AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280007844.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007844.01.T01 MTR_2g033920 95.109 368 18 0 1 368 1 368 0.0 724
MsG0280007844.01.T01 MTR_2g033920 94.576 295 16 0 1 295 1 295 0.0 570
MsG0280007844.01.T01 MTR_2g033930 65.812 351 118 1 18 368 15 363 9.42e-172 483
MsG0280007844.01.T01 MTR_4g122200 61.518 369 140 2 1 368 1 368 1.41e-165 468
MsG0280007844.01.T01 MTR_8g079050 47.253 364 180 4 14 365 10 373 7.78e-115 339
MsG0280007844.01.T01 MTR_3g005650 41.873 363 202 6 6 367 2 356 3.00e-91 278
MsG0280007844.01.T01 MTR_0565s0010 41.243 354 200 7 18 367 15 364 1.08e-87 269
MsG0280007844.01.T01 MTR_8g087890 40.390 359 205 7 14 367 8 362 6.93e-86 265
MsG0280007844.01.T01 MTR_5g078210 42.633 319 174 5 36 351 26 338 4.17e-84 259
MsG0280007844.01.T01 MTR_3g024510 39.496 357 207 7 15 367 18 369 4.87e-83 257
MsG0280007844.01.T01 MTR_3g435540 44.340 318 168 7 37 350 25 337 3.10e-82 255
MsG0280007844.01.T01 MTR_3g098270 40.469 341 191 4 34 367 33 368 4.59e-82 255
MsG0280007844.01.T01 MTR_4g108690 43.711 318 170 7 37 350 29 341 3.30e-81 253
MsG0280007844.01.T01 MTR_4g035353 37.088 364 223 4 8 367 1 362 8.46e-81 251
MsG0280007844.01.T01 MTR_1g069175 36.240 367 229 4 3 366 1 365 1.72e-78 246
MsG0280007844.01.T01 MTR_1g024890 36.740 362 224 4 7 366 4 362 1.35e-77 243
MsG0280007844.01.T01 MTR_7g116570 38.757 338 202 4 31 366 30 364 2.67e-77 243
MsG0280007844.01.T01 MTR_5g093090 36.723 354 207 6 24 368 17 362 4.69e-77 242
MsG0280007844.01.T01 MTR_7g116500 36.080 352 219 5 18 366 15 363 3.61e-74 234
MsG0280007844.01.T01 MTR_1g079540 36.467 351 218 4 18 366 14 361 4.75e-74 234
MsG0280007844.01.T01 MTR_7g116510 37.069 348 215 3 21 366 11 356 1.13e-73 233
MsG0280007844.01.T01 MTR_7g116520 36.620 355 220 4 14 366 13 364 8.53e-72 228
MsG0280007844.01.T01 MTR_3g005660 40.896 335 187 10 37 365 38 367 2.91e-71 227
MsG0280007844.01.T01 MTR_4g019880 36.283 339 209 5 32 366 29 364 1.02e-69 223
MsG0280007844.01.T01 MTR_3g052490 36.901 355 207 6 21 366 18 364 1.40e-69 223
MsG0280007844.01.T01 MTR_3g052580 35.311 354 213 6 21 366 14 359 1.65e-68 221
MsG0280007844.01.T01 MTR_3g052480 36.364 374 217 9 5 366 2 366 2.10e-68 219
MsG0280007844.01.T01 MTR_3g052580 35.028 354 214 6 21 366 13 358 2.56e-68 221
MsG0280007844.01.T01 MTR_1g079530 35.933 359 213 7 16 366 4 353 2.86e-68 219
MsG0280007844.01.T01 MTR_7g008060 35.312 337 200 5 32 366 30 350 1.16e-66 215
MsG0280007844.01.T01 MTR_6g021530 35.736 333 208 4 37 366 31 360 1.37e-64 209
MsG0280007844.01.T01 MTR_5g009100 36.050 319 199 3 37 353 48 363 2.56e-64 209
MsG0280007844.01.T01 MTR_8g074570 34.146 369 211 11 15 365 15 369 3.79e-62 203
MsG0280007844.01.T01 MTR_3g023220 40.118 339 176 9 37 368 35 353 3.90e-62 203
MsG0280007844.01.T01 MTR_3g082830 35.276 326 200 7 30 350 33 352 6.00e-62 202
MsG0280007844.01.T01 MTR_1g025760 34.758 351 213 8 1 340 39 384 1.53e-61 203
MsG0280007844.01.T01 MTR_2g044100 34.211 342 206 9 35 366 43 375 3.39e-61 202
MsG0280007844.01.T01 MTR_5g084790 35.735 347 212 7 9 350 6 346 7.07e-61 200
MsG0280007844.01.T01 MTR_2g100620 35.093 322 201 6 33 350 29 346 7.66e-61 199
MsG0280007844.01.T01 MTR_5g078210 40.659 273 154 5 26 295 17 284 1.77e-60 198
MsG0280007844.01.T01 MTR_5g084750 34.615 338 210 7 18 350 13 344 1.88e-60 199
MsG0280007844.01.T01 MTR_5g074270 35.447 347 211 8 10 349 8 348 2.20e-60 199
MsG0280007844.01.T01 MTR_1g025780 35.404 322 199 6 33 351 39 354 7.90e-60 197
MsG0280007844.01.T01 MTR_3g464730 34.615 338 211 7 19 351 12 344 2.42e-59 196
MsG0280007844.01.T01 MTR_8g014910 34.451 328 207 6 27 350 24 347 3.23e-59 195
MsG0280007844.01.T01 MTR_8g075220 33.945 327 200 9 35 351 40 360 1.20e-58 194
MsG0280007844.01.T01 MTR_8g075200 32.219 329 212 7 35 358 41 363 1.70e-56 190
MsG0280007844.01.T01 MTR_1g025720 34.006 347 213 6 11 346 5 346 2.67e-56 188
MsG0280007844.01.T01 MTR_2g084585 32.919 322 207 7 33 350 28 344 2.74e-56 187
MsG0280007844.01.T01 MTR_3g114090 35.826 321 193 8 35 351 36 347 1.05e-55 186
MsG0280007844.01.T01 MTR_2g017955 36.533 323 189 10 31 349 29 339 1.80e-55 186
MsG0280007844.01.T01 MTR_8g087870 34.513 339 205 9 32 367 26 350 2.29e-55 185
MsG0280007844.01.T01 MTR_5g093090 36.655 281 162 5 24 295 17 290 7.14e-55 182
MsG0280007844.01.T01 MTR_2g017875 39.048 315 174 10 37 346 36 337 7.24e-55 184
MsG0280007844.01.T01 MTR_3g021460 33.423 371 212 12 3 368 10 350 1.84e-54 183
MsG0280007844.01.T01 MTR_2g017925 38.154 325 181 11 31 351 29 337 2.84e-54 183
MsG0280007844.01.T01 MTR_4g056280 34.985 323 199 7 33 350 28 344 5.00e-54 182
MsG0280007844.01.T01 MTR_4g056160 35.061 328 195 9 33 350 25 344 8.11e-54 181
MsG0280007844.01.T01 MTR_8g074560 32.044 362 232 8 15 367 11 367 1.38e-53 181
MsG0280007844.01.T01 MTR_1g025700 33.856 319 203 5 26 341 41 354 3.39e-53 180
MsG0280007844.01.T01 MTR_2g461580 33.898 354 208 11 19 366 15 348 5.40e-53 179
MsG0280007844.01.T01 MTR_5g084770 31.657 338 221 7 18 350 11 343 9.48e-53 178
MsG0280007844.01.T01 MTR_3g114120 35.256 312 192 6 33 340 45 350 4.33e-52 177
MsG0280007844.01.T01 MTR_8g031420 32.951 349 209 10 29 367 29 362 1.77e-51 176
MsG0280007844.01.T01 MTR_8g075230 33.333 345 219 7 18 356 17 356 1.84e-51 175
MsG0280007844.01.T01 MTR_2g015080 33.815 346 208 9 12 341 12 352 2.74e-51 175
MsG0280007844.01.T01 MTR_0009s0250 34.706 340 196 10 18 348 12 334 5.59e-51 174
MsG0280007844.01.T01 MTR_5g022640 30.579 363 236 8 5 356 7 364 3.14e-50 172
MsG0280007844.01.T01 MTR_2g017965 35.312 337 194 13 21 346 14 337 1.59e-49 171
MsG0280007844.01.T01 MTR_2g017915 34.916 358 189 13 8 355 1 324 2.26e-49 170
