AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480021317.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021317.01.T01 MTR_4g071465 98.339 301 5 0 15 315 243 543 0.0 598
MsG0480021317.01.T01 MTR_4g071445 91.234 308 27 0 8 315 241 548 0.0 564
MsG0480021317.01.T01 MTR_4g071420 83.388 307 51 0 8 314 244 550 0.0 530
MsG0480021317.01.T01 MTR_4g071370 79.402 301 62 0 15 315 250 550 5.41e-172 488
MsG0480021317.01.T01 MTR_4g071390 78.472 288 61 1 15 302 237 523 1.62e-159 456
MsG0480021317.01.T01 MTR_4g071370 79.018 224 47 0 15 238 250 473 2.93e-125 367
MsG0480021317.01.T01 MTR_4g071370 79.899 199 40 0 15 213 250 448 9.50e-111 329
MsG0480021317.01.T01 MTR_4g071420 82.099 162 29 0 8 169 244 405 1.14e-91 280
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021317.01.T01 AT2G21340 66.667 309 101 2 8 315 252 559 7.86e-148 427
MsG0480021317.01.T01 AT2G21340 66.667 309 101 2 8 315 249 556 1.08e-147 427
MsG0480021317.01.T01 AT4G39030 58.974 312 119 2 8 314 235 542 2.39e-126 372
MsG0480021317.01.T01 AT2G38330 27.599 279 198 4 19 297 234 508 2.13e-12 68.2

Find 106 sgRNAs with CRISPR-Local

Find 282 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGTTCTCGTTCTTGGAATT+TGG 0.118992 4:-56650323 MsG0480021317.01.T01:three_prime_UTR
TTTGAATGGTCTAGTATTAT+TGG 0.209178 4:-56650982 MsG0480021317.01.T01:intron
TATCATTTAATTCATATTAT+TGG 0.218061 4:-56653702 MsG0480021317.01.T01:CDS
TACTCTCCTCTATTTCTAAA+TGG 0.226180 4:+56650349 None:intergenic
GCAAACCATATCTGCTAAAT+AGG 0.237565 4:+56650873 None:intergenic
AGTAAATATGTTCTCGTTCT+TGG 0.242038 4:-56650330 MsG0480021317.01.T01:three_prime_UTR
CTTAATGTCGATACAATTCT+TGG 0.244097 4:-56650529 MsG0480021317.01.T01:three_prime_UTR
ACTGCTGCCAGTATTATAAA+TGG 0.247426 4:-56653618 MsG0480021317.01.T01:CDS
ATTTGTGACATTGATGTTAA+AGG 0.250101 4:-56653121 MsG0480021317.01.T01:intron
CTAAGGTCTCTTCTAACTAT+TGG 0.258425 4:-56652474 MsG0480021317.01.T01:CDS
CAGATCCTATTTAGCAGATA+TGG 0.263940 4:-56650878 MsG0480021317.01.T01:CDS
ATCAATGGGTACAAATAAAA+TGG 0.278415 4:-56652979 MsG0480021317.01.T01:CDS
ATGGGATTGCTGGGGCTGCA+TGG 0.278670 4:-56653560 MsG0480021317.01.T01:CDS
TGCCACTGGGTATAGTTATT+TGG 0.282587 4:-56650401 MsG0480021317.01.T01:three_prime_UTR
ACCAATTCCATTTATAATAC+TGG 0.285900 4:+56653611 None:intergenic
TGTTCTCGTTCTTGGAATTT+GGG 0.288693 4:-56650322 MsG0480021317.01.T01:three_prime_UTR
GGAGTTCCATTTATAGTTCA+TGG 0.296507 4:-56650626 MsG0480021317.01.T01:three_prime_UTR
GTCTTGGTATGAAGGATTCT+TGG 0.321480 4:-56653659 MsG0480021317.01.T01:CDS
TTTGCCTTCACCATTCCTTC+AGG 0.327061 4:-56653183 MsG0480021317.01.T01:CDS
AATGTACCATGAACTATAAA+TGG 0.328094 4:+56650620 None:intergenic
CATAAATGATTGAGCAGTTT+GGG 0.328411 4:+56652791 None:intergenic
TACTTAGGCTATGGGATTGC+TGG 0.328970 4:-56653570 MsG0480021317.01.T01:CDS
ATCCCTTCTCGTTTAGAGTT+TGG 0.333193 4:+56653214 None:intergenic
CCCTCCAGGCCAACAGTTGC+GGG 0.334192 4:+56652213 None:intergenic
TGGGATTGCTGGGGCTGCAT+GGG 0.346105 4:-56653559 MsG0480021317.01.T01:CDS
TCGGAAACTAAGCGGGGAAA+TGG 0.352075 4:-56650484 MsG0480021317.01.T01:three_prime_UTR
GCATAAATGATTGAGCAGTT+TGG 0.352223 4:+56652790 None:intergenic
TTTCCCTTGCTGGATTTCAA+TGG 0.356634 4:-56650838 MsG0480021317.01.T01:CDS
CGGAAACTAAGCGGGGAAAT+GGG 0.359119 4:-56650483 MsG0480021317.01.T01:three_prime_UTR
AGTTGAAGACTGCATAGTTT+AGG 0.368285 4:-56650647 MsG0480021317.01.T01:exon
CTAACTATTGGAGCTGTACT+CGG 0.380237 4:-56652462 MsG0480021317.01.T01:CDS
GACAGGCTCGGTCGCTTCTA+AGG 0.385164 4:-56652491 MsG0480021317.01.T01:intron
TCTTGGTATGAAGGATTCTT+GGG 0.387786 4:-56653658 MsG0480021317.01.T01:CDS
GGATTCTTGGGGACCCTTGA+AGG 0.393221 4:-56653646 MsG0480021317.01.T01:CDS
TTCATGCAGTCTTGGTATGA+AGG 0.398143 4:-56653667 MsG0480021317.01.T01:CDS
TTCCCTTGCTGGATTTCAAT+GGG 0.401577 4:-56650837 MsG0480021317.01.T01:intron
TGGCCTGGAGGGAACATTGC+TGG 0.407179 4:-56652202 MsG0480021317.01.T01:intron
CACATTCTTTCATGCAGTCT+TGG 0.413655 4:-56653675 MsG0480021317.01.T01:CDS
ACCTGATCAGATGGTTATCC+AGG 0.414172 4:-56652382 MsG0480021317.01.T01:CDS
GCGATCAAGTGTGGTGCCAC+TGG 0.414677 4:-56650415 MsG0480021317.01.T01:three_prime_UTR
GATTGAGCAGTTTGGGATAG+AGG 0.415616 4:+56652798 None:intergenic
AACATCAATGTCACAAATAC+AGG 0.423376 4:+56653126 None:intergenic
GTATGGAGTAAATCGGAGTT+TGG 0.425725 4:-56652757 MsG0480021317.01.T01:CDS
GGCAGCAGTCAAAGCCTTCA+AGG 0.438571 4:+56653632 None:intergenic
GCCAGTATTATAAATGGAAT+TGG 0.442168 4:-56653612 MsG0480021317.01.T01:CDS
