AlfalfaGEDB | MsG0380016380.01

M. sativa cultivar ZhongmuNo.1 / MsG0380016380.01

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380016380.01.T01	XP_003602049.1	92.941	170	9	2	1	168	1	169	2.90E-91	273

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380016380.01.T01	G7LH76	92.941	170	9	2	1	168	1	169	1.39e-91	273

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080047967.01	MsG0380016380.01	0.832649	8.377945e-56	9.423536e-53
MsG0080048694.01	MsG0380016380.01	0.817534	3.137908e-52	2.291176e-49
MsG0080048695.01	MsG0380016380.01	0.818040	2.411949e-52	1.785656e-49
MsG0080048738.01	MsG0380016380.01	-0.802950	4.399238e-49	2.183185e-46
MsG0080048887.01	MsG0380016380.01	0.802968	4.361899e-49	2.165630e-46
MsG0080048889.01	MsG0380016380.01	-0.828001	1.145899e-54	1.124602e-51
MsG0080048896.01	MsG0380016380.01	0.807899	4.035007e-50	2.274449e-47
MsG0080048918.01	MsG0380016380.01	0.837671	4.530057e-57	5.927593e-54
MsG0080048919.01	MsG0380016380.01	0.855889	4.659258e-62	1.091869e-58
MsG0080048992.01	MsG0380016380.01	0.802691	4.975183e-49	2.452830e-46
MsG0080049008.01	MsG0380016380.01	-0.819703	1.010184e-52	7.831547e-50
MsG0080049015.01	MsG0380016380.01	0.825007	5.926993e-54	5.336943e-51
MsG0080049019.01	MsG0380016380.01	0.809089	2.248216e-50	1.307756e-47
MsG0080049023.01	MsG0380016380.01	0.839201	1.825445e-57	2.502632e-54
MsG0080049024.01	MsG0380016380.01	0.837391	5.342994e-57	6.929808e-54
MsG0080049038.01	MsG0380016380.01	0.885008	1.177377e-71	7.947149e-68
MsG0080049066.01	MsG0380016380.01	0.862607	4.496077e-64	1.324412e-60
MsG0180000367.01	MsG0380016380.01	-0.846068	2.739255e-59	4.658708e-56
MsG0180000417.01	MsG0380016380.01	0.811467	6.901440e-51	4.275294e-48
MsG0180000423.01	MsG0380016380.01	0.814083	1.845747e-51	1.226587e-48
MsG0180000467.01	MsG0380016380.01	0.834227	3.385744e-56	3.992310e-53
MsG0180000497.01	MsG0380016380.01	-0.814661	1.374999e-51	9.281676e-49
MsG0180000583.01	MsG0380016380.01	-0.848098	7.609782e-60	1.381030e-56
MsG0180000719.01	MsG0380016380.01	0.839505	1.522578e-57	2.106964e-54
MsG0180000763.01	MsG0380016380.01	-0.800880	1.171258e-48	5.515398e-46
MsG0180001054.01	MsG0380016380.01	0.843646	1.232824e-58	1.941754e-55
MsG0180001072.01	MsG0380016380.01	0.840138	1.041372e-57	1.469746e-54
MsG0180001137.01	MsG0380016380.01	0.839659	1.388112e-57	1.929873e-54
MsG0180001147.01	MsG0380016380.01	0.828152	1.053783e-54	1.038779e-51
MsG0180001264.01	MsG0380016380.01	-0.827279	1.707830e-54	1.641182e-51
MsG0180001290.01	MsG0380016380.01	-0.825795	3.856852e-54	3.551649e-51
MsG0180001614.01	MsG0380016380.01	0.836825	7.458780e-57	9.509464e-54
MsG0180001925.01	MsG0380016380.01	0.820436	6.864547e-53	5.431412e-50
MsG0180002021.01	MsG0380016380.01	0.810836	9.456913e-51	5.761517e-48
MsG0180002099.01	MsG0380016380.01	0.827629	1.407560e-54	1.366261e-51
MsG0180002808.01	MsG0380016380.01	-0.805776	1.133682e-49	6.050372e-47
MsG0180002809.01	MsG0380016380.01	0.800072	1.710597e-48	7.891382e-46
MsG0180003114.01	MsG0380016380.01	0.813168	2.933836e-51	1.901763e-48
MsG0180003235.01	MsG0380016380.01	-0.803304	3.715722e-49	1.860765e-46
MsG0180003351.01	MsG0380016380.01	0.826187	3.112690e-54	2.898387e-51
MsG0180003405.01	MsG0380016380.01	0.868162	8.016437e-66	2.871305e-62
MsG0180003484.01	MsG0380016380.01	-0.840165	1.024819e-57	1.447632e-54
MsG0180003504.01	MsG0380016380.01	-0.815222	1.032461e-51	7.075838e-49
MsG0180003617.01	MsG0380016380.01	0.804160	2.467646e-49	1.263281e-46
MsG0180003757.01	MsG0380016380.01	0.842078	3.221129e-58	4.828831e-55