MsG0280007844.01.T01 MTR_8g031430 30.994 342 213 8 35 367 37 364 4.03e-49 169
MsG0280007844.01.T01 MTR_8g074580 29.157 415 228 10 10 366 11 417 5.08e-49 171
MsG0280007844.01.T01 MTR_8g022810 31.593 364 225 10 5 355 9 361 5.40e-49 169
MsG0280007844.01.T01 MTR_4g087985 31.755 359 215 11 15 352 17 366 2.90e-48 167
MsG0280007844.01.T01 MTR_5g022630 30.270 370 232 10 8 356 1 365 6.69e-48 166
MsG0280007844.01.T01 MTR_1g025680 33.654 312 198 7 33 340 32 338 3.78e-47 166
MsG0280007844.01.T01 MTR_8g031400 32.267 344 206 11 35 367 37 364 3.54e-45 159
MsG0280007844.01.T01 MTR_8g031390 30.769 351 219 9 26 367 28 363 1.06e-44 158
MsG0280007844.01.T01 MTR_8g022790 32.174 345 213 9 29 367 31 360 1.13e-43 155
MsG0280007844.01.T01 MTR_5g083040 31.562 320 199 10 31 338 28 339 1.31e-41 149
MsG0280007844.01.T01 MTR_1g025910 28.485 330 227 4 40 366 41 364 3.02e-40 146
MsG0280007844.01.T01 MTR_1g079590 41.053 190 109 2 18 205 14 202 6.98e-38 135
MsG0280007844.01.T01 MTR_0127s0040 32.636 239 154 6 131 367 4 237 1.15e-37 135
MsG0280007844.01.T01 MTR_8g038680 31.909 351 195 11 35 356 28 363 2.51e-37 138
MsG0280007844.01.T01 MTR_5g093090 39.175 194 105 4 24 208 17 206 3.37e-37 134
MsG0280007844.01.T01 MTR_8g031390 31.525 295 183 8 26 316 28 307 2.46e-35 132
MsG0280007844.01.T01 MTR_7g033155 27.820 399 217 11 15 358 9 391 3.03e-35 133
MsG0280007844.01.T01 MTR_5g087690 28.261 322 202 8 37 347 52 355 7.83e-35 132
MsG0280007844.01.T01 MTR_7g111780 30.973 339 198 13 30 351 31 350 9.25e-35 131
MsG0280007844.01.T01 MTR_7g087190 28.775 351 210 10 35 356 43 382 1.34e-34 131
MsG0280007844.01.T01 MTR_6g007100 29.970 337 204 11 35 356 33 352 3.12e-34 130
MsG0280007844.01.T01 MTR_8g022810 28.022 364 185 12 5 355 9 308 1.29e-33 127
MsG0280007844.01.T01 MTR_7g116870 27.714 350 211 10 34 356 32 366 1.82e-33 128
MsG0280007844.01.T01 MTR_7g033150 27.835 388 226 11 10 356 1 375 1.34e-32 126
MsG0280007844.01.T01 MTR_8g089805 28.986 345 216 10 35 356 40 378 2.71e-31 122
MsG0280007844.01.T01 MTR_8g028160 28.424 387 224 15 7 356 3 373 2.72e-31 122
MsG0280007844.01.T01 MTR_1g030340 28.571 350 209 12 35 356 42 378 4.37e-31 122
MsG0280007844.01.T01 MTR_6g007090 30.709 381 219 13 7 356 3 369 4.95e-31 121
MsG0280007844.01.T01 MTR_1g030268 29.191 346 209 11 35 356 40 373 1.24e-30 120
MsG0280007844.01.T01 MTR_2g015650 30.400 375 205 14 16 352 3 359 1.49e-30 120
MsG0280007844.01.T01 MTR_1g030220 28.947 380 224 12 13 356 6 375 1.57e-30 120
MsG0280007844.01.T01 MTR_6g007095 29.851 335 196 11 39 353 369 684 6.29e-30 121
MsG0280007844.01.T01 MTR_6g007095 29.630 351 198 13 35 356 41 371 8.16e-26 109
MsG0280007844.01.T01 MTR_2g018015 37.864 206 115 6 30 228 31 230 1.00e-29 116
MsG0280007844.01.T01 MTR_1g030230 29.700 367 218 12 18 356 13 367 2.04e-29 117
MsG0280007844.01.T01 MTR_1g030275 28.696 345 212 10 35 356 39 372 4.62e-29 116
MsG0280007844.01.T01 MTR_7g113860 28.647 377 202 15 21 356 15 365 4.68e-28 113
MsG0280007844.01.T01 MTR_3g463960 28.530 347 204 10 34 352 43 373 1.49e-27 112
MsG0280007844.01.T01 MTR_3g463950 28.530 347 204 10 34 352 43 373 1.49e-27 112
MsG0280007844.01.T01 MTR_3g463970 28.530 347 204 10 34 352 43 373 1.49e-27 112
MsG0280007844.01.T01 MTR_3g463940 28.530 347 204 10 34 352 43 373 1.49e-27 112
MsG0280007844.01.T01 MTR_7g113860 29.006 362 192 15 35 356 35 371 2.03e-27 111
MsG0280007844.01.T01 MTR_2g079090 31.065 338 192 14 34 352 29 344 3.72e-27 110
MsG0280007844.01.T01 MTR_7g033165 29.060 351 220 10 28 356 26 369 1.00e-26 109
MsG0280007844.01.T01 MTR_2g015580 27.596 337 213 13 37 352 49 375 1.15e-26 110
MsG0280007844.01.T01 MTR_2g043980 30.168 358 200 15 19 352 15 346 1.28e-26 109
MsG0280007844.01.T01 MTR_8g012540 31.056 322 184 11 35 330 28 337 1.84e-26 108
MsG0280007844.01.T01 MTR_0029s0050 30.769 338 193 13 34 352 29 344 2.22e-26 108
MsG0280007844.01.T01 MTR_2g079080 30.473 338 194 13 34 352 29 344 3.18e-26 108
MsG0280007844.01.T01 MTR_1108s0010 30.093 216 135 5 136 350 3 203 3.56e-26 104
MsG0280007844.01.T01 MTR_0029s0100 30.769 338 193 13 34 352 29 344 4.12e-26 107
MsG0280007844.01.T01 MTR_4g104240 26.975 367 224 12 12 353 16 363 1.11e-25 107
MsG0280007844.01.T01 MTR_1g092690 28.707 317 184 14 37 339 53 341 1.16e-25 106
MsG0280007844.01.T01 MTR_7g111780 31.188 202 120 6 160 351 59 251 1.32e-25 104
MsG0280007844.01.T01 MTR_1g060490 28.754 313 194 12 37 341 39 330 4.10e-25 104
MsG0280007844.01.T01 MTR_1g092740 27.692 325 198 13 37 349 40 339 4.16e-25 104
MsG0280007844.01.T01 MTR_3g463930 27.874 348 212 9 34 352 43 380 5.55e-25 105
MsG0280007844.01.T01 MTR_1g082390 27.954 347 202 13 35 350 31 360 2.53e-24 102
MsG0280007844.01.T01 MTR_7g104220 28.750 320 194 11 33 341 40 336 3.77e-24 102
MsG0280007844.01.T01 MTR_2g015590 26.923 364 230 12 13 352 9 360 4.28e-24 102
MsG0280007844.01.T01 MTR_2g015630 27.907 344 199 14 40 352 36 361 1.00e-23 101
MsG0280007844.01.T01 MTR_3g069780 28.406 345 204 12 34 352 29 356 3.73e-23 99.8
MsG0280007844.01.T01 MTR_2g017925 30.000 250 155 9 105 352 4 235 4.83e-23 97.4
MsG0280007844.01.T01 MTR_8g089805 27.703 296 189 8 83 356 18 310 9.39e-23 97.8
MsG0280007844.01.T01 MTR_4g036375 35.570 149 92 3 33 178 28 175 1.64e-22 94.0
MsG0280007844.01.T01 MTR_3g438030 28.116 345 205 12 34 352 29 356 3.04e-22 97.1
MsG0280007844.01.T01 MTR_2g087292 27.976 336 151 10 18 346 12 263 3.17e-22 95.5
MsG0280007844.01.T01 MTR_1g092750 28.025 314 190 14 37 338 42 331 3.89e-22 96.7
MsG0280007844.01.T01 MTR_5g074210 37.324 142 85 3 210 349 65 204 4.47e-22 93.6
MsG0280007844.01.T01 MTR_1g030268 30.104 289 173 11 35 307 40 315 1.31e-21 94.7
MsG0280007844.01.T01 MTR_1g030265 29.153 295 177 10 86 356 54 340 2.21e-21 94.4
