AlfalfaGEDB | MsG0380013540.01

M. sativa cultivar ZhongmuNo.1 / MsG0380013540.01

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380013540.01.T01	XP_024633597.1	94.878	410	18	3	82	490	57	464	0	790

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380013540.01.T01	F4IDQ5	38.565	446	202	14	89	489	62	480	5.29E-63	215

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380013540.01.T01	A0A396IM97	95.086	407	17	3	85	490	59	463	0.0	786

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080047815.01	MsG0380013540.01	0.800406	1.462722e-48	6.805504e-46
MsG0180001719.01	MsG0380013540.01	0.800914	1.152403e-48	5.431401e-46
MsG0180004583.01	MsG0380013540.01	0.800604	1.333163e-48	6.233773e-46
MsG0180004828.01	MsG0380013540.01	0.807865	4.102448e-50	2.310441e-47
MsG0180005655.01	MsG0380013540.01	0.808515	2.982498e-50	1.708757e-47
MsG0180006183.01	MsG0380013540.01	0.810578	1.075328e-50	6.506088e-48
MsG0380013540.01	MsG0380014542.01	0.833269	5.876067e-56	6.732698e-53
MsG0380013540.01	MsG0380014544.01	0.856747	2.610323e-62	6.292688e-59
MsG0380013540.01	MsG0380015340.01	0.824562	7.545055e-54	6.707539e-51
MsG0380013540.01	MsG0380017416.01	0.803055	4.184302e-49	2.082043e-46
MsG0380013540.01	MsG0380017696.01	0.828260	9.921883e-55	9.810584e-52
MsG0380013540.01	MsG0480018228.01	0.822384	2.438119e-53	2.037724e-50
MsG0380013540.01	MsG0480018875.01	0.803279	3.760414e-49	1.881946e-46
MsG0380013540.01	MsG0480020057.01	0.803998	2.667022e-49	1.359727e-46
MsG0380013540.01	MsG0480020937.01	0.814294	1.657808e-51	1.108072e-48
MsG0380013540.01	MsG0480021100.01	0.833076	6.562821e-56	7.477289e-53
MsG0380013540.01	MsG0480021486.01	0.804711	1.894573e-49	9.837729e-47
MsG0380013540.01	MsG0480021740.01	0.801469	8.872039e-49	4.240254e-46
MsG0380013540.01	MsG0480021773.01	0.859333	4.446076e-63	1.170054e-59
MsG0380013540.01	MsG0480021902.01	0.828002	1.144850e-54	1.123642e-51
MsG0380013540.01	MsG0480022307.01	0.806890	6.603000e-50	3.625748e-47
MsG0380013540.01	MsG0480022378.01	0.841737	3.963957e-58	5.878391e-55
MsG0380013540.01	MsG0480023842.01	0.827908	1.206480e-54	1.180763e-51
MsG0380013540.01	MsG0480024019.01	0.807785	4.265432e-50	2.397322e-47
MsG0380013540.01	MsG0580024276.01	0.820971	5.173623e-53	4.155129e-50
MsG0380013540.01	MsG0580030141.01	0.801748	7.779338e-49	3.744211e-46
MsG0380013540.01	MsG0780036553.01	0.800371	1.487005e-48	6.912457e-46
MsG0380013540.01	MsG0780038736.01	0.834623	2.693217e-56	3.213770e-53
MsG0380013540.01	MsG0780040459.01	0.818656	1.749410e-52	1.317307e-49
MsG0380013540.01	MsG0780040830.01	0.849964	2.306152e-60	4.447808e-57
MsG0380013540.01	MsG0780040899.01	0.811445	6.977018e-51	4.319791e-48
MsG0380013540.01	MsG0880045647.01	0.842058	3.259611e-58	4.883300e-55
MsG0380013540.01	MsG0880045879.01	0.814925	1.201615e-51	8.168964e-49
MsG0280007695.01	MsG0380013540.01	0.803362	3.614271e-49	1.812608e-46

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380013540.01.T01	MTR_3g450760	95.086	407	17	3	85	490	35	439	0.0	786
MsG0380013540.01.T01	MTR_5g090900	46.963	428	179	7	85	470	52	473	2.09e-111	338
MsG0380013540.01.T01	MTR_8g024070	56.627	83	32	2	1	80	1	82	9.70e-23	92.4
MsG0380013540.01.T01	MTR_6g024030	92.000	50	4	0	1	50	1	50	1.59e-22	96.7
MsG0380013540.01.T01	MTR_7g039300	75.472	53	13	0	1	53	1	53	7.18e-19	86.3
MsG0380013540.01.T01	MTR_7g045450	80.000	50	10	0	1	50	1	50	1.48e-18	85.9
MsG0380013540.01.T01	MTR_6g073570	80.000	50	10	0	1	50	1	50	1.48e-18	85.9
MsG0380013540.01.T01	MTR_1g101230	65.385	52	18	0	1	52	1	52	6.91e-16	75.9
MsG0380013540.01.T01	MTR_1g069610	39.683	126	62	4	332	449	317	436	5.07e-15	77.4
MsG0380013540.01.T01	MTR_3g015660	66.000	50	17	0	1	50	1	50	5.82e-14	72.0
MsG0380013540.01.T01	MTR_8g005940	64.000	50	18	0	1	50	1	50	1.83e-13	71.2
MsG0380013540.01.T01	MTR_1g011490	64.000	50	18	0	1	50	1	50	3.13e-13	70.9
MsG0380013540.01.T01	MTR_7g024060	64.000	50	18	0	1	50	1	50	3.49e-13	70.9
MsG0380013540.01.T01	MTR_6g087820	64.000	50	18	0	1	50	1	50	3.49e-13	70.9
MsG0380013540.01.T01	MTR_5g081190	64.000	50	18	0	1	50	1	50	3.49e-13	70.9
MsG0380013540.01.T01	MTR_5g030110	64.000	50	18	0	1	50	1	50	3.49e-13	70.9
MsG0380013540.01.T01	MTR_5g091480	64.000	50	18	0	1	50	1	50	3.49e-13	70.9
MsG0380013540.01.T01	MTR_5g056290	64.000	50	18	0	1	50	1	50	3.49e-13	70.9
MsG0380013540.01.T01	MTR_3g031190	64.000	50	18	0	1	50	1	50	3.49e-13	70.9
MsG0380013540.01.T01	MTR_2g005490	64.000	50	18	0	1	50	1	50	3.49e-13	70.9
MsG0380013540.01.T01	MTR_2g007410	64.000	50	18	0	1	50	1	50	3.49e-13	70.9
MsG0380013540.01.T01	MTR_2g010570	64.000	50	18	0	1	50	1	50	3.49e-13	70.9
MsG0380013540.01.T01	MTR_1g023370	64.000	50	18	0	1	50	1	50	4.04e-13	70.5
MsG0380013540.01.T01	MTR_1g082860	64.000	50	18	0	1	50	1	50	4.04e-13	70.1
MsG0380013540.01.T01	MTR_7g074180	62.000	50	19	0	1	50	1	50	5.12e-13	70.5
MsG0380013540.01.T01	MTR_4g058660	65.217	46	16	0	5	50	5	50	7.08e-12	67.0
MsG0380013540.01.T01	MTR_7g451880	65.217	46	16	0	5	50	6	51	8.32e-12	66.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380013540.01.T01	AT1G06660	38.565	446	202	14	89	489	62	480	5.39e-64	215
MsG0380013540.01.T01	AT2G30820	35.748	428	199	13	89	481	31	417	8.58e-51	179
MsG0380013540.01.T01	AT2G30820	35.748	428	199	13	89	481	31	417	8.58e-51	179

Find 144 sgRNAs with CRISPR-Local

Find 410 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TAGCTTTGTTATTGATTTAA+TGG	0.181203	3:+40244134	MsG0380013540.01.T01:intron
TCCTCACCTAGGCTGTTATT+TGG	0.189762	3:-40246728	None:intergenic
GTCCTCCAAAGTTTCGTTCT+TGG	0.196344	3:+40245928	MsG0380013540.01.T01:CDS
AGGATTGTTGGGTTAAATAT+TGG	0.204732	3:+40247937	MsG0380013540.01.T01:three_prime_UTR
GAAGCCTGCATCTGTTATTT+TGG	0.212458	3:+40246901	MsG0380013540.01.T01:CDS
TAGCATGCCAGCTCACTTTC+TGG	0.229927	3:-40247187	None:intergenic
TTGTATTTGTTGGTTGAATT+TGG	0.246872	3:-40247073	None:intergenic
