC+CGG | + | Chr2:19214405-19214424 | MsG0280007687.01.T01:intron | 40.0% | |
| CTGCTACAGTTGCAAACTTA+GGG | + | Chr2:19213064-19213083 | MsG0280007687.01.T01:intron | 40.0% | |
| GACAACTTCTGATACAACCA+AGG | + | Chr2:19212521-19212540 | MsG0280007687.01.T01:intron | 40.0% | |
| GCCATTTCCAATTTGGAGAT+TGG | - | Chr2:19215260-19215279 | None:intergenic | 40.0% | |
| GCTGTGAATGGTAATTCTTC+TGG | + | Chr2:19215457-19215476 | MsG0280007687.01.T01:CDS | 40.0% | |
| GGCAAGTTCAATTAGGAAGA+AGG | + | Chr2:19214767-19214786 | MsG0280007687.01.T01:intron | 40.0% | |
| TAGGACTTATGAGACACGAT+TGG | - | Chr2:19214398-19214417 | None:intergenic | 40.0% | |
| TAGTCGAGTAAGGTTGAAAG+TGG | - | Chr2:19214841-19214860 | None:intergenic | 40.0% | |
| TAGTTGGAGTCAAATGTGTC+TGG | - | Chr2:19215232-19215251 | None:intergenic | 40.0% | |
| TCAGCACAAGAAACTGTGTT+AGG | - | Chr2:19212271-19212290 | None:intergenic | 40.0% | |
| TGCTACAGTTGCAAACTTAG+GGG | + | Chr2:19213065-19213084 | MsG0280007687.01.T01:intron | 40.0% | |
| TGGTACAAACCTAACCGATT+TGG | + | Chr2:19215195-19215214 | MsG0280007687.01.T01:CDS | 40.0% | |
| TTAAAGGCTTAGGCTCTGTT+TGG | - | Chr2:19214056-19214075 | None:intergenic | 40.0% | |
| TTGCAAGCACTATGTCCTAA+TGG | + | Chr2:19215166-19215185 | MsG0280007687.01.T01:CDS | 40.0% | |
| TTGGAGATTGGAGTAGTAGT+TGG | - | Chr2:19215248-19215267 | None:intergenic | 40.0% | |
| TTTCGACAGTTAACTACAGC+CGG | - | Chr2:19214140-19214159 | None:intergenic | 40.0% | |
| ! | CTCGATTTTGCTGAACGATA+CGG | + | Chr2:19212147-19212166 | MsG0280007687.01.T01:CDS | 40.0% |
| ! | CTTTCACGAAGTTGCGATTT+TGG | - | Chr2:19213119-19213138 | None:intergenic | 40.0% |
| ! | GTTTGCAACTGTAGCAGTTT+TGG | - | Chr2:19213061-19213080 | None:intergenic | 40.0% |
| ! | TTGGTAGTCAGTATATACCC+AGG | - | Chr2:19213615-19213634 | None:intergenic | 40.0% |
| !! | ACCAAGTCAAAATTGGCCTT+GGG | - | Chr2:19212967-19212986 | None:intergenic | 40.0% |
| !! | GTTAGGTTGGACGTTATGAT+CGG | + | Chr2:19214444-19214463 | MsG0280007687.01.T01:intron | 40.0% |
| !! | TGCAACAGCTTTTTGCTGTA+TGG | + | Chr2:19211657-19211676 | MsG0280007687.01.T01:CDS | 40.0% |
| !! | TTAGGTTGGACGTTATGATC+GGG | + | Chr2:19214445-19214464 | MsG0280007687.01.T01:intron | 40.0% |
| !!! | GGAGTTTTAACTGGATCTCA+AGG | + | Chr2:19215412-19215431 | MsG0280007687.01.T01:CDS | 40.0% |
| !!! | TTTTTGGTTGACAGACGAGA+TGG | - | Chr2:19214522-19214541 | None:intergenic | 40.0% |
| AAACCAGATCAAAACAGCGG+TGG | + | Chr2:19212234-19212253 | MsG0280007687.01.T01:CDS | 45.0% | |
| AAGCTTGTATGCCCCAATTC+GGG | + | Chr2:19212726-19212745 | MsG0280007687.01.T01:intron | 45.0% | |
| ACTGATCTAGTTGCACTCTC+AGG | + | Chr2:19214893-19214912 | MsG0280007687.01.T01:intron | 45.0% | |
| ACTGTAGTCGCCAAAGAAGA+TGG | + | Chr2:19215487-19215506 | MsG0280007687.01.T01:CDS | 45.0% | |