MsG0280007844.01.T01 MTR_2g015670 30.149 335 197 12 35 352 31 345 2.37e-21 94.4
MsG0280007844.01.T01 MTR_1g092760 28.571 315 186 15 37 338 41 329 2.38e-21 94.4
MsG0280007844.01.T01 MTR_2g017895 28.328 293 175 11 80 367 4 266 6.78e-21 91.7
MsG0280007844.01.T01 MTR_7g113860 27.817 284 152 11 108 356 32 297 1.72e-20 91.3
MsG0280007844.01.T01 MTR_3g448360 26.781 351 203 13 34 352 28 356 2.47e-18 85.9
MsG0280007844.01.T01 MTR_6g049220 47.253 91 45 2 33 120 28 118 9.25e-18 80.5
MsG0280007844.01.T01 MTR_1g079570 30.435 138 94 2 229 366 4 139 6.99e-17 77.0
MsG0280007844.01.T01 MTR_3g069520 27.714 350 198 15 34 352 29 354 3.03e-15 76.6
MsG0280007844.01.T01 MTR_2g015590 25.949 316 200 11 13 306 9 312 9.80e-15 74.7
MsG0280007844.01.T01 MTR_6g049230 33.088 136 81 2 201 331 64 194 9.81e-15 72.4
MsG0280007844.01.T01 MTR_7g033165 27.660 282 183 8 28 295 26 300 1.67e-14 73.9
MsG0280007844.01.T01 MTR_3g011860 42.529 87 49 1 240 326 237 322 2.06e-12 67.8
MsG0280007844.01.T01 MTR_8g062580 34.783 115 72 3 234 347 66 178 1.57e-11 64.3
MsG0280007844.01.T01 MTR_4g036385 30.645 124 76 3 232 350 10 128 4.49e-11 60.5
MsG0280007844.01.T01 MTR_5g084880 35.227 88 57 0 208 295 25 112 5.53e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007844.01.T01 AT2G23540 46.903 339 174 3 33 365 46 384 1.02e-112 334
MsG0280007844.01.T01 AT3G50400 47.647 340 171 4 33 365 32 371 2.05e-111 330
MsG0280007844.01.T01 AT5G15720 46.450 338 172 5 35 367 30 363 5.19e-96 290
MsG0280007844.01.T01 AT4G16230 55.102 245 108 2 10 252 4 248 6.41e-91 273
MsG0280007844.01.T01 AT1G71691 45.075 335 175 6 33 365 53 380 1.13e-89 275
MsG0280007844.01.T01 AT1G29660 42.493 353 196 6 18 367 15 363 1.36e-89 274
MsG0280007844.01.T01 AT5G41890 41.834 349 178 7 35 365 31 372 1.38e-89 274
MsG0280007844.01.T01 AT1G29670 42.222 360 191 10 18 367 10 362 7.56e-88 270
MsG0280007844.01.T01 AT1G29670 42.222 360 191 10 18 367 78 430 1.03e-86 269
MsG0280007844.01.T01 AT1G71250 39.403 335 200 3 32 365 38 370 8.23e-84 259
MsG0280007844.01.T01 AT5G45670 42.943 333 182 7 37 365 31 359 3.38e-83 258
MsG0280007844.01.T01 AT4G18970 42.090 335 186 7 37 367 30 360 1.06e-81 254
MsG0280007844.01.T01 AT5G08460 41.124 338 192 4 35 367 49 384 5.23e-81 253
MsG0280007844.01.T01 AT5G37690 41.509 318 177 5 36 350 28 339 1.48e-80 251
MsG0280007844.01.T01 AT4G18970 42.090 335 186 7 37 367 30 360 1.71e-80 252
MsG0280007844.01.T01 AT1G74460 42.320 319 175 8 36 350 24 337 2.33e-77 243
MsG0280007844.01.T01 AT5G37690 39.937 318 174 6 36 350 28 331 2.24e-73 232
MsG0280007844.01.T01 AT5G15720 48.120 266 130 4 35 295 30 292 2.28e-73 231
MsG0280007844.01.T01 AT4G10950 36.283 339 210 4 33 368 69 404 8.75e-73 232
MsG0280007844.01.T01 AT4G28780 34.085 355 225 4 18 366 10 361 1.98e-70 225
MsG0280007844.01.T01 AT4G10950 36.283 339 206 5 33 368 69 400 2.65e-70 226
MsG0280007844.01.T01 AT1G33811 38.710 341 190 10 21 347 15 350 2.94e-70 224
MsG0280007844.01.T01 AT1G71691 48.302 265 129 5 33 295 53 311 4.72e-70 222
MsG0280007844.01.T01 AT5G18430 34.341 364 230 6 6 366 3 360 1.87e-69 222
MsG0280007844.01.T01 AT3G04290 36.637 333 206 4 32 362 26 355 2.43e-69 222
MsG0280007844.01.T01 AT5G33370 34.925 335 213 4 34 366 29 360 9.54e-68 218
MsG0280007844.01.T01 AT5G15720 40.830 289 162 5 84 367 48 332 2.37e-66 213
MsG0280007844.01.T01 AT1G71691 39.789 284 163 5 83 365 3 279 1.82e-64 207
MsG0280007844.01.T01 AT2G04570 36.522 345 207 9 13 351 5 343 7.64e-64 207
MsG0280007844.01.T01 AT5G55050 35.777 341 201 9 37 366 41 374 3.13e-61 201
MsG0280007844.01.T01 AT2G42990 36.070 341 202 9 18 350 10 342 7.97e-60 197
MsG0280007844.01.T01 AT1G75880 34.890 364 212 8 4 351 14 368 2.22e-59 196
MsG0280007844.01.T01 AT4G26790 33.742 326 207 6 32 353 26 346 5.84e-59 195
MsG0280007844.01.T01 AT4G26790 33.742 326 207 6 32 353 26 346 5.84e-59 195
MsG0280007844.01.T01 AT1G58430 34.473 351 199 11 9 341 5 342 6.05e-58 192
MsG0280007844.01.T01 AT3G16370 33.939 330 210 6 25 350 20 345 7.23e-58 192
MsG0280007844.01.T01 AT1G75880 34.615 364 212 9 4 351 14 367 2.49e-57 191
MsG0280007844.01.T01 AT5G22810 35.674 356 203 12 11 350 6 351 3.31e-57 190
MsG0280007844.01.T01 AT2G31540 33.739 329 191 10 35 349 35 350 1.49e-55 186
MsG0280007844.01.T01 AT1G06990 33.540 322 202 7 35 350 37 352 1.58e-55 186
MsG0280007844.01.T01 AT1G75890 35.737 319 195 8 35 348 47 360 2.41e-55 186
MsG0280007844.01.T01 AT3G53100 36.257 342 204 9 16 350 9 343 2.76e-55 185
MsG0280007844.01.T01 AT2G19060 33.524 349 208 11 13 352 3 336 3.14e-55 185
MsG0280007844.01.T01 AT1G75890 35.737 319 195 8 35 348 76 389 4.34e-55 186
MsG0280007844.01.T01 AT2G24560 35.016 317 187 9 35 341 34 341 9.76e-55 184
MsG0280007844.01.T01 AT4G30140 34.835 333 194 11 37 366 35 347 8.09e-54 181
MsG0280007844.01.T01 AT1G75890 34.743 331 195 9 35 348 47 373 1.29e-53 181
MsG0280007844.01.T01 AT1G20120 34.568 324 201 8 35 353 78 395 1.45e-53 182
MsG0280007844.01.T01 AT5G03820 34.365 323 203 6 33 350 31 349 3.30e-53 180
MsG0280007844.01.T01 AT1G71120 32.174 345 210 9 30 365 26 355 7.23e-53 179
MsG0280007844.01.T01 AT5G03820 34.365 323 203 6 33 350 59 377 8.48e-53 179
MsG0280007844.01.T01 AT1G53920 34.000 350 208 10 31 367 44 383 1.60e-52 179
MsG0280007844.01.T01 AT1G75900 32.508 323 208 7 33 351 41 357 4.75e-52 177
MsG0280007844.01.T01 AT2G30310 33.041 342 198 11 18 341 13 341 5.19e-52 177
MsG0280007844.01.T01 AT2G19050 32.471 348 212 10 13 352 3 335 6.79e-52 176
MsG0280007844.01.T01 AT5G42170 34.783 322 198 9 33 350 48 361 1.19e-50 174
MsG0280007844.01.T01 AT2G30220 34.906 318 186 10 35 341 33 340 1.41e-50 173
MsG0280007844.01.T01 AT5G03810 33.846 325 201 9 33 350 28 345 1.54e-50 173