TGGAAGAAGGCTTGTCTTCT+TGG	0.254792	3:+40246876	MsG0380013540.01.T01:CDS
CGATGGGACTGAAATGAATA+AGG	0.261654	3:+40246529	MsG0380013540.01.T01:CDS
GGAGGAGAGAAGAAAGAAAA+TGG	0.286742	3:+40246922	MsG0380013540.01.T01:CDS
TATCACGGATCAGCCATATA+TGG	0.290975	3:-40241904	None:intergenic
ATCTTCATTGGGGTAGGATT+TGG	0.293500	3:-40246647	None:intergenic
CATCTTCATGAACATGATAT+TGG	0.304692	3:+40241946	MsG0380013540.01.T01:CDS
TCCTGTGAGTCATCGGCTTA+TGG	0.325210	3:+40246596	MsG0380013540.01.T01:CDS
AGCACTGCATTGGGACTTAA+TGG	0.325533	3:-40247830	None:intergenic
TCATACTTCTTTGTATTTGT+TGG	0.327303	3:-40247083	None:intergenic
GGATTGTTGGGTTAAATATT+GGG	0.336604	3:+40247938	MsG0380013540.01.T01:three_prime_UTR
CCACCTGTCACAACTGAAAT+GGG	0.337191	3:-40241848	None:intergenic
ATCCCTTCAGATATCTTCAT+TGG	0.349727	3:-40246659	None:intergenic
TCCACCTGTCACAACTGAAA+TGG	0.349912	3:-40241849	None:intergenic
TATATGGCTGATCCGTGATA+TGG	0.365926	3:+40241907	MsG0380013540.01.T01:CDS
TTGTCTGTGTGGCCCATATA+TGG	0.376556	3:+40241891	MsG0380013540.01.T01:CDS
CCTTCATGTAGTAACGATTC+TGG	0.376618	3:+40245906	MsG0380013540.01.T01:CDS
TTGAATGGTTGGACATTAGT+TGG	0.377570	3:-40245978	None:intergenic
TGTTATTTGGATACACAAAC+TGG	0.390899	3:-40246715	None:intergenic
TCCCTTCAGATATCTTCATT+GGG	0.406133	3:-40246658	None:intergenic
TGGGTTAAATATTGGGCATT+GGG	0.410553	3:+40247945	MsG0380013540.01.T01:three_prime_UTR
TCATTCTCATCAAAAGCAAT+TGG	0.422122	3:-40247681	None:intergenic
TTGGGAGTTGGCGGATTGAA+TGG	0.422674	3:-40245993	None:intergenic
CAAGTACCCCTACTGAAATT+CGG	0.424717	3:+40245856	MsG0380013540.01.T01:CDS
TGCAGCAACCATCCCAATGA+TGG	0.431713	3:-40246987	None:intergenic
TATATTTGATGAGGATTGTT+GGG	0.432129	3:+40247926	MsG0380013540.01.T01:three_prime_UTR
AAGACAATGTGCATCGTAAT+GGG	0.432569	3:+40244753	MsG0380013540.01.T01:CDS
TTGGGTTAAATATTGGGCAT+TGG	0.435150	3:+40247944	MsG0380013540.01.T01:three_prime_UTR
ATGTTCCTGCGCAAGATTCA+AGG	0.435844	3:+40246786	MsG0380013540.01.T01:CDS
GAATTTGCTCTTTGTAAAGC+AGG	0.440323	3:+40244567	MsG0380013540.01.T01:intron
AGGGATCACAGAGTGATGAT+AGG	0.453830	3:+40244789	MsG0380013540.01.T01:CDS
CCTGTCGATAGGCCCATCAT+TGG	0.456758	3:+40246974	MsG0380013540.01.T01:CDS
AATGGATTATGAAATGATGA+AGG	0.458253	3:+40244152	MsG0380013540.01.T01:CDS
CCAAGCAATCAGCACTGCAT+TGG	0.458893	3:-40247840	None:intergenic
CAAGCAATCAGCACTGCATT+GGG	0.465777	3:-40247839	None:intergenic
TTAACAGAGTAAACAGTTCC+AGG	0.468567	3:-40246689	None:intergenic
GAGCAAGATACTTGAGGAAG+AGG	0.471401	3:+40246760	MsG0380013540.01.T01:CDS
GAAGACAATGTGCATCGTAA+TGG	0.477516	3:+40244752	MsG0380013540.01.T01:CDS
AGTTGTGACAGGTGGAAAGA+AGG	0.481034	3:+40241856	MsG0380013540.01.T01:CDS
AGAAGCCAAGAACGAAACTT+TGG	0.484007	3:-40245933	None:intergenic
ATCACGGATCAGCCATATAT+GGG	0.485155	3:-40241903	None:intergenic
AATATTGGGCATTGGGAGAT+CGG	0.485654	3:+40247952	MsG0380013540.01.T01:three_prime_UTR
TCCTCCAAAATAACAGATGC+AGG	0.487575	3:-40246905	None:intergenic
GATGGGACTGAAATGAATAA+GGG	0.488622	3:+40246530	MsG0380013540.01.T01:CDS
TCAAATATATACAATACAAG+TGG	0.489054	3:-40247912	None:intergenic
ACGACGCCACGGACTGTGGA+TGG	0.492778	3:-40247743	None:intergenic
ATGGGAATATCATGACTCTT+CGG	0.494202	3:+40246475	MsG0380013540.01.T01:CDS
CCAATGCACACAATACTCAA+TGG	0.495131	3:+40246456	MsG0380013540.01.T01:CDS
TTCATGAAGATGATATCGTC+TGG	0.501131	3:-40241935	None:intergenic
GTCCATCTCATTACTCTATG+AGG	0.502624	3:+40247785	MsG0380013540.01.T01:three_prime_UTR
GCAAAGTTTCTTAAAGCTTG+TGG	0.503956	3:+40245825	MsG0380013540.01.T01:CDS
ATCTTCCTTGAATCTTGCGC+AGG	0.504663	3:-40246791	None:intergenic
CAATGCACACAATACTCAAT+GGG	0.505196	3:+40246457	MsG0380013540.01.T01:CDS
TTCAGTAGGGGTACTTGCTA+TGG	0.505440	3:-40245850	None:intergenic
CTCTTCGGAAGGAAGTGGGC+AGG	0.505993	3:+40246490	MsG0380013540.01.T01:CDS
CCAATGATGGGCCTATCGAC+AGG	0.508176	3:-40246974	None:intergenic
ATATATTTGATGAGGATTGT+TGG	0.511343	3:+40247925	MsG0380013540.01.T01:three_prime_UTR
CCAATGCAGTGCTGATTGCT+TGG	0.511818	3:+40247840	MsG0380013540.01.T01:three_prime_UTR
CCATTGAGTATTGTGTGCAT+TGG	0.512181	3:-40246456	None:intergenic
CTTCGGAAGGAAGTGGGCAG+GGG	0.512249	3:+40246492	MsG0380013540.01.T01:CDS
TGCTCCTCCTCCTAAGTGGT+GGG	0.512880	3:+40247036	MsG0380013540.01.T01:CDS
CATGACTCTTCGGAAGGAAG+TGG	0.514139	3:+40246485	MsG0380013540.01.T01:CDS
GATGCTTTCCGAATTTCAGT+AGG	0.514555	3:-40245864	None:intergenic
CTGTCGATAGGCCCATCATT+GGG	0.516223	3:+40246975	MsG0380013540.01.T01:CDS
CAACACGACGCCACGGACTG+TGG	0.521235	3:-40247747	None:intergenic
TCCTAACCAAAATTAAGTTC+AGG	0.524812	3:-40248024	None:intergenic
TCTTCGGAAGGAAGTGGGCA+GGG	0.526061	3:+40246491	MsG0380013540.01.T01:CDS
TATTTCATCCTGTGAGTCAT+CGG	0.528657	3:+40246589	MsG0380013540.01.T01:CDS
ATGCTCCTCCTCCTAAGTGG+TGG	0.530708	3:+40247035	MsG0380013540.01.T01:CDS
GAGAAGAAAGAAAATGGAGA+TGG	0.532138	3:+40246928	MsG0380013540.01.T01:CDS
TTAAAGATTAATAACCTGCT+AGG	0.536769	3:-40246065	None:intergenic
AGTGAATCTACCGTGGAAGA+AGG	0.537717	3:+40246863	MsG0380013540.01.T01:CDS
TCTACTTTGTTTCTGACCGA+AGG	0.540444	3:+40244616	MsG0380013540.01.T01:CDS
GTTCACAGGAAAGATATTTG+CGG	0.540461	3:+40247654	MsG0380013540.01.T01:intron
CTTATTCATTTCAGTCCCAT+CGG	0.540593	3:-40246528	None:intergenic
GAGTTGGCGGATTGAATGGT+TGG	0.541865	3:-40245989	None:intergenic
GTTCAGACCACACACCTAGC+AGG	0.546465	3:+40246051	MsG0380013540.01.T01:CDS
CCCATTTCAGTTGTGACAGG+TGG	0.548606	3:+40241848	MsG0380013540.01.T01:CDS
TCAGATATCTTCATTGGGGT+AGG	0.551648	3:-40246653	None:intergenic
TTCATTTCAGTCCCATCGGT+CGG	0.552448	3:-40246524	None:intergenic
ATGCTTTCCGAATTTCAGTA+GGG	0.554306	3:-40245863	None:intergenic
GGGAGCTATCATCCGACCGA+TGG	0.556557	3:+40246512	MsG0380013540.01.T01:CDS
TTCAGGACCAGAAAGTGAGC+TGG	0.559748	3:+40247180	MsG0380013540.01.T01:intron
ACCATAAGCCGATGACTCAC+AGG	0.559884	3:-40246597	None:intergenic
CCTCCTCCTAAGTGGTGGGA+TGG	0.560739	3:+40247040	MsG0380013540.01.T01:CDS