MsG0180003758.01	MsG0380016380.01	0.849364	3.391328e-60	6.414302e-57
MsG0180003779.01	MsG0380016380.01	0.809566	1.776269e-50	1.046482e-47
MsG0180003880.01	MsG0380016380.01	0.806588	7.646728e-50	4.166321e-47
MsG0180003904.01	MsG0380016380.01	0.822280	2.577157e-53	2.147472e-50
MsG0180003905.01	MsG0380016380.01	-0.838296	3.129128e-57	4.172487e-54
MsG0180003985.01	MsG0380016380.01	0.813781	2.150727e-51	1.417621e-48
MsG0180004124.01	MsG0380016380.01	0.856417	3.263824e-62	7.785012e-59
MsG0180004125.01	MsG0380016380.01	0.859918	2.965761e-63	7.963715e-60
MsG0180004322.01	MsG0380016380.01	0.855680	5.362475e-62	1.248103e-58
MsG0180004553.01	MsG0380016380.01	0.825073	5.719621e-54	5.159571e-51
MsG0180004580.01	MsG0380016380.01	0.826866	2.144289e-54	2.035680e-51
MsG0180004581.01	MsG0380016380.01	0.848560	5.669858e-60	1.044621e-56
MsG0180004705.01	MsG0380016380.01	-0.817341	3.467474e-52	2.518493e-49
MsG0180004714.01	MsG0380016380.01	0.872030	4.347863e-67	1.791783e-63
MsG0180004731.01	MsG0380016380.01	0.823000	1.753065e-53	1.490959e-50
MsG0180004737.01	MsG0380016380.01	0.862086	6.502147e-64	1.880603e-60
MsG0180004773.01	MsG0380016380.01	0.811123	8.195066e-51	5.030748e-48
MsG0180004787.01	MsG0380016380.01	0.814026	1.899886e-51	1.260634e-48
MsG0180005369.01	MsG0380016380.01	0.878845	2.019044e-69	1.070129e-65
MsG0180005474.01	MsG0380016380.01	0.857232	1.877981e-62	4.603171e-59
MsG0180005666.01	MsG0380016380.01	0.810328	1.217379e-50	7.316754e-48
MsG0180005672.01	MsG0380016380.01	0.800119	1.673683e-48	7.730137e-46
MsG0180005681.01	MsG0380016380.01	-0.830783	2.417150e-55	2.572712e-52
MsG0180005783.01	MsG0380016380.01	0.833240	5.974338e-56	6.839613e-53
MsG0180005819.01	MsG0380016380.01	-0.885464	7.953599e-72	5.464286e-68
MsG0180005833.01	MsG0380016380.01	0.840128	1.047696e-57	1.478193e-54
MsG0180005848.01	MsG0380016380.01	0.859551	3.823702e-63	1.013754e-59
MsG0180005984.01	MsG0380016380.01	-0.834763	2.483508e-56	2.975708e-53
MsG0180006063.01	MsG0380016380.01	0.819455	1.150859e-52	8.860790e-50
MsG0180006076.01	MsG0380016380.01	0.821191	4.603852e-53	3.720052e-50
MsG0180006110.01	MsG0380016380.01	-0.802664	5.038867e-49	2.482468e-46
MsG0180006116.01	MsG0380016380.01	-0.817777	2.766182e-52	2.033290e-49
MsG0180006212.01	MsG0380016380.01	0.841410	4.832395e-58	7.094780e-55
MsG0180006227.01	MsG0380016380.01	0.834929	2.255362e-56	2.716190e-53
MsG0280006381.01	MsG0380016380.01	0.860308	2.260675e-63	6.151831e-60
MsG0280010605.01	MsG0380016380.01	0.804334	2.270361e-49	1.167482e-46
MsG0280010606.01	MsG0380016380.01	0.834780	2.458305e-56	2.947011e-53
MsG0280010780.01	MsG0380016380.01	0.857460	1.608460e-62	3.972850e-59
MsG0280010854.01	MsG0380016380.01	0.811052	8.488653e-51	5.201472e-48
MsG0280010944.01	MsG0380016380.01	-0.816195	6.268478e-52	4.412364e-49
MsG0280010994.01	MsG0380016380.01	0.816436	5.535903e-52	3.922227e-49
MsG0280011050.01	MsG0380016380.01	-0.809305	2.020706e-50	1.182217e-47
MsG0280011236.01	MsG0380016380.01	-0.829385	5.301400e-55	5.417919e-52
MsG0280011269.01	MsG0380016380.01	-0.845251	4.564043e-59	7.560557e-56
MsG0280011281.01	MsG0380016380.01	0.867562	1.249283e-65	4.381102e-62
MsG0280011299.01	MsG0380016380.01	0.808329	3.266897e-50	1.862715e-47
MsG0280011301.01	MsG0380016380.01	0.858588	7.431710e-63	1.906161e-59
MsG0280011475.01	MsG0380016380.01	0.855583	5.723866e-62	1.327792e-58
MsG0380012148.01	MsG0380016380.01	0.865390	6.112863e-65	1.985434e-61
MsG0380012157.01	MsG0380016380.01	0.828175	1.040612e-54	1.026454e-51
MsG0380012281.01	MsG0380016380.01	0.824062	9.890172e-54	8.666949e-51