MsG0280007844.01.T01 AT5G45960 34.375 320 191 9 31 339 43 354 1.99e-50 173
MsG0280007844.01.T01 AT2G40250 32.132 333 203 7 28 347 29 351 1.24e-49 171
MsG0280007844.01.T01 AT1G20132 33.951 324 199 8 35 351 61 376 1.41e-49 171
MsG0280007844.01.T01 AT4G16233 56.693 127 55 0 239 365 1 127 1.13e-48 161
MsG0280007844.01.T01 AT5G33370 34.470 264 169 3 34 295 29 290 3.39e-48 166
MsG0280007844.01.T01 AT2G19010 31.165 369 230 11 6 367 26 377 8.04e-48 166
MsG0280007844.01.T01 AT2G19010 32.733 333 205 10 37 367 32 347 8.48e-48 166
MsG0280007844.01.T01 AT5G45950 30.982 326 212 8 26 348 31 346 1.66e-47 165
MsG0280007844.01.T01 AT3G14820 33.129 326 205 8 29 350 26 342 1.83e-47 165
MsG0280007844.01.T01 AT5G40990 31.378 341 221 5 35 367 37 372 1.07e-46 163
MsG0280007844.01.T01 AT1G73610 32.308 325 198 8 30 350 30 336 1.34e-46 162
MsG0280007844.01.T01 AT1G75920 30.532 357 211 12 11 351 1 336 2.77e-46 161
MsG0280007844.01.T01 AT3G14225 29.213 356 237 6 23 367 25 376 2.98e-46 162
MsG0280007844.01.T01 AT3G14225 29.379 354 235 6 23 367 25 372 3.85e-46 162
MsG0280007844.01.T01 AT1G59406 34.146 328 194 10 33 351 28 342 4.57e-46 161
MsG0280007844.01.T01 AT1G59030 34.146 328 194 10 33 351 28 342 4.57e-46 161
MsG0280007844.01.T01 AT1G58725 34.146 328 194 10 33 351 28 342 4.57e-46 161
MsG0280007844.01.T01 AT5G63170 31.832 333 196 9 18 341 11 321 1.82e-45 159
MsG0280007844.01.T01 AT1G20135 31.642 335 200 11 17 341 7 322 2.55e-45 158
MsG0280007844.01.T01 AT2G03980 34.268 321 190 7 35 346 43 351 2.43e-44 157
MsG0280007844.01.T01 AT2G03980 34.268 321 190 7 35 346 43 351 2.43e-44 157
MsG0280007844.01.T01 AT2G03980 34.268 321 190 7 35 346 43 351 2.43e-44 157
MsG0280007844.01.T01 AT2G03980 34.268 321 190 7 35 346 43 351 2.43e-44 157
MsG0280007844.01.T01 AT1G75910 29.714 350 223 9 18 358 8 343 4.21e-43 153
MsG0280007844.01.T01 AT2G24560 35.379 277 161 8 35 301 34 302 9.20e-43 151
MsG0280007844.01.T01 AT1G75920 29.692 357 203 12 22 351 11 346 3.44e-42 151
MsG0280007844.01.T01 AT1G20130 31.157 337 202 8 33 351 182 506 4.01e-42 154
MsG0280007844.01.T01 AT1G20130 31.157 337 202 8 33 351 202 526 5.69e-42 154
MsG0280007844.01.T01 AT1G53940 30.702 342 222 7 35 367 39 374 1.44e-41 150
MsG0280007844.01.T01 AT2G19050 35.294 255 153 7 29 281 25 269 3.29e-41 146
MsG0280007844.01.T01 AT1G23500 31.940 335 199 9 26 352 26 339 5.26e-41 147
MsG0280007844.01.T01 AT1G58520 32.344 337 199 11 24 351 19 335 3.69e-40 145
MsG0280007844.01.T01 AT1G58525 32.344 337 199 11 24 351 19 335 3.69e-40 145
MsG0280007844.01.T01 AT1G53990 29.651 344 216 9 35 367 35 363 1.07e-39 144
MsG0280007844.01.T01 AT1G54790 30.102 392 204 14 5 356 7 368 5.17e-39 143
MsG0280007844.01.T01 AT1G75920 28.286 350 195 11 9 351 5 305 2.20e-37 137
MsG0280007844.01.T01 AT3G43570 30.226 354 198 11 6 351 1 313 6.98e-37 136
MsG0280007844.01.T01 AT1G75920 29.808 312 186 11 52 351 18 308 2.00e-36 134
MsG0280007844.01.T01 AT1G75930 30.675 326 199 12 34 350 28 335 2.64e-36 135
MsG0280007844.01.T01 AT3G05180 29.508 366 217 12 23 360 24 376 4.33e-36 135
MsG0280007844.01.T01 AT1G54030 27.381 336 216 11 34 366 51 361 1.04e-34 132
MsG0280007844.01.T01 AT1G67830 30.259 347 201 12 35 352 30 364 1.15e-34 131
MsG0280007844.01.T01 AT1G54790 28.535 389 211 14 8 356 6 367 4.27e-34 130
MsG0280007844.01.T01 AT4G01130 27.419 372 224 12 12 352 11 367 1.90e-33 128
MsG0280007844.01.T01 AT3G43550 31.973 294 188 6 6 295 1 286 2.40e-33 125
MsG0280007844.01.T01 AT4G16220 55.752 113 46 2 17 125 9 121 5.26e-33 124
MsG0280007844.01.T01 AT3G27950 28.533 368 218 13 18 356 10 361 1.26e-32 125
MsG0280007844.01.T01 AT1G54020 27.844 334 216 11 37 366 35 347 1.58e-32 125
MsG0280007844.01.T01 AT1G56670 29.607 331 202 11 37 351 42 357 4.68e-32 124
MsG0280007844.01.T01 AT1G09390 30.514 331 199 11 37 351 39 354 4.55e-31 121
MsG0280007844.01.T01 AT2G04020 31.034 319 161 9 35 346 43 309 7.16e-31 120
MsG0280007844.01.T01 AT2G31550 31.579 209 121 6 151 349 13 209 8.73e-31 117
MsG0280007844.01.T01 AT1G28650 28.457 376 225 16 20 368 22 380 2.40e-30 120
MsG0280007844.01.T01 AT5G14450 29.551 379 226 13 9 356 9 377 2.43e-30 120
MsG0280007844.01.T01 AT3G62280 30.029 343 195 13 30 350 31 350 1.33e-29 117
MsG0280007844.01.T01 AT2G04020 36.946 203 112 5 35 231 43 235 3.27e-29 114
MsG0280007844.01.T01 AT1G28570 28.446 341 202 13 39 352 38 363 8.57e-29 115
MsG0280007844.01.T01 AT1G54000 26.667 345 217 11 33 365 34 354 9.84e-29 115
MsG0280007844.01.T01 AT3G26430 28.045 353 223 9 28 356 24 369 1.19e-28 115
MsG0280007844.01.T01 AT1G54790 26.747 415 211 15 8 356 6 393 1.23e-28 115
MsG0280007844.01.T01 AT1G28660 27.692 390 235 17 7 366 4 376 1.49e-28 115
MsG0280007844.01.T01 AT1G28670 26.804 388 242 16 7 366 4 377 1.61e-28 114
MsG0280007844.01.T01 AT1G53940 30.597 268 174 6 35 297 39 299 3.56e-28 112
MsG0280007844.01.T01 AT1G28640 27.273 374 222 16 20 363 20 373 5.44e-28 113
MsG0280007844.01.T01 AT3G14210 28.863 343 212 13 35 366 36 357 5.73e-28 113
MsG0280007844.01.T01 AT2G27360 29.446 343 197 16 39 352 37 363 7.18e-28 113
MsG0280007844.01.T01 AT1G28580 28.571 343 199 14 39 352 41 366 8.14e-28 113
MsG0280007844.01.T01 AT3G14220 27.401 354 227 13 22 366 19 351 8.84e-28 112
MsG0280007844.01.T01 AT1G54010 26.316 342 216 11 37 366 38 355 1.95e-27 112
MsG0280007844.01.T01 AT1G31550 29.032 341 199 14 39 352 40 364 2.72e-27 111
MsG0280007844.01.T01 AT1G28660 27.692 390 234 18 7 366 4 375 3.52e-27 111
MsG0280007844.01.T01 AT3G48460 27.326 344 211 14 31 352 37 363 1.37e-26 109
MsG0280007844.01.T01 AT5G03610 27.987 318 190 12 37 339 45 338 5.88e-26 107
MsG0280007844.01.T01 AT1G28610 28.205 351 201 15 33 352 29 359 3.79e-25 105