| AGTCGCCAAAGAAGATGGAA+TGG | + | Chr2:19215492-19215511 | MsG0280007687.01.T01:CDS | 45.0% | |
| ATAGCCTTCCTTACCCGAAT+TGG | - | Chr2:19212666-19212685 | None:intergenic | 45.0% | |
| ATCGCAACTTCGTGAAAGTC+AGG | + | Chr2:19213121-19213140 | MsG0280007687.01.T01:CDS | 45.0% | |
| ATCTTCTTTGGCGACTACAG+TGG | - | Chr2:19215488-19215507 | None:intergenic | 45.0% | |
| CAAATGTGTCTGGTGTGGTT+GGG | - | Chr2:19215222-19215241 | None:intergenic | 45.0% | |
| CAAGCACTATGTCCTAATGG+TGG | + | Chr2:19215169-19215188 | MsG0280007687.01.T01:CDS | 45.0% | |
| CAAGCTTGTATGCCCCAATT+CGG | + | Chr2:19212725-19212744 | MsG0280007687.01.T01:intron | 45.0% | |
| CAAGGAAGGCTATCAAAGTG+TGG | + | Chr2:19212749-19212768 | MsG0280007687.01.T01:intron | 45.0% | |
| CAATCTGATCCCAGAATGCT+TGG | + | Chr2:19211796-19211815 | MsG0280007687.01.T01:CDS | 45.0% | |
| CGTATCGTTCAGCAAAATCG+AGG | - | Chr2:19212149-19212168 | None:intergenic | 45.0% | |
| GATGAGACTACCAAGCATTC+TGG | - | Chr2:19211809-19211828 | None:intergenic | 45.0% | |
| GCGACAGTTAATTGTCGATG+GGG | + | Chr2:19214213-19214232 | MsG0280007687.01.T01:intron | 45.0% | |
| GCTACAGTTGCAAACTTAGG+GGG | + | Chr2:19213066-19213085 | MsG0280007687.01.T01:intron | 45.0% | |
| GCTAGCCATTCCATCTTCTT+TGG | - | Chr2:19215500-19215519 | None:intergenic | 45.0% | |
| GGCGACAGTTAATTGTCGAT+GGG | + | Chr2:19214212-19214231 | MsG0280007687.01.T01:intron | 45.0% | |
| GGTCGTGTTAAGAGTTGGAT+CGG | - | Chr2:19215134-19215153 | None:intergenic | 45.0% | |
| GTCGAGTAAGGTTGAAAGTG+GGG | - | Chr2:19214839-19214858 | None:intergenic | 45.0% | |
| GTCGTGTTAAGAGTTGGATC+GGG | - | Chr2:19215133-19215152 | None:intergenic | 45.0% | |
| TAGCCTTCCTTACCCGAATT+GGG | - | Chr2:19212665-19212684 | None:intergenic | 45.0% | |
| TCAAATGTGTCTGGTGTGGT+TGG | - | Chr2:19215223-19215242 | None:intergenic | 45.0% | |
| TCGAGTAAGGTTGAAAGTGG+GGG | - | Chr2:19214838-19214857 | None:intergenic | 45.0% | |
| TCGCAACTTCGTGAAAGTCA+GGG | + | Chr2:19213122-19213141 | MsG0280007687.01.T01:CDS | 45.0% | |
| TGCCACAGGTGCAAAACTTA+GGG | - | Chr2:19212935-19212954 | None:intergenic | 45.0% | |
| TTTAAGCGAGTTAGACCTCG+AGG | + | Chr2:19211983-19212002 | MsG0280007687.01.T01:intron | 45.0% | |
| TTTGTACCAGGTCCACCATT+AGG | - | Chr2:19215184-19215203 | None:intergenic | 45.0% | |
| ! | CACATACAAAGTGGAGGCAT+CGG | - | Chr2:19214480-19214499 | None:intergenic | 45.0% |
| ! | GAATGCTTGGTAGTCTCATC+AGG | + | Chr2:19211809-19211828 | MsG0280007687.01.T01:CDS | 45.0% |
| ! | GACCAAGTCAAAATTGGCCT+TGG | - | Chr2:19212968-19212987 | None:intergenic | 45.0% |
| ! | TAGGTTGGACGTTATGATCG+GGG | + | Chr2:19214446-19214465 | MsG0280007687.01.T01:intron | 45.0% |