TGGGGCTGCATGGGCTACAT+TGG 0.444208 4:-56653550 MsG0480021317.01.T01:CDS
TCCCTCCAGGCCAACAGTTG+CGG 0.444843 4:+56652212 None:intergenic
CTGTGCAGATACTTAGGCTA+TGG 0.449705 4:-56653579 MsG0480021317.01.T01:CDS
GCTTTGCCATTTAGAAATAG+AGG 0.450678 4:-56650355 MsG0480021317.01.T01:three_prime_UTR
TTTATAAGCTTGTCAATGAC+TGG 0.456026 4:-56651014 MsG0480021317.01.T01:CDS
CACACCCGCAACTGTTGGCC+TGG 0.462187 4:-56652217 MsG0480021317.01.T01:CDS
AAGATATATGTTCAAGGCGG+TGG 0.465973 4:+56650441 None:intergenic
CCCGCAACTGTTGGCCTGGA+GGG 0.472789 4:-56652213 MsG0480021317.01.T01:CDS
TTTGCTTATGCAGGCTGGAC+GGG 0.473101 4:-56651045 MsG0480021317.01.T01:intron
TTTATGCCTGAGTTGATGTA+TGG 0.474513 4:-56652774 MsG0480021317.01.T01:CDS
ATAATTCTGTGCAGATACTT+AGG 0.476106 4:-56653585 MsG0480021317.01.T01:CDS
TTGTTGGAACATCTGTTCCT+TGG 0.476393 4:-56652425 MsG0480021317.01.T01:CDS
AAATGCCATTGGGAGATAGA+AGG 0.478517 4:+56650706 None:intergenic
TCCTGGATAACCATCTGATC+AGG 0.491456 4:+56652381 None:intergenic
AGTTGATGTATGGAGTAAAT+CGG 0.492680 4:-56652764 MsG0480021317.01.T01:CDS
CTACCGGTGCTGAGTTGTAT+CGG 0.497831 4:-56650503 MsG0480021317.01.T01:three_prime_UTR
AGTTGTATCGGAAACTAAGC+GGG 0.499067 4:-56650491 MsG0480021317.01.T01:three_prime_UTR
TTGCCTTCACCATTCCTTCA+GGG 0.500207 4:-56653182 MsG0480021317.01.T01:CDS
TTCCGAGTATAAAATGCCAT+TGG 0.504973 4:+56650695 None:intergenic
TCCGAGTATAAAATGCCATT+GGG 0.511889 4:+56650696 None:intergenic
ACTTAGGCTATGGGATTGCT+GGG 0.518480 4:-56653569 MsG0480021317.01.T01:CDS
CTTCACCATTCCTTCAGGGA+AGG 0.523053 4:-56653178 MsG0480021317.01.T01:CDS
TTTAGCAGATATGGTTTGCA+AGG 0.524183 4:-56650869 MsG0480021317.01.T01:CDS
TGGGAGATAGAAGGCGCAGA+AGG 0.526952 4:+56650715 None:intergenic
TAACTATTGGAGCTGTACTC+GGG 0.527379 4:-56652461 MsG0480021317.01.T01:CDS
AGTAAATCGGAGTTTGGTAA+AGG 0.533532 4:-56652751 MsG0480021317.01.T01:intron
GGAAACTAAGCGGGGAAATG+GGG 0.546802 4:-56650482 MsG0480021317.01.T01:three_prime_UTR
CGATCAAGTGTGGTGCCACT+GGG 0.547254 4:-56650414 MsG0480021317.01.T01:three_prime_UTR
TGTGCAGATACTTAGGCTAT+GGG 0.548209 4:-56653578 MsG0480021317.01.T01:CDS
AAGCCACCATAAAAGTAGAA+AGG 0.550147 4:+56650374 None:intergenic
GAATTGTATCGACATTAAGA+TGG 0.552746 4:+56650533 None:intergenic
AAATTCCTTCCCTGAAGGAA+TGG 0.556149 4:+56653173 None:intergenic
ATTTGCTTATGCAGGCTGGA+CGG 0.559004 4:-56651046 MsG0480021317.01.T01:intron
ATGGTCACACCCGCAACTGT+TGG 0.560257 4:-56652222 MsG0480021317.01.T01:CDS
GACAGAAATTCCTTCCCTGA+AGG 0.564886 4:+56653168 None:intergenic
ATACCAGCAATGTTCCCTCC+AGG 0.568305 4:+56652199 None:intergenic
ATACAATTCTTGGAAACTAC+CGG 0.575824 4:-56650519 MsG0480021317.01.T01:three_prime_UTR
ATGGTACATTATACAAATAG+AGG 0.576635 4:-56650607 MsG0480021317.01.T01:three_prime_UTR
GATATGGTTTGCAAGGCTGT+TGG 0.577198 4:-56650862 MsG0480021317.01.T01:CDS
GAGCCAAACTCTAAACGAGA+AGG 0.585139 4:-56653217 MsG0480021317.01.T01:CDS
CTGCGCCTTCTATCTCCCAA+TGG 0.586913 4:-56650711 MsG0480021317.01.T01:CDS
CAAGACTGCATGAAAGAATG+TGG 0.593374 4:+56653676 None:intergenic
GAAACTAAGCGGGGAAATGG+GGG 0.595816 4:-56650481 MsG0480021317.01.T01:three_prime_UTR
CTTCCCTGAAGGAATGGTGA+AGG 0.604960 4:+56653179 None:intergenic
AGCCAAACTCTAAACGAGAA+GGG 0.607954 4:-56653216 MsG0480021317.01.T01:CDS
GCAGCAGTCAAAGCCTTCAA+GGG 0.612094 4:+56653633 None:intergenic
ACCCGCAACTGTTGGCCTGG+AGG 0.612770 4:-56652214 MsG0480021317.01.T01:CDS
TACATGTTATGCACAATATG+TGG 0.612778 4:-56652825 MsG0480021317.01.T01:CDS
GGGAGATAGAAGGCGCAGAA+GGG 0.619859 4:+56650716 None:intergenic
TTTACTCCATACATCAACTC+AGG 0.632825 4:+56652768 None:intergenic
TACCCATTGAAATCCAGCAA+GGG 0.639256 4:+56650835 None:intergenic
CTTAGGCTATGGGATTGCTG+GGG 0.650164 4:-56653568 MsG0480021317.01.T01:CDS
TTTCCGATACAACTCAGCAC+CGG 0.653611 4:+56650500 None:intergenic
CTTGGTATGAAGGATTCTTG+GGG 0.656274 4:-56653657 MsG0480021317.01.T01:CDS
TTACCCATTGAAATCCAGCA+AGG 0.667040 4:+56650834 None:intergenic
AAAATGTAGGGGAATAACCA+AGG 0.670464 4:+56652408 None:intergenic
GAGTTGTATCGGAAACTAAG+CGG 0.674848 4:-56650492 MsG0480021317.01.T01:three_prime_UTR
TGATCAGATGGTTATCCAGG+AGG 0.694479 4:-56652379 MsG0480021317.01.T01:intron
TGACTTGTAAGGTAGGAATG+TGG 0.734667 4:-56650291 MsG0480021317.01.T01:three_prime_UTR
GTTGTATCGGAAACTAAGCG+GGG 0.736927 4:-56650490 MsG0480021317.01.T01:three_prime_UTR
TACCAAATAACTATACCCAG+TGG 0.759548 4:+56650399 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATCATTTAATTCATATTAT+TGG - Chr4:56650226-56650245 MsG0480021317.01.T01:three_prime_UTR 10.0%