MsG0280007844.01.T01 AT3G09930 29.524 315 190 11 37 339 41 335 6.30e-25 104
MsG0280007844.01.T01 AT3G09930 29.524 315 190 11 37 339 41 335 6.30e-25 104
MsG0280007844.01.T01 AT1G54030 27.170 265 168 8 34 295 51 293 1.70e-24 102
MsG0280007844.01.T01 AT1G28600 29.480 346 191 15 39 352 35 359 5.62e-24 102
MsG0280007844.01.T01 AT5G45910 28.226 372 234 14 6 352 1 364 5.41e-23 99.4
MsG0280007844.01.T01 AT4G01130 26.804 291 171 10 95 353 2 282 5.85e-23 97.8
MsG0280007844.01.T01 AT1G31550 27.353 340 203 14 39 352 40 361 5.98e-23 99.4
MsG0280007844.01.T01 AT4G01130 26.733 303 188 10 12 295 11 298 7.11e-23 98.2
MsG0280007844.01.T01 AT5G03600 27.796 313 197 10 32 338 11 300 7.43e-23 98.2
MsG0280007844.01.T01 AT5G03600 27.532 316 200 10 32 341 46 338 1.13e-22 98.2
MsG0280007844.01.T01 AT1G28590 26.686 341 208 13 39 352 40 365 2.58e-22 97.8
MsG0280007844.01.T01 AT1G54020 25.818 275 181 9 94 366 8 261 1.72e-20 90.9
MsG0280007844.01.T01 AT1G54020 25.818 275 181 9 94 366 8 261 1.72e-20 90.9
MsG0280007844.01.T01 AT1G54020 25.818 275 181 9 94 366 8 261 1.72e-20 90.9
MsG0280007844.01.T01 AT3G62280 29.577 284 159 11 30 295 31 291 3.84e-20 90.1
MsG0280007844.01.T01 AT1G56670 28.044 271 168 9 37 295 42 297 8.84e-20 89.0
MsG0280007844.01.T01 AT1G54020 26.794 209 145 5 160 366 10 212 4.17e-19 85.9
MsG0280007844.01.T01 AT3G14210 29.439 214 138 8 160 366 22 229 2.53e-17 81.3
MsG0280007844.01.T01 AT1G28580 25.753 299 180 12 79 352 4 285 8.49e-17 80.5
MsG0280007844.01.T01 AT1G28570 27.311 238 147 9 129 352 66 291 1.51e-14 74.3
MsG0280007844.01.T01 AT1G53970 44.737 76 39 2 35 107 20 95 6.79e-11 58.9
MsG0280007844.01.T01 AT1G53970 44.737 76 39 2 35 107 20 95 6.79e-11 58.9

Find 67 sgRNAs with CRISPR-Local

Find 162 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACCCTTATGGAATTGATTT+TGG 0.092134 2:-21727584 MsG0280007844.01.T01:CDS
AAGGGTTCATTATTTGTTTA+TGG 0.155661 2:-21725513 MsG0280007844.01.T01:CDS
ACACACTTGTCTCCAGAAAA+TGG 0.189223 2:+21725612 None:intergenic
ATTGCAGAACGTTTATTAAA+TGG 0.214339 2:-21725002 MsG0280007844.01.T01:CDS
ATCGATCCAAGTATATTTAT+TGG 0.215394 2:-21725061 MsG0280007844.01.T01:CDS
GAAGATATCATTAGCAAAAT+TGG 0.215499 2:-21726022 MsG0280007844.01.T01:CDS
TACTTGTCTCCTAATGCTTA+TGG 0.219625 2:-21727182 MsG0280007844.01.T01:CDS
AATAATTGAGCTAGGTGATT+AGG 0.265635 2:+21725582 None:intergenic
CCTCAACAAGGTTCTTCAAT+TGG 0.274013 2:+21725553 None:intergenic
TGGAGATGCTTACCACATTA+TGG 0.280362 2:-21725493 MsG0280007844.01.T01:CDS
GTGGTAAATGTTGGTCCTAT+TGG 0.311602 2:-21725663 MsG0280007844.01.T01:CDS
AAAGCAAATCATCACCCTTA+TGG 0.315459 2:-21727596 MsG0280007844.01.T01:CDS
AGAACCGTTGTTGATGTTAT+AGG 0.319449 2:-21727533 MsG0280007844.01.T01:intron
ATAATTGAGCTAGGTGATTA+GGG 0.322500 2:+21725583 None:intergenic
TGGTAAATGTTGGTCCTATT+GGG 0.322655 2:-21725662 MsG0280007844.01.T01:CDS
AAGAGTTGCCAAACATTTGT+AGG 0.332790 2:+21724960 None:intergenic
GAGCTAGGTGATTAGGGAAT+TGG 0.335306 2:+21725589 None:intergenic
ATGATGAATTACAGTAAATA+TGG 0.342390 2:-21725462 MsG0280007844.01.T01:intron
TCGATCCAAGTATATTTATT+GGG 0.354002 2:-21725060 MsG0280007844.01.T01:CDS
CTCAACAAGGTTCTTCAATT+GGG 0.373272 2:+21725554 None:intergenic
TCTCTCTTCACAGTAGCATT+TGG 0.375070 2:-21725968 MsG0280007844.01.T01:CDS
TGTCACCTAGTTGGTCGATT+TGG 0.384428 2:-21725125 MsG0280007844.01.T01:CDS
TTTCCAAAATCAATTCCATA+AGG 0.403249 2:+21727581 None:intergenic
TTCCAAAATCAATTCCATAA+GGG 0.412375 2:+21727582 None:intergenic
ATGTTTCACCTACAAATGTT+TGG 0.416903 2:-21724968 MsG0280007844.01.T01:CDS
ATGATGGTCACAAATGATTC+TGG 0.426170 2:+21725878 None:intergenic
CACCTAGTTGGTCGATTTGG+AGG 0.427520 2:-21725122 MsG0280007844.01.T01:CDS
TGAACTATAAGAGCAACAAC+TGG 0.432737 2:-21727225 MsG0280007844.01.T01:intron
CACACTTGTCTCCAGAAAAT+GGG 0.435694 2:+21725613 None:intergenic
CTTGATAACTATTTGGCACC+TGG 0.437197 2:-21725932 MsG0280007844.01.T01:CDS
GCATAAAATTTCCTCTCCAA+TGG 0.437807 2:-21727783 MsG0280007844.01.T01:exon
AGAACCTTGTTGAGGAATTG+AGG 0.451494 2:-21725545 MsG0280007844.01.T01:CDS
ATAAGGGTGATGATTTGCTT+TGG 0.452435 2:+21727598 None:intergenic
AATTATGCTTCTGCTGCAGC+TGG 0.452909 2:-21727137 MsG0280007844.01.T01:CDS
GGAATTGAGGACAAATTTGA+AGG 0.455369 2:-21725532 MsG0280007844.01.T01:CDS
ATCATCGATCCATAAGCATT+AGG 0.468420 2:+21727173 None:intergenic
CATAAAATTTCCTCTCCAAT+GGG 0.469528 2:-21727782 MsG0280007844.01.T01:exon
ATACATGGTATACACCCAAT+AGG 0.480201 2:+21725648 None:intergenic
TAATTGCCACTCTGGAATTG+AGG 0.482479 2:+21725907 None:intergenic
AATTGCCACTCTGGAATTGA+GGG 0.484983 2:+21725908 None:intergenic
TCTGCATGTTGTCACCTAGT+TGG 0.496655 2:-21725134 MsG0280007844.01.T01:CDS
AGTATCCCAATAAATATACT+TGG 0.499989 2:+21725055 None:intergenic
GGGTGTTAAATAATTGAGCT+AGG 0.500038 2:+21725574 None:intergenic
TATGGATCGATGATTCTAAA+GGG 0.502817 2:-21727164 MsG0280007844.01.T01:CDS
GGTGATTCTTTGCTCGATGT+AGG 0.509930 2:-21727647 MsG0280007844.01.T01:CDS
TTATGGATCGATGATTCTAA+AGG 0.518381 2:-21727165 MsG0280007844.01.T01:CDS
CTCAAATTATAAAGACCCAT+TGG 0.521109 2:+21727767 None:intergenic
CACTCTGGAATTGAGGGACC+AGG 0.530750 2:+21725914 None:intergenic
TTGCAGCGGTTATTCACTCT+AGG 0.535321 2:-21725702 MsG0280007844.01.T01:intron
GGAGACAATAATTGCCACTC+TGG 0.560416 2:+21725899 None:intergenic
ATAACATTGGCAGCATCACT+AGG 0.560734 2:+21725026 None:intergenic
AAAATTGTTGTGGTAAATGT+TGG 0.566046 2:-21725672 MsG0280007844.01.T01:CDS
GGGTTTAAATCTCTCATACA+TGG 0.580780 2:+21725633 None:intergenic
TAAGCATTAGGAGACAAGTA+AGG 0.583422 2:+21727185 None:intergenic
TCATGATATCTTCCATAATG+TGG 0.590694 2:+21725481 None:intergenic
GAATTGAGGACAAATTTGAA+GGG 0.595549 2:-21725531 MsG0280007844.01.T01:CDS