CCATTGCCATCCCACCACTT+AGG	0.560739	3:-40247046	None:intergenic
TCTGAAGGGATGCAAACTCC+TGG	0.562862	3:+40246671	MsG0380013540.01.T01:CDS
TCAGAAACAAAGTAGACAAA+CGG	0.567517	3:-40244609	None:intergenic
TGTATTGTATATATTTGATG+AGG	0.567911	3:+40247917	MsG0380013540.01.T01:three_prime_UTR
CGACGCCACGGACTGTGGAT+GGG	0.567931	3:-40247742	None:intergenic
CCTAAGTGGTGGGATGGCAA+TGG	0.569676	3:+40247046	MsG0380013540.01.T01:CDS
GTGTATCCAAATAACAGCCT+AGG	0.571499	3:+40246722	MsG0380013540.01.T01:CDS
ATGCTACGCCGTTCGAAGAG+AGG	0.575521	3:+40247204	MsG0380013540.01.T01:CDS
CAAATATATACAATACAAGT+GGG	0.576971	3:-40247911	None:intergenic
ACCCCAATGAAGATATCTGA+AGG	0.577653	3:+40246656	MsG0380013540.01.T01:CDS
CCATCCCACCACTTAGGAGG+AGG	0.578549	3:-40247040	None:intergenic
AGTATCACATTCAAAACGTA+CGG	0.579270	3:-40246564	None:intergenic
TTGGGATGGTTGCTGCACAT+TGG	0.584288	3:+40246993	MsG0380013540.01.T01:CDS
GGAGCTATCATCCGACCGAT+GGG	0.587580	3:+40246513	MsG0380013540.01.T01:CDS
GGCGTCGTGTTGATATCTAT+AGG	0.588523	3:+40247758	MsG0380013540.01.T01:exon
GTTCGAAGAGAGGTTGGAGA+AGG	0.592220	3:+40247214	MsG0380013540.01.T01:CDS
CGATAGGCCCATCATTGGGA+TGG	0.592976	3:+40246979	MsG0380013540.01.T01:CDS
AGCCAAGAACGAAACTTTGG+AGG	0.594708	3:-40245930	None:intergenic
TAGATATCAACACGACGCCA+CGG	0.596729	3:-40247754	None:intergenic
TACTGAAATTCGGAAAGCAT+CGG	0.598546	3:+40245866	MsG0380013540.01.T01:CDS
TTCTCCAACCTCTCTTCGAA+CGG	0.599277	3:-40247212	None:intergenic
TACCTCATAGAGTAATGAGA+TGG	0.599918	3:-40247787	None:intergenic
AGTCATCGGCTTATGGTGGA+TGG	0.599998	3:+40246603	MsG0380013540.01.T01:CDS
GCAGCAACCATCCCAATGAT+GGG	0.601660	3:-40246986	None:intergenic
CTGATGCTCCTCCTCCTAAG+TGG	0.601801	3:+40247032	MsG0380013540.01.T01:CDS
TCCAAATAACAGCCTAGGTG+AGG	0.601979	3:+40246727	MsG0380013540.01.T01:CDS
ACCTGTCACAACTGAAATGG+GGG	0.603132	3:-40241846	None:intergenic
CTCTAAGAGCAAGATACTTG+AGG	0.603618	3:+40246754	MsG0380013540.01.T01:CDS
TTGCCATCCCACCACTTAGG+AGG	0.606952	3:-40247043	None:intergenic
TACGCCGTTCGAAGAGAGGT+TGG	0.606989	3:+40247208	MsG0380013540.01.T01:CDS
CCCTTCAGATATCTTCATTG+GGG	0.615934	3:-40246657	None:intergenic
CCAGAATCGTTACTACATGA+AGG	0.617304	3:-40245906	None:intergenic
ATGACTCTTCGGAAGGAAGT+GGG	0.617710	3:+40246486	MsG0380013540.01.T01:CDS
TGCTTTCCGAATTTCAGTAG+GGG	0.618402	3:-40245862	None:intergenic
TTTGAAGTTGATTGTCTGTG+TGG	0.619707	3:+40241880	MsG0380013540.01.T01:CDS
CCCGCAAAACTCCTGTCGAT+AGG	0.624406	3:+40246963	MsG0380013540.01.T01:CDS
AGAAGACAAGCCTTCTTCCA+CGG	0.626278	3:-40246873	None:intergenic
TTCATCCCATCCACAGTCCG+TGG	0.627583	3:+40247737	MsG0380013540.01.T01:CDS
CCCCAATGAAGATATCTGAA+GGG	0.632021	3:+40246657	MsG0380013540.01.T01:CDS
GAATATCATGACTCTTCGGA+AGG	0.632054	3:+40246479	MsG0380013540.01.T01:CDS
CTTTGTAAAGCAGGATGATG+TGG	0.633113	3:+40244576	MsG0380013540.01.T01:CDS
TGCTGCACATTGGATTGAAG+AGG	0.634738	3:+40247003	MsG0380013540.01.T01:CDS
AGGATATTATCATCGCTCAA+AGG	0.635364	3:+40247246	MsG0380013540.01.T01:CDS
TGTGAGTCATCGGCTTATGG+TGG	0.636034	3:+40246599	MsG0380013540.01.T01:CDS
CACCTGTCACAACTGAAATG+GGG	0.636407	3:-40241847	None:intergenic
TTAATAACCTGCTAGGTGTG+TGG	0.641765	3:-40246058	None:intergenic
GTTGGAGAAGGCATTATCTG+AGG	0.647231	3:+40247226	MsG0380013540.01.T01:CDS
ATGGGACTGAAATGAATAAG+GGG	0.654668	3:+40246531	MsG0380013540.01.T01:CDS
GTTATTTGGATACACAAACT+GGG	0.662575	3:-40246714	None:intergenic
AGATAAAAGTGAATCTACCG+TGG	0.669633	3:+40246856	MsG0380013540.01.T01:CDS
TCTTAGAGACATCCTCACCT+AGG	0.675023	3:-40246739	None:intergenic
TGATAGGCAGCTTAAAGACG+AGG	0.694138	3:+40244805	MsG0380013540.01.T01:CDS
GGACTGAAATGAATAAGGGG+AGG	0.697836	3:+40246534	MsG0380013540.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AATACGTAAAAAAAAAAAAA+AGG	+	Chr3:40242337-40242356	MsG0380013540.01.T01:intron	10.0%
!!	AAAAAATTGTTAAATAGGAA+TGG	+	Chr3:40243377-40243396	MsG0380013540.01.T01:intron	15.0%
!!	AAAAATTGTTAAATAGGAAT+GGG	+	Chr3:40243378-40243397	MsG0380013540.01.T01:intron	15.0%
!!	AAACTTAATTCAATAATCAT+AGG	-	Chr3:40243228-40243247	None:intergenic	15.0%
!!	TACAAAAAATAAACAAGAAA+CGG	-	Chr3:40243125-40243144	None:intergenic	15.0%
!!	TCAAAAAAAAAAAATTAAGC+TGG	+	Chr3:40243640-40243659	MsG0380013540.01.T01:intron	15.0%
!!	TGAAAAGGTTATATTTAATA+TGG	-	Chr3:40246400-40246419	None:intergenic	15.0%
!!!	AAAGTATTTAATAGTTTTCA+TGG	+	Chr3:40244380-40244399	MsG0380013540.01.T01:intron	15.0%
!!!	AAGTATTTAATAGTTTTCAT+GGG	+	Chr3:40244381-40244400	MsG0380013540.01.T01:intron	15.0%
!!!	ATTTACTGAAATTTTAGTTT+TGG	+	Chr3:40243976-40243995	MsG0380013540.01.T01:intron	15.0%
!!!	GATTAATTTTATCGATTTAA+AGG	+	Chr3:40243475-40243494	MsG0380013540.01.T01:intron	15.0%
!!!	TAGTGTTTGAAATTTTATTT+AGG	+	Chr3:40244216-40244235	MsG0380013540.01.T01:intron	15.0%
!!!	TTAACCTTTTTTTTTTTGAA+AGG	+	Chr3:40246084-40246103	MsG0380013540.01.T01:intron	15.0%
!!!	TTGTTTTTTGAATTTGAATA+TGG	-	Chr3:40242808-40242827	None:intergenic	15.0%
!!!	TTTTAGGTTTTTTTTTTTGT+TGG	+	Chr3:40243734-40243753	MsG0380013540.01.T01:intron	15.0%
!!	AAAAAAAATTAAGCTGGATT+TGG	+	Chr3:40243646-40243665	MsG0380013540.01.T01:intron	20.0%
!!	AATAGACAAATGACTTAAAA+AGG	-	Chr3:40245737-40245756	None:intergenic	20.0%
!!	ATGAAATTGTGAAATGATAA+TGG	+	Chr3:40243501-40243520	MsG0380013540.01.T01:intron	20.0%
!!	ATTGCCTTTCAAAAAAAAAA+AGG	-	Chr3:40246091-40246110	None:intergenic	20.0%
!!	CAAATATATACAATACAAGT+GGG	-	Chr3:40247914-40247933	None:intergenic	20.0%
!!	TAATGAATTGAAAAATGGAT+CGG	-	Chr3:40242969-40242988	None:intergenic	20.0%
!!	TAGCAAAATAAATTTACCTT+CGG	-	Chr3:40244635-40244654	None:intergenic	20.0%
!!	TCAAATATATACAATACAAG+TGG	-	Chr3:40247915-40247934	None:intergenic	20.0%
!!	TGTATTGTATATATTTGATG+AGG	+	Chr3:40247917-40247936	MsG0380013540.01.T01:three_prime_UTR	20.0%
!!	TGTGGAAAAAATTGTTAAAT+AGG	+	Chr3:40243372-40243391	MsG0380013540.01.T01:intron	20.0%