!! ACTTATTTATATATTTATCC+AGG - Chr4:56652830-56652849 MsG0480021317.01.T01:CDS 15.0%
!! ATAATAAATGGGAAAAAATA+TGG - Chr4:56652250-56652269 MsG0480021317.01.T01:CDS 15.0%
!! GTTATTAAGTACATTATATA+TGG + Chr4:56652409-56652428 None:intergenic 15.0%
!! TAAAAGATATAAAATTACCA+TGG + Chr4:56651926-56651945 None:intergenic 15.0%
!! TAATTAATCGTATCATATAT+GGG - Chr4:56650605-56650624 MsG0480021317.01.T01:three_prime_UTR 15.0%
!! TGAATATATATAACAATGTA+TGG + Chr4:56651391-56651410 None:intergenic 15.0%
!! TTAATTAATCGTATCATATA+TGG - Chr4:56650604-56650623 MsG0480021317.01.T01:three_prime_UTR 15.0%
!! TTGTATTAAGCTTATTAATT+AGG - Chr4:56650488-56650507 MsG0480021317.01.T01:three_prime_UTR 15.0%
!!! AGTTGAATTTCATTTTATAT+AGG - Chr4:56651283-56651302 MsG0480021317.01.T01:intron 15.0%
!!! ATTTTTATGCTAAAAATCTT+AGG + Chr4:56651852-56651871 None:intergenic 15.0%
!!! GAATTTTCAGTTATATTTAA+AGG + Chr4:56650884-56650903 None:intergenic 15.0%
!!! TTAAAATATGTTTTTGAGTT+TGG + Chr4:56651051-56651070 None:intergenic 15.0%
!!! TTATTTTATTGTTCTTATGT+TGG - Chr4:56651779-56651798 MsG0480021317.01.T01:intron 15.0%
!! ATGTTGTAGATAATGAATTA+GGG - Chr4:56650433-56650452 MsG0480021317.01.T01:three_prime_UTR 20.0%
!! GATTAATTAATTATGATGTG+TGG + Chr4:56650594-56650613 None:intergenic 20.0%
!! TACTACAATATGAATTAGTA+AGG + Chr4:56651360-56651379 None:intergenic 20.0%
!! TATGTTGTAGATAATGAATT+AGG - Chr4:56650432-56650451 MsG0480021317.01.T01:three_prime_UTR 20.0%
!! TCAACTTGTCTATAATAAAT+GGG - Chr4:56652239-56652258 MsG0480021317.01.T01:CDS 20.0%
!! TTCAACTTGTCTATAATAAA+TGG - Chr4:56652238-56652257 MsG0480021317.01.T01:CDS 20.0%
!!! AAGGCATTAATTAGTTATAT+GGG + Chr4:56652710-56652729 None:intergenic 20.0%
!!! ATATATTTTGCTACATCAAT+GGG - Chr4:56650935-56650954 MsG0480021317.01.T01:intron 20.0%
!!! TAAGGCATTAATTAGTTATA+TGG + Chr4:56652711-56652730 None:intergenic 20.0%
!!! TATATATTTTGCTACATCAA+TGG - Chr4:56650934-56650953 MsG0480021317.01.T01:intron 20.0%
!!! TTTAATCCAACTCTTATTTT+AGG - Chr4:56651066-56651085 MsG0480021317.01.T01:intron 20.0%
! AAAAAGATATATGTTCAAGG+CGG + Chr4:56653493-56653512 None:intergenic 25.0%
! AAATGATCATCCTGTATATA+AGG + Chr4:56651243-56651262 None:intergenic 25.0%
! AACTGAAAATTCTGATGTTT+AGG - Chr4:56650892-56650911 MsG0480021317.01.T01:intron 25.0%
! AATGTACCATGAACTATAAA+TGG + Chr4:56653311-56653330 None:intergenic 25.0%
! ACCAATTCCATTTATAATAC+TGG + Chr4:56650320-56650339 None:intergenic 25.0%
! ATAGTTACAAAATACAAGAC+AGG + Chr4:56650998-56651017 None:intergenic 25.0%
! ATCAATGGGTACAAATAAAA+TGG - Chr4:56650949-56650968 MsG0480021317.01.T01:intron 25.0%
! ATGGTACATTATACAAATAG+AGG - Chr4:56653321-56653340 MsG0480021317.01.T01:intron 25.0%
! ATTTGTGACATTGATGTTAA+AGG - Chr4:56650807-56650826 MsG0480021317.01.T01:intron 25.0%
! CATATTGTGTTTATTAGGTT+CGG - Chr4:56653179-56653198 MsG0480021317.01.T01:CDS 25.0%
! TAGTTTAGTGCATTGAAAAT+AGG + Chr4:56650635-56650654 None:intergenic 25.0%
! TATGCTCATGTTGAAATATT+AGG - Chr4:56651749-56651768 MsG0480021317.01.T01:intron 25.0%
! TTGAATTTAAAGGGAAGTAA+TGG + Chr4:56652210-56652229 None:intergenic 25.0%
! TTTGAATGGTCTAGTATTAT+TGG - Chr4:56652946-56652965 MsG0480021317.01.T01:intron 25.0%
!! AAGATCATCTTTCTTTTTGA+AGG - Chr4:56651306-56651325 MsG0480021317.01.T01:intron 25.0%
!! ACAGTGCAATTTTCTTTTTA+AGG - Chr4:56652375-56652394 MsG0480021317.01.T01:intron 25.0%
!! AGATCATCTTTCTTTTTGAA+GGG - Chr4:56651307-56651326 MsG0480021317.01.T01:intron 25.0%
!! ATATAGAAGCTTTAACTCAT+GGG + Chr4:56650514-56650533 None:intergenic 25.0%
!! TAGCATTTTCTATGAATTCT+AGG + Chr4:56653128-56653147 None:intergenic 25.0%
!! TATATAGAAGCTTTAACTCA+TGG + Chr4:56650515-56650534 None:intergenic 25.0%
!! TGATAACAACTTGATCTTTT+AGG + Chr4:56652089-56652108 None:intergenic 25.0%
!! TTATTATAGACAAGTTGAAC+CGG + Chr4:56652237-56652256 None:intergenic 25.0%
!!! AGAAATTTTCAAGTTTCCTT+TGG - Chr4:56651601-56651620 MsG0480021317.01.T01:intron 25.0%
AAAAATCTTAGGCCAAGTAA+TGG + Chr4:56651841-56651860 None:intergenic 30.0%
AAATAAGTTGTCATGACTGT+TGG + Chr4:56652818-56652837 None:intergenic 30.0%
AACATCAATGTCACAAATAC+AGG + Chr4:56650805-56650824 None:intergenic 30.0%
AATAAGTTGTCATGACTGTT+GGG + Chr4:56652817-56652836 None:intergenic 30.0%
AGATAATGAATTAGGGTTGT+AGG - Chr4:56650440-56650459 MsG0480021317.01.T01:three_prime_UTR 30.0%
AGGGACATATTGTGTTTATT+AGG - Chr4:56653174-56653193 MsG0480021317.01.T01:CDS 30.0%
