AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380017967.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017967.01.T01 MTR_3g115980 94.953 634 14 2 1 633 1 617 0.0 1226
MsG0380017967.01.T01 MTR_1g094870 52.183 481 210 3 4 483 8 469 1.53e-167 487
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017967.01.T01 AT1G76400 66.502 609 186 2 25 633 24 614 0.0 833
MsG0380017967.01.T01 AT1G76400 65.996 547 168 2 25 571 24 552 0.0 741
MsG0380017967.01.T01 AT2G01720 51.158 475 205 5 14 482 10 463 3.62e-161 470

Find 174 sgRNAs with CRISPR-Local

Find 517 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAGACTTCTGCATCTTATT+TGG 0.144569 3:+102716519 MsG0380017967.01.T01:CDS
CATCGTTGCGTGATCTTTCT+AGG 0.176304 3:+102716715 MsG0380017967.01.T01:CDS
CTGGAAATGGTTGCAATATA+TGG 0.199405 3:-102712347 None:intergenic
GAAATAGGTTCTAAATAATA+TGG 0.215298 3:+102717841 MsG0380017967.01.T01:three_prime_UTR
CGCTTCCTTAATATCTCTTT+TGG 0.225268 3:+102713148 MsG0380017967.01.T01:CDS
GAGCCGTTAATGTTGATTTC+TGG 0.228415 3:+102716439 MsG0380017967.01.T01:CDS
GTCAATCACCAAATCATTAA+TGG 0.250801 3:-102713176 None:intergenic
CCACTTCAGGACTTCTTGTT+TGG 0.252717 3:+102713112 MsG0380017967.01.T01:CDS
ACAAGAGATTTATGATCTTA+TGG 0.256694 3:+102717126 MsG0380017967.01.T01:CDS
TCGCCCTTCCCAAGGCCTTT+AGG 0.289486 3:-102712291 None:intergenic
TACTCTTGCGCCTGTATTGC+AGG 0.289724 3:+102716381 MsG0380017967.01.T01:CDS
CGGTTGCTAGCACCATTATT+GGG 0.290327 3:+102717685 MsG0380017967.01.T01:three_prime_UTR
AAGGAAGAGGGAATATCTTT+AGG 0.294373 3:-102712246 None:intergenic
TGTCTTTCTTTCACAGGAAA+TGG 0.294905 3:-102713576 None:intergenic
CTGCTGCAGACTTGACTATC+AGG 0.298525 3:+102712795 MsG0380017967.01.T01:intron
AAGTGCTTTACATGGTTATC+AGG 0.308889 3:-102712138 None:intergenic
TGGATATGGGTTGCCACTTC+AGG 0.311465 3:+102713099 MsG0380017967.01.T01:CDS
TTACTCAGTTGCTTTGTCAT+TGG 0.314079 3:-102717581 None:intergenic
GCTGGAAAATACAAAACTTC+AGG 0.319386 3:+102712500 MsG0380017967.01.T01:CDS
GGGAACCAAAAGAGATATTA+AGG 0.322733 3:-102713153 None:intergenic
TCGGTTGCTAGCACCATTAT+TGG 0.325068 3:+102717684 MsG0380017967.01.T01:three_prime_UTR
TGCTAAGGAGAGAGATTTGC+AGG 0.327633 3:+102716991 MsG0380017967.01.T01:CDS
TCAATCACCAAATCATTAAT+GGG 0.328904 3:-102713175 None:intergenic
TTTAGGGCGGACAACTTCAT+AGG 0.340630 3:-102712229 None:intergenic
TGCAAATCTGCTGCAATTAC+CGG 0.340964 3:+102711158 MsG0380017967.01.T01:five_prime_UTR
AGGGCTGATTATTCTCAAAA+TGG 0.345796 3:-102712587 None:intergenic
TATTTCCACTTCTAGTTTGT+GGG 0.353054 3:+102712915 MsG0380017967.01.T01:CDS
GGGGTGATTTCTGCCTGATC+TGG 0.355307 3:+102717705 MsG0380017967.01.T01:three_prime_UTR
GATTGTTATGAGAAGAAGTT+AGG 0.359037 3:+102717046 MsG0380017967.01.T01:CDS
ATATTTCCACTTCTAGTTTG+TGG 0.370550 3:+102712914 MsG0380017967.01.T01:CDS
GAGCATTATAATCTTGTTCA+TGG 0.371780 3:+102712675 MsG0380017967.01.T01:CDS
TTCTCAAAATGGATAACAAT+TGG 0.382836 3:-102712576 None:intergenic
CAGGGTGGTTTGACTTTAGT+AGG 0.384720 3:+102716349 MsG0380017967.01.T01:intron
GTAACTTTACCTAAAGGCCT+TGG 0.391130 3:+102712282 MsG0380017967.01.T01:CDS
CAGGGATCTGAATTGAAATA+TGG 0.392730 3:+102712519 MsG0380017967.01.T01:CDS
CTGGTTCAGTGAGAGCGTTT+TGG 0.397574 3:+102711186 MsG0380017967.01.T01:five_prime_UTR
AGATTTGCAGGAGAAGCTTA+TGG 0.399523 3:+102717003 MsG0380017967.01.T01:CDS
GGCAGAAATCACCCCAATAA+TGG 0.402679 3:-102717697 None:intergenic
TAAGAGGTGCATCTGCCTTT+AGG 0.408931 3:+102712830 MsG0380017967.01.T01:CDS
AGGAAGAGGGAATATCTTTA+GGG 0.416520 3:-102712245 None:intergenic
GGAAAGGCGAAATCATCTTC+TGG 0.418481 3:+102712195 MsG0380017967.01.T01:CDS
GAGCTCATTCTGTTTACTAC+AGG 0.418845 3:+102712878 MsG0380017967.01.T01:CDS
TGCTTTGTCATTGGATCGTT+AGG 0.422498 3:-102717572 None:intergenic
GATTGGACCTTCACGGGATA+AGG 0.432111 3:-102712432 None:intergenic
GAGGAAGGGAAATTGAAAAT+CGG 0.432426 3:+102717068 MsG0380017967.01.T01:CDS
ATGAGAAGAAGTTAGGAGGA+AGG 0.433364 3:+102717053 MsG0380017967.01.T01:CDS
AAGCCAGAAATCAACATTAA+CGG 0.434432 3:-102716442 None:intergenic
GGATGAGATCGGAGAGGACC+TGG 0.435073 3:-102711312 None:intergenic
CCGCACCACTACCACTCTTA+AGG 0.447901 3:+102711526 MsG0380017967.01.T01:CDS
GTAATTTAACATTGAGCGAT+TGG 0.448219 3:-102712449 None:intergenic
ACCTCATGTCTTTCTTTCAC+AGG 0.448961 3:-102713582 None:intergenic
GACTTCTTGTTTGGAGTCGA+TGG 0.451851 3:+102713121 MsG0380017967.01.T01:CDS
TAACTTTACCTAAAGGCCTT+GGG 0.455605 3:+102712283 MsG0380017967.01.T01:CDS
TTATAATAGACCTGCAATAC+AGG 0.458777 3:-102716391 None:intergenic
GGTTCAAGCAACTATTCATC+AGG 0.459505 3:+102716644 MsG0380017967.01.T01:intron
GTTTACTACAGGGATGAAAT+CGG 0.459929 3:+102712889 MsG0380017967.01.T01:CDS
TATTCTGTAACTTTACCTAA+AGG 0.460646 3:+102712276 MsG0380017967.01.T01:CDS
TTCTTCTCTAGCACGACAAC+AGG 0.460738 3:-102713733 None:intergenic
TCAACCGTCTTTCTATGCTC+AGG 0.463333 3:+102716416 MsG0380017967.01.T01:CDS
ACTCAATAAAAGAGTGCTAA+AGG 0.463882 3:-102717794 None:intergenic
GGAGATTGAGATATCCCATT+GGG 0.465275 3:+102712635 MsG0380017967.01.T01:CDS
AGCAACGACTAATGATACTA+TGG 0.470319 3:-102716668 None:intergenic
TAAAGATATTCCCTCTTCCT+TGG 0.470995 3:+102712248 MsG0380017967.01.T01:CDS
TCTAGGACAGGTGATATTCA+AGG 0.471596 3:+102716732 MsG0380017967.01.T01:CDS
TGGAAATGGTTGCAATATAT+GGG 0.474469 3:-102712346 None:intergenic
TGAGAAGAAGTTAGGAGGAA+GGG 0.475108 3:+102717054 MsG0380017967.01.T01:CDS
CTGGAAAATACAAAACTTCA+GGG 0.476503 3:+102712501 MsG0380017967.01.T01:CDS
TCATCAGGACTTGGTGCAAT+CGG 0.481776 3:+102717665 MsG0380017967.01.T01:three_prime_UTR
AATGGAGGAAGATTCTCATA+TGG 0.481992 3:-102712543 None:intergenic
GCGAAATCATCTTCTGGTGT+TGG 0.483362 3:+102712201 MsG0380017967.01.T01:CDS
GCAGATGCACCTCTTACATA+TGG 0.485700 3:-102712823 None:intergenic
TTGTCGCTTAGTTCCAGATC+AGG 0.488104 3:-102717718 None:intergenic
GCTGCAATTACCGGGATCTC+TGG 0.488390 3:+102711167 MsG0380017967.01.T01:five_prime_UTR
GGTAATATTTGAGCGGCTTG+TGG 0.494892 3:-102716843 None:intergenic
ACTTACACGACGGTCAACTT+TGG 0.499801 3:-102711338 None:intergenic
CTTATTTGGCAAAGATCCAA+TGG 0.502030 3:+102716533 MsG0380017967.01.T01:CDS
CTTGGCAGTAAGACGCCTAA+AGG 0.502523 3:-102712845 None:intergenic
TTGCGTGATCTTTCTAGGAC+AGG 0.503122 3:+102716720 MsG0380017967.01.T01:CDS
AGAGTTGTCATAAAGTCATC+AGG 0.504163 3:+102717650 MsG0380017967.01.T01:three_prime_UTR
CAAATAAGATGCAGAAGTCT+TGG 0.505500 3:-102716518 None:intergenic
GAGCACCTTAAGAGTGGTAG+TGG 0.506326 3:-102711531 None:intergenic
ATTGAGCGATTGGACCTTCA+CGG 0.508824 3:-102712439 None:intergenic
GTCATAAAGTCATCAGGACT+TGG 0.510327 3:+102717656 MsG0380017967.01.T01:three_prime_UTR
AGTTGATTACCTCTTCCCAT+TGG 0.512116 3:-102716549 None:intergenic
AATAGAGTCCTACACAAAGC+TGG 0.512238 3:+102712482 MsG0380017967.01.T01:CDS
AGAATAAGTTGCCAAGGAAG+AGG 0.516063 3:-102712259 None:intergenic
TGCACCTCTTACATATGGCC+TGG 0.517740 3:-102712818 None:intergenic
CCTTTGTCAATTAACAAAGC+GGG 0.522626 3:+102717744 MsG0380017967.01.T01:three_prime_UTR
TTGAGCGATTGGACCTTCAC+GGG 0.522891 3:-102712438 None:intergenic
TAGGACTCTATTCTTGCCTC+AGG 0.522970 3:-102712471 None:intergenic
CCCGCTTTGTTAATTGACAA+AGG 0.523075 3:-102717744 None:intergenic
GAGGACCTGGGAGGATAGAA+TGG 0.523253 3:-102711299 None:intergenic
CAAAATGGATAACAATTGGC+AGG 0.524969 3:-102712572 None:intergenic
ATGAGCTCTTGGTGGCAGCT+TGG 0.525565 3:-102712863 None:intergenic
GAATAAGTTGCCAAGGAAGA+GGG 0.531898 3:-102712258 None:intergenic
TTCACAGGAAATGGAACAGA+TGG 0.535738 3:-102713567 None:intergenic
TAGTAAACAGAATGAGCTCT+TGG 0.535990 3:-102712874 None:intergenic
CTTTCAGGTTGTCTTGCCAG+AGG 0.536714 3:+102713527 MsG0380017967.01.T01:intron
ACAATTGGCAGGTATGAGAA+TGG 0.537574 3:-102712561 None:intergenic
TTTCAGGTTGTCTTGCCAGA+GGG 0.540711 3:+102713528 MsG0380017967.01.T01:intron