!!!	AAAATTGGTGTTTTAGAAAA+TGG	+	Chr3:40246289-40246308	MsG0380013540.01.T01:intron	20.0%
!!!	AAAGAAATTAACTTCTGAAA+AGG	-	Chr3:40246415-40246434	None:intergenic	20.0%
!!!	AAATGTTAGTTTAATTAAGC+TGG	+	Chr3:40243421-40243440	MsG0380013540.01.T01:intron	20.0%
!!!	AATATCGTTTTAACTTTCAA+AGG	-	Chr3:40247315-40247334	None:intergenic	20.0%
!!!	ATCCATTTTTCAATTCATTA+TGG	+	Chr3:40242969-40242988	MsG0380013540.01.T01:intron	20.0%
!!!	ATTTTACCTGAACTTAATTT+TGG	+	Chr3:40248018-40248037	MsG0380013540.01.T01:three_prime_UTR	20.0%
!!!	GAAATTTGTTTATGAAATGA+TGG	+	Chr3:40243759-40243778	MsG0380013540.01.T01:intron	20.0%
!!!	TAGCTTTGTTATTGATTTAA+TGG	+	Chr3:40244134-40244153	MsG0380013540.01.T01:intron	20.0%
!!!	TAGGTTTGTTATTGATTTAA+AGG	+	Chr3:40243930-40243949	MsG0380013540.01.T01:intron	20.0%
!!!	TCCATTTTTCAATTCATTAT+GGG	+	Chr3:40242970-40242989	MsG0380013540.01.T01:intron	20.0%
!!!	TCTCTTTACTTTTTTAATGA+AGG	+	Chr3:40245397-40245416	MsG0380013540.01.T01:intron	20.0%
!!!	TTAAGTTTGTTTACATGATT+TGG	+	Chr3:40245788-40245807	MsG0380013540.01.T01:intron	20.0%
!!!	TTATTCGTACATATTTTAGT+CGG	+	Chr3:40242556-40242575	MsG0380013540.01.T01:intron	20.0%
!!!	TTCCCTTTTAGATTTTTTAA+GGG	+	Chr3:40246332-40246351	MsG0380013540.01.T01:intron	20.0%
!!!	TTTAGATAATTGAGTTTTTG+AGG	-	Chr3:40245555-40245574	None:intergenic	20.0%
!!!	TTTCCCTTTTAGATTTTTTA+AGG	+	Chr3:40246331-40246350	MsG0380013540.01.T01:intron	20.0%
!!!	TTTTTTGAAGAACCTAAATT+CGG	-	Chr3:40243628-40243647	None:intergenic	20.0%
!!!	TTTTTTTTTTCTTCCTGTTT+GGG	+	Chr3:40243673-40243692	MsG0380013540.01.T01:intron	20.0%
!!!	TTTTTTTTTTTCTTCCTGTT+TGG	+	Chr3:40243672-40243691	MsG0380013540.01.T01:intron	20.0%
!	AATGTTACCGTTTATGTTTA+TGG	+	Chr3:40245169-40245188	MsG0380013540.01.T01:intron	25.0%
!	ACCCATAATGAATTGAAAAA+TGG	-	Chr3:40242974-40242993	None:intergenic	25.0%
!	AGGATTATGAAATGTAATGA+TGG	+	Chr3:40243950-40243969	MsG0380013540.01.T01:intron	25.0%
!	ATATATTTGATGAGGATTGT+TGG	+	Chr3:40247925-40247944	MsG0380013540.01.T01:three_prime_UTR	25.0%
!	ATGATGAATTTGTAGATTTC+AGG	+	Chr3:40244074-40244093	MsG0380013540.01.T01:intron	25.0%
!	ATGCCCTTAAAAAATCTAAA+AGG	-	Chr3:40246338-40246357	None:intergenic	25.0%
!	ATTTGAATATGGAAATGATG+AGG	-	Chr3:40242797-40242816	None:intergenic	25.0%
!	CAAAAAACAATGTGAAGAAT+GGG	+	Chr3:40246013-40246032	MsG0380013540.01.T01:CDS	25.0%
!	GAAAACAATCAGCATTAATT+AGG	-	Chr3:40247163-40247182	None:intergenic	25.0%
!	GAAAGATAAAAAATAGCTTC+AGG	-	Chr3:40245073-40245092	None:intergenic	25.0%
!	GACATACTATATAGATATAC+AGG	-	Chr3:40245479-40245498	None:intergenic	25.0%
!	GATTATGAGTTACATTACAT+TGG	-	Chr3:40243094-40243113	None:intergenic	25.0%
!	GTTGAAATGATAGCTTAATT+CGG	+	Chr3:40243839-40243858	MsG0380013540.01.T01:intron	25.0%
!	TAATGAAGGTAGAAATTATC+TGG	+	Chr3:40245411-40245430	MsG0380013540.01.T01:intron	25.0%
!	TATATTTGATGAGGATTGTT+GGG	+	Chr3:40247926-40247945	MsG0380013540.01.T01:three_prime_UTR	25.0%
!	TCATACTTCTTTGTATTTGT+TGG	-	Chr3:40247086-40247105	None:intergenic	25.0%
!	TGCCCTTAAAAAATCTAAAA+GGG	-	Chr3:40246337-40246356	None:intergenic	25.0%
!	TGGTAAATTGCTTATGTATA+TGG	-	Chr3:40247483-40247502	None:intergenic	25.0%
!	TTAAAGATTAATAACCTGCT+AGG	-	Chr3:40246068-40246087	None:intergenic	25.0%
!	TTACAGATAAATGCACAATT+TGG	+	Chr3:40245349-40245368	MsG0380013540.01.T01:intron	25.0%
!!	AATTCCAAGAATTTTTGTTG+TGG	+	Chr3:40243354-40243373	MsG0380013540.01.T01:intron	25.0%
!!	AGTATTTTCACATTCATCAT+TGG	-	Chr3:40242373-40242392	None:intergenic	25.0%
!!	AGTTTAATTAAGCTGGATTT+TGG	+	Chr3:40243534-40243553	MsG0380013540.01.T01:intron	25.0%
!!	CTCAGTAATGTACTAATTTT+GGG	+	Chr3:40244707-40244726	MsG0380013540.01.T01:intron	25.0%
!!	GTTTAATTAAGCTGGATTTT+GGG	+	Chr3:40243535-40243554	MsG0380013540.01.T01:intron	25.0%
!!	TCAGTAATGTACTAATTTTG+GGG	+	Chr3:40244708-40244727	MsG0380013540.01.T01:intron	25.0%
!!	TCTCAGTAATGTACTAATTT+TGG	+	Chr3:40244706-40244725	MsG0380013540.01.T01:intron	25.0%
!!	TGCTTTAACTTAGTTAATGT+AGG	+	Chr3:40245230-40245249	MsG0380013540.01.T01:intron	25.0%
!!	TTGTATTTGTTGGTTGAATT+TGG	-	Chr3:40247076-40247095	None:intergenic	25.0%
!!	TTTTCCACAACAAAAATTCT+TGG	-	Chr3:40243361-40243380	None:intergenic	25.0%
!!	TTTTTGGATTTTGTGTGTTT+AGG	+	Chr3:40243911-40243930	MsG0380013540.01.T01:intron	25.0%
!!!	AAGTTATTTTTTGTTTAGCG+AGG	+	Chr3:40242068-40242087	MsG0380013540.01.T01:intron	25.0%
!!!	AATGGATTATGAAATGATGA+AGG	+	Chr3:40244152-40244171	MsG0380013540.01.T01:CDS	25.0%
!!!	AATTAATGCTGATTGTTTTC+AGG	+	Chr3:40247163-40247182	MsG0380013540.01.T01:intron	25.0%
!!!	CATTCTTCACATTGTTTTTT+GGG	-	Chr3:40246014-40246033	None:intergenic	25.0%
!!!	CTTTTACAGTTTTGATGTTA+TGG	+	Chr3:40244681-40244700	MsG0380013540.01.T01:intron	25.0%
!!!	GGGTTTAAATTTTGAAAAGA+GGG	+	Chr3:40244728-40244747	MsG0380013540.01.T01:intron	25.0%
!!!	GTTCTAGTTACTGAAATTTT+AGG	+	Chr3:40244344-40244363	MsG0380013540.01.T01:intron	25.0%
!!!	GTTCTGGTTTTTGATATTTT+AGG	+	Chr3:40243718-40243737	MsG0380013540.01.T01:intron	25.0%
!!!	TGTCTTTTTGATTTGTGATT+TGG	+	Chr3:40247632-40247651	MsG0380013540.01.T01:intron	25.0%
!!!	TTTTATTTAGGAGCTTTGTT+TGG	+	Chr3:40244228-40244247	MsG0380013540.01.T01:intron	25.0%
!!!	TTTTTAAGGGCATATCTTAT+GGG	+	Chr3:40246345-40246364	MsG0380013540.01.T01:intron	25.0%
!!!	TTTTTTAAGGGCATATCTTA+TGG	+	Chr3:40246344-40246363	MsG0380013540.01.T01:intron	25.0%
	AAATTCATCATCTCAAGAAG+GGG	-	Chr3:40244313-40244332	None:intergenic	30.0%
	AACAACCACACAATCAATTT+CGG	+	Chr3:40246157-40246176	MsG0380013540.01.T01:intron	30.0%
	AAGAGATTGCAGTTAAGTTA+TGG	-	Chr3:40245383-40245402	None:intergenic	30.0%
	AATGTGTTCCTCTTCAAAAT+TGG	+	Chr3:40246274-40246293	MsG0380013540.01.T01:intron	30.0%
	ACAAATTCATCATCTCAAGA+AGG	-	Chr3:40244315-40244334	None:intergenic	30.0%
	ACACAAGCACAAACTTAATA+TGG	+	Chr3:40242217-40242236	MsG0380013540.01.T01:intron	30.0%
	AGAAACCTGTATGATTTAGT+GGG	-	Chr3:40247604-40247623	None:intergenic	30.0%