AGTAAATATGTTCTCGTTCT+TGG - Chr4:56653598-56653617 MsG0480021317.01.T01:CDS 30.0%
AGTCTCATATCAACTATGAA+CGG - Chr4:56652655-56652674 MsG0480021317.01.T01:intron 30.0%
ATAATTCTGTGCAGATACTT+AGG - Chr4:56650343-56650362 MsG0480021317.01.T01:three_prime_UTR 30.0%
ATACAATTCTTGGAAACTAC+CGG - Chr4:56653409-56653428 MsG0480021317.01.T01:intron 30.0%
CAATAACAGACTAATGATCT+AGG + Chr4:56652775-56652794 None:intergenic 30.0%
CATAAATGATTGAGCAGTTT+GGG + Chr4:56651140-56651159 None:intergenic 30.0%
CCTACTTATTTAGGTAGAAT+GGG - Chr4:56652000-56652019 MsG0480021317.01.T01:intron 30.0%
CGCAAAAAGATATATGTTCA+AGG + Chr4:56653496-56653515 None:intergenic 30.0%
CTACCAAATAGTTAAGAGTT+AGG + Chr4:56652038-56652057 None:intergenic 30.0%
CTACTTATTTAGGTAGAATG+GGG - Chr4:56652001-56652020 MsG0480021317.01.T01:intron 30.0%
CTTAATGTCGATACAATTCT+TGG - Chr4:56653399-56653418 MsG0480021317.01.T01:intron 30.0%
CTTATTCATGTAGATGTCTA+AGG - Chr4:56652296-56652315 MsG0480021317.01.T01:intron 30.0%
GCCAGTATTATAAATGGAAT+TGG - Chr4:56650316-56650335 MsG0480021317.01.T01:three_prime_UTR 30.0%
GTCAAGATACTATAAACTCA+GGG + Chr4:56651420-56651439 None:intergenic 30.0%
TACATGTTATGCACAATATG+TGG - Chr4:56651103-56651122 MsG0480021317.01.T01:intron 30.0%
TGAAAATTCTGATGTTTAGG+TGG - Chr4:56650895-56650914 MsG0480021317.01.T01:intron 30.0%
TGAGTTTATAGTATCTTGAC+AGG - Chr4:56651420-56651439 MsG0480021317.01.T01:intron 30.0%
TGATCAGGTGTAAAAATGTA+GGG + Chr4:56651535-56651554 None:intergenic 30.0%
TGTCAAGATACTATAAACTC+AGG + Chr4:56651421-56651440 None:intergenic 30.0%
TTGTCTATATTTGCTTATGC+AGG - Chr4:56652874-56652893 MsG0480021317.01.T01:intron 30.0%
TTTATAAGCTTGTCAATGAC+TGG - Chr4:56652914-56652933 MsG0480021317.01.T01:intron 30.0%
! AGTTGATGTATGGAGTAAAT+CGG - Chr4:56651164-56651183 MsG0480021317.01.T01:intron 30.0%
! ATCTAGGATTAACATGAGAT+TGG + Chr4:56652759-56652778 None:intergenic 30.0%
! GAATTGTATCGACATTAAGA+TGG + Chr4:56653398-56653417 None:intergenic 30.0%
! TAATGCCTTAAACTTTTGAG+TGG - Chr4:56652721-56652740 MsG0480021317.01.T01:intron 30.0%
! TATTATAGACAAGTTGAACC+GGG + Chr4:56652236-56652255 None:intergenic 30.0%
! TCAAAAATGACTTGTAAGGT+AGG - Chr4:56653630-56653649 MsG0480021317.01.T01:CDS 30.0%
! TCTAGGATTAACATGAGATT+GGG + Chr4:56652758-56652777 None:intergenic 30.0%
!! AAACCTTTCTACTTTTATGG+TGG - Chr4:56653551-56653570 MsG0480021317.01.T01:CDS 30.0%
!! GAGGTTTTACATTGATAACT+CGG - Chr4:56652112-56652131 MsG0480021317.01.T01:intron 30.0%
!! GGTAAACCTTTCTACTTTTA+TGG - Chr4:56653548-56653567 MsG0480021317.01.T01:CDS 30.0%
!! TACTCTCCTCTATTTCTAAA+TGG + Chr4:56653582-56653601 None:intergenic 30.0%
!! TATTGGTAACAACTTTTCCT+TGG - Chr4:56652963-56652982 MsG0480021317.01.T01:intron 30.0%
!! TCAAGTTTCCTTTGGAATTA+AGG - Chr4:56651609-56651628 MsG0480021317.01.T01:intron 30.0%
!! TTAGGGTTAACTTGTAACAA+CGG - Chr4:56652568-56652587 MsG0480021317.01.T01:intron 30.0%
!! TTTTACATTGATAACTCGGA+GGG - Chr4:56652116-56652135 MsG0480021317.01.T01:intron 30.0%
AAAATGTAGGGGAATAACCA+AGG + Chr4:56651523-56651542 None:intergenic 35.0%
AACAACCTGAAAACAAGAAG+GGG + Chr4:56650677-56650696 None:intergenic 35.0%
AACAGAAGCCTTAATTCCAA+AGG + Chr4:56651620-56651639 None:intergenic 35.0%
AACCGGGCTATTGAATTTAA+AGG + Chr4:56652220-56652239 None:intergenic 35.0%
AAGCCACCATAAAAGTAGAA+AGG + Chr4:56653557-56653576 None:intergenic 35.0%
AAGCCTAATACGTTTCACAT+AGG - Chr4:56651898-56651917 MsG0480021317.01.T01:intron 35.0%
ACCATTAGCGCTAAAAAGTA+TGG + Chr4:56651691-56651710 None:intergenic 35.0%
ACCGGGCTATTGAATTTAAA+GGG + Chr4:56652219-56652238 None:intergenic 35.0%
ACTATGAACGGGATAAATGT+TGG - Chr4:56652667-56652686 MsG0480021317.01.T01:intron 35.0%
ACTGCTGCCAGTATTATAAA+TGG - Chr4:56650310-56650329 MsG0480021317.01.T01:three_prime_UTR 35.0%
AGGTACAAGCCTACTTATTT+AGG - Chr4:56651991-56652010 MsG0480021317.01.T01:intron 35.0%
AGTAAATCGGAGTTTGGTAA+AGG - Chr4:56651177-56651196 MsG0480021317.01.T01:intron 35.0%
AGTTGAAGACTGCATAGTTT+AGG - Chr4:56653281-56653300 MsG0480021317.01.T01:intron 35.0%
ATAAGTTGTCATGACTGTTG+GGG + Chr4:56652816-56652835 None:intergenic 35.0%
ATCTCTCCAACCTTATATAC+AGG - Chr4:56651230-56651249 MsG0480021317.01.T01:intron 35.0%
ATGTGAAACTTACACTTGAG+GGG - Chr4:56652603-56652622 MsG0480021317.01.T01:intron 35.0%
ATGTTCTCGTTCTTGGAATT+TGG - Chr4:56653605-56653624 MsG0480021317.01.T01:CDS 35.0%
CAACAACCTGAAAACAAGAA+GGG + Chr4:56650678-56650697 None:intergenic 35.0%
CAGATCCTATTTAGCAGATA+TGG - Chr4:56653050-56653069 MsG0480021317.01.T01:intron 35.0%