AACTCTTTAGCAACGGCGAA+GGG 0.542494 3:-102712606 None:intergenic
TGATCTGTACATTGCCCCAA+TGG 0.542650 3:-102712650 None:intergenic
TGAAAATGCTCATTATGCTC+AGG 0.547728 3:-102713766 None:intergenic
TGTTATGAGAAGAAGTTAGG+AGG 0.549117 3:+102717049 MsG0380017967.01.T01:CDS
CAGGCCAGGCCATATGTAAG+AGG 0.549205 3:+102712814 MsG0380017967.01.T01:CDS
CACGACGGTCAACTTTGGTA+AGG 0.549384 3:-102711333 None:intergenic
CTAGGACAGGTGATATTCAA+GGG 0.554420 3:+102716733 MsG0380017967.01.T01:CDS
CTTCGCCGTTGCTAAAGAGT+TGG 0.554612 3:+102712608 MsG0380017967.01.T01:CDS
CAACCGTCTTTCTATGCTCA+GGG 0.556453 3:+102716417 MsG0380017967.01.T01:CDS
TTACCTAAAGGCCTTGGGAA+GGG 0.556651 3:+102712288 MsG0380017967.01.T01:CDS
GCAAATCTGCTGCAATTACC+GGG 0.557395 3:+102711159 MsG0380017967.01.T01:five_prime_UTR
TCAAACTTTCGCCCTTCCCA+AGG 0.557699 3:-102712299 None:intergenic
GTCACCCCACAAACTAGAAG+TGG 0.557838 3:-102712920 None:intergenic
TTATTTGGCAAAGATCCAAT+GGG 0.565258 3:+102716534 MsG0380017967.01.T01:CDS
CTTTACATGGTTATCAGGAA+AGG 0.566975 3:-102712133 None:intergenic
AGCAACACTTAACGAAGGAA+AGG 0.568080 3:+102712173 MsG0380017967.01.T01:CDS
TGTATGCTAAGTGCTTTACA+TGG 0.568391 3:-102712146 None:intergenic
ATTTCCACTTCTAGTTTGTG+GGG 0.568670 3:+102712916 MsG0380017967.01.T01:CDS
GGCAAAGATCCAATGGGAAG+AGG 0.571287 3:+102716540 MsG0380017967.01.T01:CDS
AAAACAGGCACCACTTGTGT+TGG 0.573074 3:+102717618 MsG0380017967.01.T01:three_prime_UTR
TTAGGGCGGACAACTTCATA+GGG 0.576553 3:-102712228 None:intergenic
GCAGACTTGACTATCAGGCC+AGG 0.579305 3:+102712800 MsG0380017967.01.T01:intron
GCAACTGAGTAACAAATCTA+CGG 0.579931 3:+102717592 MsG0380017967.01.T01:three_prime_UTR
GCAACACTTAACGAAGGAAA+GGG 0.580045 3:+102712174 MsG0380017967.01.T01:CDS
GAAGGGCGAAAGTTTGACGT+TGG 0.580960 3:+102712305 MsG0380017967.01.T01:CDS
GTGTCGCAGGTAGAGAATGC+AGG 0.581081 3:+102712081 MsG0380017967.01.T01:intron
TCTTTCTCCTTATCCCGTGA+AGG 0.581200 3:+102712425 MsG0380017967.01.T01:CDS
TTTACCTAAAGGCCTTGGGA+AGG 0.581516 3:+102712287 MsG0380017967.01.T01:CDS
CAATCACCAAATCATTAATG+GGG 0.584647 3:-102713174 None:intergenic
GACCTTGGGTAATATTTGAG+CGG 0.585756 3:-102716850 None:intergenic
AGTTACAGAATAAGTTGCCA+AGG 0.586321 3:-102712265 None:intergenic
TAAACAGAATGAGCTCTTGG+TGG 0.587661 3:-102712871 None:intergenic
CCAAACAAGAAGTCCTGAAG+TGG 0.588215 3:-102713112 None:intergenic
ATTTACCATTCTATCCTCCC+AGG 0.591306 3:+102711294 MsG0380017967.01.T01:CDS
TCTCACTGAACCAGAGATCC+CGG 0.591331 3:-102711177 None:intergenic
AACTTTGAGCACCTTAAGAG+TGG 0.594308 3:-102711537 None:intergenic
CCGTTGCTAAAGAGTTGGTG+AGG 0.595956 3:+102712613 MsG0380017967.01.T01:CDS
GGTTGCTAGCACCATTATTG+GGG 0.601415 3:+102717686 MsG0380017967.01.T01:three_prime_UTR
CAACTCTTTAGCAACGGCGA+AGG 0.602379 3:-102712607 None:intergenic
AACTTTGGTAAGGATGAGAT+CGG 0.602673 3:-102711323 None:intergenic
CATGGCGGTGCTCAGAGCAA+AGG 0.603405 3:+102712693 MsG0380017967.01.T01:CDS
GATGAGATCGGAGAGGACCT+GGG 0.604322 3:-102711311 None:intergenic
AGCTCATTCTGTTTACTACA+GGG 0.610364 3:+102712879 MsG0380017967.01.T01:CDS
GTCTGCATGCATGTAGACAA+TGG 0.610818 3:-102716485 None:intergenic
AACATTCGAACAAGAAACAA+AGG 0.611122 3:+102711115 None:intergenic
GATTGACACTCTTGTTGTGA+AGG 0.615337 3:+102713192 MsG0380017967.01.T01:CDS
GGTGGAGGAAGTAATTGCTA+AGG 0.617368 3:+102716976 MsG0380017967.01.T01:intron
GATCTGTACATTGCCCCAAT+GGG 0.625357 3:-102712649 None:intergenic
ATTTCATGATGACGATGATG+AGG 0.626481 3:+102711242 MsG0380017967.01.T01:exon
ATAGGTTCTAAATAATATGG+TGG 0.627895 3:+102717844 MsG0380017967.01.T01:three_prime_UTR
TCCTTTGTCAATTAACAAAG+CGG 0.628111 3:+102717743 MsG0380017967.01.T01:three_prime_UTR
AAGTGGCAACCCATATCCAA+TGG 0.630677 3:-102713095 None:intergenic
TTCACATTAACCAACACAAG+TGG 0.630710 3:-102717628 None:intergenic
GGGAGATTGAGATATCCCAT+TGG 0.633387 3:+102712634 MsG0380017967.01.T01:CDS
AGCCGCTCAAATATTACCCA+AGG 0.639940 3:+102716848 MsG0380017967.01.T01:CDS
CGTTGCTAAAGAGTTGGTGA+GGG 0.643300 3:+102712614 MsG0380017967.01.T01:CDS
ACTTAACGAAGGAAAGGGAA+AGG 0.652066 3:+102712179 MsG0380017967.01.T01:CDS
TCCTGTGAAAGAAAGACATG+AGG 0.667785 3:+102713581 MsG0380017967.01.T01:CDS
GCTCCCTGAGCATAGAAAGA+CGG 0.670119 3:-102716420 None:intergenic
GCTCAATGTTAAATTACCTG+AGG 0.670175 3:+102712455 MsG0380017967.01.T01:CDS
AATCACCAAATCATTAATGG+GGG 0.672170 3:-102713173 None:intergenic
CCTCACCAACTCTTTAGCAA+CGG 0.676013 3:-102712613 None:intergenic
CCTTAAGAGTGGTAGTGGTG+CGG 0.677361 3:-102711526 None:intergenic
ATTGGCAGGTATGAGAATGG+AGG 0.680768 3:-102712558 None:intergenic
AAGAGGGAATATCTTTAGGG+CGG 0.682262 3:-102712242 None:intergenic
ATGTCAGCAACACTTAACGA+AGG 0.697211 3:+102712168 MsG0380017967.01.T01:CDS
AATTTCGTCCAATAAAAGCG+TGG 0.703661 3:+102717877 MsG0380017967.01.T01:three_prime_UTR
CTCGTTGAAAGAGCTCACAA+AGG 0.716021 3:+102716785 MsG0380017967.01.T01:CDS
CATTATAATCTTGTTCATGG+CGG 0.724346 3:+102712678 MsG0380017967.01.T01:CDS
CAGAACTTGAGATCGAACCT+CGG 0.724721 3:+102713038 MsG0380017967.01.T01:CDS
GAGATTGAGATATCCCATTG+GGG 0.726808 3:+102712636 MsG0380017967.01.T01:CDS
TGGTAAGGATGAGATCGGAG+AGG 0.732813 3:-102711318 None:intergenic
GAGATCGGAGAGGACCTGGG+AGG 0.742940 3:-102711308 None:intergenic
TGCATGCATGTAGACAATGG+AGG 0.747749 3:-102716482 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAATTCATTTTATATTGT+TGG - Chr3:102713851-102713870 None:intergenic 10.0%
!!! AAATTATTTTCCATTTTTTA+TGG - Chr3:102715029-102715048 None:intergenic 10.0%
!!! TTATTTTATTTTTGTTTTTC+AGG + Chr3:102716955-102716974 MsG0380017967.01.T01:intron 10.0%
!!! TTTTTTTTTTTTTTTTGTGT+GGG + Chr3:102711575-102711594 MsG0380017967.01.T01:intron 10.0%
!!! TTTTTTTTTTTTTTTTTGTG+TGG + Chr3:102711574-102711593 MsG0380017967.01.T01:intron 10.0%
!! AAGAATAATAAATGTTGTAT+TGG + Chr3:102714090-102714109 MsG0380017967.01.T01:intron 15.0%
!!! AAAGTTAAATTACAAAGTTT+TGG - Chr3:102711625-102711644 None:intergenic 15.0%
!!! AAATAATTTGAAATTTTTGC+TGG + Chr3:102715040-102715059 MsG0380017967.01.T01:intron 15.0%
!!! ACAATTAGGTTATTTTATAT+CGG - Chr3:102716181-102716200 None:intergenic 15.0%
!!! ATATGATATTTGAAGTATTT+TGG - Chr3:102714644-102714663 None:intergenic 15.0%
!!! CAAACACTATATTTTATTTT+TGG + Chr3:102718001-102718020 MsG0380017967.01.T01:three_prime_UTR 15.0%
!!! CAAGATACTTTTTTTTTTTT+TGG + Chr3:102715356-102715375 MsG0380017967.01.T01:intron 15.0%
!!! TTTTATTGAGTATAATCAAT+GGG + Chr3:102717806-102717825 MsG0380017967.01.T01:three_prime_UTR 15.0%
!!! TTTTTTTTGTACAAACAATT+AGG - Chr3:102716195-102716214 None:intergenic 15.0%
!! AAGAAAGTAAAATTATGTGT+TGG - Chr3:102713240-102713259 None:intergenic 20.0%
!! AGAATTGAAAAATCTTAGAT+CGG - Chr3:102711406-102711425 None:intergenic 20.0%
!! AGCTTGAAAATAGTTTATAA+TGG + Chr3:102714341-102714360 MsG0380017967.01.T01:intron 20.0%
!! CAAAACTATTGAATACAAAA+TGG + Chr3:102714896-102714915 MsG0380017967.01.T01:intron 20.0%
!! CATATATATACACTAGAATA+AGG + Chr3:102717342-102717361 MsG0380017967.01.T01:intron 20.0%
!! CCACTAACTATAATTAATAA+GGG - Chr3:102714023-102714042 None:intergenic 20.0%
!! GATTGAAATGCAATAAATAA+GGG + Chr3:102714054-102714073 MsG0380017967.01.T01:intron 20.0%
!! TCCACTAACTATAATTAATA+AGG - Chr3:102714024-102714043 None:intergenic 20.0%
!! TCTTAAAAATAAGATGTTTG+TGG - Chr3:102713887-102713906 None:intergenic 20.0%
!! TGATTGAAATGCAATAAATA+AGG + Chr3:102714053-102714072 MsG0380017967.01.T01:intron 20.0%
!! TTGTAACATTCCAATTAAAT+TGG - Chr3:102715748-102715767 None:intergenic 20.0%
!!! AAAAAACCCTTTTTTTACAT+GGG - Chr3:102715850-102715869 None:intergenic 20.0%
!!! AATAAATAAGGGTATGTTAA+TGG + Chr3:102714065-102714084 MsG0380017967.01.T01:intron 20.0%
!!! AATTCATTTTATATTGTTGG+TGG - Chr3:102713848-102713867 None:intergenic 20.0%