	AGACTTCTAATTCTTTCACA+TGG	-	Chr3:40247126-40247145	None:intergenic	30.0%
	AGGAATTCAACGATACATAA+AGG	-	Chr3:40247407-40247426	None:intergenic	30.0%
	AGGATTGTTGGGTTAAATAT+TGG	+	Chr3:40247937-40247956	MsG0380013540.01.T01:three_prime_UTR	30.0%
	AGTATCACATTCAAAACGTA+CGG	-	Chr3:40246567-40246586	None:intergenic	30.0%
	ATACAATGTAGTGAGTATCA+AGG	-	Chr3:40245296-40245315	None:intergenic	30.0%
	ATATTAAGTTTGTGCTTGTG+TGG	-	Chr3:40242218-40242237	None:intergenic	30.0%
	CAAATTCATCATCTCAAGAA+GGG	-	Chr3:40244314-40244333	None:intergenic	30.0%
	CACTACGATAACATATACTA+TGG	+	Chr3:40242031-40242050	MsG0380013540.01.T01:intron	30.0%
	CATAGTATATGTTATCGTAG+TGG	-	Chr3:40242033-40242052	None:intergenic	30.0%
	CATCTTCATGAACATGATAT+TGG	+	Chr3:40241946-40241965	MsG0380013540.01.T01:CDS	30.0%
	CCAAAAAACAATGTGAAGAA+TGG	+	Chr3:40246012-40246031	MsG0380013540.01.T01:CDS	30.0%
	CTGTCTACCATAAACATAAA+CGG	-	Chr3:40245179-40245198	None:intergenic	30.0%
	CTTAATATGGAATTGGTGTA+AGG	+	Chr3:40242230-40242249	MsG0380013540.01.T01:intron	30.0%
	GAGAAATTGTGAAATGAGAA+TGG	+	Chr3:40243998-40244017	MsG0380013540.01.T01:intron	30.0%
	GCACAAACTTAATATGGAAT+TGG	+	Chr3:40242223-40242242	MsG0380013540.01.T01:intron	30.0%
	GGATTGTTGGGTTAAATATT+GGG	+	Chr3:40247938-40247957	MsG0380013540.01.T01:three_prime_UTR	30.0%
	GGTAAGTGTTATACTAATGA+TGG	-	Chr3:40245258-40245277	None:intergenic	30.0%
	GTACATTACATGCATTAAAC+AGG	-	Chr3:40246120-40246139	None:intergenic	30.0%
	GTCATGATAGGATTTAATGA+GGG	+	Chr3:40242176-40242195	MsG0380013540.01.T01:intron	30.0%
	GTTATTTGGATACACAAACT+GGG	-	Chr3:40246717-40246736	None:intergenic	30.0%
	TAAATCGATAACAAGCTATC+AGG	-	Chr3:40243329-40243348	None:intergenic	30.0%
	TAAGCCTTTCTTATACAAGA+TGG	-	Chr3:40246219-40246238	None:intergenic	30.0%
	TATGAAAAACCGGATAAAAC+CGG	-	Chr3:40242632-40242651	None:intergenic	30.0%
	TCAATTCAATACTTGAGAGT+TGG	-	Chr3:40245104-40245123	None:intergenic	30.0%
	TCAGAAACAAAGTAGACAAA+CGG	-	Chr3:40244612-40244631	None:intergenic	30.0%
	TCATGATAGGATTTAATGAG+GGG	+	Chr3:40242177-40242196	MsG0380013540.01.T01:intron	30.0%
	TCATTCTCATCAAAAGCAAT+TGG	-	Chr3:40247684-40247703	None:intergenic	30.0%
	TCCTAACCAAAATTAAGTTC+AGG	-	Chr3:40248027-40248046	None:intergenic	30.0%
	TCTTGTATAAGAAAGGCTTA+AGG	+	Chr3:40246219-40246238	MsG0380013540.01.T01:intron	30.0%
	TGTAATGTGTATTCGCAATT+CGG	+	Chr3:40244919-40244938	MsG0380013540.01.T01:intron	30.0%
	TGTCATGATAGGATTTAATG+AGG	+	Chr3:40242175-40242194	MsG0380013540.01.T01:intron	30.0%
	TGTTAAATAGGAATGGGAAT+GGG	+	Chr3:40243384-40243403	MsG0380013540.01.T01:intron	30.0%
	TTGTTAAATAGGAATGGGAA+TGG	+	Chr3:40243383-40243402	MsG0380013540.01.T01:intron	30.0%
!	ACAAGAGTTACTTTAAGAGA+TGG	+	Chr3:40242310-40242329	MsG0380013540.01.T01:intron	30.0%
!	AGAACTCTACTTGATAGTAT+TGG	+	Chr3:40245001-40245020	MsG0380013540.01.T01:intron	30.0%
!	ATACAAAGAAGTATGATCCT+TGG	+	Chr3:40247090-40247109	MsG0380013540.01.T01:intron	30.0%
!	CAAGAGTTACTTTAAGAGAT+GGG	+	Chr3:40242311-40242330	MsG0380013540.01.T01:intron	30.0%
!	CTTTAGTTTCTGTTTAAGTG+AGG	+	Chr3:40245139-40245158	MsG0380013540.01.T01:intron	30.0%
!	TAAAATAGCTGATGTTTTGC+TGG	+	Chr3:40245578-40245597	MsG0380013540.01.T01:intron	30.0%
!	TGTTATTTGGATACACAAAC+TGG	-	Chr3:40246718-40246737	None:intergenic	30.0%
!	TTCATTTTCATCATCACCTT+CGG	+	Chr3:40242933-40242952	MsG0380013540.01.T01:intron	30.0%
!	TTGGTAGCTAAAATGTTGAA+TGG	+	Chr3:40244247-40244266	MsG0380013540.01.T01:intron	30.0%
!!	AATTTGTAGATTTCAGGTTC+TGG	+	Chr3:40244080-40244099	MsG0380013540.01.T01:intron	30.0%
!!	ATGATGAATTTGTTGATTGC+GGG	+	Chr3:40243696-40243715	MsG0380013540.01.T01:intron	30.0%
!!	CATTGTATTTTTCGATCTCA+AGG	+	Chr3:40245308-40245327	MsG0380013540.01.T01:intron	30.0%
!!	CTAAAACACCAATTTTGAAG+AGG	-	Chr3:40246285-40246304	None:intergenic	30.0%
!!	GATGATGAATTTGTTGATTG+CGG	+	Chr3:40243695-40243714	MsG0380013540.01.T01:intron	30.0%
!!	GGGGTTTAAATTTTGAAAAG+AGG	+	Chr3:40244727-40244746	MsG0380013540.01.T01:intron	30.0%
!!	TTTTAAGGGCATATCTTATG+GGG	+	Chr3:40246346-40246365	MsG0380013540.01.T01:intron	30.0%
!!!	ACCTGAACTTAATTTTGGTT+AGG	+	Chr3:40248023-40248042	MsG0380013540.01.T01:three_prime_UTR	30.0%
!!!	ATGTTCGTTGTTGTTGTTTT+TGG	+	Chr3:40243895-40243914	MsG0380013540.01.T01:intron	30.0%
!!!	CCATTCTTCACATTGTTTTT+TGG	-	Chr3:40246015-40246034	None:intergenic	30.0%
!!!	GACTTAAAAAGGTGTTTTTG+AGG	-	Chr3:40245726-40245745	None:intergenic	30.0%
!!!	TATTTTTTGTTTAGCGAGGA+CGG	+	Chr3:40242072-40242091	MsG0380013540.01.T01:intron	30.0%
!!!	TGATTTGGTAAACATTTTGC+AGG	+	Chr3:40245803-40245822	MsG0380013540.01.T01:intron	30.0%
!!!	TTCTGGTTTCTGAAGTTTTA+TGG	+	Chr3:40244097-40244116	MsG0380013540.01.T01:intron	30.0%
!!!	TTTTGACTTTTTGATGTGAC+TGG	+	Chr3:40244541-40244560	MsG0380013540.01.T01:intron	30.0%
	AAGACAATGTGCATCGTAAT+GGG	+	Chr3:40244753-40244772	MsG0380013540.01.T01:CDS	35.0%
	AAGCTAGAGAATGTCATGAT+AGG	+	Chr3:40242164-40242183	MsG0380013540.01.T01:intron	35.0%
	ACAAATTCATCATCCCAAAC+AGG	-	Chr3:40243689-40243708	None:intergenic	35.0%
	AGAAATTATCTGGTTGTCCA+TGG	+	Chr3:40245421-40245440	MsG0380013540.01.T01:intron	35.0%
	AGAAGTTTGTACTTCTGATG+CGG	+	Chr3:40247336-40247355	MsG0380013540.01.T01:intron	35.0%
	AGATAAAAGTGAATCTACCG+TGG	+	Chr3:40246856-40246875	MsG0380013540.01.T01:CDS	35.0%
	AGGATATTATCATCGCTCAA+AGG	+	Chr3:40247246-40247265	MsG0380013540.01.T01:CDS	35.0%
	ATAGCTTCAGGTCATAATTC+TGG	-	Chr3:40245061-40245080	None:intergenic	35.0%
	ATCCCTTCAGATATCTTCAT+TGG	-	Chr3:40246662-40246681	None:intergenic	35.0%
	ATGCTTTCCGAATTTCAGTA+GGG	-	Chr3:40245866-40245885	None:intergenic	35.0%
	ATGGGAATATCATGACTCTT+CGG	+	Chr3:40246475-40246494	MsG0380013540.01.T01:CDS	35.0%
	ATGGGACTGAAATGAATAAG+GGG	+	Chr3:40246531-40246550	MsG0380013540.01.T01:CDS	35.0%
	ATTCAAGGAATGGTTGAAGA+AGG	+	Chr3:40242131-40242150	MsG0380013540.01.T01:intron	35.0%
	CAACGAACATAAGAACAAAG+AGG	-	Chr3:40243885-40243904	None:intergenic	35.0%