MsG0380013114.01	MsG0380016380.01	0.847971	8.250280e-60	1.491428e-56
MsG0380013473.01	MsG0380016380.01	0.848801	4.862856e-60	9.029957e-57
MsG0380013506.01	MsG0380016380.01	0.810318	1.223488e-50	7.351520e-48
MsG0380013921.01	MsG0380016380.01	0.842037	3.301164e-58	4.942175e-55
MsG0380013928.01	MsG0380016380.01	0.826792	2.233749e-54	2.116079e-51
MsG0380013956.01	MsG0380016380.01	0.802378	5.771071e-49	2.822805e-46
MsG0380014020.01	MsG0380016380.01	0.821822	3.291019e-53	2.706746e-50
MsG0380014029.01	MsG0380016380.01	0.820889	5.404200e-53	4.330098e-50
MsG0380014231.01	MsG0380016380.01	0.838452	2.852266e-57	3.822027e-54
MsG0380014639.01	MsG0380016380.01	0.879401	1.284221e-69	6.953295e-66
MsG0380014642.01	MsG0380016380.01	0.873519	1.380738e-67	6.010564e-64
MsG0380014735.01	MsG0380016380.01	0.887228	1.715070e-72	1.264809e-68
MsG0380014864.01	MsG0380016380.01	0.815102	1.098170e-51	7.501340e-49
MsG0380015200.01	MsG0380016380.01	0.804374	2.227591e-49	1.146680e-46
MsG0380015201.01	MsG0380016380.01	0.827502	1.509999e-54	1.460469e-51
MsG0380015271.01	MsG0380016380.01	0.837767	4.280879e-57	5.618141e-54
MsG0380015323.01	MsG0380016380.01	-0.827632	1.405459e-54	1.364341e-51
MsG0380015370.01	MsG0380016380.01	-0.847323	1.243316e-59	2.201503e-56
MsG0380015616.01	MsG0380016380.01	-0.804016	2.644915e-49	1.349050e-46
MsG0380015656.01	MsG0380016380.01	-0.817601	3.029486e-52	2.216069e-49
MsG0380015719.01	MsG0380016380.01	0.834719	2.548096e-56	3.048932e-53
MsG0380015752.01	MsG0380016380.01	0.827628	1.408541e-54	1.367164e-51
MsG0380015802.01	MsG0380016380.01	0.807147	5.826780e-50	3.220851e-47
MsG0380015828.01	MsG0380016380.01	0.850423	1.714497e-60	3.356919e-57
MsG0380015871.01	MsG0380016380.01	-0.827243	1.742585e-54	1.672808e-51
MsG0380016056.01	MsG0380016380.01	0.802921	4.459332e-49	2.211446e-46
MsG0380016065.01	MsG0380016380.01	0.802899	4.507686e-49	2.234186e-46
MsG0380016096.01	MsG0380016380.01	0.818572	1.827259e-52	1.372811e-49
MsG0380016110.01	MsG0380016380.01	-0.839746	1.317616e-57	1.836784e-54
MsG0380016229.01	MsG0380016380.01	0.842569	2.387050e-58	3.634223e-55
MsG0380016241.01	MsG0380016380.01	0.816810	4.562981e-52	3.266340e-49
MsG0380016250.01	MsG0380016380.01	-0.821397	4.126831e-53	3.353614e-50
MsG0380016380.01	MsG0380016456.01	0.857982	1.125784e-62	2.829799e-59
MsG0380016380.01	MsG0380016485.01	-0.812160	4.875824e-51	3.077054e-48
MsG0380016380.01	MsG0380016717.01	-0.828551	8.441823e-55	8.418660e-52
MsG0380016380.01	MsG0380016790.01	0.819637	1.046266e-52	8.095889e-50
MsG0380016380.01	MsG0380016801.01	-0.804035	2.620781e-49	1.337399e-46
MsG0380016380.01	MsG0380016835.01	0.835990	1.216254e-56	1.512193e-53
MsG0380016380.01	MsG0380016889.01	0.835723	1.421680e-56	1.753413e-53
MsG0380016380.01	MsG0380016931.01	0.833638	4.753601e-56	5.506934e-53
MsG0380016380.01	MsG0380016934.01	0.874922	4.623620e-68	2.119405e-64
MsG0380016380.01	MsG0380016935.01	0.883490	4.293572e-71	2.727627e-67
MsG0380016380.01	MsG0380016960.01	0.832003	1.211259e-55	1.336656e-52
MsG0380016380.01	MsG0380017030.01	-0.839203	1.823563e-57	2.500203e-54
MsG0380016380.01	MsG0380017405.01	0.860347	2.200030e-63	5.994872e-60
MsG0380016380.01	MsG0380017406.01	0.844063	9.535075e-59	1.521473e-55
MsG0380016380.01	MsG0380017594.01	-0.819430	1.166180e-52	8.972117e-50
MsG0380016380.01	MsG0380017812.01	0.851797	7.022570e-61	1.437781e-57
MsG0380016380.01	MsG0380017826.01	-0.810781	9.715988e-51	5.910774e-48
MsG0380016380.01	MsG0380017895.01	0.805910	1.062614e-49	5.690439e-47