TTGTCCTCAATTCCTCAACA+AGG 0.598318 2:+21725541 None:intergenic
AGCCTCCAAATCGACCAACT+AGG 0.621062 2:+21725120 None:intergenic
TCTGAATGTTGATATCATGA+TGG 0.622808 2:+21725862 None:intergenic
CCAATTGAAGAACCTTGTTG+AGG 0.628282 2:-21725553 MsG0280007844.01.T01:CDS
GCTGGAATTCTCAATTACAC+TGG 0.641243 2:-21727119 MsG0280007844.01.T01:CDS
GCATTAGGAGACAAGTAAGG+AGG 0.648380 2:+21727188 None:intergenic
GAACTATAAGAGCAACAACT+GGG 0.648398 2:-21727224 MsG0280007844.01.T01:intron
ATTATAAAGACCCATTGGAG+AGG 0.658225 2:+21727772 None:intergenic
ACGTTCTGCAATGATAACAT+TGG 0.669402 2:+21725013 None:intergenic
CTTACCTATAACATCAACAA+CGG 0.672230 2:+21727529 None:intergenic
CTGGTCCCTCAATTCCAGAG+TGG 0.723486 2:-21725913 MsG0280007844.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTATTAAAAAACAAATTGT+TGG + Chr2:21726232-21726251 None:intergenic 10.0%
!!! ATAATAATTACTTTTTTTGT+TGG + Chr2:21725822-21725841 None:intergenic 10.0%
!!! ATTTGTTTTTTAATAAACTT+TGG - Chr2:21726235-21726254 MsG0280007844.01.T01:intron 10.0%
!!! TATATATTTTAATGTGTAAT+AGG - Chr2:21727452-21727471 MsG0280007844.01.T01:intron 10.0%
!! ATAAAAAAAATTATTCTACC+AGG + Chr2:21727264-21727283 None:intergenic 15.0%
!! ATAAGATAAGATAATGAAAA+TGG + Chr2:21725136-21725155 None:intergenic 15.0%
!! TAAAAAAAATTATTCTACCA+GGG + Chr2:21727263-21727282 None:intergenic 15.0%
!! TATAATGCTTAAATTGAAAA+AGG + Chr2:21725701-21725720 None:intergenic 15.0%
!! TTACAATAATGATAAAAAAG+AGG - Chr2:21725631-21725650 MsG0280007844.01.T01:CDS 15.0%
!! TTCAATACAATTCATTATAT+TGG + Chr2:21726347-21726366 None:intergenic 15.0%
!!! AAATTTTATGCCAAAAAAAT+AGG + Chr2:21724833-21724852 None:intergenic 15.0%
!!! ATTGATTTAACAATTTTTTG+AGG + Chr2:21725740-21725759 None:intergenic 15.0%
!!! CTTATCTTATGTTTATTTTT+AGG - Chr2:21725151-21725170 MsG0280007844.01.T01:CDS 15.0%
!!! TTCATAGTTTTTACTTTTTA+GGG - Chr2:21725341-21725360 MsG0280007844.01.T01:intron 15.0%
!! AAACAGAGAAAAAATTGTTT+GGG - Chr2:21727801-21727820 MsG0280007844.01.T01:five_prime_UTR 20.0%
!! AAGAATGCAAAATTATAAGT+AGG + Chr2:21725763-21725782 None:intergenic 20.0%
!! ATGATGAATTACAGTAAATA+TGG - Chr2:21727163-21727182 MsG0280007844.01.T01:CDS 20.0%
!!! CTTCATAGTTTTTACTTTTT+AGG - Chr2:21725340-21725359 MsG0280007844.01.T01:intron 20.0%
!!! GAATATTCTTTAAAGCTTTT+TGG - Chr2:21727741-21727760 MsG0280007844.01.T01:CDS 20.0%
!!! TCATTTTTGAGAATATGTTT+AGG - Chr2:21724889-21724908 MsG0280007844.01.T01:three_prime_UTR 20.0%
!!! TGAAATTTTTATGACTGATT+GGG - Chr2:21727715-21727734 MsG0280007844.01.T01:CDS 20.0%
!!! TTCATATATTCAAGTTTTCT+AGG + Chr2:21726817-21726836 None:intergenic 20.0%
!!! TTGAAATTTTTATGACTGAT+TGG - Chr2:21727714-21727733 MsG0280007844.01.T01:CDS 20.0%
! AAAATTGTTGTGGTAAATGT+TGG - Chr2:21726953-21726972 MsG0280007844.01.T01:intron 25.0%
! AAAGTAAAAACTATGAAGCA+CGG + Chr2:21725338-21725357 None:intergenic 25.0%
! AACTAGACAACAAAAAAACA+AGG + Chr2:21725559-21725578 None:intergenic 25.0%
! AAGAGAAAATTAGTTGTAGA+AGG + Chr2:21726430-21726449 None:intergenic 25.0%
! AAGGGTTCATTATTTGTTTA+TGG - Chr2:21727112-21727131 MsG0280007844.01.T01:CDS 25.0%
! AATCTACATAGACAAAAGAA+AGG + Chr2:21727214-21727233 None:intergenic 25.0%
! AGTATCCCAATAAATATACT+TGG + Chr2:21727573-21727592 None:intergenic 25.0%
! AGTTCCAAGTTCAATTATTA+GGG - Chr2:21725575-21725594 MsG0280007844.01.T01:CDS 25.0%
! ATCGATCCAAGTATATTTAT+TGG - Chr2:21727564-21727583 MsG0280007844.01.T01:CDS 25.0%
! ATTATTACAACTATTTGCAG+CGG - Chr2:21726909-21726928 MsG0280007844.01.T01:intron 25.0%
! ATTCAAATCCTCTAAATACA+TGG - Chr2:21726499-21726518 MsG0280007844.01.T01:intron 25.0%
! ATTGCAGAACGTTTATTAAA+TGG - Chr2:21727623-21727642 MsG0280007844.01.T01:CDS 25.0%
! CTCACATTTACTTATACATA+TGG - Chr2:21725665-21725684 MsG0280007844.01.T01:CDS 25.0%
! GAAACAGAGAAAAAATTGTT+TGG - Chr2:21727800-21727819 MsG0280007844.01.T01:five_prime_UTR 25.0%
! GAAGATATCATTAGCAAAAT+TGG - Chr2:21726603-21726622 MsG0280007844.01.T01:intron 25.0%
! GAATTACAGTAAATATGGTA+GGG - Chr2:21727168-21727187 MsG0280007844.01.T01:CDS 25.0%
! GTATATAAGTTTCACACTAA+GGG - Chr2:21726157-21726176 MsG0280007844.01.T01:intron 25.0%
! TAGTTCCAAGTTCAATTATT+AGG - Chr2:21725574-21725593 MsG0280007844.01.T01:CDS 25.0%
! TCATTATATTGGTGAAAATG+TGG + Chr2:21726336-21726355 None:intergenic 25.0%
! TCGATCCAAGTATATTTATT+GGG - Chr2:21727565-21727584 MsG0280007844.01.T01:CDS 25.0%
! TGAATCTTCATGTGATTAAT+AGG - Chr2:21726530-21726549 MsG0280007844.01.T01:intron 25.0%
! TGAATTACAGTAAATATGGT+AGG - Chr2:21727167-21727186 MsG0280007844.01.T01:CDS 25.0%
! TGTACAATATCTTCAAAATG+TGG - Chr2:21725861-21725880 MsG0280007844.01.T01:CDS 25.0%
! TTCCAAAATCAATTCCATAA+GGG + Chr2:21725046-21725065 None:intergenic 25.0%
! TTTCCAAAATCAATTCCATA+AGG + Chr2:21725047-21725066 None:intergenic 25.0%
!! AAATGTGGATTAATTTCTTG+AGG - Chr2:21725876-21725895 MsG0280007844.01.T01:CDS 25.0%
!! AAATTTTTATGACTGATTGG+GGG - Chr2:21727717-21727736 MsG0280007844.01.T01:CDS 25.0%
!! ATTTACCACAACAATTTTTC+TGG + Chr2:21726951-21726970 None:intergenic 25.0%
!! GAAATTTTTATGACTGATTG+GGG - Chr2:21727716-21727735 MsG0280007844.01.T01:CDS 25.0%
!!! CGATTTTCTTGATAACTATT+TGG - Chr2:21726686-21726705 MsG0280007844.01.T01:intron 25.0%
!!! CTAGGTTTTTAGCAAAATTA+CGG + Chr2:21726799-21726818 None:intergenic 25.0%
AATAATTGAGCTAGGTGATT+AGG + Chr2:21727046-21727065 None:intergenic 30.0%
ACAACAAAAAAACAAGGTGT+AGG + Chr2:21725553-21725572 None:intergenic 30.0%
AGGAATGTTTAACAATGATG+TGG - Chr2:21725896-21725915 MsG0280007844.01.T01:CDS 30.0%
ATAATTGAGCTAGGTGATTA+GGG + Chr2:21727045-21727064 None:intergenic 30.0%
ATGTTTCACCTACAAATGTT+TGG - Chr2:21727657-21727676 MsG0280007844.01.T01:CDS 30.0%