	CAATGCACACAATACTCAAT+GGG	+	Chr3:40246457-40246476	MsG0380013540.01.T01:CDS	35.0%
	CTTATTACTATTAGCGCGAT+GGG	+	Chr3:40246190-40246209	MsG0380013540.01.T01:intron	35.0%
	CTTATTCATTTCAGTCCCAT+CGG	-	Chr3:40246531-40246550	None:intergenic	35.0%
	GACACCATCTTGTATAAGAA+AGG	+	Chr3:40246212-40246231	MsG0380013540.01.T01:intron	35.0%
	GAGAAACCTGTATGATTTAG+TGG	-	Chr3:40247605-40247624	None:intergenic	35.0%
	GAGAAGAAAGAAAATGGAGA+TGG	+	Chr3:40246928-40246947	MsG0380013540.01.T01:CDS	35.0%
	GATCGGAAAAAAAAAACCGA+AGG	-	Chr3:40242952-40242971	None:intergenic	35.0%
	GATGGGACTGAAATGAATAA+GGG	+	Chr3:40246530-40246549	MsG0380013540.01.T01:CDS	35.0%
	GCACTCAATACAAAAGTAAG+TGG	-	Chr3:40247518-40247537	None:intergenic	35.0%
	GTGAAATACTGAAATGTGAG+TGG	+	Chr3:40243817-40243836	MsG0380013540.01.T01:intron	35.0%
	GTTCACAGGAAAGATATTTG+CGG	+	Chr3:40247654-40247673	MsG0380013540.01.T01:intron	35.0%
	TACCTCATAGAGTAATGAGA+TGG	-	Chr3:40247790-40247809	None:intergenic	35.0%
	TATTTCATCCTGTGAGTCAT+CGG	+	Chr3:40246589-40246608	MsG0380013540.01.T01:CDS	35.0%
	TCCCTTCAGATATCTTCATT+GGG	-	Chr3:40246661-40246680	None:intergenic	35.0%
	TCTTATTACTATTAGCGCGA+TGG	+	Chr3:40246189-40246208	MsG0380013540.01.T01:intron	35.0%
	TCTTCAATGATATGCTCTTC+TGG	+	Chr3:40242904-40242923	MsG0380013540.01.T01:intron	35.0%
	TGGGTTAAATATTGGGCATT+GGG	+	Chr3:40247945-40247964	MsG0380013540.01.T01:three_prime_UTR	35.0%
	TTAACAGAGTAAACAGTTCC+AGG	-	Chr3:40246692-40246711	None:intergenic	35.0%
	TTCATGAAGATGATATCGTC+TGG	-	Chr3:40241938-40241957	None:intergenic	35.0%
	TTCATGCATGTTTAGCTGTT+TGG	+	Chr3:40244879-40244898	MsG0380013540.01.T01:intron	35.0%
	TTGAATGGTTGGACATTAGT+TGG	-	Chr3:40245981-40246000	None:intergenic	35.0%
	TTGGGTTAAATATTGGGCAT+TGG	+	Chr3:40247944-40247963	MsG0380013540.01.T01:three_prime_UTR	35.0%
!	AGAAGAGCATATCATTGAAG+AGG	-	Chr3:40242905-40242924	None:intergenic	35.0%
!	GAAGAGGAACACATTTTCTT+AGG	-	Chr3:40246269-40246288	None:intergenic	35.0%
!	GAATTTGCTCTTTGTAAAGC+AGG	+	Chr3:40244567-40244586	MsG0380013540.01.T01:intron	35.0%
!	GTAAGTGGTCTTTTGTCAAA+TGG	-	Chr3:40247503-40247522	None:intergenic	35.0%
!	TACTGAAATTCGGAAAGCAT+CGG	+	Chr3:40245866-40245885	MsG0380013540.01.T01:CDS	35.0%
!	TTTGAAGTTGATTGTCTGTG+TGG	+	Chr3:40241880-40241899	MsG0380013540.01.T01:CDS	35.0%
!!	AATGGGAGAAATTTTGAGGA+GGG	+	Chr3:40244770-40244789	MsG0380013540.01.T01:CDS	35.0%
!!	AATTAAGCTGGATTTTGGGT+TGG	+	Chr3:40243539-40243558	MsG0380013540.01.T01:intron	35.0%
!!	ACATTACATTGGCTTTGTTG+TGG	-	Chr3:40243083-40243102	None:intergenic	35.0%
!!	ACGGTAGATTCACTTTTATC+TGG	-	Chr3:40246857-40246876	None:intergenic	35.0%
!!	AGTCTCGCGATTTTGATAAT+TGG	+	Chr3:40247577-40247596	MsG0380013540.01.T01:intron	35.0%
!!	ATTTTTCGATCTCAAGGTTC+TGG	+	Chr3:40245314-40245333	MsG0380013540.01.T01:intron	35.0%
!!	CTTCTGGTTGCTGAAATTTT+TGG	+	Chr3:40244436-40244455	MsG0380013540.01.T01:intron	35.0%
!!	TAATGGGAGAAATTTTGAGG+AGG	+	Chr3:40244769-40244788	MsG0380013540.01.T01:CDS	35.0%
!!	TAGTATTTTAAGCAGACAGC+CGG	+	Chr3:40242610-40242629	MsG0380013540.01.T01:intron	35.0%
!!	TCGTAATGGGAGAAATTTTG+AGG	+	Chr3:40244766-40244785	MsG0380013540.01.T01:CDS	35.0%
!!	TCTTGATTTTAGTGCAAGAG+CGG	+	Chr3:40242677-40242696	MsG0380013540.01.T01:intron	35.0%
!!	TGATTTGTGATTTGGTTCAC+AGG	+	Chr3:40247640-40247659	MsG0380013540.01.T01:intron	35.0%
!!!	TCACATTGTTTTTTGGGAGT+TGG	-	Chr3:40246008-40246027	None:intergenic	35.0%
!!!	TCGTACATATTTTAGTCGGT+GGG	+	Chr3:40242560-40242579	MsG0380013540.01.T01:intron	35.0%
!!!	TTCGTACATATTTTAGTCGG+TGG	+	Chr3:40242559-40242578	MsG0380013540.01.T01:intron	35.0%
	AACCACACAATCAATTTCGG+TGG	+	Chr3:40246160-40246179	MsG0380013540.01.T01:intron	40.0%
	AATAGGAATGGGAATGGGAA+TGG	+	Chr3:40243389-40243408	MsG0380013540.01.T01:intron	40.0%
	ACCCCAATGAAGATATCTGA+AGG	+	Chr3:40246656-40246675	MsG0380013540.01.T01:CDS	40.0%
	AGAAGCCAAGAACGAAACTT+TGG	-	Chr3:40245936-40245955	None:intergenic	40.0%
	AGGCTTGGATCAAGTTTCAA+AGG	+	Chr3:40242250-40242269	MsG0380013540.01.T01:intron	40.0%
	ATACACCACAAATCTTAGCC+AGG	-	Chr3:40245453-40245472	None:intergenic	40.0%
	ATCACGGATCAGCCATATAT+GGG	-	Chr3:40241906-40241925	None:intergenic	40.0%
	ATCCACCGAAATTGATTGTG+TGG	-	Chr3:40246165-40246184	None:intergenic	40.0%
	ATCTTCATTGGGGTAGGATT+TGG	-	Chr3:40246650-40246669	None:intergenic	40.0%
	ATGCATGTTTAGCTGTTTGG+AGG	+	Chr3:40244882-40244901	MsG0380013540.01.T01:intron	40.0%
	CAAGTACCCCTACTGAAATT+CGG	+	Chr3:40245856-40245875	MsG0380013540.01.T01:CDS	40.0%
	CACATGGAAAATAGCTACCA+AGG	-	Chr3:40247110-40247129	None:intergenic	40.0%
	CACTGACACTTCTTGGATTA+GGG	+	Chr3:40243165-40243184	MsG0380013540.01.T01:intron	40.0%
	CCAATGCACACAATACTCAA+TGG	+	Chr3:40246456-40246475	MsG0380013540.01.T01:CDS	40.0%
	CCAGAATCGTTACTACATGA+AGG	-	Chr3:40245909-40245928	None:intergenic	40.0%
	CCCCAATGAAGATATCTGAA+GGG	+	Chr3:40246657-40246676	MsG0380013540.01.T01:CDS	40.0%
	CCCTTCAGATATCTTCATTG+GGG	-	Chr3:40246660-40246679	None:intergenic	40.0%
	CCTTCATGTAGTAACGATTC+TGG	+	Chr3:40245906-40245925	MsG0380013540.01.T01:CDS	40.0%
	CGAAGATGTCTCATTGAGAA+TGG	+	Chr3:40245035-40245054	MsG0380013540.01.T01:intron	40.0%
	CGATGGGACTGAAATGAATA+AGG	+	Chr3:40246529-40246548	MsG0380013540.01.T01:CDS	40.0%
	CGTAGTGGCAACTTGAAAAA+AGG	-	Chr3:40242018-40242037	None:intergenic	40.0%
	CTTTGTAAAGCAGGATGATG+TGG	+	Chr3:40244576-40244595	MsG0380013540.01.T01:CDS	40.0%
	GAACACGAAAGCAAGTGAAA+AGG	-	Chr3:40242999-40243018	None:intergenic	40.0%
	GAAGAACCTAAATTCGGACA+GGG	-	Chr3:40243622-40243641	None:intergenic	40.0%
	GAAGACAATGTGCATCGTAA+TGG	+	Chr3:40244752-40244771	MsG0380013540.01.T01:CDS	40.0%
	GAATATCATGACTCTTCGGA+AGG	+	Chr3:40246479-40246498	MsG0380013540.01.T01:CDS	40.0%
	GATATAAGGCTAAGACACTG+AGG	+	Chr3:40244955-40244974	MsG0380013540.01.T01:intron	40.0%
	GATGCTTTCCGAATTTCAGT+AGG	-	Chr3:40245867-40245886	None:intergenic	40.0%