MsG0380016380.01	MsG0380017928.01	0.840356	9.134799e-58	1.297843e-54
MsG0380016380.01	MsG0380017962.01	0.849160	3.865253e-60	7.263308e-57
MsG0380016380.01	MsG0380017967.01	-0.835090	2.053919e-56	2.485330e-53
MsG0380016380.01	MsG0380018035.01	0.832060	1.172669e-55	1.296179e-52
MsG0380016380.01	MsG0380018072.01	0.823760	1.164344e-53	1.011827e-50
MsG0380016380.01	MsG0480018201.01	0.859254	4.696198e-63	1.232352e-59
MsG0380016380.01	MsG0480018202.01	0.868007	8.985720e-66	3.200337e-62
MsG0380016380.01	MsG0480018203.01	0.862815	3.879654e-64	1.151504e-60
MsG0380016380.01	MsG0480018486.01	-0.866123	3.588815e-65	1.196273e-61
MsG0380016380.01	MsG0480018628.01	0.839501	1.526024e-57	2.111484e-54
MsG0380016380.01	MsG0480019046.01	0.812514	4.081134e-51	2.600114e-48
MsG0380016380.01	MsG0480019183.01	0.834909	2.281877e-56	2.746445e-53
MsG0380016380.01	MsG0480019861.01	0.825876	3.690380e-54	3.406120e-51
MsG0380016380.01	MsG0480020269.01	0.811367	7.253484e-51	4.481429e-48
MsG0380016380.01	MsG0480020550.01	0.812866	3.417841e-51	2.197579e-48
MsG0380016380.01	MsG0480020841.01	0.810915	9.089056e-51	5.549357e-48
MsG0380016380.01	MsG0480020842.01	0.825696	4.072007e-54	3.739016e-51
MsG0380016380.01	MsG0480020938.01	0.859806	3.205667e-63	8.574386e-60
MsG0380016380.01	MsG0480020957.01	-0.814971	1.174175e-51	7.992466e-49
MsG0380016380.01	MsG0480021175.01	-0.830439	2.934903e-55	3.092149e-52
MsG0380016380.01	MsG0480021205.01	0.807999	3.840846e-50	2.170882e-47
MsG0380016380.01	MsG0480021226.01	-0.847378	1.201470e-59	2.131342e-56
MsG0380016380.01	MsG0480021231.01	-0.809872	1.526474e-50	9.065984e-48
MsG0380016380.01	MsG0480021327.01	0.842330	2.762625e-58	4.174623e-55
MsG0380016380.01	MsG0480021331.01	0.831260	1.846060e-55	1.992567e-52
MsG0380016380.01	MsG0480021433.01	-0.845911	3.021984e-59	5.114131e-56
MsG0380016380.01	MsG0480021967.01	0.837930	3.885679e-57	5.124548e-54
MsG0380016380.01	MsG0480021977.01	-0.834401	3.061393e-56	3.629181e-53
MsG0380016380.01	MsG0480022142.01	-0.808192	3.494942e-50	1.985504e-47
MsG0380016380.01	MsG0480022241.01	0.844580	6.922918e-59	1.122700e-55
MsG0380016380.01	MsG0480022242.01	0.868496	6.253161e-66	2.266742e-62
MsG0380016380.01	MsG0480022244.01	0.848535	5.761662e-60	1.060690e-56
MsG0380016380.01	MsG0480022428.01	-0.820246	7.590535e-53	5.974100e-50
MsG0380016380.01	MsG0480022584.01	0.825826	3.793417e-54	3.496117e-51
MsG0380016380.01	MsG0480022591.01	0.809317	2.008999e-50	1.175727e-47
MsG0380016380.01	MsG0480022687.01	0.858817	6.347771e-63	1.641095e-59
MsG0380016380.01	MsG0480022721.01	-0.829129	6.117019e-55	6.204168e-52
MsG0380016380.01	MsG0480022765.01	0.844875	5.765249e-59	9.436137e-56
MsG0380016380.01	MsG0480022833.01	-0.810390	1.180754e-50	7.107962e-48
MsG0380016380.01	MsG0480023067.01	-0.905124	5.979128e-80	9.535459e-76
MsG0380016380.01	MsG0480023103.01	0.846759	1.774806e-59	3.086798e-56
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MsG0280009167.01	MsG0380016380.01	-0.854570	1.127149e-61	2.528275e-58
MsG0280009526.01	MsG0380016380.01	-0.878625	2.414268e-69	1.269638e-65
MsG0280009742.01	MsG0380016380.01	0.873846	1.071026e-67	4.716489e-64
MsG0280009776.01	MsG0380016380.01	0.800703	1.272461e-48	5.964646e-46
MsG0280009864.01	MsG0380016380.01	0.865102	7.532463e-65	2.421560e-61
MsG0280010142.01	MsG0380016380.01	0.818761	1.655824e-52	1.250582e-49
MsG0280010149.01	MsG0380016380.01	0.823305	1.488236e-53	1.276572e-50
MsG0280010240.01	MsG0380016380.01	-0.803513	3.364180e-49	1.693885e-46
MsG0280010356.01	MsG0380016380.01	0.800213	1.601718e-48	7.415531e-46