!!! ACTGGTTTTATTATTGAATT+GGG + Chr3:102714240-102714259 MsG0380017967.01.T01:intron 20.0%
!!! ATTTGATTACTTTTTGTACA+GGG + Chr3:102716331-102716350 MsG0380017967.01.T01:intron 20.0%
!!! CAATTAGGTTATTTTATATC+GGG - Chr3:102716180-102716199 None:intergenic 20.0%
!!! CTTTTAAAATGTGAACAATT+AGG - Chr3:102716221-102716240 None:intergenic 20.0%
!!! CTTTTATTGAGTATAATCAA+TGG + Chr3:102717805-102717824 MsG0380017967.01.T01:three_prime_UTR 20.0%
!!! GAAATAGGTTCTAAATAATA+TGG + Chr3:102717841-102717860 MsG0380017967.01.T01:three_prime_UTR 20.0%
!!! GTTTGATTTTGATTGAATTA+AGG - Chr3:102714726-102714745 None:intergenic 20.0%
!!! TACTGGTTTTATTATTGAAT+TGG + Chr3:102714239-102714258 MsG0380017967.01.T01:intron 20.0%
!!! TGAACTTTAGTTTAAAAACT+TGG + Chr3:102711877-102711896 MsG0380017967.01.T01:intron 20.0%
!!! TTTAGTTCAGAAATTTTTAG+CGG + Chr3:102717228-102717247 MsG0380017967.01.T01:intron 20.0%
!!! TTTTATTTTTGTTTTTCAGG+TGG + Chr3:102716958-102716977 MsG0380017967.01.T01:intron 20.0%
! AAACATAACTCCAAATTCTA+AGG + Chr3:102715579-102715598 MsG0380017967.01.T01:intron 25.0%
! AACATAACTCCAAATTCTAA+GGG + Chr3:102715580-102715599 MsG0380017967.01.T01:intron 25.0%
! AAGTAAAACAAGGTCAAAAT+GGG - Chr3:102717206-102717225 None:intergenic 25.0%
! ACAAGAGATTTATGATCTTA+TGG + Chr3:102717126-102717145 MsG0380017967.01.T01:CDS 25.0%
! ACATAGATATCTATCATCTA+TGG - Chr3:102713634-102713653 None:intergenic 25.0%
! ACATGATAAAATACAATGAC+AGG + Chr3:102711812-102711831 MsG0380017967.01.T01:intron 25.0%
! ACATTGCATTATTATATGCA+GGG - Chr3:102715453-102715472 None:intergenic 25.0%
! CATGATAAAATACAATGACA+GGG + Chr3:102711813-102711832 MsG0380017967.01.T01:intron 25.0%
! CCAATGTAAAAAATCTAATC+TGG + Chr3:102714407-102714426 MsG0380017967.01.T01:intron 25.0%
! CCCTTATTAATTATAGTTAG+TGG + Chr3:102714020-102714039 MsG0380017967.01.T01:intron 25.0%
! GAACTAAATCAAGTAAAACA+AGG - Chr3:102717216-102717235 None:intergenic 25.0%
! GTAAGATACTAGATTGAATT+GGG + Chr3:102715929-102715948 MsG0380017967.01.T01:intron 25.0%
! TAATTAGTATTTATCGATGC+TGG + Chr3:102711425-102711444 MsG0380017967.01.T01:intron 25.0%
! TATGGAACTATAAATCAAGA+GGG - Chr3:102716934-102716953 None:intergenic 25.0%
! TATTCTGTAACTTTACCTAA+AGG + Chr3:102712276-102712295 MsG0380017967.01.T01:CDS 25.0%
! TCAATCACCAAATCATTAAT+GGG - Chr3:102713178-102713197 None:intergenic 25.0%
! TCTTTACTTGCAAATGATTA+TGG + Chr3:102716588-102716607 MsG0380017967.01.T01:intron 25.0%
! TGATACATGATTCAAAAAAG+TGG - Chr3:102715254-102715273 None:intergenic 25.0%
! TTATGGAACTATAAATCAAG+AGG - Chr3:102716935-102716954 None:intergenic 25.0%
! TTCTCAAAATGGATAACAAT+TGG - Chr3:102712579-102712598 None:intergenic 25.0%
! TTGTAACCTACCATTTAATT+TGG - Chr3:102714874-102714893 None:intergenic 25.0%
!! AAGTCTTCATTTCATCTTTT+AGG + Chr3:102711357-102711376 MsG0380017967.01.T01:intron 25.0%
!! AGTCTTCATTTCATCTTTTA+GGG + Chr3:102711358-102711377 MsG0380017967.01.T01:intron 25.0%
!! CTCTTTTCATTATGAAACTT+AGG - Chr3:102714317-102714336 None:intergenic 25.0%
!! GCTCTTTATAAACTATTTTC+AGG - Chr3:102716112-102716131 None:intergenic 25.0%
!! GTTGTATTGGTATTGTAAAA+GGG + Chr3:102714103-102714122 MsG0380017967.01.T01:intron 25.0%
!! TGTCATTGTATTTTATCATG+TGG - Chr3:102711813-102711832 None:intergenic 25.0%
!! TGTTGTATTGGTATTGTAAA+AGG + Chr3:102714102-102714121 MsG0380017967.01.T01:intron 25.0%
!! TTTGCAGTTTTCTTTTCTAT+TGG + Chr3:102714285-102714304 MsG0380017967.01.T01:intron 25.0%
!!! AGCAAAGTTTTTAAGAAATG+AGG - Chr3:102717420-102717439 None:intergenic 25.0%
!!! ATAGGTTCTAAATAATATGG+TGG + Chr3:102717844-102717863 MsG0380017967.01.T01:three_prime_UTR 25.0%
!!! CAAAGTTTTTAAGAAATGAG+GGG - Chr3:102717418-102717437 None:intergenic 25.0%
!!! CCAGATTAGATTTTTTACAT+TGG - Chr3:102714410-102714429 None:intergenic 25.0%
!!! GAAAAAACCCTTTTTTTACA+TGG - Chr3:102715851-102715870 None:intergenic 25.0%
!!! GATTTGATTACTTTTTGTAC+AGG + Chr3:102716330-102716349 MsG0380017967.01.T01:intron 25.0%
!!! GCAAAGTTTTTAAGAAATGA+GGG - Chr3:102717419-102717438 None:intergenic 25.0%
!!! TATTACTGTTGCATCTTTTT+TGG + Chr3:102713791-102713810 MsG0380017967.01.T01:intron 25.0%
!!! TCATTATTTTGTTGCAAACT+TGG + Chr3:102713268-102713287 MsG0380017967.01.T01:intron 25.0%
!!! TTTACCTGTATATTTTTCAG+AGG + Chr3:102713339-102713358 MsG0380017967.01.T01:intron 25.0%
!!! TTTTTTTTTTTTGTGTGGGT+GGG + Chr3:102711579-102711598 MsG0380017967.01.T01:intron 25.0%
!!! TTTTTTTTTTTTTGTGTGGG+TGG + Chr3:102711578-102711597 MsG0380017967.01.T01:intron 25.0%
AAAACCAGTACATGAAATTC+AGG - Chr3:102714229-102714248 None:intergenic 30.0%
AAGCCAGAAATCAACATTAA+CGG - Chr3:102716445-102716464 None:intergenic 30.0%
AATCACCAAATCATTAATGG+GGG - Chr3:102713176-102713195 None:intergenic 30.0%
AATTCAGAATCACAGAAACA+AGG - Chr3:102712735-102712754 None:intergenic 30.0%
ACCTTATAAGGTGAATAAGT+GGG + Chr3:102715404-102715423 MsG0380017967.01.T01:intron 30.0%
AGATATCTATCATCTATGGT+TGG - Chr3:102713630-102713649 None:intergenic 30.0%
AGATCAATCTGCAAACAATA+GGG - Chr3:102711491-102711510 None:intergenic 30.0%
ATACTCGTGTAAAACTCAAA+AGG - Chr3:102713941-102713960 None:intergenic 30.0%
ATATCCTGAATTTCATGTAC+TGG + Chr3:102714222-102714241 MsG0380017967.01.T01:intron 30.0%
ATCTAACCTTCATACTTAGA+TGG - Chr3:102716273-102716292 None:intergenic 30.0%
ATCTATGTCATTCCATTGTT+TGG + Chr3:102713646-102713665 MsG0380017967.01.T01:intron 30.0%
CAAAACAGCTCCAAATTAAA+TGG + Chr3:102714861-102714880 MsG0380017967.01.T01:intron 30.0%
CAAGTAAAACAAGGTCAAAA+TGG - Chr3:102717207-102717226 None:intergenic 30.0%
CAATCACCAAATCATTAATG+GGG - Chr3:102713177-102713196 None:intergenic 30.0%
CATTATAATCTTGTTCATGG+CGG + Chr3:102712678-102712697 MsG0380017967.01.T01:CDS 30.0%
CATTGCATTATTATATGCAG+GGG - Chr3:102715452-102715471 None:intergenic 30.0%
CGTAAGATACTAGATTGAAT+TGG + Chr3:102715928-102715947 MsG0380017967.01.T01:intron 30.0%
CTGGAAAATACAAAACTTCA+GGG + Chr3:102712501-102712520 MsG0380017967.01.T01:CDS 30.0%
CTTTGTCTGCAACAATTATA+TGG - Chr3:102713686-102713705 None:intergenic 30.0%
GACATTGCATTATTATATGC+AGG - Chr3:102715454-102715473 None:intergenic 30.0%
GAGCATTATAATCTTGTTCA+TGG + Chr3:102712675-102712694 MsG0380017967.01.T01:CDS 30.0%
GATTGTTATGAGAAGAAGTT+AGG + Chr3:102717046-102717065 MsG0380017967.01.T01:CDS 30.0%
GCATCAAAGGAAATAAGATA+AGG - Chr3:102712025-102712044 None:intergenic 30.0%
GGGAATAGTTCCAATTTAAT+TGG + Chr3:102715735-102715754 MsG0380017967.01.T01:intron 30.0%
GTAATTTAACATTGAGCGAT+TGG - Chr3:102712452-102712471 None:intergenic 30.0%
GTCAATCACCAAATCATTAA+TGG - Chr3:102713179-102713198 None:intergenic 30.0%
GTCATTGTAGTATATTGTGT+AGG + Chr3:102713470-102713489 MsG0380017967.01.T01:intron 30.0%
GTTGACCCTATAATATTTGA+CGG + Chr3:102715792-102715811 MsG0380017967.01.T01:intron 30.0%
TACTCGTGTAAAACTCAAAA+GGG - Chr3:102713940-102713959 None:intergenic 30.0%
TAGATTGAATTGGGATACAT+GGG + Chr3:102715938-102715957 MsG0380017967.01.T01:intron 30.0%
TCCTTTGTCAATTAACAAAG+CGG + Chr3:102717743-102717762 MsG0380017967.01.T01:three_prime_UTR 30.0%
TCTAACCTTCATACTTAGAT+GGG - Chr3:102716272-102716291 None:intergenic 30.0%
TCTATGTCATTCCATTGTTT+GGG + Chr3:102713647-102713666 MsG0380017967.01.T01:intron 30.0%
TGAAAGTTGAAAATAAGCCT+AGG - Chr3:102714504-102714523 None:intergenic 30.0%
TGGAAATGGTTGCAATATAT+GGG - Chr3:102712349-102712368 None:intergenic 30.0%
TTATAATAGACCTGCAATAC+AGG - Chr3:102716394-102716413 None:intergenic 30.0%
TTATTTGGCAAAGATCCAAT+GGG + Chr3:102716534-102716553 MsG0380017967.01.T01:CDS 30.0%
TTCAAATGTCACAGTATTGT+AGG + Chr3:102715097-102715116 MsG0380017967.01.T01:intron 30.0%
TTGACCCTATAATATTTGAC+GGG + Chr3:102715793-102715812 MsG0380017967.01.T01:intron 30.0%