	GCAAACAACAGTGCTTTCAT+AGG	-	Chr3:40247276-40247295	None:intergenic	40.0%
	GGAGGAGAGAAGAAAGAAAA+TGG	+	Chr3:40246922-40246941	MsG0380013540.01.T01:CDS	40.0%
	GTCCATCTCATTACTCTATG+AGG	+	Chr3:40247785-40247804	MsG0380013540.01.T01:three_prime_UTR	40.0%
	GTGTATCCAAATAACAGCCT+AGG	+	Chr3:40246722-40246741	MsG0380013540.01.T01:CDS	40.0%
	GTTGAGATGATCGCTTCATT+CGG	+	Chr3:40244269-40244288	MsG0380013540.01.T01:intron	40.0%
	TACAAGCATATGCATGTCCT+GGG	+	Chr3:40245506-40245525	MsG0380013540.01.T01:intron	40.0%
	TATATGGCTGATCCGTGATA+TGG	+	Chr3:40241907-40241926	MsG0380013540.01.T01:CDS	40.0%
	TATCACGGATCAGCCATATA+TGG	-	Chr3:40241907-40241926	None:intergenic	40.0%
	TATGGAATTGGTGTAAGGCT+TGG	+	Chr3:40242235-40242254	MsG0380013540.01.T01:intron	40.0%
	TCAACCATTCCTTGAATCGT+TGG	-	Chr3:40242128-40242147	None:intergenic	40.0%
	TCAAGGCTTTCTTAGTATCG+TGG	-	Chr3:40245279-40245298	None:intergenic	40.0%
	TCAGATATCTTCATTGGGGT+AGG	-	Chr3:40246656-40246675	None:intergenic	40.0%
	TCCTCCAAAATAACAGATGC+AGG	-	Chr3:40246908-40246927	None:intergenic	40.0%
	TGAAGAACCTAAATTCGGAC+AGG	-	Chr3:40243623-40243642	None:intergenic	40.0%
	TGCTTTCCGAATTTCAGTAG+GGG	-	Chr3:40245865-40245884	None:intergenic	40.0%
	TGTGTGAGAGAAAGAAAGAG+AGG	-	Chr3:40242744-40242763	None:intergenic	40.0%
	TTAATAACCTGCTAGGTGTG+TGG	-	Chr3:40246061-40246080	None:intergenic	40.0%
	TTCAACGTCATGCTAAACTC+AGG	-	Chr3:40247427-40247446	None:intergenic	40.0%
	TTCTGAGTATGTTCTGCTTC+TGG	+	Chr3:40244420-40244439	MsG0380013540.01.T01:intron	40.0%
	TTGGTCCCACTAAATCATAC+AGG	+	Chr3:40247596-40247615	MsG0380013540.01.T01:intron	40.0%
!	AATAGCTGATGTTTTGCTGG+TGG	+	Chr3:40245581-40245600	MsG0380013540.01.T01:intron	40.0%
!	ACTGACACTTCTTGGATTAG+GGG	+	Chr3:40243166-40243185	MsG0380013540.01.T01:intron	40.0%
!	CATTGAAGAAGTAAGCACTG+TGG	-	Chr3:40245202-40245221	None:intergenic	40.0%
!	CCATTGAGTATTGTGTGCAT+TGG	-	Chr3:40246459-40246478	None:intergenic	40.0%
!	CGTCTGGATTTTCCATATCA+CGG	-	Chr3:40241922-40241941	None:intergenic	40.0%
!	CTCTAAGAGCAAGATACTTG+AGG	+	Chr3:40246754-40246773	MsG0380013540.01.T01:CDS	40.0%
!!	AATATTGGGCATTGGGAGAT+CGG	+	Chr3:40247952-40247971	MsG0380013540.01.T01:three_prime_UTR	40.0%
!!	AATTTGTTGATTGCGGGTTC+TGG	+	Chr3:40243702-40243721	MsG0380013540.01.T01:intron	40.0%
!!	CAGTGTCTTAGCCTTATATC+AGG	-	Chr3:40244955-40244974	None:intergenic	40.0%
!!	CTTGATTTTAGTGCAAGAGC+GGG	+	Chr3:40242678-40242697	MsG0380013540.01.T01:intron	40.0%
!!	GAAGCCTGCATCTGTTATTT+TGG	+	Chr3:40246901-40246920	MsG0380013540.01.T01:CDS	40.0%
!!	TATGAAGCACTGACACTTCT+TGG	+	Chr3:40243158-40243177	MsG0380013540.01.T01:intron	40.0%
!!	TCTACTTTGTTTCTGACCGA+AGG	+	Chr3:40244616-40244635	MsG0380013540.01.T01:CDS	40.0%
!!!	CATTGTTTTTTGGGAGTTGG+CGG	-	Chr3:40246005-40246024	None:intergenic	40.0%
	AAGACAAAAAGCCGTGAACC+GGG	-	Chr3:40242661-40242680	None:intergenic	45.0%
	ACCTGTCACAACTGAAATGG+GGG	-	Chr3:40241849-40241868	None:intergenic	45.0%
	AGAAGACAAGCCTTCTTCCA+CGG	-	Chr3:40246876-40246895	None:intergenic	45.0%
	AGCACTGCATTGGGACTTAA+TGG	-	Chr3:40247833-40247852	None:intergenic	45.0%
	AGCCAAGAACGAAACTTTGG+AGG	-	Chr3:40245933-40245952	None:intergenic	45.0%
	AGGGATCACAGAGTGATGAT+AGG	+	Chr3:40244789-40244808	MsG0380013540.01.T01:CDS	45.0%
	AGTGAATCTACCGTGGAAGA+AGG	+	Chr3:40246863-40246882	MsG0380013540.01.T01:CDS	45.0%
	AGTTGTGACAGGTGGAAAGA+AGG	+	Chr3:40241856-40241875	MsG0380013540.01.T01:CDS	45.0%
	ATCTTCCTTGAATCTTGCGC+AGG	-	Chr3:40246794-40246813	None:intergenic	45.0%
	ATGACTCTTCGGAAGGAAGT+GGG	+	Chr3:40246486-40246505	MsG0380013540.01.T01:CDS	45.0%
	ATGTTCCTGCGCAAGATTCA+AGG	+	Chr3:40246786-40246805	MsG0380013540.01.T01:CDS	45.0%
	CAAAGTCACAGACACTGACA+CGG	-	Chr3:40243306-40243325	None:intergenic	45.0%
	CAAGACAAAAAGCCGTGAAC+CGG	-	Chr3:40242662-40242681	None:intergenic	45.0%
	CAAGCAATCAGCACTGCATT+GGG	-	Chr3:40247842-40247861	None:intergenic	45.0%
	CAAGGAATGGTTGAAGAAGG+AGG	+	Chr3:40242134-40242153	MsG0380013540.01.T01:intron	45.0%
	CACCAGGAACTTATGAACAG+TGG	-	Chr3:40242105-40242124	None:intergenic	45.0%
	CACCTGTCACAACTGAAATG+GGG	-	Chr3:40241850-40241869	None:intergenic	45.0%
	CATTCTCCCTGTCCGAATTT+AGG	+	Chr3:40243613-40243632	MsG0380013540.01.T01:intron	45.0%
	CCACCTGTCACAACTGAAAT+GGG	-	Chr3:40241851-40241870	None:intergenic	45.0%
	CGGGGGAAGATATGAAAAAC+CGG	-	Chr3:40242642-40242661	None:intergenic	45.0%
	CTAAATTCGGACAGGGAGAA+TGG	-	Chr3:40243615-40243634	None:intergenic	45.0%
	CTACAAGCATATGCATGTCC+TGG	+	Chr3:40245505-40245524	MsG0380013540.01.T01:intron	45.0%
	CTGACCTACCTTCTTCACTT+GGG	+	Chr3:40242878-40242897	MsG0380013540.01.T01:intron	45.0%
	GAATGGATCCTAAGACCTTG+AGG	-	Chr3:40243598-40243617	None:intergenic	45.0%
	GAGCAAGATACTTGAGGAAG+AGG	+	Chr3:40246760-40246779	MsG0380013540.01.T01:CDS	45.0%
	GCATTCCTGGCTAAGATTTG+TGG	+	Chr3:40245445-40245464	MsG0380013540.01.T01:intron	45.0%
	GCCATTTCGCTCCTGATATA+AGG	+	Chr3:40244941-40244960	MsG0380013540.01.T01:intron	45.0%
	GCCTTATATCAGGAGCGAAA+TGG	-	Chr3:40244945-40244964	None:intergenic	45.0%
	GGAACTTATGAACAGTGGCA+TGG	-	Chr3:40242100-40242119	None:intergenic	45.0%
	GGACTGAAATGAATAAGGGG+AGG	+	Chr3:40246534-40246553	MsG0380013540.01.T01:CDS	45.0%
	GTCCTCCAAAGTTTCGTTCT+TGG	+	Chr3:40245928-40245947	MsG0380013540.01.T01:CDS	45.0%
	TAGATATCAACACGACGCCA+CGG	-	Chr3:40247757-40247776	None:intergenic	45.0%
	TCCAAATAACAGCCTAGGTG+AGG	+	Chr3:40246727-40246746	MsG0380013540.01.T01:CDS	45.0%
	TCCACCTGTCACAACTGAAA+TGG	-	Chr3:40241852-40241871	None:intergenic	45.0%
	TCCTCACCTAGGCTGTTATT+TGG	-	Chr3:40246731-40246750	None:intergenic	45.0%
	TCTTAGAGACATCCTCACCT+AGG	-	Chr3:40246742-40246761	None:intergenic	45.0%
	TGATAGGCAGCTTAAAGACG+AGG	+	Chr3:40244805-40244824	MsG0380013540.01.T01:CDS	45.0%
	TGCCACTGTTCATAAGTTCC+TGG	+	Chr3:40242100-40242119	MsG0380013540.01.T01:intron	45.0%
	TGCTGCACATTGGATTGAAG+AGG	+	Chr3:40247003-40247022	MsG0380013540.01.T01:CDS	45.0%