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380016380.01.T01	MTR_3g088400	92.941	170	9	2	1	168	1	169	3.51e-95	273

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380016380.01.T01	AT1G77400	32.203	236	85	9	2	168	3	232	1.79e-15	71.6

Find 65 sgRNAs with CRISPR-Local

Find 68 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AGCTTGAATGAGGGAGATTC+CGG	0.280355	3:+82683123	None:intergenic
CATTTGAATGGAACTGATCC+TGG	0.357724	3:+82683195	None:intergenic
ACGGCCCCTTCTTGCGCAAC+CGG	0.388573	3:-82682995	MsG0380016380.01.T01:CDS
CGCACTCCGGTTGCGCAAGA+AGG	0.392092	3:+82682989	None:intergenic
CAGGATCAGTTCCATTCAAA+TGG	0.392591	3:-82683194	MsG0380016380.01.T01:CDS
GGTTTGATTTCCCATTTGAA+TGG	0.399102	3:+82683183	None:intergenic
TGATGATGGTGGTGAGGAAT+GGG	0.403240	3:+82683153	None:intergenic
CTAAGTCCTTGTCGCCGTTC+CGG	0.421562	3:-82682828	MsG0380016380.01.T01:CDS
CTCCGTAGCCGCTTCAGAAA+AGG	0.423405	3:+82682940	None:intergenic
TTCTGAAGCGGCTACGGAGC+AGG	0.428600	3:-82682936	MsG0380016380.01.T01:CDS
TCCAGTTCCGATGTATAATC+AGG	0.433268	3:+82682886	None:intergenic
CCGGAGTGCGTGACTTCGTC+AGG	0.434551	3:-82682976	MsG0380016380.01.T01:CDS
TTGGTGATGCTGAATGGGCT+TGG	0.438084	3:-82682759	MsG0380016380.01.T01:CDS
GCTTGAATGAGGGAGATTCC+GGG	0.452305	3:+82683124	None:intergenic
ACCTGATTATACATCGGAAC+TGG	0.454932	3:-82682887	MsG0380016380.01.T01:CDS
ATGATGATGGTGGTGAGGAA+TGG	0.456155	3:+82683152	None:intergenic
TGGTGAGGAATGGGGAGTCC+TGG	0.459210	3:+82683162	None:intergenic
CTCCTTCCGGTCAAGTCCTA+AGG	0.468786	3:-82683043	MsG0380016380.01.T01:CDS
ACCCATTGGTGATGCTGAAT+GGG	0.470201	3:-82682764	MsG0380016380.01.T01:CDS
ATTCCCGTACACGCTCCTTC+CGG	0.478158	3:-82683056	MsG0380016380.01.T01:CDS
GATGCTGAATGGGCTTGGTT+CGG	0.481588	3:-82682754	MsG0380016380.01.T01:CDS
GCACTCCGGTTGCGCAAGAA+GGG	0.484553	3:+82682990	None:intergenic
CATCTCTCAGAACCGACCTT+AGG	0.491967	3:+82683027	None:intergenic
GCCCATTCAGCATCACCAAT+GGG	0.491981	3:+82682763	None:intergenic
ACATCGGAACTGGAGACAAT+TGG	0.496458	3:-82682877	MsG0380016380.01.T01:CDS
AACCCATTGGTGATGCTGAA+TGG	0.502313	3:-82682765	MsG0380016380.01.T01:CDS
TTGACCGGAAGGAGCGTGTA+CGG	0.502706	3:+82683052	None:intergenic
TAGGAGCCGAGTTGCGGTGG+AGG	0.502809	3:+82683096	None:intergenic
TGGAGGTTTGAGCTTGAATG+AGG	0.505731	3:+82683113	None:intergenic
CTGAGAGATGGCGGTTTGAA+CGG	0.517905	3:-82683014	MsG0380016380.01.T01:CDS
GATGATTCATTCAAGAAGCC+AGG	0.528926	3:-82683213	MsG0380016380.01.T01:CDS
CAAATTCAAAACAATGGTTG+TGG	0.535320	3:-82683241	None:intergenic
ATAGAAGACGACACGGTTGA+AGG	0.536946	3:+82682802	None:intergenic
AGGATCAGTTCCATTCAAAT+GGG	0.539229	3:-82683193	MsG0380016380.01.T01:CDS
CTCCTACAAGTTATCTCCGG+TGG	0.542586	3:-82683079	MsG0380016380.01.T01:CDS
TGACCGGAAGGAGCGTGTAC+GGG	0.549214	3:+82683053	None:intergenic
TCAGCATCACCAATGGGTTG+TGG	0.553882	3:+82682769	None:intergenic
CGGCTCCTACAAGTTATCTC+CGG	0.555895	3:-82683082	MsG0380016380.01.T01:CDS
CTAAGGTCGGTTCTGAGAGA+TGG	0.555995	3:-82683026	MsG0380016380.01.T01:CDS
AACCGACCTTAGGACTTGAC+CGG	0.564275	3:+82683037	None:intergenic
ACGGTTGAAGGCCGCCGGAA+CGG	0.564700	3:+82682814	None:intergenic
TTGTAGGAGCCGAGTTGCGG+TGG	0.564820	3:+82683093	None:intergenic
AGCCCATTCAGCATCACCAA+TGG	0.565303	3:+82682762	None:intergenic
AACTTGTAGGAGCCGAGTTG+CGG	0.574364	3:+82683090	None:intergenic
TTCAAATGGGAAATCAAACC+AGG	0.594700	3:-82683180	MsG0380016380.01.T01:CDS