| ! | TTTTGCACCTGTGGCAGTTT+TGG | + | Chr2:19212939-19212958 | MsG0280007687.01.T01:intron | 45.0% |
| !! | ACATACAAAGTGGAGGCATC+GGG | - | Chr2:19214479-19214498 | None:intergenic | 45.0% |
| !! | CAAGTCAAAATTGGCCTTGG+GGG | - | Chr2:19212965-19212984 | None:intergenic | 45.0% |
| !! | CCAAGTCAAAATTGGCCTTG+GGG | - | Chr2:19212966-19212985 | None:intergenic | 45.0% |
| !! | GCATTTTTGCCGGTTGAGTT+AGG | - | Chr2:19214417-19214436 | None:intergenic | 45.0% |
| !!! | TTTCCACCGCTGTTTTGATC+TGG | - | Chr2:19212240-19212259 | None:intergenic | 45.0% |
| !! | GATAAATAAAATATATATTA+TGG | - | Chr2:19214708-19214727 | None:intergenic | 5.0% |
| !!! | AGTATTTTTTATTTATTTTT+TGG | - | Chr2:19214538-19214557 | None:intergenic | 5.0% |
| AGCCTTCCTTACCCGAATTG+GGG | - | Chr2:19212664-19212683 | None:intergenic | 50.0% | |
| ATAGCCTTCCTTGCCCGAAT+TGG | - | Chr2:19212742-19212761 | None:intergenic | 50.0% | |
| CAGGAAGGTTTGAGCTGCAA+GGG | - | Chr2:19214815-19214834 | None:intergenic | 50.0% | |
| CCACAGGTGCAAAACTTAGG+GGG | - | Chr2:19212933-19212952 | None:intergenic | 50.0% | |
| CGCAACTTCGTGAAAGTCAG+GGG | + | Chr2:19213123-19213142 | MsG0280007687.01.T01:CDS | 50.0% | |
| CGGCGACAGTTAATTGTCGA+TGG | + | Chr2:19214211-19214230 | MsG0280007687.01.T01:intron | 50.0% | |
| CTGCCACAGGTGCAAAACTT+AGG | - | Chr2:19212936-19212955 | None:intergenic | 50.0% | |
| GCAACTTCGTGAAAGTCAGG+GGG | + | Chr2:19213124-19213143 | MsG0280007687.01.T01:CDS | 50.0% | |
| GCCACAGGTGCAAAACTTAG+GGG | - | Chr2:19212934-19212953 | None:intergenic | 50.0% | |
| GCTGTTGCACTTAGACCAAG+TGG | - | Chr2:19211646-19211665 | None:intergenic | 50.0% | |
| GGAGTCAAATGTGTCTGGTG+TGG | - | Chr2:19215227-19215246 | None:intergenic | 50.0% | |
| GGGGGCGAAAACTGCTATTA+AGG | + | Chr2:19213142-19213161 | MsG0280007687.01.T01:CDS | 50.0% | |
| GGTGGTCATACAATCGGAAG+AGG | + | Chr2:19215055-19215074 | MsG0280007687.01.T01:intron | 50.0% | |
| TACACGTGGCACCTCACTTA+GGG | - | Chr2:19213006-19213025 | None:intergenic | 50.0% | |
| TAGCCTTCCTTGCCCGAATT+GGG | - | Chr2:19212741-19212760 | None:intergenic | 50.0% | |
| TGCAGGCAAATGGTCCTACT+TGG | + | Chr2:19214746-19214765 | MsG0280007687.01.T01:intron | 50.0% | |
| TGGTGTGGTTGGGTCCAAAT+CGG | - | Chr2:19215212-19215231 | None:intergenic | 50.0% | |
| TGGTTGGGTCCAAATCGGTT+AGG | - | Chr2:19215207-19215226 | None:intergenic | 50.0% | |
| TGTATGCCCCAATTCGGGTA+AGG | + | Chr2:19212655-19212674 | MsG0280007687.01.T01:intron | 50.0% | |
| TTACACGTGGCACCTCACTT+AGG | - | Chr2:19213007-19213026 | None:intergenic | 50.0% | |
| !! | CATACAAAGTGGAGGCATCG+GGG | - | Chr2:19214478-19214497 | None:intergenic | 50.0% |
| !! | CTATGTCCTAATGGTGGACC+TGG | + | Chr2:19215175-19215194 | MsG0280007687.01.T01:CDS | 50.0% |
| !!! | CCCCAAGGCCAATTTTGACT+TGG | + | Chr2:19212963-19212982 | MsG0280007687.01.T01:intron | 50.0% |