CATCTCCACTCAAAAGTTTA+AGG + Chr4:56652729-56652748 None:intergenic 35.0%
CATTCTACTAGACCATTACT+TGG - Chr4:56651826-56651845 MsG0480021317.01.T01:intron 35.0%
CCCATTCTACCTAAATAAGT+AGG + Chr4:56652003-56652022 None:intergenic 35.0%
CTAAGGTCTCTTCTAACTAT+TGG - Chr4:56651454-56651473 MsG0480021317.01.T01:intron 35.0%
CTGATCAGGTGTAAAAATGT+AGG + Chr4:56651536-56651555 None:intergenic 35.0%
GAAAATTTGATAGACAGCGA+AGG + Chr4:56651022-56651041 None:intergenic 35.0%
GAACCTATGTGAAACGTATT+AGG + Chr4:56651904-56651923 None:intergenic 35.0%
GATCAGGTGTAAAAATGTAG+GGG + Chr4:56651534-56651553 None:intergenic 35.0%
GATCATCCTGTATATAAGGT+TGG + Chr4:56651239-56651258 None:intergenic 35.0%
GATGTGAAACTTACACTTGA+GGG - Chr4:56652602-56652621 MsG0480021317.01.T01:intron 35.0%
GCAAACCATATCTGCTAAAT+AGG + Chr4:56653058-56653077 None:intergenic 35.0%
GCACCTAACTCTTAACTATT+TGG - Chr4:56652032-56652051 MsG0480021317.01.T01:intron 35.0%
GCATAAATGATTGAGCAGTT+TGG + Chr4:56651141-56651160 None:intergenic 35.0%
GCATGACCTAAAATAAGAGT+TGG + Chr4:56651075-56651094 None:intergenic 35.0%
GCCTACTTATTTAGGTAGAA+TGG - Chr4:56651999-56652018 MsG0480021317.01.T01:intron 35.0%
GGAGTTCCATTTATAGTTCA+TGG - Chr4:56653302-56653321 MsG0480021317.01.T01:intron 35.0%
GTCTCATATCAACTATGAAC+GGG - Chr4:56652656-56652675 MsG0480021317.01.T01:intron 35.0%
TACCAAATAACTATACCCAG+TGG + Chr4:56653532-56653551 None:intergenic 35.0%
TATTTATCCAGGTTGCATGT+TGG - Chr4:56652841-56652860 MsG0480021317.01.T01:CDS 35.0%
TCCCTTTAAATTCAATAGCC+CGG - Chr4:56652215-56652234 MsG0480021317.01.T01:CDS 35.0%
TCCGAGTATAAAATGCCATT+GGG + Chr4:56653235-56653254 None:intergenic 35.0%
TCTTGGTATGAAGGATTCTT+GGG - Chr4:56650270-56650289 MsG0480021317.01.T01:three_prime_UTR 35.0%
TGTATCGAAAGTCTTTCTAG+CGG - Chr4:56652523-56652542 MsG0480021317.01.T01:intron 35.0%
TGTGTTTGTAGCTCTTTATC+TGG - Chr4:56650848-56650867 MsG0480021317.01.T01:CDS 35.0%
TGTTCTCGTTCTTGGAATTT+GGG - Chr4:56653606-56653625 MsG0480021317.01.T01:CDS 35.0%
TTATAGTATCTTGACAGGCT+CGG - Chr4:56651425-56651444 MsG0480021317.01.T01:intron 35.0%
TTCCGAGTATAAAATGCCAT+TGG + Chr4:56653236-56653255 None:intergenic 35.0%
TTCGTGAACATATTCTGACA+GGG - Chr4:56653155-56653174 MsG0480021317.01.T01:CDS 35.0%
TTTACTCCATACATCAACTC+AGG + Chr4:56651163-56651182 None:intergenic 35.0%
TTTCGTGAACATATTCTGAC+AGG - Chr4:56653154-56653173 MsG0480021317.01.T01:CDS 35.0%
! ACATAATGCACGAGTTTGTT+CGG + Chr4:56650417-56650436 None:intergenic 35.0%
! CATTTTTACACCTGATCAGA+TGG - Chr4:56651537-56651556 MsG0480021317.01.T01:intron 35.0%
! GATCAAGTTGTTATCAAGAG+AGG - Chr4:56652093-56652112 MsG0480021317.01.T01:intron 35.0%
! GCTTTGCCATTTAGAAATAG+AGG - Chr4:56653573-56653592 MsG0480021317.01.T01:CDS 35.0%
! GGGTTCAAAAATGACTTGTA+AGG - Chr4:56653626-56653645 MsG0480021317.01.T01:CDS 35.0%
! TAAAGGGAAGTAATGGAAGT+CGG + Chr4:56652203-56652222 None:intergenic 35.0%
! TATCAGATCTTGTTTCAGCT+TGG - Chr4:56652464-56652483 MsG0480021317.01.T01:CDS 35.0%
! TATCTTTTTGCGATCAAGTG+TGG - Chr4:56653504-56653523 MsG0480021317.01.T01:intron 35.0%
! TCCCAATGGCATTTTATACT+CGG - Chr4:56653231-56653250 MsG0480021317.01.T01:CDS 35.0%
! TTTACATTGATAACTCGGAG+GGG - Chr4:56652117-56652136 MsG0480021317.01.T01:intron 35.0%
! TTTAGCAGATATGGTTTGCA+AGG - Chr4:56653059-56653078 MsG0480021317.01.T01:intron 35.0%
!! AACGTATTAGGCTTTTCAAG+AGG + Chr4:56651892-56651911 None:intergenic 35.0%
!! ACTGGATGCTTTTGTTTGAA+TGG - Chr4:56652932-56652951 MsG0480021317.01.T01:intron 35.0%
!! ACTTGATCTTTTAGGAGAAC+TGG + Chr4:56652081-56652100 None:intergenic 35.0%
!! GTTTTACATTGATAACTCGG+AGG - Chr4:56652115-56652134 MsG0480021317.01.T01:intron 35.0%
!! TAAACTTTTGAGTGGAGATG+TGG - Chr4:56652729-56652748 MsG0480021317.01.T01:intron 35.0%
!! TCCATACTTTTTAGCGCTAA+TGG - Chr4:56651687-56651706 MsG0480021317.01.T01:intron 35.0%
!! TGTTGGTAGTCTTATTCAGT+TGG - Chr4:56651796-56651815 MsG0480021317.01.T01:intron 35.0%
!! TTTATGCCTGAGTTGATGTA+TGG - Chr4:56651154-56651173 MsG0480021317.01.T01:intron 35.0%
!!! TTCTTGTTTTCAGGTTGTTG+CGG - Chr4:56650678-56650697 MsG0480021317.01.T01:CDS 35.0%
AAATGCCATTGGGAGATAGA+AGG + Chr4:56653225-56653244 None:intergenic 40.0%
AAATTCCTTCCCTGAAGGAA+TGG + Chr4:56650758-56650777 None:intergenic 40.0%
AAGATATATGTTCAAGGCGG+TGG + Chr4:56653490-56653509 None:intergenic 40.0%
AAGATCTGATACCCACTTGT+TGG + Chr4:56652455-56652474 None:intergenic 40.0%
AGATCTGATACCCACTTGTT+GGG + Chr4:56652454-56652473 None:intergenic 40.0%