TTGTAACCAACCAGTTAATT+TGG - Chr3:102714839-102714858 None:intergenic 30.0%
! AATATTACCCAAGGTCATTT+TGG + Chr3:102716857-102716876 MsG0380017967.01.T01:intron 30.0%
! AGTTCCTCTGAAAAATATAC+AGG - Chr3:102713346-102713365 None:intergenic 30.0%
! ATCAAGAGGGAAATTTTATG+TGG - Chr3:102716921-102716940 None:intergenic 30.0%
! GTATATTCCAACTCATTTTC+AGG + Chr3:102717533-102717552 MsG0380017967.01.T01:intron 30.0%
!! ACACTTTTGTTTCATCATTC+AGG + Chr3:102716623-102716642 MsG0380017967.01.T01:intron 30.0%
!! ACTCAATAAAAGAGTGCTAA+AGG - Chr3:102717797-102717816 None:intergenic 30.0%
!! ATATTTCCACTTCTAGTTTG+TGG + Chr3:102712914-102712933 MsG0380017967.01.T01:CDS 30.0%
!! TATTTCCACTTCTAGTTTGT+GGG + Chr3:102712915-102712934 MsG0380017967.01.T01:CDS 30.0%
!! TTTCAGGTAGGATTTTTCTT+TGG + Chr3:102717549-102717568 MsG0380017967.01.T01:intron 30.0%
!!! AAAAAAAGGGTTTTTTCTGC+CGG + Chr3:102715854-102715873 MsG0380017967.01.T01:intron 30.0%
!!! TATTTTTGTTTTTCAGGTGG+AGG + Chr3:102716961-102716980 MsG0380017967.01.T01:intron 30.0%
!!! TTTTTCCTGCTTTTTGTCAT+TGG + Chr3:102713442-102713461 MsG0380017967.01.T01:intron 30.0%
AAAAAGTGGTTGAACGATAC+AGG - Chr3:102715240-102715259 None:intergenic 35.0%
AAAGTAAATCGCAGCATCAA+AGG - Chr3:102712038-102712057 None:intergenic 35.0%
AACAACCAATGACAAAAAGC+AGG - Chr3:102713450-102713469 None:intergenic 35.0%
AACTTTGGTAAGGATGAGAT+CGG - Chr3:102711326-102711345 None:intergenic 35.0%
AAGGAAGAGGGAATATCTTT+AGG - Chr3:102712249-102712268 None:intergenic 35.0%
AAGTGCTTTACATGGTTATC+AGG - Chr3:102712141-102712160 None:intergenic 35.0%
AAGTTCTGTAGACAACAACA+TGG - Chr3:102711769-102711788 None:intergenic 35.0%
AATCCTACCTGAAAATGAGT+TGG - Chr3:102717543-102717562 None:intergenic 35.0%
AATGGAGGAAGATTCTCATA+TGG - Chr3:102712546-102712565 None:intergenic 35.0%
AATTTCGTCCAATAAAAGCG+TGG + Chr3:102717877-102717896 MsG0380017967.01.T01:three_prime_UTR 35.0%
ACAAATCTACGGACAAAAAC+AGG + Chr3:102717603-102717622 MsG0380017967.01.T01:three_prime_UTR 35.0%
ACAGCTCCAAATTAAATGGT+AGG + Chr3:102714865-102714884 MsG0380017967.01.T01:intron 35.0%
ACTCACCTTCTATTCCTTTA+CGG - Chr3:102714799-102714818 None:intergenic 35.0%
AGAGTTGTCATAAAGTCATC+AGG + Chr3:102717650-102717669 MsG0380017967.01.T01:three_prime_UTR 35.0%
AGCAACGACTAATGATACTA+TGG - Chr3:102716671-102716690 None:intergenic 35.0%
AGCTCATTCTGTTTACTACA+GGG + Chr3:102712879-102712898 MsG0380017967.01.T01:CDS 35.0%
AGGAAGAGGGAATATCTTTA+GGG - Chr3:102712248-102712267 None:intergenic 35.0%
AGGGCTGATTATTCTCAAAA+TGG - Chr3:102712590-102712609 None:intergenic 35.0%
AGTTACAGAATAAGTTGCCA+AGG - Chr3:102712268-102712287 None:intergenic 35.0%
ATACCGACCCATGTAAAAAA+AGG + Chr3:102715840-102715859 MsG0380017967.01.T01:intron 35.0%
ATACGATATGAAAACAGCCA+TGG - Chr3:102716016-102716035 None:intergenic 35.0%
ATAGCTCCAAATTAACTGGT+TGG + Chr3:102714830-102714849 MsG0380017967.01.T01:intron 35.0%
ATTTATTGGGATATGCATCG+TGG + Chr3:102715127-102715146 MsG0380017967.01.T01:intron 35.0%
ATTTCCCTCCTTACAAATTC+AGG - Chr3:102714199-102714218 None:intergenic 35.0%
CAAAATGGATAACAATTGGC+AGG - Chr3:102712575-102712594 None:intergenic 35.0%
CAAACTTGGAATGCAATCTT+TGG + Chr3:102713282-102713301 MsG0380017967.01.T01:intron 35.0%
CAAATAAGATGCAGAAGTCT+TGG - Chr3:102716521-102716540 None:intergenic 35.0%
CAAGACTTCTGCATCTTATT+TGG + Chr3:102716519-102716538 MsG0380017967.01.T01:CDS 35.0%
CACCTTATAAGGTGAATAAG+TGG + Chr3:102715403-102715422 MsG0380017967.01.T01:intron 35.0%
CAGATCAATCTGCAAACAAT+AGG - Chr3:102711492-102711511 None:intergenic 35.0%
CAGGACTGTTCCATAAAAAA+TGG + Chr3:102715016-102715035 MsG0380017967.01.T01:intron 35.0%
CAGGGATCTGAATTGAAATA+TGG + Chr3:102712519-102712538 MsG0380017967.01.T01:CDS 35.0%
CCTTATAAGGTGAATAAGTG+GGG + Chr3:102715405-102715424 MsG0380017967.01.T01:intron 35.0%
CCTTTGTCAATTAACAAAGC+GGG + Chr3:102717744-102717763 MsG0380017967.01.T01:three_prime_UTR 35.0%
CTAGATTGAATTGGGATACA+TGG + Chr3:102715937-102715956 MsG0380017967.01.T01:intron 35.0%
CTGGAAATGGTTGCAATATA+TGG - Chr3:102712350-102712369 None:intergenic 35.0%
CTTATTTGGCAAAGATCCAA+TGG + Chr3:102716533-102716552 MsG0380017967.01.T01:CDS 35.0%
CTTTACATGGTTATCAGGAA+AGG - Chr3:102712136-102712155 None:intergenic 35.0%
GAGCAATTACATTTAGCAAG+TGG - Chr3:102711994-102712013 None:intergenic 35.0%
GAGGAAGGGAAATTGAAAAT+CGG + Chr3:102717068-102717087 MsG0380017967.01.T01:CDS 35.0%
GCAACTGAGTAACAAATCTA+CGG + Chr3:102717592-102717611 MsG0380017967.01.T01:three_prime_UTR 35.0%
GCATATCCCAATAAATCTAG+TGG - Chr3:102715123-102715142 None:intergenic 35.0%
GCTCAATGTTAAATTACCTG+AGG + Chr3:102712455-102712474 MsG0380017967.01.T01:CDS 35.0%
GCTGGAAAATACAAAACTTC+AGG + Chr3:102712500-102712519 MsG0380017967.01.T01:CDS 35.0%
GGACTATAAAACCCAAACAA+TGG - Chr3:102713661-102713680 None:intergenic 35.0%
GGGAACCAAAAGAGATATTA+AGG - Chr3:102713156-102713175 None:intergenic 35.0%
GTCTGCAACAATTATATGGA+TGG - Chr3:102713682-102713701 None:intergenic 35.0%
GTGACCCGTCAAATATTATA+GGG - Chr3:102715800-102715819 None:intergenic 35.0%
GTGATCATGGTAGTCAAATT+GGG + Chr3:102714553-102714572 MsG0380017967.01.T01:intron 35.0%
GTTAGTGTCCTGAATTTGTA+AGG + Chr3:102714188-102714207 MsG0380017967.01.T01:intron 35.0%
GTTTACTACAGGGATGAAAT+CGG + Chr3:102712889-102712908 MsG0380017967.01.T01:CDS 35.0%
TAAAGATATTCCCTCTTCCT+TGG + Chr3:102712248-102712267 MsG0380017967.01.T01:CDS 35.0%
TAACTTTACCTAAAGGCCTT+GGG + Chr3:102712283-102712302 MsG0380017967.01.T01:CDS 35.0%
TACCGACCCATGTAAAAAAA+GGG + Chr3:102715841-102715860 MsG0380017967.01.T01:intron 35.0%
TACGATATGAAAACAGCCAT+GGG - Chr3:102716015-102716034 None:intergenic 35.0%
TAGTAAACAGAATGAGCTCT+TGG - Chr3:102712877-102712896 None:intergenic 35.0%
TGAAAATGCTCATTATGCTC+AGG - Chr3:102713769-102713788 None:intergenic 35.0%
TGAAATGAAGACTTACACGA+CGG - Chr3:102711351-102711370 None:intergenic 35.0%
TGACTTACTAATACATCTGC+CGG + Chr3:102713495-102713514 MsG0380017967.01.T01:intron 35.0%
TGCAAACAATAGGGAAACAA+TGG - Chr3:102711482-102711501 None:intergenic 35.0%
TGGCTAGAATTCACCTTATA+AGG + Chr3:102715392-102715411 MsG0380017967.01.T01:intron 35.0%
TGTATGCTAAGTGCTTTACA+TGG - Chr3:102712149-102712168 None:intergenic 35.0%
TGTCTTTCTTTCACAGGAAA+TGG - Chr3:102713579-102713598 None:intergenic 35.0%
TGTGACCCGTCAAATATTAT+AGG - Chr3:102715801-102715820 None:intergenic 35.0%
TGTGATCATGGTAGTCAAAT+TGG + Chr3:102714552-102714571 MsG0380017967.01.T01:intron 35.0%
TGTTATGAGAAGAAGTTAGG+AGG + Chr3:102717049-102717068 MsG0380017967.01.T01:CDS 35.0%
TTCACATTAACCAACACAAG+TGG - Chr3:102717631-102717650 None:intergenic 35.0%
TTCATACTTGTGCAAATGAG+AGG + Chr3:102711933-102711952 MsG0380017967.01.T01:intron 35.0%
TTTATTGGGATATGCATCGT+GGG + Chr3:102715128-102715147 MsG0380017967.01.T01:intron 35.0%
! ACTGTCTAGAAGTATGTTTC+TGG - Chr3:102717448-102717467 None:intergenic 35.0%
! ACTTCCTCTTTTTCTCTCTA+CGG - Chr3:102715677-102715696 None:intergenic 35.0%
! ATTTCATGATGACGATGATG+AGG + Chr3:102711242-102711261 MsG0380017967.01.T01:exon 35.0%
! CGCTTCCTTAATATCTCTTT+TGG + Chr3:102713148-102713167 MsG0380017967.01.T01:CDS 35.0%
! GAAATATCTTTTGAACCCTC+TGG - Chr3:102713546-102713565 None:intergenic 35.0%
! TGAGCATAATGAGCATTTTC+AGG + Chr3:102713768-102713787 MsG0380017967.01.T01:CDS 35.0%
! TTACTCAGTTGCTTTGTCAT+TGG - Chr3:102717584-102717603 None:intergenic 35.0%
! TTCAGAGGAACTAGAAGTAT+AGG + Chr3:102713354-102713373 MsG0380017967.01.T01:intron 35.0%
! TTTTCACACTTGGATATTGC+TGG + Chr3:102713706-102713725 MsG0380017967.01.T01:CDS 35.0%
!! ACTGCTTTTACCATTGGATA+TGG + Chr3:102713085-102713104 MsG0380017967.01.T01:CDS 35.0%
!! ATTTCCACTTCTAGTTTGTG+GGG + Chr3:102712916-102712935 MsG0380017967.01.T01:CDS 35.0%