ATTTGTCTCAAAGATGAGAA+TGG - Chr2:21725989-21726008 MsG0280007844.01.T01:CDS 30.0%
CATAAAATTTCCTCTCCAAT+GGG - Chr2:21724843-21724862 MsG0280007844.01.T01:three_prime_UTR 30.0%
CTCAAATTATAAAGACCCAT+TGG + Chr2:21724861-21724880 None:intergenic 30.0%
CTTACCTATAACATCAACAA+CGG + Chr2:21725099-21725118 None:intergenic 30.0%
GAATTGAGGACAAATTTGAA+GGG - Chr2:21727094-21727113 MsG0280007844.01.T01:intron 30.0%
GGTATATAAGTTTCACACTA+AGG - Chr2:21726156-21726175 MsG0280007844.01.T01:intron 30.0%
TACTATGAGACAAGAAAATG+AGG - Chr2:21726267-21726286 MsG0280007844.01.T01:intron 30.0%
TATGGATCGATGATTCTAAA+GGG - Chr2:21725461-21725480 MsG0280007844.01.T01:intron 30.0%
TCATGATATCTTCCATAATG+TGG + Chr2:21727147-21727166 None:intergenic 30.0%
TCATGTTACCATGTATTTAG+AGG + Chr2:21726510-21726529 None:intergenic 30.0%
TCTGAATGTTGATATCATGA+TGG + Chr2:21726766-21726785 None:intergenic 30.0%
TCTTCATGTGATTAATAGGT+TGG - Chr2:21726534-21726553 MsG0280007844.01.T01:intron 30.0%
TTATGGATCGATGATTCTAA+AGG - Chr2:21725460-21725479 MsG0280007844.01.T01:intron 30.0%
TTCAGTGTAATTACAAGTGT+CGG - Chr2:21725249-21725268 MsG0280007844.01.T01:intron 30.0%
! AATTTTTATGACTGATTGGG+GGG - Chr2:21727718-21727737 MsG0280007844.01.T01:CDS 30.0%
! ACTTTTGAATAACGATCACA+TGG + Chr2:21727536-21727555 None:intergenic 30.0%
! AGAGATTTAAACCCATTTTC+TGG - Chr2:21727001-21727020 MsG0280007844.01.T01:intron 30.0%
!! ATCCAAGCTTCATTTGTTTT+TGG - Chr2:21724957-21724976 MsG0280007844.01.T01:CDS 30.0%
AAAGCAAATCATCACCCTTA+TGG - Chr2:21725029-21725048 MsG0280007844.01.T01:CDS 35.0%
AAGAGTTGCCAAACATTTGT+AGG + Chr2:21727668-21727687 None:intergenic 35.0%
ACGTTCTGCAATGATAACAT+TGG + Chr2:21727615-21727634 None:intergenic 35.0%
AGAACCGTTGTTGATGTTAT+AGG - Chr2:21725092-21725111 MsG0280007844.01.T01:CDS 35.0%
ATACATGGTATACACCCAAT+AGG + Chr2:21726980-21726999 None:intergenic 35.0%
ATCATCGATCCATAAGCATT+AGG + Chr2:21725455-21725474 None:intergenic 35.0%
ATGATACAACATCAAACGAC+GGG - Chr2:21725920-21725939 MsG0280007844.01.T01:CDS 35.0%
ATGATGGTCACAAATGATTC+TGG + Chr2:21726750-21726769 None:intergenic 35.0%
ATTATAAAGACCCATTGGAG+AGG + Chr2:21724856-21724875 None:intergenic 35.0%
ATTCGAAGTCTACATTCGTA+AGG + Chr2:21726120-21726139 None:intergenic 35.0%
ATTGATTAACTGTTATGCCC+TGG - Chr2:21727243-21727262 MsG0280007844.01.T01:intron 35.0%
CACCAAAAACAAATGAAGCT+TGG + Chr2:21724962-21724981 None:intergenic 35.0%
CATGATACAACATCAAACGA+CGG - Chr2:21725919-21725938 MsG0280007844.01.T01:CDS 35.0%
CGAATTAGATTCGAAGAATG+TGG - Chr2:21726135-21726154 MsG0280007844.01.T01:intron 35.0%
CTCAACAAGGTTCTTCAATT+GGG + Chr2:21727074-21727093 None:intergenic 35.0%
GAACTATAAGAGCAACAACT+GGG - Chr2:21725401-21725420 MsG0280007844.01.T01:intron 35.0%
GATGCCCTAATAATTGAACT+TGG + Chr2:21725582-21725601 None:intergenic 35.0%
GCATAAAATTTCCTCTCCAA+TGG - Chr2:21724842-21724861 MsG0280007844.01.T01:three_prime_UTR 35.0%
GGAATTGAGGACAAATTTGA+AGG - Chr2:21727093-21727112 MsG0280007844.01.T01:intron 35.0%
GGGTGTTAAATAATTGAGCT+AGG + Chr2:21727054-21727073 None:intergenic 35.0%
GGGTTTAAATCTCTCATACA+TGG + Chr2:21726995-21727014 None:intergenic 35.0%
GTGGAAACTAACTTTAGATG+TGG + Chr2:21726317-21726336 None:intergenic 35.0%
TAAGCATTAGGAGACAAGTA+AGG + Chr2:21725443-21725462 None:intergenic 35.0%
TACTTGTCTCCTAATGCTTA+TGG - Chr2:21725443-21725462 MsG0280007844.01.T01:intron 35.0%
TGAACTATAAGAGCAACAAC+TGG - Chr2:21725400-21725419 MsG0280007844.01.T01:intron 35.0%
TGGTAAATGTTGGTCCTATT+GGG - Chr2:21726963-21726982 MsG0280007844.01.T01:intron 35.0%
! ATTTTTATGACTGATTGGGG+GGG - Chr2:21727719-21727738 MsG0280007844.01.T01:CDS 35.0%
! TAGGGCATCAAAATTCAACT+AGG - Chr2:21725593-21725612 MsG0280007844.01.T01:CDS 35.0%
!! ATAAGGGTGATGATTTGCTT+TGG + Chr2:21725030-21725049 None:intergenic 35.0%
!! ATTGATTTTGGAAAACCCAC+AGG - Chr2:21725053-21725072 MsG0280007844.01.T01:CDS 35.0%
!! CACCCTTATGGAATTGATTT+TGG - Chr2:21725041-21725060 MsG0280007844.01.T01:CDS 35.0%
!!! TATGCCGACTTTATTTTGTG+CGG + Chr2:21725966-21725985 None:intergenic 35.0%
ACACACTTGTCTCCAGAAAA+TGG + Chr2:21727016-21727035 None:intergenic 40.0%
AGAACCTTGTTGAGGAATTG+AGG - Chr2:21727080-21727099 MsG0280007844.01.T01:intron 40.0%
AGGAGCCAGAAAAATTGTTG+TGG - Chr2:21726943-21726962 MsG0280007844.01.T01:intron 40.0%
ATAACATTGGCAGCATCACT+AGG + Chr2:21727602-21727621 None:intergenic 40.0%
CACACTTGTCTCCAGAAAAT+GGG + Chr2:21727015-21727034 None:intergenic 40.0%
CACTAAGGGAGAAGATTTCT+TGG - Chr2:21726171-21726190 MsG0280007844.01.T01:intron 40.0%
CCAATTGAAGAACCTTGTTG+AGG - Chr2:21727072-21727091 MsG0280007844.01.T01:intron 40.0%
CCATTACAAAAACGACCTGT+GGG + Chr2:21725071-21725090 None:intergenic 40.0%
CCTCAACAAGGTTCTTCAAT+TGG + Chr2:21727075-21727094 None:intergenic 40.0%
GCACAAAATAAAGTCGGCAT+AGG - Chr2:21725965-21725984 MsG0280007844.01.T01:CDS 40.0%
GCTGGAATTCTCAATTACAC+TGG - Chr2:21725506-21725525 MsG0280007844.01.T01:CDS 40.0%
GGATGCCTTAACTAAAGTGT+GGG + Chr2:21726296-21726315 None:intergenic 40.0%
GGTTTCCCACACTTTAGTTA+AGG - Chr2:21726288-21726307 MsG0280007844.01.T01:intron 40.0%
GTGGTAAATGTTGGTCCTAT+TGG - Chr2:21726962-21726981 MsG0280007844.01.T01:intron 40.0%
GTTGACACAAGTGAAGCTAT+TGG - Chr2:21726058-21726077 MsG0280007844.01.T01:CDS 40.0%
GTTGCATGATGCAACAATTG+TGG + Chr2:21726468-21726487 None:intergenic 40.0%
TAGGCTATGAAGCACAGATA+CGG - Chr2:21725170-21725189 MsG0280007844.01.T01:intron 40.0%
TCCATTACAAAAACGACCTG+TGG + Chr2:21725072-21725091 None:intergenic 40.0%
TCTCTCTTCACAGTAGCATT+TGG - Chr2:21726657-21726676 MsG0280007844.01.T01:intron 40.0%
TGGAGATGCTTACCACATTA+TGG - Chr2:21727132-21727151 MsG0280007844.01.T01:CDS 40.0%
TGGATGCCTTAACTAAAGTG+TGG + Chr2:21726297-21726316 None:intergenic 40.0%