AGCCAAACTCTAAACGAGAA+GGG - Chr4:56650712-56650731 MsG0480021317.01.T01:CDS 40.0%
AGTTGTATCGGAAACTAAGC+GGG - Chr4:56653437-56653456 MsG0480021317.01.T01:intron 40.0%
CAAGACTGCATGAAAGAATG+TGG + Chr4:56650255-56650274 None:intergenic 40.0%
CACATTCTTTCATGCAGTCT+TGG - Chr4:56650253-56650272 MsG0480021317.01.T01:three_prime_UTR 40.0%
CTAACTATTGGAGCTGTACT+CGG - Chr4:56651466-56651485 MsG0480021317.01.T01:intron 40.0%
CTATATTTGCTTATGCAGGC+TGG - Chr4:56652878-56652897 MsG0480021317.01.T01:intron 40.0%
CTTGGTATGAAGGATTCTTG+GGG - Chr4:56650271-56650290 MsG0480021317.01.T01:three_prime_UTR 40.0%
GAGTTGTATCGGAAACTAAG+CGG - Chr4:56653436-56653455 MsG0480021317.01.T01:intron 40.0%
GATCTGCATCGAGGTAAATT+GGG + Chr4:56653036-56653055 None:intergenic 40.0%
GCAACAACCTGAAAACAAGA+AGG + Chr4:56650679-56650698 None:intergenic 40.0%
GGAATTAAGGCTTCTGTTAG+TGG - Chr4:56651622-56651641 MsG0480021317.01.T01:intron 40.0%
GGATGTGAAACTTACACTTG+AGG - Chr4:56652601-56652620 MsG0480021317.01.T01:intron 40.0%
GTATGGAGTAAATCGGAGTT+TGG - Chr4:56651171-56651190 MsG0480021317.01.T01:intron 40.0%
GTCTTGGTATGAAGGATTCT+TGG - Chr4:56650269-56650288 MsG0480021317.01.T01:three_prime_UTR 40.0%
TAACTATTGGAGCTGTACTC+GGG - Chr4:56651467-56651486 MsG0480021317.01.T01:intron 40.0%
TAATTCAAGAACTGACCTCC+TGG + Chr4:56651567-56651586 None:intergenic 40.0%
TACCCATTGAAATCCAGCAA+GGG + Chr4:56653096-56653115 None:intergenic 40.0%
TACGTTTCACATAGGTTCCA+TGG - Chr4:56651906-56651925 MsG0480021317.01.T01:intron 40.0%
TGCCACTGGGTATAGTTATT+TGG - Chr4:56653527-56653546 MsG0480021317.01.T01:intron 40.0%
TGTAACAACGGTGCAAGTAT+AGG - Chr4:56652580-56652599 MsG0480021317.01.T01:intron 40.0%
TGTAATAGCCTTTGCACTTG+AGG - Chr4:56651959-56651978 MsG0480021317.01.T01:intron 40.0%
TGTGCAGATACTTAGGCTAT+GGG - Chr4:56650350-56650369 MsG0480021317.01.T01:three_prime_UTR 40.0%
TTACCCATTGAAATCCAGCA+AGG + Chr4:56653097-56653116 None:intergenic 40.0%
TTCATGCAGTCTTGGTATGA+AGG - Chr4:56650261-56650280 MsG0480021317.01.T01:three_prime_UTR 40.0%
TTCCCTTGCTGGATTTCAAT+GGG - Chr4:56653091-56653110 MsG0480021317.01.T01:intron 40.0%
TTGCTGGATTTCAATGGGTA+AGG - Chr4:56653096-56653115 MsG0480021317.01.T01:intron 40.0%
TTGTTGGAACATCTGTTCCT+TGG - Chr4:56651503-56651522 MsG0480021317.01.T01:intron 40.0%
TTTCCCTTGCTGGATTTCAA+TGG - Chr4:56653090-56653109 MsG0480021317.01.T01:intron 40.0%
! ATCCCTTCTCGTTTAGAGTT+TGG + Chr4:56650717-56650736 None:intergenic 40.0%
! TCAACTTTTGCAGCTCATAC+TGG + Chr4:56653267-56653286 None:intergenic 40.0%
! TGACTTGTAAGGTAGGAATG+TGG - Chr4:56653637-56653656 MsG0480021317.01.T01:CDS 40.0%
! TTAGGAGGCGTATTTCGTTA+GGG - Chr4:56652551-56652570 MsG0480021317.01.T01:intron 40.0%
!! ATTAGGCTTTTCAAGAGGCT+TGG + Chr4:56651887-56651906 None:intergenic 40.0%
!! CTTTTAGGAGAACTGGATCT+TGG + Chr4:56652074-56652093 None:intergenic 40.0%
!!! ACAACTTTTCCTTGGTTTGC+TGG - Chr4:56652971-56652990 MsG0480021317.01.T01:CDS 40.0%
!!! TTACACCCCTTCTTGTTTTC+AGG - Chr4:56650669-56650688 MsG0480021317.01.T01:CDS 40.0%
ACAAGAACCAACATGCAACC+TGG + Chr4:56652851-56652870 None:intergenic 45.0%
ACCTGATCAGATGGTTATCC+AGG - Chr4:56651546-56651565 MsG0480021317.01.T01:intron 45.0%
ACTTAGGCTATGGGATTGCT+GGG - Chr4:56650359-56650378 MsG0480021317.01.T01:three_prime_UTR 45.0%
ATTTGCTTATGCAGGCTGGA+CGG - Chr4:56652882-56652901 MsG0480021317.01.T01:intron 45.0%
CTATGTACACCAGCAAACCA+AGG + Chr4:56652983-56653002 None:intergenic 45.0%
CTGTGCAGATACTTAGGCTA+TGG - Chr4:56650349-56650368 MsG0480021317.01.T01:three_prime_UTR 45.0%
GACAGAAATTCCTTCCCTGA+AGG + Chr4:56650763-56650782 None:intergenic 45.0%
GAGCCAAACTCTAAACGAGA+AGG - Chr4:56650711-56650730 MsG0480021317.01.T01:CDS 45.0%
GCTAAATAGGATCTGCATCG+AGG + Chr4:56653045-56653064 None:intergenic 45.0%
GGATCTGCATCGAGGTAAAT+TGG + Chr4:56653037-56653056 None:intergenic 45.0%
GGATTTCAATGGGTAAGGCT+CGG - Chr4:56653101-56653120 MsG0480021317.01.T01:intron 45.0%
GTTGTATCGGAAACTAAGCG+GGG - Chr4:56653438-56653457 MsG0480021317.01.T01:intron 45.0%
TACTTAGGCTATGGGATTGC+TGG - Chr4:56650358-56650377 MsG0480021317.01.T01:three_prime_UTR 45.0%
TCCTGGATAACCATCTGATC+AGG + Chr4:56651550-56651569 None:intergenic 45.0%
TGATCAGATGGTTATCCAGG+AGG - Chr4:56651549-56651568 MsG0480021317.01.T01:intron 45.0%
TTCTTGGGTTCAAGTGTGAG+TGG - Chr4:56652630-56652649 MsG0480021317.01.T01:intron 45.0%
TTGCCTTCACCATTCCTTCA+GGG - Chr4:56650746-56650765 MsG0480021317.01.T01:intron 45.0%