!! CTGCTTTTACCATTGGATAT+GGG + Chr3:102713086-102713105 MsG0380017967.01.T01:CDS 35.0%
!! TGCGTAATTTTCTCTGGAAA+TGG - Chr3:102712363-102712382 None:intergenic 35.0%
!! TGGAAAACTGCTTTTACCAT+TGG + Chr3:102713079-102713098 MsG0380017967.01.T01:CDS 35.0%
!! TGGCTGTTTTCATATCGTAT+CGG + Chr3:102716016-102716035 MsG0380017967.01.T01:intron 35.0%
!! TGTATTTTCCAGCTTTGTGT+AGG - Chr3:102712493-102712512 None:intergenic 35.0%
!!! AACCCTTTTTTTACATGGGT+CGG - Chr3:102715846-102715865 None:intergenic 35.0%
!!! ATTCCAACTCATTTTCAGGT+AGG + Chr3:102717537-102717556 MsG0380017967.01.T01:intron 35.0%
!!! CATTTTATATTGTTGGTGGC+TGG - Chr3:102713844-102713863 None:intergenic 35.0%
!!! CATTTTTTATGGAACAGTCC+TGG - Chr3:102715018-102715037 None:intergenic 35.0%
!!! GGGTTCTACACTTTTGAAAT+AGG + Chr3:102717826-102717845 MsG0380017967.01.T01:three_prime_UTR 35.0%
!!! TACTGTTGCATCTTTTTTGG+AGG + Chr3:102713794-102713813 MsG0380017967.01.T01:intron 35.0%
!!! TGATTACTTTTTGTACAGGG+TGG + Chr3:102716334-102716353 MsG0380017967.01.T01:intron 35.0%
AAAATCGACGTGTAAGGTGA+GGG - Chr3:102716141-102716160 None:intergenic 40.0%
AACTTTGAGCACCTTAAGAG+TGG - Chr3:102711540-102711559 None:intergenic 40.0%
AAGCCATTCCAAAATGACCT+TGG - Chr3:102716868-102716887 None:intergenic 40.0%
AAGGGACACCTAATATGAGA+TGG - Chr3:102713922-102713941 None:intergenic 40.0%
AATAGAGTCCTACACAAAGC+TGG + Chr3:102712482-102712501 MsG0380017967.01.T01:CDS 40.0%
ACAATTGGCAGGTATGAGAA+TGG - Chr3:102712564-102712583 None:intergenic 40.0%
ACATGGGTCGGTATTAGAAA+CGG - Chr3:102715834-102715853 None:intergenic 40.0%
ACCTCATGTCTTTCTTTCAC+AGG - Chr3:102713585-102713604 None:intergenic 40.0%
ACTAGCTGGATTTGTAAGGA+TGG + Chr3:102714377-102714396 MsG0380017967.01.T01:intron 40.0%
ACTTAACGAAGGAAAGGGAA+AGG + Chr3:102712179-102712198 MsG0380017967.01.T01:CDS 40.0%
AGAATAAGTTGCCAAGGAAG+AGG - Chr3:102712262-102712281 None:intergenic 40.0%
AGACACGACAACTAGAGAAA+AGG + Chr3:102716299-102716318 MsG0380017967.01.T01:intron 40.0%
AGACCTACTAGTTGTGATCA+TGG + Chr3:102714540-102714559 MsG0380017967.01.T01:intron 40.0%
AGAGAGAAAAAGAGGAAGTG+TGG + Chr3:102715678-102715697 MsG0380017967.01.T01:intron 40.0%
AGATTTGCAGGAGAAGCTTA+TGG + Chr3:102717003-102717022 MsG0380017967.01.T01:CDS 40.0%
AGCAACACTTAACGAAGGAA+AGG + Chr3:102712173-102712192 MsG0380017967.01.T01:CDS 40.0%
AGCCATTCCAAAATGACCTT+GGG - Chr3:102716867-102716886 None:intergenic 40.0%
AGGTGGGATACTAACTATAC+TGG + Chr3:102715153-102715172 MsG0380017967.01.T01:intron 40.0%
AGTGTCCTGAATTTGTAAGG+AGG + Chr3:102714191-102714210 MsG0380017967.01.T01:intron 40.0%
AGTTGATTACCTCTTCCCAT+TGG - Chr3:102716552-102716571 None:intergenic 40.0%
ATACGTATCGTGGGATACAT+GGG + Chr3:102716040-102716059 MsG0380017967.01.T01:intron 40.0%
ATACTGGGTGTGATACTGAT+GGG + Chr3:102715169-102715188 MsG0380017967.01.T01:intron 40.0%
ATCACAGAAACAAGGTAACC+TGG - Chr3:102712727-102712746 None:intergenic 40.0%
ATCAGCCCATCTAAGTATGA+AGG + Chr3:102716264-102716283 MsG0380017967.01.T01:intron 40.0%
ATGAGAAGAAGTTAGGAGGA+AGG + Chr3:102717053-102717072 MsG0380017967.01.T01:CDS 40.0%
ATGTCAGCAACACTTAACGA+AGG + Chr3:102712168-102712187 MsG0380017967.01.T01:CDS 40.0%
ATTTACCATTCTATCCTCCC+AGG + Chr3:102711294-102711313 MsG0380017967.01.T01:CDS 40.0%
ATTTGAACAAAGGCTTACGG+AGG - Chr3:102711658-102711677 None:intergenic 40.0%
CAAAACCCTAGAACAGAAAG+CGG + Chr3:102715770-102715789 MsG0380017967.01.T01:intron 40.0%
CCCCACTTATTCACCTTATA+AGG - Chr3:102715408-102715427 None:intergenic 40.0%
CCTGCTATACATGGTCATTT+GGG + Chr3:102715966-102715985 MsG0380017967.01.T01:intron 40.0%
CCTTACAAAATCGACGTGTA+AGG - Chr3:102716147-102716166 None:intergenic 40.0%
CTACCATGATCACAACTAGT+AGG - Chr3:102714546-102714565 None:intergenic 40.0%
CTAGGACAGGTGATATTCAA+GGG + Chr3:102716733-102716752 MsG0380017967.01.T01:CDS 40.0%
CTCAAGCATGGTAGTCAAAT+CGG + Chr3:102715205-102715224 MsG0380017967.01.T01:intron 40.0%
CTCTCTGCTCATTCACTAAT+GGG - Chr3:102715611-102715630 None:intergenic 40.0%
GAAACAGATCGTGTATGTGT+TGG + Chr3:102714770-102714789 MsG0380017967.01.T01:intron 40.0%
GAAGACTGCAAAAATGTCAC+AGG - Chr3:102716822-102716841 None:intergenic 40.0%
GAATAAGTTGCCAAGGAAGA+GGG - Chr3:102712261-102712280 None:intergenic 40.0%
GAATTTCAGTTGCAGAAACC+AGG - Chr3:102715080-102715099 None:intergenic 40.0%
GACACCTAATATGAGATGGA+GGG - Chr3:102713918-102713937 None:intergenic 40.0%
GACACGACAACTAGAGAAAA+GGG + Chr3:102716300-102716319 MsG0380017967.01.T01:intron 40.0%
GACCTTGGGTAATATTTGAG+CGG - Chr3:102716853-102716872 None:intergenic 40.0%
GAGATTGAGATATCCCATTG+GGG + Chr3:102712636-102712655 MsG0380017967.01.T01:CDS 40.0%
GAGCTCATTCTGTTTACTAC+AGG + Chr3:102712878-102712897 MsG0380017967.01.T01:CDS 40.0%
GCAACACTTAACGAAGGAAA+GGG + Chr3:102712174-102712193 MsG0380017967.01.T01:CDS 40.0%
GCATTGAGAAAACTCAAGCA+TGG + Chr3:102715193-102715212 MsG0380017967.01.T01:intron 40.0%
GCCATTTGAACAAAGGCTTA+CGG - Chr3:102711661-102711680 None:intergenic 40.0%
GGAGATTGAGATATCCCATT+GGG + Chr3:102712635-102712654 MsG0380017967.01.T01:CDS 40.0%
GGGAAACAATGGTCAGAAAA+AGG - Chr3:102711471-102711490 None:intergenic 40.0%
GGGAATAGCTCCAAATTAAC+TGG + Chr3:102714826-102714845 MsG0380017967.01.T01:intron 40.0%
GGTGGGATACTAACTATACT+GGG + Chr3:102715154-102715173 MsG0380017967.01.T01:intron 40.0%
GGTTAAGTAGTTGCGAACAT+AGG + Chr3:102711834-102711853 MsG0380017967.01.T01:intron 40.0%
GGTTCAAGCAACTATTCATC+AGG + Chr3:102716644-102716663 MsG0380017967.01.T01:intron 40.0%
GTAAAGGAATAGAAGGTGAG+TGG + Chr3:102714798-102714817 MsG0380017967.01.T01:intron 40.0%
GTAACTTTACCTAAAGGCCT+TGG + Chr3:102712282-102712301 MsG0380017967.01.T01:CDS 40.0%
GTCATAAAGTCATCAGGACT+TGG + Chr3:102717656-102717675 MsG0380017967.01.T01:three_prime_UTR 40.0%
GTGTCCTGAATTTGTAAGGA+GGG + Chr3:102714192-102714211 MsG0380017967.01.T01:intron 40.0%
GTGTTTCACTTGCAGAAACT+GGG - Chr3:102715894-102715913 None:intergenic 40.0%
TAAACAGAATGAGCTCTTGG+TGG - Chr3:102712874-102712893 None:intergenic 40.0%
TAAGGTGAATTCTAGCCACT+AGG - Chr3:102715390-102715409 None:intergenic 40.0%
TACTCCCTCCATCTCATATT+AGG + Chr3:102713911-102713930 MsG0380017967.01.T01:intron 40.0%
TAGACCGTAGAGAGAAAAAG+AGG + Chr3:102715670-102715689 MsG0380017967.01.T01:intron 40.0%
TATACTGGGTGTGATACTGA+TGG + Chr3:102715168-102715187 MsG0380017967.01.T01:intron 40.0%
TATTATCTTCCTTGTGTCGC+AGG + Chr3:102712068-102712087 MsG0380017967.01.T01:intron 40.0%
TCAAGCATGGTAGTCAAATC+GGG + Chr3:102715206-102715225 MsG0380017967.01.T01:intron 40.0%
TCCGTAAGCCTTTGTTCAAA+TGG + Chr3:102711657-102711676 MsG0380017967.01.T01:intron 40.0%
TCCTGTGAAAGAAAGACATG+AGG + Chr3:102713581-102713600 MsG0380017967.01.T01:CDS 40.0%
TCTCTCTGCTCATTCACTAA+TGG - Chr3:102715612-102715631 None:intergenic 40.0%
TGAGAAGAAGTTAGGAGGAA+GGG + Chr3:102717054-102717073 MsG0380017967.01.T01:CDS 40.0%
TGCAAATCTGCTGCAATTAC+CGG + Chr3:102711158-102711177 MsG0380017967.01.T01:five_prime_UTR 40.0%
TGCTTTGTCATTGGATCGTT+AGG - Chr3:102717575-102717594 None:intergenic 40.0%
TGGATTTGTAAGGATGGTGT+AGG + Chr3:102714383-102714402 MsG0380017967.01.T01:intron 40.0%
TGGTTCCCCCATTAATGATT+TGG + Chr3:102713168-102713187 MsG0380017967.01.T01:CDS 40.0%
TTCACAGGAAATGGAACAGA+TGG - Chr3:102713570-102713589 None:intergenic 40.0%
TTTGTGGGGTGACTCAAAAA+AGG + Chr3:102712930-102712949 MsG0380017967.01.T01:CDS 40.0%
! AAGAGGGAATATCTTTAGGG+CGG - Chr3:102712245-102712264 None:intergenic 40.0%
! AATAGAAGGTGAGTGGCTTT+TGG + Chr3:102714805-102714824 MsG0380017967.01.T01:intron 40.0%
! ACAAGAACGTGTGCAACTTT+TGG + Chr3:102715714-102715733 MsG0380017967.01.T01:intron 40.0%
! AGAGCAAAGGAGAATTTTCC+AGG + Chr3:102712706-102712725 MsG0380017967.01.T01:CDS 40.0%