TTGGTATACTTCGACAGACT+TGG + Chr2:21726213-21726232 None:intergenic 40.0%
TTGTCCTCAATTCCTCAACA+AGG + Chr2:21727087-21727106 None:intergenic 40.0%
! CTTGATAACTATTTGGCACC+TGG - Chr2:21726693-21726712 MsG0280007844.01.T01:intron 40.0%
!! AATTGCCACTCTGGAATTGA+GGG + Chr2:21726720-21726739 None:intergenic 40.0%
!! TAATTGCCACTCTGGAATTG+AGG + Chr2:21726721-21726740 None:intergenic 40.0%
!!! ATGCCGACTTTATTTTGTGC+GGG + Chr2:21725965-21725984 None:intergenic 40.0%
AATTATGCTTCTGCTGCAGC+TGG - Chr2:21725488-21725507 MsG0280007844.01.T01:CDS 45.0%
ACACGACACATGTCCAACAT+CGG - Chr2:21725289-21725308 MsG0280007844.01.T01:intron 45.0%
GAGCTAGGTGATTAGGGAAT+TGG + Chr2:21727039-21727058 None:intergenic 45.0%
GCATTAGGAGACAAGTAAGG+AGG + Chr2:21725440-21725459 None:intergenic 45.0%
GGAGACAATAATTGCCACTC+TGG + Chr2:21726729-21726748 None:intergenic 45.0%
GGTGATTCTTTGCTCGATGT+AGG - Chr2:21724978-21724997 MsG0280007844.01.T01:CDS 45.0%
TCCCCCGCACAAAATAAAGT+CGG - Chr2:21725959-21725978 MsG0280007844.01.T01:CDS 45.0%
TCTGCATGTTGTCACCTAGT+TGG - Chr2:21727491-21727510 MsG0280007844.01.T01:intron 45.0%
TGTCACCTAGTTGGTCGATT+TGG - Chr2:21727500-21727519 MsG0280007844.01.T01:intron 45.0%
TTGCAGCGGTTATTCACTCT+AGG - Chr2:21726923-21726942 MsG0280007844.01.T01:intron 45.0%
!! TACAAGTGTCGGTGTCATGT+CGG - Chr2:21725260-21725279 MsG0280007844.01.T01:intron 45.0%
!!! ACTTTATTTTGTGCGGGGGA+AGG + Chr2:21725959-21725978 None:intergenic 45.0%
!!! CCCACAGGTCGTTTTTGTAA+TGG - Chr2:21725068-21725087 MsG0280007844.01.T01:CDS 45.0%
!!! CTTTATTTTGTGCGGGGGAA+GGG + Chr2:21725958-21725977 None:intergenic 45.0%
!!! TGCCGACTTTATTTTGTGCG+GGG + Chr2:21725964-21725983 None:intergenic 45.0%
AGCCTCCAAATCGACCAACT+AGG + Chr2:21727508-21727527 None:intergenic 50.0%
ATCGGGACACGCATAATCTG+AGG - Chr2:21725307-21725326 MsG0280007844.01.T01:intron 50.0%
CAACATCAAACGACGGGACA+TGG - Chr2:21725926-21725945 MsG0280007844.01.T01:CDS 50.0%
CACGACACATGTCCAACATC+GGG - Chr2:21725290-21725309 MsG0280007844.01.T01:intron 50.0%
GATTATGCGTGTCCCGATGT+TGG + Chr2:21725305-21725324 None:intergenic 50.0%
!! CACCTAGTTGGTCGATTTGG+AGG - Chr2:21727503-21727522 MsG0280007844.01.T01:intron 50.0%
!!! GCCGACTTTATTTTGTGCGG+GGG + Chr2:21725963-21725982 None:intergenic 50.0%
CTGGTCCCTCAATTCCAGAG+TGG - Chr2:21726712-21726731 MsG0280007844.01.T01:intron 55.0%
GCACAGATACGGACACGACA+AGG - Chr2:21725181-21725200 MsG0280007844.01.T01:intron 55.0%
!! CACTCTGGAATTGAGGGACC+AGG + Chr2:21726714-21726733 None:intergenic 55.0%
!! TGTCGGTGTCATGTCGGTGT+CGG - Chr2:21725266-21725285 MsG0280007844.01.T01:intron 55.0%
Chromosome Type Strat End Strand Name
Chr2 gene 21724826 21727821 21724826 ID=MsG0280007844.01;Name=MsG0280007844.01
Chr2 mRNA 21724826 21727821 21724826 ID=MsG0280007844.01.T01;Parent=MsG0280007844.01;Name=MsG0280007844.01.T01;_AED=0.46;_eAED=0.46;_QI=35|1|1|1|0.75|0.8|5|124|368
Chr2 exon 21724826 21725173 21724826 ID=MsG0280007844.01.T01:exon:40173;Parent=MsG0280007844.01.T01
Chr2 exon 21725463 21725718 21725463 ID=MsG0280007844.01.T01:exon:40172;Parent=MsG0280007844.01.T01
Chr2 exon 21725850 21726095 21725850 ID=MsG0280007844.01.T01:exon:40171;Parent=MsG0280007844.01.T01
Chr2 exon 21727109 21727236 21727109 ID=MsG0280007844.01.T01:exon:40170;Parent=MsG0280007844.01.T01
Chr2 exon 21727534 21727821 21727534 ID=MsG0280007844.01.T01:exon:40169;Parent=MsG0280007844.01.T01
Chr2 five_prime_UTR 21727787 21727821 21727787 ID=MsG0280007844.01.T01:five_prime_utr;Parent=MsG0280007844.01.T01
Chr2 CDS 21727534 21727786 21727534 ID=MsG0280007844.01.T01:cds;Parent=MsG0280007844.01.T01
Chr2 CDS 21727109 21727236 21727109 ID=MsG0280007844.01.T01:cds;Parent=MsG0280007844.01.T01
Chr2 CDS 21725850 21726095 21725850 ID=MsG0280007844.01.T01:cds;Parent=MsG0280007844.01.T01
Chr2 CDS 21725463 21725718 21725463 ID=MsG0280007844.01.T01:cds;Parent=MsG0280007844.01.T01
Chr2 CDS 21724950 21725173 21724950 ID=MsG0280007844.01.T01:cds;Parent=MsG0280007844.01.T01
Chr2 three_prime_UTR 21724826 21724949 21724826 ID=MsG0280007844.01.T01:three_prime_utr;Parent=MsG0280007844.01.T01
Gene Sequence

>MsG0280007844.01.T01

ATGGGTCTTTATAATTTGAGCATAAAACTCATTTTTGAGAATATGTTTAGGATTTTAACGTTATTGCTCTCTTTCAAATTTAGCTTATCAAATAAAATCCAAGCTTCATTTGTTTTTGGTGATTCTTTGCTCGATGTAGGAAATAACAATTACATCACTTCACTTGCCAAAGCAAATCATCACCCTTATGGAATTGATTTTGGAAAACCCACAGGTCGTTTTTGTAATGGAAGAACCGTTGTTGATGTTATAGAGCAACAACTGGGTCTTGATTATACTCCTCCTTACTTGTCTCCTAATGCTTATGGATCGATGATTCTAAAGGGTGTCAATTATGCTTCTGCTGCAGCTGGAATTCTCAATTACACTGGTCACATTTTTGTTGGTCGAATCAACTTTGATGCACAAATTGATAACTTTGCAAATACAAGAGAAGATATCATTAGCAAAATTGGTGTTCGTGCAGCTCTCAAATTGCTTAAGAATTCTCTCTTCACAGTAGCATTTGGCTCAAACGATTTTCTTGATAACTATTTGGCACCTGGTCCCTCAATTCCAGAGTGGCAATTATTGTCTCCAGAATCATTTGTGACCATCATGATATCAACATTCAGAGTACAAATAACCCGGTTATTCACTCTAGGAGCCAGAAAAATTGTTGTGGTAAATGTTGGTCCTATTGGGTGTATACCATGTATGAGAGATTTAAACCCATTTTCTGGAGACAAGTGTGTCCAATTCCCTAATCACCTAGCTCAATTATTTAACACCCAATTGAAGAACCTTGTTGAGGAATTGAGGACAAATTTGAAGGGTTCATTATTTGTTTATGGAGATGCTTACCACATTATGGAAGATATCATGATGAATTACAGTAAATATGGTTTCAAGAATACAAATTCTGCATGTTGTCACCTAGTTGGTCGATTTGGAGGCTTAATTCCATGTGATCGTTATTCAAAAGTTTGTGAAGATCGATCCAAGTATATTTATTGGGATACTTTTCATCCTAGTGATGCTGCCAATGTTATCATTGCAGAACGTTTATTAAATGGTGATGCTAATGATGTTTCACCTACAAATGTTTGGCAACTCTTGAAAGCTTGA

Protein sequence

>MsG0280007844.01.T01

MGLYNLSIKLIFENMFRILTLLLSFKFSLSNKIQASFVFGDSLLDVGNNNYITSLAKANHHPYGIDFGKPTGRFCNGRTVVDVIEQQLGLDYTPPYLSPNAYGSMILKGVNYASAAAGILNYTGHIFVGRINFDAQIDNFANTREDIISKIGVRAALKLLKNSLFTVAFGSNDFLDNYLAPGPSIPEWQLLSPESFVTIMISTFRVQITRLFTLGARKIVVVNVGPIGCIPCMRDLNPFSGDKCVQFPNHLAQLFNTQLKNLVEELRTNLKGSLFVYGDAYHIMEDIMMNYSKYGFKNTNSACCHLVGRFGGLIPCDRYSKVCEDRSKYIYWDTFHPSDAANVIIAERLLNGDANDVSPTNVWQLLKA*