CACTCCGGTTGCGCAAGAAG+GGG	0.595751	3:+82682991	None:intergenic
ATCCACCGGAGATAACTTGT+AGG	0.597714	3:+82683077	None:intergenic
GGAGGTTTGAGCTTGAATGA+GGG	0.597771	3:+82683114	None:intergenic
GATGATGGTGGTGAGGAATG+GGG	0.602221	3:+82683154	None:intergenic
AGGCCGCCGGAACGGCGACA+AGG	0.608271	3:+82682822	None:intergenic
CTCAAACCTCCACCGCAACT+CGG	0.610739	3:-82683102	MsG0380016380.01.T01:CDS
TTCCGGTCAAGTCCTAAGGT+CGG	0.611011	3:-82683039	MsG0380016380.01.T01:CDS
ATTCAAAACAATGGTTGTGG+CGG	0.614374	3:-82683238	None:intergenic
CCACCATCATCATCAAAACC+CGG	0.614647	3:-82683142	MsG0380016380.01.T01:CDS
GAGCGTGTACGGGAATCCAC+CGG	0.615955	3:+82683063	None:intergenic
ACGACACGGTTGAAGGCCGC+CGG	0.618792	3:+82682809	None:intergenic
GCGTCGTCACCACAACCCAT+TGG	0.619177	3:-82682778	MsG0380016380.01.T01:CDS
CCTGACGAAGTCACGCACTC+CGG	0.625012	3:+82682976	None:intergenic
AGTCCTTGTCGCCGTTCCGG+CGG	0.638705	3:-82682825	MsG0380016380.01.T01:CDS
GACCTTAGGACTTGACCGGA+AGG	0.639720	3:+82683041	None:intergenic
AGGTCGGTTCTGAGAGATGG+CGG	0.643746	3:-82683023	MsG0380016380.01.T01:CDS
AACTGGAGACAATTGGTCGG+TGG	0.665926	3:-82682870	MsG0380016380.01.T01:CDS
CGGAACTGGAGACAATTGGT+CGG	0.666930	3:-82682873	MsG0380016380.01.T01:CDS
TGTCGAACCTGATTATACAT+CGG	0.676761	3:-82682893	MsG0380016380.01.T01:CDS
CGACGCAATAGAAGACGACA+CGG	0.728617	3:+82682795	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
	AGGATCAGTTCCATTCAAAT+GGG	-	Chr3:82682779-82682798	MsG0380016380.01.T01:CDS	35.0%
	TGTCGAACCTGATTATACAT+CGG	-	Chr3:82683079-82683098	MsG0380016380.01.T01:CDS	35.0%
	TTCAAATGGGAAATCAAACC+AGG	-	Chr3:82682792-82682811	MsG0380016380.01.T01:CDS	35.0%
!	GGTTTGATTTCCCATTTGAA+TGG	+	Chr3:82682792-82682811	None:intergenic	35.0%
	ACCTGATTATACATCGGAAC+TGG	-	Chr3:82683085-82683104	MsG0380016380.01.T01:CDS	40.0%
	CAGGATCAGTTCCATTCAAA+TGG	-	Chr3:82682778-82682797	MsG0380016380.01.T01:CDS	40.0%
	CATTTGAATGGAACTGATCC+TGG	+	Chr3:82682780-82682799	None:intergenic	40.0%
	GATGATTCATTCAAGAAGCC+AGG	-	Chr3:82682759-82682778	MsG0380016380.01.T01:CDS	40.0%
	TCCAGTTCCGATGTATAATC+AGG	+	Chr3:82683089-82683108	None:intergenic	40.0%
!!!	ATTCCGGGTTTTGATGATGA+TGG	+	Chr3:82682836-82682855	None:intergenic	40.0%
!!!	TTTTGATGATGATGGTGGTG+AGG	+	Chr3:82682828-82682847	None:intergenic	40.0%
	ACATCGGAACTGGAGACAAT+TGG	-	Chr3:82683095-82683114	MsG0380016380.01.T01:CDS	45.0%
	AGCTTGAATGAGGGAGATTC+CGG	+	Chr3:82682852-82682871	None:intergenic	45.0%
	ATAGAAGACGACACGGTTGA+AGG	+	Chr3:82683173-82683192	None:intergenic	45.0%
	CCACCATCATCATCAAAACC+CGG	-	Chr3:82682830-82682849	MsG0380016380.01.T01:CDS	45.0%
	GGAGGTTTGAGCTTGAATGA+GGG	+	Chr3:82682861-82682880	None:intergenic	45.0%
	TGGAGGTTTGAGCTTGAATG+AGG	+	Chr3:82682862-82682881	None:intergenic	45.0%
!	ATCCACCGGAGATAACTTGT+AGG	+	Chr3:82682898-82682917	None:intergenic	45.0%
!!	AACCCATTGGTGATGCTGAA+TGG	-	Chr3:82683207-82683226	MsG0380016380.01.T01:CDS	45.0%
!!	ACCCATTGGTGATGCTGAAT+GGG	-	Chr3:82683208-82683227	MsG0380016380.01.T01:CDS	45.0%
!!	ATGATGATGGTGGTGAGGAA+TGG	+	Chr3:82682823-82682842	None:intergenic	45.0%
!!	TCTTCTCGCCTTTTCTGAAG+CGG	-	Chr3:82683024-82683043	MsG0380016380.01.T01:CDS	45.0%
!!	TGATGATGGTGGTGAGGAAT+GGG	+	Chr3:82682822-82682841	None:intergenic	45.0%
	AACCGACCTTAGGACTTGAC+CGG	+	Chr3:82682938-82682957	None:intergenic	50.0%
	AACTGGAGACAATTGGTCGG+TGG	-	Chr3:82683102-82683121	MsG0380016380.01.T01:CDS	50.0%