! AGGAACTAGAAGTATAGGAC+AGG + Chr3:102713359-102713378 MsG0380017967.01.T01:intron 40.0%
! ATAGAAGGTGAGTGGCTTTT+GGG + Chr3:102714806-102714825 MsG0380017967.01.T01:intron 40.0%
! CAAGAACGTGTGCAACTTTT+GGG + Chr3:102715715-102715734 MsG0380017967.01.T01:intron 40.0%
! CACAGTTGTCTGTGAGTTTT+AGG + Chr3:102711734-102711753 MsG0380017967.01.T01:intron 40.0%
! CCCGCTTTGTTAATTGACAA+AGG - Chr3:102717747-102717766 None:intergenic 40.0%
! GAGAGAAAAAGAGGAAGTGT+GGG + Chr3:102715679-102715698 MsG0380017967.01.T01:intron 40.0%
! GATTGACACTCTTGTTGTGA+AGG + Chr3:102713192-102713211 MsG0380017967.01.T01:CDS 40.0%
! GCAGACAAAGTTTTCACACT+TGG + Chr3:102713696-102713715 MsG0380017967.01.T01:intron 40.0%
! TCAGCTTGCGTAATTTTCTC+TGG - Chr3:102712369-102712388 None:intergenic 40.0%
! TCTAGGACAGGTGATATTCA+AGG + Chr3:102716732-102716751 MsG0380017967.01.T01:CDS 40.0%
! TTTTCCAGCCACCAAAAAGT+GGG - Chr3:102713066-102713085 None:intergenic 40.0%
!! CGAGCTATCAACTGATTTTC+TGG - Chr3:102716769-102716788 None:intergenic 40.0%
!! GAGCCGTTAATGTTGATTTC+TGG + Chr3:102716439-102716458 MsG0380017967.01.T01:CDS 40.0%
!! GGCTGTTTTCATATCGTATC+GGG + Chr3:102716017-102716036 MsG0380017967.01.T01:intron 40.0%
!! TACCCAAGGTCATTTTGGAA+TGG + Chr3:102716862-102716881 MsG0380017967.01.T01:intron 40.0%
!! TCATACTTAGATGGGCTGAT+GGG - Chr3:102716264-102716283 None:intergenic 40.0%
!! TTCATACTTAGATGGGCTGA+TGG - Chr3:102716265-102716284 None:intergenic 40.0%
!! TTTTTGGTCAAGTAGCCTAG+TGG + Chr3:102715372-102715391 MsG0380017967.01.T01:intron 40.0%
!!! ACACCTATTTTTGAGACGGA+GGG + Chr3:102714162-102714181 MsG0380017967.01.T01:intron 40.0%
!!! CCTTACACGTCGATTTTGTA+AGG + Chr3:102716144-102716163 MsG0380017967.01.T01:intron 40.0%
!!! GACGACACCTATTTTTGAGA+CGG + Chr3:102714158-102714177 MsG0380017967.01.T01:intron 40.0%
!!! TAGCGATACTTGTTTTGCGT+GGG + Chr3:102717271-102717290 MsG0380017967.01.T01:intron 40.0%
!!! TTAGCGATACTTGTTTTGCG+TGG + Chr3:102717270-102717289 MsG0380017967.01.T01:intron 40.0%
AAAACAGGCACCACTTGTGT+TGG + Chr3:102717618-102717637 MsG0380017967.01.T01:three_prime_UTR 45.0%
AAATCCAGCTAGTGCGTTGA+GGG - Chr3:102714370-102714389 None:intergenic 45.0%
AAATCGACGTGTAAGGTGAG+GGG - Chr3:102716140-102716159 None:intergenic 45.0%
AACCTGAAAGTTGCAAGCAC+CGG - Chr3:102713517-102713536 None:intergenic 45.0%
AACTCTTTAGCAACGGCGAA+GGG - Chr3:102712609-102712628 None:intergenic 45.0%
AAGAAAACCGTGGGTGTTTG+GGG + Chr3:102714958-102714977 MsG0380017967.01.T01:intron 45.0%
AAGCCTAGGCTAGTACTACT+GGG - Chr3:102714490-102714509 None:intergenic 45.0%
AAGTGGCAACCCATATCCAA+TGG - Chr3:102713098-102713117 None:intergenic 45.0%
ACAGACAACTGTGAAGTTCC+AGG - Chr3:102711727-102711746 None:intergenic 45.0%
ACGCACTAGCTGGATTTGTA+AGG + Chr3:102714373-102714392 MsG0380017967.01.T01:intron 45.0%
ACTCCCTCCGTCTCAAAAAT+AGG - Chr3:102714168-102714187 None:intergenic 45.0%
ACTTACACGACGGTCAACTT+TGG - Chr3:102711341-102711360 None:intergenic 45.0%
AGCCGCTCAAATATTACCCA+AGG + Chr3:102716848-102716867 MsG0380017967.01.T01:CDS 45.0%
AGTTGCGAACATAGGCTTAG+AGG + Chr3:102711842-102711861 MsG0380017967.01.T01:intron 45.0%
ATATGCATCGTGGGATAGGT+GGG + Chr3:102715137-102715156 MsG0380017967.01.T01:intron 45.0%
ATGGCAATGCCCATATTGCT+AGG + Chr3:102711676-102711695 MsG0380017967.01.T01:intron 45.0%
ATGTGTCCAGCCTAGCAATA+TGG - Chr3:102711689-102711708 None:intergenic 45.0%
ATTATTATATGCAGGGGCCG+GGG - Chr3:102715446-102715465 None:intergenic 45.0%
ATTGAGCGATTGGACCTTCA+CGG - Chr3:102712442-102712461 None:intergenic 45.0%
ATTGGCAGGTATGAGAATGG+AGG - Chr3:102712561-102712580 None:intergenic 45.0%
CAAAATCGACGTGTAAGGTG+AGG - Chr3:102716142-102716161 None:intergenic 45.0%
CAACCGTCTTTCTATGCTCA+GGG + Chr3:102716417-102716436 MsG0380017967.01.T01:CDS 45.0%
CAAGAAAACCGTGGGTGTTT+GGG + Chr3:102714957-102714976 MsG0380017967.01.T01:intron 45.0%
CAGAACTTGAGATCGAACCT+CGG + Chr3:102713038-102713057 MsG0380017967.01.T01:CDS 45.0%
CATCGTTGCGTGATCTTTCT+AGG + Chr3:102716715-102716734 MsG0380017967.01.T01:CDS 45.0%
CATGGGTCGGTATTAGAAAC+GGG - Chr3:102715833-102715852 None:intergenic 45.0%
CATTATTATATGCAGGGGCC+GGG - Chr3:102715447-102715466 None:intergenic 45.0%
CCAAACAAGAAGTCCTGAAG+TGG - Chr3:102713115-102713134 None:intergenic 45.0%
CCACTTCAGGACTTCTTGTT+TGG + Chr3:102713112-102713131 MsG0380017967.01.T01:CDS 45.0%
CCATGGGCAAATACGTATCA+GGG - Chr3:102715999-102716018 None:intergenic 45.0%
CCCAAATGACCATGTATAGC+AGG - Chr3:102715969-102715988 None:intergenic 45.0%
CCTCACCAACTCTTTAGCAA+CGG - Chr3:102712616-102712635 None:intergenic 45.0%
CGGTTGCTAGCACCATTATT+GGG + Chr3:102717685-102717704 MsG0380017967.01.T01:three_prime_UTR 45.0%
CGTGTTTCACTTGCAGAAAC+TGG - Chr3:102715895-102715914 None:intergenic 45.0%
CTCGTTGAAAGAGCTCACAA+AGG + Chr3:102716785-102716804 MsG0380017967.01.T01:CDS 45.0%
GATACGTATCGTGGGATACA+TGG + Chr3:102716039-102716058 MsG0380017967.01.T01:intron 45.0%
GATCTGTACATTGCCCCAAT+GGG - Chr3:102712652-102712671 None:intergenic 45.0%
GCAAATCTGCTGCAATTACC+GGG + Chr3:102711159-102711178 MsG0380017967.01.T01:five_prime_UTR 45.0%
GCAGATGCACCTCTTACATA+TGG - Chr3:102712826-102712845 None:intergenic 45.0%
GCATTATTATATGCAGGGGC+CGG - Chr3:102715448-102715467 None:intergenic 45.0%
GCCTGCTATACATGGTCATT+TGG + Chr3:102715965-102715984 MsG0380017967.01.T01:intron 45.0%
GCGAAATCATCTTCTGGTGT+TGG + Chr3:102712201-102712220 MsG0380017967.01.T01:CDS 45.0%
GGAAAGGCGAAATCATCTTC+TGG + Chr3:102712195-102712214 MsG0380017967.01.T01:CDS 45.0%
GGAAGCCGTAAAGGAATAGA+AGG + Chr3:102714791-102714810 MsG0380017967.01.T01:intron 45.0%
GGACACCTAATATGAGATGG+AGG - Chr3:102713919-102713938 None:intergenic 45.0%
GGCAGAAATCACCCCAATAA+TGG - Chr3:102717700-102717719 None:intergenic 45.0%
GGGAGATTGAGATATCCCAT+TGG + Chr3:102712634-102712653 MsG0380017967.01.T01:CDS 45.0%
GGTAATATTTGAGCGGCTTG+TGG - Chr3:102716846-102716865 None:intergenic 45.0%
GGTGGAGGAAGTAATTGCTA+AGG + Chr3:102716976-102716995 MsG0380017967.01.T01:intron 45.0%
GGTTGCTAGCACCATTATTG+GGG + Chr3:102717686-102717705 MsG0380017967.01.T01:three_prime_UTR 45.0%
GTATGTGTTGGAAGCCGTAA+AGG + Chr3:102714782-102714801 MsG0380017967.01.T01:intron 45.0%
GTCAACCGCTTTCTGTTCTA+GGG - Chr3:102715778-102715797 None:intergenic 45.0%
GTCTGCATGCATGTAGACAA+TGG - Chr3:102716488-102716507 None:intergenic 45.0%
TAAGCCTAGGCTAGTACTAC+TGG - Chr3:102714491-102714510 None:intergenic 45.0%
TACGTATCGTGGGATACATG+GGG + Chr3:102716041-102716060 MsG0380017967.01.T01:intron 45.0%
TAGGACTCTATTCTTGCCTC+AGG - Chr3:102712474-102712493 None:intergenic 45.0%
TAGGCTAGTACTACTGGGTT+GGG - Chr3:102714485-102714504 None:intergenic 45.0%
TCAACCGTCTTTCTATGCTC+AGG + Chr3:102716416-102716435 MsG0380017967.01.T01:CDS 45.0%
TCGGTTGCTAGCACCATTAT+TGG + Chr3:102717684-102717703 MsG0380017967.01.T01:three_prime_UTR 45.0%
TCTTTCTCCTTATCCCGTGA+AGG + Chr3:102712425-102712444 MsG0380017967.01.T01:CDS 45.0%
TGAAGTTCCAGGTTTGAACC+CGG - Chr3:102711716-102711735 None:intergenic 45.0%
TGAGCATAACTCAGTTGGCA+GGG - Chr3:102715476-102715495 None:intergenic 45.0%
TGATCTGTACATTGCCCCAA+TGG - Chr3:102712653-102712672 None:intergenic 45.0%
TGCATGCATGTAGACAATGG+AGG - Chr3:102716485-102716504 None:intergenic 45.0%
TGCTAAGGAGAGAGATTTGC+AGG + Chr3:102716991-102717010 MsG0380017967.01.T01:CDS 45.0%
TGGGCAGAACCCTTAGAATT+TGG - Chr3:102715592-102715611 None:intergenic 45.0%
TGTAACCCATCAGCTATTGC+AGG - Chr3:102714926-102714945 None:intergenic 45.0%
TGTGTCCAGCCTAGCAATAT+GGG - Chr3:102711688-102711707 None:intergenic 45.0%
TTACCTAAAGGCCTTGGGAA+GGG + Chr3:102712288-102712307 MsG0380017967.01.T01:CDS 45.0%
TTAGGGCGGACAACTTCATA+GGG - Chr3:102712231-102712250 None:intergenic 45.0%