| AGCCTTCCTTGCCCGAATTG+GGG | - | Chr2:19212740-19212759 | None:intergenic | 55.0% | |
| GCAGGAAGGTTTGAGCTGCA+AGG | - | Chr2:19214816-19214835 | None:intergenic | 55.0% | |
| GTAAGGTTGAAAGTGGGGGC+AGG | - | Chr2:19214834-19214853 | None:intergenic | 55.0% | |
| TGCCCCAATTCGGGTAAGGA+AGG | + | Chr2:19212659-19212678 | MsG0280007687.01.T01:intron | 55.0% | |
| TGTATGCCCCAATTCGGGCA+AGG | + | Chr2:19212731-19212750 | MsG0280007687.01.T01:intron | 55.0% | |
| ! | CCCCCTAAGTTTTGCACCTG+TGG | + | Chr2:19212930-19212949 | MsG0280007687.01.T01:intron | 55.0% |
| !! | TGACTTGGTCTACGCTGACG+TGG | + | Chr2:19212978-19212997 | MsG0280007687.01.T01:intron | 55.0% |
| CTGACGTGGCACCCTAAGTG+AGG | + | Chr2:19212992-19213011 | MsG0280007687.01.T01:intron | 60.0% | |
| GGTTGAAAGTGGGGGCAGGA+AGG | - | Chr2:19214830-19214849 | None:intergenic | 60.0% | |
| TGCCCCAATTCGGGCAAGGA+AGG | + | Chr2:19212735-19212754 | MsG0280007687.01.T01:intron | 60.0% | |
| TTGGGGGCCAAAACTGCCAC+AGG | - | Chr2:19212949-19212968 | None:intergenic | 60.0% | |
| !! | GTAGCAGTTTTGGCCCCCCA+AGG | - | Chr2:19213051-19213070 | None:intergenic | 60.0% |
| !! | TGTGGCAGTTTTGGCCCCCA+AGG | + | Chr2:19212948-19212967 | MsG0280007687.01.T01:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr2 | gene | 19211559 | 19215755 | 19211559 | ID=MsG0280007687.01;Name=MsG0280007687.01 |
| Chr2 | mRNA | 19211559 | 19215755 | 19211559 | ID=MsG0280007687.01.T01;Parent=MsG0280007687.01;Name=MsG0280007687.01.T01;_AED=0.48;_eAED=0.51;_QI=78|0.33|0.75|1|0.66|0.75|4|227|315 |
| Chr2 | exon | 19211559 | 19211858 | 19211559 | ID=MsG0280007687.01.T01:exon:10138;Parent=MsG0280007687.01.T01 |
| Chr2 | exon | 19212136 | 19212327 | 19212136 | ID=MsG0280007687.01.T01:exon:10139;Parent=MsG0280007687.01.T01 |
| Chr2 | exon | 19213113 | 19213173 | 19213113 | ID=MsG0280007687.01.T01:exon:10140;Parent=MsG0280007687.01.T01 |
| Chr2 | exon | 19215056 | 19215755 | 19215056 | ID=MsG0280007687.01.T01:exon:10141;Parent=MsG0280007687.01.T01 |
| Chr2 | five_prime_UTR | 19211559 | 19211636 | 19211559 | ID=MsG0280007687.01.T01:five_prime_utr;Parent=MsG0280007687.01.T01 |
| Chr2 | CDS | 19211637 | 19211858 | 19211637 | ID=MsG0280007687.01.T01:cds;Parent=MsG0280007687.01.T01 |
| Chr2 | CDS | 19212136 | 19212327 | 19212136 | ID=MsG0280007687.01.T01:cds;Parent=MsG0280007687.01.T01 |
| Chr2 | CDS | 19213113 | 19213173 | 19213113 | ID=MsG0280007687.01.T01:cds;Parent=MsG0280007687.01.T01 |
| Chr2 | CDS | 19215056 | 19215528 | 19215056 | ID=MsG0280007687.01.T01:cds;Parent=MsG0280007687.01.T01 |
| Chr2 | three_prime_UTR | 19215529 | 19215755 | 19215529 | ID=MsG0280007687.01.T01:three_prime_utr;Parent=MsG0280007687.01.T01 |
| Gene Sequence |
| Protein sequence |