	AACTTGTAGGAGCCGAGTTG+CGG	+	Chr3:82682885-82682904	None:intergenic	50.0%
	AGCCCATTCAGCATCACCAA+TGG	+	Chr3:82683213-82683232	None:intergenic	50.0%
	CATCTCTCAGAACCGACCTT+AGG	+	Chr3:82682948-82682967	None:intergenic	50.0%
	CGACGCAATAGAAGACGACA+CGG	+	Chr3:82683180-82683199	None:intergenic	50.0%
	CGGAACTGGAGACAATTGGT+CGG	-	Chr3:82683099-82683118	MsG0380016380.01.T01:CDS	50.0%
	CGGCTCCTACAAGTTATCTC+CGG	-	Chr3:82682890-82682909	MsG0380016380.01.T01:CDS	50.0%
	CTCCTACAAGTTATCTCCGG+TGG	-	Chr3:82682893-82682912	MsG0380016380.01.T01:CDS	50.0%
	GCCCATTCAGCATCACCAAT+GGG	+	Chr3:82683212-82683231	None:intergenic	50.0%
	GCTTGAATGAGGGAGATTCC+GGG	+	Chr3:82682851-82682870	None:intergenic	50.0%
	TTCCGGTCAAGTCCTAAGGT+CGG	-	Chr3:82682933-82682952	MsG0380016380.01.T01:CDS	50.0%
!	CTGAGAGATGGCGGTTTGAA+CGG	-	Chr3:82682958-82682977	MsG0380016380.01.T01:CDS	50.0%
!	GATGCTGAATGGGCTTGGTT+CGG	-	Chr3:82683218-82683237	MsG0380016380.01.T01:CDS	50.0%
!!	CTAAGGTCGGTTCTGAGAGA+TGG	-	Chr3:82682946-82682965	MsG0380016380.01.T01:CDS	50.0%
!!	GATGATGGTGGTGAGGAATG+GGG	+	Chr3:82682821-82682840	None:intergenic	50.0%
!!	TCAGCATCACCAATGGGTTG+TGG	+	Chr3:82683206-82683225	None:intergenic	50.0%
!!	TTGGTGATGCTGAATGGGCT+TGG	-	Chr3:82683213-82683232	MsG0380016380.01.T01:CDS	50.0%
!!!	CCGGGTTTTGATGATGATGG+TGG	+	Chr3:82682833-82682852	None:intergenic	50.0%
	ATTCCCGTACACGCTCCTTC+CGG	-	Chr3:82682916-82682935	MsG0380016380.01.T01:CDS	55.0%
	CTAAGTCCTTGTCGCCGTTC+CGG	-	Chr3:82683144-82683163	MsG0380016380.01.T01:CDS	55.0%
	CTCAAACCTCCACCGCAACT+CGG	-	Chr3:82682870-82682889	MsG0380016380.01.T01:CDS	55.0%
	CTCCGTAGCCGCTTCAGAAA+AGG	+	Chr3:82683035-82683054	None:intergenic	55.0%
	CTCCTTCCGGTCAAGTCCTA+AGG	-	Chr3:82682929-82682948	MsG0380016380.01.T01:CDS	55.0%
	GACCTTAGGACTTGACCGGA+AGG	+	Chr3:82682934-82682953	None:intergenic	55.0%
!	TTGACCGGAAGGAGCGTGTA+CGG	+	Chr3:82682923-82682942	None:intergenic	55.0%
!!	AGGTCGGTTCTGAGAGATGG+CGG	-	Chr3:82682949-82682968	MsG0380016380.01.T01:CDS	55.0%
!!!	CGCCTTTTCTGAAGCGGCTA+CGG	-	Chr3:82683030-82683049	MsG0380016380.01.T01:CDS	55.0%
	CACTCCGGTTGCGCAAGAAG+GGG	+	Chr3:82682984-82683003	None:intergenic	60.0%
	CCTGACGAAGTCACGCACTC+CGG	+	Chr3:82682999-82683018	None:intergenic	60.0%
	GAGCGTGTACGGGAATCCAC+CGG	+	Chr3:82682912-82682931	None:intergenic	60.0%
	GCACTCCGGTTGCGCAAGAA+GGG	+	Chr3:82682985-82683004	None:intergenic	60.0%
	GCGTCGTCACCACAACCCAT+TGG	-	Chr3:82683194-82683213	MsG0380016380.01.T01:CDS	60.0%
	TGGTGAGGAATGGGGAGTCC+TGG	+	Chr3:82682813-82682832	None:intergenic	60.0%
	TTGTAGGAGCCGAGTTGCGG+TGG	+	Chr3:82682882-82682901	None:intergenic	60.0%
!	TGACCGGAAGGAGCGTGTAC+GGG	+	Chr3:82682922-82682941	None:intergenic	60.0%
!!	TTCTGAAGCGGCTACGGAGC+AGG	-	Chr3:82683036-82683055	MsG0380016380.01.T01:CDS	60.0%
	ACGACACGGTTGAAGGCCGC+CGG	+	Chr3:82683166-82683185	None:intergenic	65.0%
	ACGGCCCCTTCTTGCGCAAC+CGG	-	Chr3:82682977-82682996	MsG0380016380.01.T01:CDS	65.0%
	ACGGTTGAAGGCCGCCGGAA+CGG	+	Chr3:82683161-82683180	None:intergenic	65.0%
	AGTCCTTGTCGCCGTTCCGG+CGG	-	Chr3:82683147-82683166	MsG0380016380.01.T01:CDS	65.0%
	CCGGAGTGCGTGACTTCGTC+AGG	-	Chr3:82682996-82683015	MsG0380016380.01.T01:CDS	65.0%
	CGCACTCCGGTTGCGCAAGA+AGG	+	Chr3:82682986-82683005	None:intergenic	65.0%
	TAGGAGCCGAGTTGCGGTGG+AGG	+	Chr3:82682879-82682898	None:intergenic	65.0%
	AGGCCGCCGGAACGGCGACA+AGG	+	Chr3:82683153-82683172	None:intergenic	75.0%