TTTCCGATACAACTCAGCAC+CGG + Chr4:56653431-56653450 None:intergenic 45.0%
TTTGCCTTCACCATTCCTTC+AGG - Chr4:56650745-56650764 MsG0480021317.01.T01:intron 45.0%
! ACACTTGAGGGGCATATTCT+TGG - Chr4:56652614-56652633 MsG0480021317.01.T01:intron 45.0%
! ACGAGTTTGTTCGGCATACT+TGG + Chr4:56650408-56650427 None:intergenic 45.0%
! AGATCTTGTTTCAGCTTGGC+GGG - Chr4:56652468-56652487 MsG0480021317.01.T01:CDS 45.0%
! ATCTGATACCCACTTGTTGG+GGG + Chr4:56652452-56652471 None:intergenic 45.0%
! CACTTGAGGGGCATATTCTT+GGG - Chr4:56652615-56652634 MsG0480021317.01.T01:intron 45.0%
! CAGATCTTGTTTCAGCTTGG+CGG - Chr4:56652467-56652486 MsG0480021317.01.T01:CDS 45.0%
! CGAGTTTGTTCGGCATACTT+GGG + Chr4:56650407-56650426 None:intergenic 45.0%
! GATATGGTTTGCAAGGCTGT+TGG - Chr4:56653066-56653085 MsG0480021317.01.T01:intron 45.0%
! GATCTGATACCCACTTGTTG+GGG + Chr4:56652453-56652472 None:intergenic 45.0%
! GATTGAGCAGTTTGGGATAG+AGG + Chr4:56651133-56651152 None:intergenic 45.0%
! GTCTTTCTAGCGGTGTAGTT+AGG - Chr4:56652533-56652552 MsG0480021317.01.T01:intron 45.0%
! GTTAGGAGGCGTATTTCGTT+AGG - Chr4:56652550-56652569 MsG0480021317.01.T01:intron 45.0%
! TTTCTAGCGGTGTAGTTAGG+AGG - Chr4:56652536-56652555 MsG0480021317.01.T01:intron 45.0%
!!! CTGTACTCGGGTTGCTTTTT+GGG - Chr4:56651479-56651498 MsG0480021317.01.T01:intron 45.0%
!!! GGGTTGCTTTTTGGGATTGT+TGG - Chr4:56651487-56651506 MsG0480021317.01.T01:intron 45.0%
ATACCAGCAATGTTCCCTCC+AGG + Chr4:56651732-56651751 None:intergenic 50.0%
CGGAAACTAAGCGGGGAAAT+GGG - Chr4:56653445-56653464 MsG0480021317.01.T01:intron 50.0%
CTTAGGCTATGGGATTGCTG+GGG - Chr4:56650360-56650379 MsG0480021317.01.T01:three_prime_UTR 50.0%
CTTCACCATTCCTTCAGGGA+AGG - Chr4:56650750-56650769 MsG0480021317.01.T01:intron 50.0%
CTTCCCTGAAGGAATGGTGA+AGG + Chr4:56650752-56650771 None:intergenic 50.0%
GAAACTAAGCGGGGAAATGG+GGG - Chr4:56653447-56653466 MsG0480021317.01.T01:intron 50.0%
GCAGCAGTCAAAGCCTTCAA+GGG + Chr4:56650298-56650317 None:intergenic 50.0%
GGAAACTAAGCGGGGAAATG+GGG - Chr4:56653446-56653465 MsG0480021317.01.T01:intron 50.0%
TCATGACTGTTGGGGAGTCT+GGG + Chr4:56652808-56652827 None:intergenic 50.0%
TCGGAAACTAAGCGGGGAAA+TGG - Chr4:56653444-56653463 MsG0480021317.01.T01:intron 50.0%
TTCTAGCGCCTCAAGTGCAA+AGG + Chr4:56651970-56651989 None:intergenic 50.0%
TTTGCTTATGCAGGCTGGAC+GGG - Chr4:56652883-56652902 MsG0480021317.01.T01:intron 50.0%
! ATCTTGTTTCAGCTTGGCGG+GGG - Chr4:56652470-56652489 MsG0480021317.01.T01:CDS 50.0%
! CTACCGGTGCTGAGTTGTAT+CGG - Chr4:56653425-56653444 MsG0480021317.01.T01:intron 50.0%
! GATCTTGTTTCAGCTTGGCG+GGG - Chr4:56652469-56652488 MsG0480021317.01.T01:CDS 50.0%
! TGCACTTGAGGCGCTAGAAA+AGG - Chr4:56651971-56651990 MsG0480021317.01.T01:intron 50.0%
!!! GCTGTACTCGGGTTGCTTTT+TGG - Chr4:56651478-56651497 MsG0480021317.01.T01:intron 50.0%
ATGGTCACACCCGCAACTGT+TGG - Chr4:56651706-56651725 MsG0480021317.01.T01:intron 55.0%
CATGACTGTTGGGGAGTCTG+GGG + Chr4:56652807-56652826 None:intergenic 55.0%
CTGCGCCTTCTATCTCCCAA+TGG - Chr4:56653217-56653236 MsG0480021317.01.T01:CDS 55.0%
GGATTCTTGGGGACCCTTGA+AGG - Chr4:56650282-56650301 MsG0480021317.01.T01:three_prime_UTR 55.0%
GGCAGCAGTCAAAGCCTTCA+AGG + Chr4:56650299-56650318 None:intergenic 55.0%
GTCATGACTGTTGGGGAGTC+TGG + Chr4:56652809-56652828 None:intergenic 55.0%
! ACCCACTTGTTGGGGGAGTA+CGG + Chr4:56652445-56652464 None:intergenic 55.0%
! GGGAGATAGAAGGCGCAGAA+GGG + Chr4:56653215-56653234 None:intergenic 55.0%
! TGGGAGATAGAAGGCGCAGA+AGG + Chr4:56653216-56653235 None:intergenic 55.0%
!! CGATCAAGTGTGGTGCCACT+GGG - Chr4:56653514-56653533 MsG0480021317.01.T01:intron 55.0%
!!! GGCTGTTGGTTTTCCCTTGC+TGG - Chr4:56653080-56653099 MsG0480021317.01.T01:intron 55.0%
AAGCGGGGAAATGGGGGATG+TGG - Chr4:56653453-56653472 MsG0480021317.01.T01:intron 60.0%
AGCGGGGAAATGGGGGATGT+GGG - Chr4:56653454-56653473 MsG0480021317.01.T01:intron 60.0%
ATGGGATTGCTGGGGCTGCA+TGG - Chr4:56650368-56650387 MsG0480021317.01.T01:three_prime_UTR 60.0%
CCCGTACTCCCCCAACAAGT+GGG - Chr4:56652441-56652460 MsG0480021317.01.T01:CDS 60.0%
TCCCGTACTCCCCCAACAAG+TGG - Chr4:56652440-56652459 MsG0480021317.01.T01:CDS 60.0%
TCCCTCCAGGCCAACAGTTG+CGG + Chr4:56651719-56651738 None:intergenic 60.0%
TGGCCTGGAGGGAACATTGC+TGG - Chr4:56651726-56651745 MsG0480021317.01.T01:intron 60.0%
TGGGATTGCTGGGGCTGCAT+GGG - Chr4:56650369-56650388 MsG0480021317.01.T01:three_prime_UTR 60.0%
! CCCACTTGTTGGGGGAGTAC+GGG + Chr4:56652444-56652463 None:intergenic 60.0%