TTATGGAACAGTCCTGGAAC+CGG - Chr3:102715012-102715031 None:intergenic 45.0%
TTCAGTTGCAGAAACCAGGT+CGG - Chr3:102715076-102715095 None:intergenic 45.0%
TTCTTCTCTAGCACGACAAC+AGG - Chr3:102713736-102713755 None:intergenic 45.0%
TTTACCTAAAGGCCTTGGGA+AGG + Chr3:102712287-102712306 MsG0380017967.01.T01:CDS 45.0%
! CAAACACCCACGGTTTTCTT+GGG - Chr3:102714958-102714977 None:intergenic 45.0%
! CAGGGTGGTTTGACTTTAGT+AGG + Chr3:102716349-102716368 MsG0380017967.01.T01:intron 45.0%
! CTCTGACACCACGCTTTTAT+TGG - Chr3:102717888-102717907 None:intergenic 45.0%
! GACTTCTTGTTTGGAGTCGA+TGG + Chr3:102713121-102713140 MsG0380017967.01.T01:CDS 45.0%
! GGGCATTGCCATTTGAACAA+AGG - Chr3:102711668-102711687 None:intergenic 45.0%
! GTTTTCCAGCCACCAAAAAG+TGG - Chr3:102713067-102713086 None:intergenic 45.0%
! TAAGAGGTGCATCTGCCTTT+AGG + Chr3:102712830-102712849 MsG0380017967.01.T01:CDS 45.0%
! TTGTCGCTTAGTTCCAGATC+AGG - Chr3:102717721-102717740 None:intergenic 45.0%
! TTTAGGGCGGACAACTTCAT+AGG - Chr3:102712232-102712251 None:intergenic 45.0%
!! CATACTTAGATGGGCTGATG+GGG - Chr3:102716263-102716282 None:intergenic 45.0%
!! CGTTGCTAAAGAGTTGGTGA+GGG + Chr3:102712614-102712633 MsG0380017967.01.T01:CDS 45.0%
!! TCATCAGGACTTGGTGCAAT+CGG + Chr3:102717665-102717684 MsG0380017967.01.T01:three_prime_UTR 45.0%
!! TTGCGTGATCTTTCTAGGAC+AGG + Chr3:102716720-102716739 MsG0380017967.01.T01:CDS 45.0%
!! TTTCAGGTTGTCTTGCCAGA+GGG + Chr3:102713528-102713547 MsG0380017967.01.T01:intron 45.0%
!!! GACACCTATTTTTGAGACGG+AGG + Chr3:102714161-102714180 MsG0380017967.01.T01:intron 45.0%
!!! TCAGTGAGAGCGTTTTGGTT+TGG + Chr3:102711191-102711210 MsG0380017967.01.T01:five_prime_UTR 45.0%
!! AAACAAAAATAAAATAATTA+TGG - Chr3:102716952-102716971 None:intergenic 5.0%
AACCTGACCCAAGAAAACCG+TGG + Chr3:102714948-102714967 MsG0380017967.01.T01:intron 50.0%
ACCTGACCCAAGAAAACCGT+GGG + Chr3:102714949-102714968 MsG0380017967.01.T01:intron 50.0%
CAAATCCAGCTAGTGCGTTG+AGG - Chr3:102714371-102714390 None:intergenic 50.0%
CAACTCTTTAGCAACGGCGA+AGG - Chr3:102712610-102712629 None:intergenic 50.0%
CAATGCCCATATTGCTAGGC+TGG + Chr3:102711680-102711699 MsG0380017967.01.T01:intron 50.0%
CACGACGGTCAACTTTGGTA+AGG - Chr3:102711336-102711355 None:intergenic 50.0%
CAGAAAACCCCAAACACCCA+CGG - Chr3:102714968-102714987 None:intergenic 50.0%
CATTCATCCGGGTTCAAACC+TGG + Chr3:102711706-102711725 MsG0380017967.01.T01:intron 50.0%
CATTCGAGTCACCCACCAAA+AGG + Chr3:102714451-102714470 MsG0380017967.01.T01:intron 50.0%
CATTCTCTACCTGCGACACA+AGG - Chr3:102712080-102712099 None:intergenic 50.0%
CCAACTGAGTTATGCTCACG+AGG + Chr3:102715478-102715497 MsG0380017967.01.T01:intron 50.0%
CCAAGAAAACCGTGGGTGTT+TGG + Chr3:102714956-102714975 MsG0380017967.01.T01:intron 50.0%
CCCTGATACGTATTTGCCCA+TGG + Chr3:102715996-102716015 MsG0380017967.01.T01:intron 50.0%
CCTCGTGAGCATAACTCAGT+TGG - Chr3:102715481-102715500 None:intergenic 50.0%
CGTATCGGGATACGTATCGT+GGG + Chr3:102716031-102716050 MsG0380017967.01.T01:intron 50.0%
CTAGGCTAGTACTACTGGGT+TGG - Chr3:102714486-102714505 None:intergenic 50.0%
CTAGGCTGGACACATTCATC+CGG + Chr3:102711694-102711713 MsG0380017967.01.T01:intron 50.0%
CTGCTGCAGACTTGACTATC+AGG + Chr3:102712795-102712814 MsG0380017967.01.T01:intron 50.0%
CTTCGCCGTTGCTAAAGAGT+TGG + Chr3:102712608-102712627 MsG0380017967.01.T01:CDS 50.0%
CTTGGCAGTAAGACGCCTAA+AGG - Chr3:102712848-102712867 None:intergenic 50.0%
GAAGGGCGAAAGTTTGACGT+TGG + Chr3:102712305-102712324 MsG0380017967.01.T01:CDS 50.0%
GAGCACCTTAAGAGTGGTAG+TGG - Chr3:102711534-102711553 None:intergenic 50.0%
GAGCAGAGAGAAACAGAGCA+TGG + Chr3:102715621-102715640 MsG0380017967.01.T01:intron 50.0%
GATATGCATCGTGGGATAGG+TGG + Chr3:102715136-102715155 MsG0380017967.01.T01:intron 50.0%
GATTGGACCTTCACGGGATA+AGG - Chr3:102712435-102712454 None:intergenic 50.0%
GCCATGGGCAAATACGTATC+AGG - Chr3:102716000-102716019 None:intergenic 50.0%
GCTCCCTGAGCATAGAAAGA+CGG - Chr3:102716423-102716442 None:intergenic 50.0%
GGCAAAGATCCAATGGGAAG+AGG + Chr3:102716540-102716559 MsG0380017967.01.T01:CDS 50.0%
GGTCAACCGCTTTCTGTTCT+AGG - Chr3:102715779-102715798 None:intergenic 50.0%
GTCACCCCACAAACTAGAAG+TGG - Chr3:102712923-102712942 None:intergenic 50.0%
GTGAGCATAACTCAGTTGGC+AGG - Chr3:102715477-102715496 None:intergenic 50.0%
GTGGGGTGACTCAAAAAAGG+TGG + Chr3:102712933-102712952 MsG0380017967.01.T01:intron 50.0%
GTTCGCCTGCAATAGCTGAT+GGG + Chr3:102714918-102714937 MsG0380017967.01.T01:intron 50.0%
TACTCTTGCGCCTGTATTGC+AGG + Chr3:102716381-102716400 MsG0380017967.01.T01:CDS 50.0%
TAGGCTGGACACATTCATCC+GGG + Chr3:102711695-102711714 MsG0380017967.01.T01:intron 50.0%
TATGGAACAGTCCTGGAACC+GGG - Chr3:102715011-102715030 None:intergenic 50.0%
TCAAACTTTCGCCCTTCCCA+AGG - Chr3:102712302-102712321 None:intergenic 50.0%
TCACTTGCAGAAACTGGGTC+AGG - Chr3:102715889-102715908 None:intergenic 50.0%
TCAGTTGCAGAAACCAGGTC+GGG - Chr3:102715075-102715094 None:intergenic 50.0%
TCGTATCGGGATACGTATCG+TGG + Chr3:102716030-102716049 MsG0380017967.01.T01:intron 50.0%
TCTCACTGAACCAGAGATCC+CGG - Chr3:102711180-102711199 None:intergenic 50.0%
TGCACCTCTTACATATGGCC+TGG - Chr3:102712821-102712840 None:intergenic 50.0%
TGGGATACGCCTGCTATACA+TGG + Chr3:102715957-102715976 MsG0380017967.01.T01:intron 50.0%
TGGGATATGCATCGTGGGAT+AGG + Chr3:102715133-102715152 MsG0380017967.01.T01:intron 50.0%
TGGTAAGGATGAGATCGGAG+AGG - Chr3:102711321-102711340 None:intergenic 50.0%
TTGAGCGATTGGACCTTCAC+GGG - Chr3:102712441-102712460 None:intergenic 50.0%
! AGGTGAATAAGTGGGGTGTC+CGG + Chr3:102715412-102715431 MsG0380017967.01.T01:intron 50.0%
! CAACCCAGTAGTACTAGCCT+AGG + Chr3:102714484-102714503 MsG0380017967.01.T01:intron 50.0%
! CCAAACACCCACGGTTTTCT+TGG - Chr3:102714959-102714978 None:intergenic 50.0%
! TGGATATGGGTTGCCACTTC+AGG + Chr3:102713099-102713118 MsG0380017967.01.T01:CDS 50.0%
! TTTGACGGGTCACACAATCC+CGG + Chr3:102715807-102715826 MsG0380017967.01.T01:intron 50.0%
!! CCGTTGCTAAAGAGTTGGTG+AGG + Chr3:102712613-102712632 MsG0380017967.01.T01:CDS 50.0%
!! CCTTAAGAGTGGTAGTGGTG+CGG - Chr3:102711529-102711548 None:intergenic 50.0%
!! CTTTCAGGTTGTCTTGCCAG+AGG + Chr3:102713527-102713546 MsG0380017967.01.T01:intron 50.0%
!! CTTTTGGTGGGTGACTCGAA+TGG - Chr3:102714453-102714472 None:intergenic 50.0%
!! GAACCTCGGTACCCACTTTT+TGG + Chr3:102713052-102713071 MsG0380017967.01.T01:CDS 50.0%
!! GGTGTTTGGGGTTTTCTGGA+GGG + Chr3:102714970-102714989 MsG0380017967.01.T01:intron 50.0%
!!! CTGGTTCAGTGAGAGCGTTT+TGG + Chr3:102711186-102711205 MsG0380017967.01.T01:five_prime_UTR 50.0%
CAGGCCAGGCCATATGTAAG+AGG + Chr3:102712814-102712833 MsG0380017967.01.T01:CDS 55.0%
CCGCACCACTACCACTCTTA+AGG + Chr3:102711526-102711545 MsG0380017967.01.T01:CDS 55.0%
GAGGACCTGGGAGGATAGAA+TGG - Chr3:102711302-102711321 None:intergenic 55.0%
GATGAGATCGGAGAGGACCT+GGG - Chr3:102711314-102711333 None:intergenic 55.0%
GCAGACTTGACTATCAGGCC+AGG + Chr3:102712800-102712819 MsG0380017967.01.T01:intron 55.0%
GCTGCAATTACCGGGATCTC+TGG + Chr3:102711167-102711186 MsG0380017967.01.T01:five_prime_UTR 55.0%
GGGGTGATTTCTGCCTGATC+TGG + Chr3:102717705-102717724 MsG0380017967.01.T01:three_prime_UTR 55.0%
GGTCGGTATTAGAAACGGGC+CGG - Chr3:102715829-102715848 None:intergenic 55.0%
GGTTCGCCTGCAATAGCTGA+TGG + Chr3:102714917-102714936 MsG0380017967.01.T01:intron 55.0%
GTCGGTATTAGAAACGGGCC+GGG - Chr3:102715828-102715847 None:intergenic 55.0%
GTGTCGCAGGTAGAGAATGC+AGG + Chr3:102712081-102712100 MsG0380017967.01.T01:intron 55.0%
TGCCGGTGCTTGCAACTTTC+AGG + Chr3:102713512-102713531 MsG0380017967.01.T01:intron 55.0%
! ACCCACGGTTTTCTTGGGTC+AGG - Chr3:102714953-102714972 None:intergenic 55.0%
! AGAAACTGGGTCAGGTTGCG+CGG - Chr3:102715881-102715900 None:intergenic 55.0%