Chromosome	Type	Strat	End	Strand	Name
Chr3	gene	82682744	82683250	82682744	ID=MsG0380016380.01;Name=MsG0380016380.01
Chr3	mRNA	82682744	82683250	82682744	ID=MsG0380016380.01.T01;Parent=MsG0380016380.01;Name=MsG0380016380.01.T01;_AED=0.48;_eAED=0.48;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|168
Chr3	exon	82682744	82683250	82682744	ID=MsG0380016380.01.T01:exon:33162;Parent=MsG0380016380.01.T01
Chr3	CDS	82682744	82683250	82682744	ID=MsG0380016380.01.T01:cds;Parent=MsG0380016380.01.T01

Gene Sequence

>MsG0380016380.01.T01

ATGGTTGTGGCGGAAGATGATTCATTCAAGAAGCCAGGATCAGTTCCATTCAAATGGGAAATCAAACCAGGACTCCCCATTCCTCACCACCATCATCATCAAAACCCGGAATCTCCCTCATTCAAGCTCAAACCTCCACCGCAACTCGGCTCCTACAAGTTATCTCCGGTGGATTCCCGTACACGCTCCTTCCGGTCAAGTCCTAAGGTCGGTTCTGAGAGATGGCGGTTTGAACGGCCCCTTCTTGCGCAACCGGAGTGCGTGACTTCGTCAGGTTGTTTCTTCTCGCCTTTTCTGAAGCGGCTACGGAGCAGGAAGAAGCTTGTGAAGAAAGTTGTCGAACCTGATTATACATCGGAACTGGAGACAATTGGTCGGTGGTCATTTTCGTCGTCTACTACTAAGTCCTTGTCGCCGTTCCGGCGGCCTTCAACCGTGTCGTCTTCTATTGCGTCGTCACCACAACCCATTGGTGATGCTGAATGGGCTTGGTTCGGTCTTTTCTGA

Protein sequence

>MsG0380016380.01.T01

MVVAEDDSFKKPGSVPFKWEIKPGLPIPHHHHHQNPESPSFKLKPPPQLGSYKLSPVDSRTRSFRSSPKVGSERWRFERPLLAQPECVTSSGCFFSPFLKRLRSRKKLVKKVVEPDYTSELETIGRWSFSSSTTKSLSPFRRPSTVSSSIASSPQPIGDAEWAWFGLF*