! GACAGGCTCGGTCGCTTCTA+AGG - Chr4:56651437-56651456 MsG0480021317.01.T01:intron 60.0%
! TGGGGCTGCATGGGCTACAT+TGG - Chr4:56650378-56650397 MsG0480021317.01.T01:three_prime_UTR 60.0%
!! GCGATCAAGTGTGGTGCCAC+TGG - Chr4:56653513-56653532 MsG0480021317.01.T01:intron 60.0%
CACACCCGCAACTGTTGGCC+TGG - Chr4:56651711-56651730 MsG0480021317.01.T01:intron 65.0%
CCCTCCAGGCCAACAGTTGC+GGG + Chr4:56651718-56651737 None:intergenic 65.0%
! ACCCGCAACTGTTGGCCTGG+AGG - Chr4:56651714-56651733 MsG0480021317.01.T01:intron 65.0%
! CCCGCAACTGTTGGCCTGGA+GGG - Chr4:56651715-56651734 MsG0480021317.01.T01:intron 65.0%
! AGCTTGGCGGGGGAGCGTGA+GGG - Chr4:56652480-56652499 MsG0480021317.01.T01:CDS 70.0%
! CAGCTTGGCGGGGGAGCGTG+AGG - Chr4:56652479-56652498 MsG0480021317.01.T01:CDS 75.0%
! CTTGGCGGGGGAGCGTGAGG+GGG - Chr4:56652482-56652501 MsG0480021317.01.T01:CDS 75.0%
! GCTTGGCGGGGGAGCGTGAG+GGG - Chr4:56652481-56652500 MsG0480021317.01.T01:CDS 75.0%
Chromosome Type Strat End Strand Name
Chr4 gene 56650220 56653730 56650220 ID=MsG0480021317.01;Name=MsG0480021317.01
Chr4 mRNA 56650220 56653730 56650220 ID=MsG0480021317.01.T01;Parent=MsG0480021317.01;Name=MsG0480021317.01.T01;_AED=0.49;_eAED=0.49;_QI=0|1|0.88|1|0.87|0.77|9|433|315
Chr4 exon 56650220 56650754 56650220 ID=MsG0480021317.01.T01:exon:7094;Parent=MsG0480021317.01.T01
Chr4 exon 56650838 56650897 56650838 ID=MsG0480021317.01.T01:exon:7093;Parent=MsG0480021317.01.T01
Chr4 exon 56650983 56651054 56650983 ID=MsG0480021317.01.T01:exon:7092;Parent=MsG0480021317.01.T01
Chr4 exon 56652203 56652280 56652203 ID=MsG0480021317.01.T01:exon:7091;Parent=MsG0480021317.01.T01
Chr4 exon 56652380 56652508 56652380 ID=MsG0480021317.01.T01:exon:7090;Parent=MsG0480021317.01.T01
Chr4 exon 56652752 56652862 56652752 ID=MsG0480021317.01.T01:exon:7089;Parent=MsG0480021317.01.T01
Chr4 exon 56652968 56653036 56652968 ID=MsG0480021317.01.T01:exon:7088;Parent=MsG0480021317.01.T01
Chr4 exon 56653122 56653259 56653122 ID=MsG0480021317.01.T01:exon:7087;Parent=MsG0480021317.01.T01
Chr4 exon 56653542 56653730 56653542 ID=MsG0480021317.01.T01:exon:7086;Parent=MsG0480021317.01.T01
Chr4 CDS 56653542 56653730 56653542 ID=MsG0480021317.01.T01:cds;Parent=MsG0480021317.01.T01
Chr4 CDS 56653122 56653259 56653122 ID=MsG0480021317.01.T01:cds;Parent=MsG0480021317.01.T01
Chr4 CDS 56652968 56653036 56652968 ID=MsG0480021317.01.T01:cds;Parent=MsG0480021317.01.T01
Chr4 CDS 56652752 56652862 56652752 ID=MsG0480021317.01.T01:cds;Parent=MsG0480021317.01.T01
Chr4 CDS 56652380 56652508 56652380 ID=MsG0480021317.01.T01:cds;Parent=MsG0480021317.01.T01
Chr4 CDS 56652203 56652280 56652203 ID=MsG0480021317.01.T01:cds;Parent=MsG0480021317.01.T01
Chr4 CDS 56650983 56651054 56650983 ID=MsG0480021317.01.T01:cds;Parent=MsG0480021317.01.T01
Chr4 CDS 56650838 56650897 56650838 ID=MsG0480021317.01.T01:cds;Parent=MsG0480021317.01.T01
Chr4 CDS 56650653 56650754 56650653 ID=MsG0480021317.01.T01:cds;Parent=MsG0480021317.01.T01
Chr4 three_prime_UTR 56650220 56650652 56650220 ID=MsG0480021317.01.T01:three_prime_utr;Parent=MsG0480021317.01.T01
Gene Sequence

>MsG0480021317.01.T01

TTGGGTTATCATTTAATTCATATTATTGGTATCCACATTCTTTCATGCAGTCTTGGTATGAAGGATTCTTGGGGACCCTTGAAGGCTTTGACTGCTGCCAGTATTATAAATGGAATTGGTGATATAATTCTGTGCAGATACTTAGGCTATGGGATTGCTGGGGCTGCATGGGCTACATTGGCATCCCAAGTTGTTGCGGCGTATATGATGAGCCAAACTCTAAACGAGAAGGGATACAATGCATTTGCCTTCACCATTCCTTCAGGGAAGGAATTTCTGTCAATATTAAGTCTTGCTGCTCCTGTATTTGTGACATTGATGTTAAAGGTGGCTTTCTACTCTCTACTTATATATTTTGCTACATCAATGGGTACAAATAAAATGGCTGCTCATCAAGTCATGCTTCAGATCTACATGTTATGCACAATATGTGGTGAACCTCTATCCCAAACTGCTCAATCATTTATGCCTGAGTTGATGTATGGAGTAAATCGGAGTTTGGTAAAGGCTCGGTCGCTTCTAAGGTCTCTTCTAACTATTGGAGCTGTACTCGGGTTGCTTTTTGGGATTGTTGGAACATCTGTTCCTTGGTTATTCCCCTACATTTTTACACCTGATCAGATGGTTATCCAGGAGATGCATAAGATACTGATTCCATACTTTTTAGCGCTAATGGTCACACCCGCAACTGTTGGCCTGGAGGGAACATTGCTGGCTGGACGGGATCTTAGATTTATAAGCTTGTCAATGACTGGATGCTTTTGTTTGAATGGTCTAGTATTATTGATCCTATTTAGCAGATATGGTTTGCAAGGCTGTTGGTTTTCCCTTGCTGGATTTCAATGGGTTCGGTTTTCATCAGCCCTTCTGCGCCTTCTATCTCCCAATGGCATTTTATACTCGGAAGATATAAGCCAGTATGAGCTGCAAAAGTTGAAGACTGCATAG

Protein sequence

>MsG0480021317.01.T01

LGYHLIHIIGIHILSCSLGMKDSWGPLKALTAASIINGIGDIILCRYLGYGIAGAAWATLASQVVAAYMMSQTLNEKGYNAFAFTIPSGKEFLSILSLAAPVFVTLMLKVAFYSLLIYFATSMGTNKMAAHQVMLQIYMLCTICGEPLSQTAQSFMPELMYGVNRSLVKARSLLRSLLTIGAVLGLLFGIVGTSVPWLFPYIFTPDQMVIQEMHKILIPYFLALMVTPATVGLEGTLLAGRDLRFISLSMTGCFCLNGLVLLILFSRYGLQGCWFSLAGFQWVRFSSALLRLLSPNGILYSEDISQYELQKLKTA*