! ATGAGCTCTTGGTGGCAGCT+TGG - Chr3:102712866-102712885 None:intergenic 55.0%
! CCACCAAAAAGTGGGTACCG+AGG - Chr3:102713058-102713077 None:intergenic 55.0%
! GGGTGCATGGACCTTTTGGT+GGG - Chr3:102714465-102714484 None:intergenic 55.0%
! GGTGAATAAGTGGGGTGTCC+GGG + Chr3:102715413-102715432 MsG0380017967.01.T01:intron 55.0%
! GGTTGGGTGCATGGACCTTT+TGG - Chr3:102714469-102714488 None:intergenic 55.0%
! GTACTACTGGGTTGGGTGCA+TGG - Chr3:102714478-102714497 None:intergenic 55.0%
! GTGAATAAGTGGGGTGTCCG+GGG + Chr3:102715414-102715433 MsG0380017967.01.T01:intron 55.0%
! TGGGTGCATGGACCTTTTGG+TGG - Chr3:102714466-102714485 None:intergenic 55.0%
!! CGTGGGTGTTTGGGGTTTTC+TGG + Chr3:102714966-102714985 MsG0380017967.01.T01:intron 55.0%
!! CTTAGATGGGCTGATGGGGT+TGG - Chr3:102716259-102716278 None:intergenic 55.0%
!! GGGTGTTTGGGGTTTTCTGG+AGG + Chr3:102714969-102714988 MsG0380017967.01.T01:intron 55.0%
!!! CCTCGGTACCCACTTTTTGG+TGG + Chr3:102713055-102713074 MsG0380017967.01.T01:CDS 55.0%
!!! GGTACCCACTTTTTGGTGGC+TGG + Chr3:102713059-102713078 MsG0380017967.01.T01:CDS 55.0%
AACAGTCCTGGAACCGGGTC+GGG - Chr3:102715006-102715025 None:intergenic 60.0%
CATGGCGGTGCTCAGAGCAA+AGG + Chr3:102712693-102712712 MsG0380017967.01.T01:CDS 60.0%
GAACAGTCCTGGAACCGGGT+CGG - Chr3:102715007-102715026 None:intergenic 60.0%
GCATCCCTCAACGCACTAGC+TGG + Chr3:102714363-102714382 MsG0380017967.01.T01:intron 60.0%
GGATGAGATCGGAGAGGACC+TGG - Chr3:102711315-102711334 None:intergenic 60.0%
GGGTCATGCAAAACCCGACC+CGG + Chr3:102714990-102715009 MsG0380017967.01.T01:intron 60.0%
GGTGGGTGACTCGAATGGAC+AGG - Chr3:102714448-102714467 None:intergenic 60.0%
TCGCCCTTCCCAAGGCCTTT+AGG - Chr3:102712294-102712313 None:intergenic 60.0%
GAGATCGGAGAGGACCTGGG+AGG - Chr3:102711311-102711330 None:intergenic 65.0%
GCAAAACCCGACCCGGTTCC+AGG + Chr3:102714997-102715016 MsG0380017967.01.T01:intron 65.0%
! CTGGTTCGCACATCCCGACC+TGG + Chr3:102715059-102715078 MsG0380017967.01.T01:intron 65.0%
GGTGTCCGGGGTTCGAACCC+CGG + Chr3:102715426-102715445 MsG0380017967.01.T01:intron 70.0%
! CTGGGTCAGGTTGCGCGGTC+CGG - Chr3:102715876-102715895 None:intergenic 70.0%
AGGGGCCGGGGTTCGAACCC+CGG - Chr3:102715434-102715453 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr3 gene 102711122 102718026 102711122 ID=MsG0380017967.01;Name=MsG0380017967.01
Chr3 mRNA 102711122 102718026 102711122 ID=MsG0380017967.01.T01;Parent=MsG0380017967.01;Name=MsG0380017967.01.T01;_AED=0.44;_eAED=0.45;_QI=125|0.9|0.90|1|0.9|0.81|11|501|633
Chr3 exon 102711122 102711354 102711122 ID=MsG0380017967.01.T01:exon:13418;Parent=MsG0380017967.01.T01
Chr3 exon 102711503 102711547 102711503 ID=MsG0380017967.01.T01:exon:13419;Parent=MsG0380017967.01.T01
Chr3 exon 102712090 102712727 102712090 ID=MsG0380017967.01.T01:exon:13420;Parent=MsG0380017967.01.T01
Chr3 exon 102712804 102712951 102712804 ID=MsG0380017967.01.T01:exon:13421;Parent=MsG0380017967.01.T01
Chr3 exon 102713037 102713213 102713037 ID=MsG0380017967.01.T01:exon:13422;Parent=MsG0380017967.01.T01
Chr3 exon 102713534 102713602 102713534 ID=MsG0380017967.01.T01:exon:13423;Parent=MsG0380017967.01.T01
Chr3 exon 102713700 102713789 102713700 ID=MsG0380017967.01.T01:exon:13424;Parent=MsG0380017967.01.T01
Chr3 exon 102716352 102716561 102716352 ID=MsG0380017967.01.T01:exon:13425;Parent=MsG0380017967.01.T01
Chr3 exon 102716645 102716869 102716645 ID=MsG0380017967.01.T01:exon:13426;Parent=MsG0380017967.01.T01
Chr3 exon 102716977 102717197 102716977 ID=MsG0380017967.01.T01:exon:13427;Parent=MsG0380017967.01.T01
Chr3 exon 102717555 102718026 102717555 ID=MsG0380017967.01.T01:exon:13428;Parent=MsG0380017967.01.T01
Chr3 five_prime_UTR 102711122 102711246 102711122 ID=MsG0380017967.01.T01:five_prime_utr;Parent=MsG0380017967.01.T01
Chr3 CDS 102711247 102711354 102711247 ID=MsG0380017967.01.T01:cds;Parent=MsG0380017967.01.T01
Chr3 CDS 102711503 102711547 102711503 ID=MsG0380017967.01.T01:cds;Parent=MsG0380017967.01.T01
Chr3 CDS 102712090 102712727 102712090 ID=MsG0380017967.01.T01:cds;Parent=MsG0380017967.01.T01
Chr3 CDS 102712804 102712951 102712804 ID=MsG0380017967.01.T01:cds;Parent=MsG0380017967.01.T01
Chr3 CDS 102713037 102713213 102713037 ID=MsG0380017967.01.T01:cds;Parent=MsG0380017967.01.T01
Chr3 CDS 102713534 102713602 102713534 ID=MsG0380017967.01.T01:cds;Parent=MsG0380017967.01.T01
Chr3 CDS 102713700 102713789 102713700 ID=MsG0380017967.01.T01:cds;Parent=MsG0380017967.01.T01
Chr3 CDS 102716352 102716561 102716352 ID=MsG0380017967.01.T01:cds;Parent=MsG0380017967.01.T01
Chr3 CDS 102716645 102716869 102716645 ID=MsG0380017967.01.T01:cds;Parent=MsG0380017967.01.T01
Chr3 CDS 102716977 102717168 102716977 ID=MsG0380017967.01.T01:cds;Parent=MsG0380017967.01.T01
Chr3 three_prime_UTR 102717169 102717197 102717169 ID=MsG0380017967.01.T01:three_prime_utr;Parent=MsG0380017967.01.T01
Chr3 three_prime_UTR 102717555 102718026 102717555 ID=MsG0380017967.01.T01:three_prime_utr;Parent=MsG0380017967.01.T01
Gene Sequence

>MsG0380017967.01.T01

ATGATGACGATGATGAGGTTGAATCTGCTTCTTTCGTTTGTATTCACATTTACCATTCTATCCTCCCAGGTCCTCTCCGATCTCATCCTTACCAAAGTTGACCGTCGTATTGATCTGTCATCACAAATTGTCCGCACCACTACCACTCTTAAGGTAGAGAATGCAGGATCTGATGTTGTTTCAGAAATCTTGTTGACCTTTCCTGATAACCATGTAAAGCACTTAGCATACATGTCAGCAACACTTAACGAAGGAAAGGGAAAGGCGAAATCATCTTCTGGTGTTGGTTTACCCTATGAAGTTGTCCGCCCTAAAGATATTCCCTCTTCCTTGGCAACTTATTCTGTAACTTTACCTAAAGGCCTTGGGAAGGGCGAAAGTTTGACGTTGGACATCTTGACAGTTTTTACCCATATATTGCAACCATTTCCAGAGAAAATTACGCAAGCTGACATTCAACTTCTGCTGTTTCAAGATAGTGCACAATATCTTTCTCCTTATCCCGTGAAGGTCCAATCGCTCAATGTTAAATTACCTGAGGCAAGAATAGAGTCCTACACAAAGCTGGAAAATACAAAACTTCAGGGATCTGAATTGAAATATGGTCCATATGAGAATCTTCCTCCATTCTCATACCTGCCAATTGTTATCCATTTTGAGAATAATCAGCCCTTCGCCGTTGCTAAAGAGTTGGTGAGGGAGATTGAGATATCCCATTGGGGCAATGTACAGATCACAGAGCATTATAATCTTGTTCATGGCGGTGCTCAGAGCAAAGGAGAATTTTCCAGACTTGACTATCAGGCCAGGCCATATGTAAGAGGTGCATCTGCCTTTAGGCGTCTTACTGCCAAGCTGCCACCAAGAGCTCATTCTGTTTACTACAGGGATGAAATCGGCAATATTTCCACTTCTAGTTTGTGGGGTGACTCAAAAAAGACAGAACTTGAGATCGAACCTCGGTACCCACTTTTTGGTGGCTGGAAAACTGCTTTTACCATTGGATATGGGTTGCCACTTCAGGACTTCTTGTTTGGAGTCGATGGAAAGCGCTTCCTTAATATCTCTTTTGGTTCCCCCATTAATGATTTGGTGATTGACACTCTTGTTGTGAAGGTTGTCTTGCCAGAGGGTTCAAAAGATATTTCACCATCTGTTCCATTTCCTGTGAAAGAAAGACATGAGACAAAGTTTTCACACTTGGATATTGCTGGTAGACCTGTTGTCGTGCTAGAGAAGAACAACGCTGTGCCTGAGCATAATGAGCATTTTCAGGGTGGTTTGACTTTAGTAGGTCTACTGATTACTCTTGCGCCTGTATTGCAGGTCTATTATAAGTTCAACCGTCTTTCTATGCTCAGGGAGCCGTTAATGTTGATTTCTGGCTTTTTCTTTCTATTTCTTGCCTCCATTGTCTACATGCATGCAGACTTATCGATCTCCAAGACTTCTGCATCTTATTTGGCAAAGATCCAATGGGAAGAGGTTCAAGCAACTATTCATCAGGTCCATAGTATCATTAGTCGTTGCTTAACAACACACGACAAGCTAGAAGCATCGTTGCGTGATCTTTCTAGGACAGGTGATATTCAAGGGTGTAAAGCAACCAGAAAATCAGTTGATAGCTCGTTGAAAGAGCTCACAAAGGAGTTGAAATCACCTGTGACATTTTTGCAGTCTTCTCCACAAGCCGCTCAAATATTACCCAAGGTGGAGGAAGTAATTGCTAAGGAGAGAGATTTGCAGGAGAAGCTTATGGCAAAACACACTACTGTTGTTGATTGTTATGAGAAGAAGTTAGGAGGAAGGGAAATTGAAAATCGGATTGCTTCACATCAGCAGAAAATTACATCTCTGAAACAAGAGATTTATGATCTTATGGACTTGATCGATGAGATATGA

Protein sequence

>MsG0380017967.01.T01

MMTMMRLNLLLSFVFTFTILSSQVLSDLILTKVDRRIDLSSQIVRTTTTLKVENAGSDVVSEILLTFPDNHVKHLAYMSATLNEGKGKAKSSSGVGLPYEVVRPKDIPSSLATYSVTLPKGLGKGESLTLDILTVFTHILQPFPEKITQADIQLLLFQDSAQYLSPYPVKVQSLNVKLPEARIESYTKLENTKLQGSELKYGPYENLPPFSYLPIVIHFENNQPFAVAKELVREIEISHWGNVQITEHYNLVHGGAQSKGEFSRLDYQARPYVRGASAFRRLTAKLPPRAHSVYYRDEIGNISTSSLWGDSKKTELEIEPRYPLFGGWKTAFTIGYGLPLQDFLFGVDGKRFLNISFGSPINDLVIDTLVVKVVLPEGSKDISPSVPFPVKERHETKFSHLDIAGRPVVVLEKNNAVPEHNEHFQGGLTLVGLLITLAPVLQVYYKFNRLSMLREPLMLISGFFFLFLASIVYMHADLSISKTSASYLAKIQWEEVQATIHQVHSIISRCLTTHDKLEASLRDLSRTGDIQGCKATRKSVDSSLKELTKELKSPVTFLQSSPQAAQILPKVEEVIAKERDLQEKLMAKHTTVVDCYEKKLGGREIENRIASHQQKITSLKQEIYDLMDLIDEI*