	TGGAAGAAGGCTTGTCTTCT+TGG	+	Chr3:40246876-40246895	MsG0380013540.01.T01:CDS	45.0%
	TTCATTTCAGTCCCATCGGT+CGG	-	Chr3:40246527-40246546	None:intergenic	45.0%
	TTCTCCAACCTCTCTTCGAA+CGG	-	Chr3:40247215-40247234	None:intergenic	45.0%
	TTGTCTGTGTGGCCCATATA+TGG	+	Chr3:40241891-40241910	MsG0380013540.01.T01:CDS	45.0%
!	AGAAAGAGAGAGAGTGTGTG+AGG	-	Chr3:40242770-40242789	None:intergenic	45.0%
!	ATCTCAAGGTTCTGGCAGTA+GGG	+	Chr3:40245322-40245341	MsG0380013540.01.T01:intron	45.0%
!	CGGTTTTTCATATCTTCCCC+CGG	+	Chr3:40242640-40242659	MsG0380013540.01.T01:intron	45.0%
!	GCACTGACACTTCTTGGATT+AGG	+	Chr3:40243164-40243183	MsG0380013540.01.T01:intron	45.0%
!	GGCGTCGTGTTGATATCTAT+AGG	+	Chr3:40247758-40247777	MsG0380013540.01.T01:exon	45.0%
!!	GTTGGAGAAGGCATTATCTG+AGG	+	Chr3:40247226-40247245	MsG0380013540.01.T01:CDS	45.0%
!!	TTCAGTAGGGGTACTTGCTA+TGG	-	Chr3:40245853-40245872	None:intergenic	45.0%
!!!	GCCTGCATCTGTTATTTTGG+AGG	+	Chr3:40246904-40246923	MsG0380013540.01.T01:CDS	45.0%
!!!	GGATTTTGGGTTGGTGGTAT+TGG	+	Chr3:40243548-40243567	MsG0380013540.01.T01:intron	45.0%
!!!	TAAGCTGGATTTTGGGTTGG+TGG	+	Chr3:40243542-40243561	MsG0380013540.01.T01:intron	45.0%
	AAAAGTTTGTGAGCCAGCCC+AGG	-	Chr3:40245526-40245545	None:intergenic	50.0%
	ACCATAAGCCGATGACTCAC+AGG	-	Chr3:40246600-40246619	None:intergenic	50.0%
	ACCCCCATTTCAGTTGTGAC+AGG	+	Chr3:40241845-40241864	MsG0380013540.01.T01:CDS	50.0%
	AGACAAAAAGCCGTGAACCG+GGG	-	Chr3:40242660-40242679	None:intergenic	50.0%
	AGGACCCAAGTGAAGAAGGT+AGG	-	Chr3:40242885-40242904	None:intergenic	50.0%
	CATGACTCTTCGGAAGGAAG+TGG	+	Chr3:40246485-40246504	MsG0380013540.01.T01:CDS	50.0%
	CCAAGCAATCAGCACTGCAT+TGG	-	Chr3:40247843-40247862	None:intergenic	50.0%
	CCAAGTGAAGAAGGTAGGTC+AGG	-	Chr3:40242880-40242899	None:intergenic	50.0%
	CCCATTTCAGTTGTGACAGG+TGG	+	Chr3:40241848-40241867	MsG0380013540.01.T01:CDS	50.0%
	CCTGACCTACCTTCTTCACT+TGG	+	Chr3:40242877-40242896	MsG0380013540.01.T01:intron	50.0%
	CTGTCGATAGGCCCATCATT+GGG	+	Chr3:40246975-40246994	MsG0380013540.01.T01:CDS	50.0%
	GAAGAGGACCCAAGTGAAGA+AGG	-	Chr3:40242889-40242908	None:intergenic	50.0%
	GCAGCAACCATCCCAATGAT+GGG	-	Chr3:40246989-40247008	None:intergenic	50.0%
	GGTGCCAACGATTCAAGGAA+TGG	+	Chr3:40242121-40242140	MsG0380013540.01.T01:intron	50.0%
	GTTCGAAGAGAGGTTGGAGA+AGG	+	Chr3:40247214-40247233	MsG0380013540.01.T01:CDS	50.0%
	TAGCATGCCAGCTCACTTTC+TGG	-	Chr3:40247190-40247209	None:intergenic	50.0%
	TCATATCTTCCCCCGGTTCA+CGG	+	Chr3:40242647-40242666	MsG0380013540.01.T01:intron	50.0%
	TCTGAAGGGATGCAAACTCC+TGG	+	Chr3:40246671-40246690	MsG0380013540.01.T01:CDS	50.0%
	TCTTAGCCAGGAATGCACCA+TGG	-	Chr3:40245441-40245460	None:intergenic	50.0%
	TGCAGCAACCATCCCAATGA+TGG	-	Chr3:40246990-40247009	None:intergenic	50.0%
	TGGATCCTAAGACCTTGAGG+AGG	-	Chr3:40243595-40243614	None:intergenic	50.0%
	TTCAGGACCAGAAAGTGAGC+TGG	+	Chr3:40247180-40247199	MsG0380013540.01.T01:intron	50.0%
	TTCCTTGAATCGTTGGCACC+AGG	-	Chr3:40242121-40242140	None:intergenic	50.0%
	TTGGGATGGTTGCTGCACAT+TGG	+	Chr3:40246993-40247012	MsG0380013540.01.T01:CDS	50.0%
!	CCTATCGACAGGAGTTTTGC+GGG	-	Chr3:40246966-40246985	None:intergenic	50.0%
!	GATCTCAAGGTTCTGGCAGT+AGG	+	Chr3:40245321-40245340	MsG0380013540.01.T01:intron	50.0%
!	GCCTATCGACAGGAGTTTTG+CGG	-	Chr3:40246967-40246986	None:intergenic	50.0%
!	GCTGATGTTTTGCTGGTGGA+AGG	+	Chr3:40245585-40245604	MsG0380013540.01.T01:intron	50.0%
!	TTCCTGGTGCCAACGATTCA+AGG	+	Chr3:40242116-40242135	MsG0380013540.01.T01:intron	50.0%
!!	AGCAGACAGCCGGTTTTATC+CGG	+	Chr3:40242620-40242639	MsG0380013540.01.T01:intron	50.0%
!!	AGTCATCGGCTTATGGTGGA+TGG	+	Chr3:40246603-40246622	MsG0380013540.01.T01:CDS	50.0%
!!	CCAATGCAGTGCTGATTGCT+TGG	+	Chr3:40247840-40247859	MsG0380013540.01.T01:three_prime_UTR	50.0%
!!	GAGTTGGCGGATTGAATGGT+TGG	-	Chr3:40245992-40246011	None:intergenic	50.0%
!!	TCCTGTGAGTCATCGGCTTA+TGG	+	Chr3:40246596-40246615	MsG0380013540.01.T01:CDS	50.0%
!!	TGGGTTGGTGGTATTGGCTT+GGG	+	Chr3:40243554-40243573	MsG0380013540.01.T01:intron	50.0%
!!	TGTGAGTCATCGGCTTATGG+TGG	+	Chr3:40246599-40246618	MsG0380013540.01.T01:CDS	50.0%
!!	TTGGGAGTTGGCGGATTGAA+TGG	-	Chr3:40245996-40246015	None:intergenic	50.0%
!!	TTGGGTTGGTGGTATTGGCT+TGG	+	Chr3:40243553-40243572	MsG0380013540.01.T01:intron	50.0%
	ACACGGCACAGACACTGACA+CGG	-	Chr3:40243289-40243308	None:intergenic	55.0%
	AGCATATGCATGTCCTGGGC+TGG	+	Chr3:40245510-40245529	MsG0380013540.01.T01:intron	55.0%
	ATGCTACGCCGTTCGAAGAG+AGG	+	Chr3:40247204-40247223	MsG0380013540.01.T01:CDS	55.0%
	ATGCTCCTCCTCCTAAGTGG+TGG	+	Chr3:40247035-40247054	MsG0380013540.01.T01:CDS	55.0%
	CCATTGCCATCCCACCACTT+AGG	-	Chr3:40247049-40247068	None:intergenic	55.0%
	CCCGCAAAACTCCTGTCGAT+AGG	+	Chr3:40246963-40246982	MsG0380013540.01.T01:CDS	55.0%
	CCTGTCGATAGGCCCATCAT+TGG	+	Chr3:40246974-40246993	MsG0380013540.01.T01:CDS	55.0%
	CGATAGGCCCATCATTGGGA+TGG	+	Chr3:40246979-40246998	MsG0380013540.01.T01:CDS	55.0%
	CTGATGCTCCTCCTCCTAAG+TGG	+	Chr3:40247032-40247051	MsG0380013540.01.T01:CDS	55.0%
	GACAAAAAGCCGTGAACCGG+GGG	-	Chr3:40242659-40242678	None:intergenic	55.0%
	GGAGCTATCATCCGACCGAT+GGG	+	Chr3:40246513-40246532	MsG0380013540.01.T01:CDS	55.0%
	GGTTGTCCATGGTGCATTCC+TGG	+	Chr3:40245432-40245451	MsG0380013540.01.T01:intron	55.0%
	GTGCTCCTCCTCAAGGTCTT+AGG	+	Chr3:40243587-40243606	MsG0380013540.01.T01:intron	55.0%
	GTTCAGACCACACACCTAGC+AGG	+	Chr3:40246051-40246070	MsG0380013540.01.T01:CDS	55.0%
	TACGCCGTTCGAAGAGAGGT+TGG	+	Chr3:40247208-40247227	MsG0380013540.01.T01:CDS	55.0%
	TCTTCGGAAGGAAGTGGGCA+GGG	+	Chr3:40246491-40246510	MsG0380013540.01.T01:CDS	55.0%
	TGCTCCTCCTCCTAAGTGGT+GGG	+	Chr3:40247036-40247055	MsG0380013540.01.T01:CDS	55.0%
	TTCATCCCATCCACAGTCCG+TGG	+	Chr3:40247737-40247756	MsG0380013540.01.T01:CDS	55.0%
	TTGCCATCCCACCACTTAGG+AGG	-	Chr3:40247046-40247065	None:intergenic	55.0%
!	CCTAAGTGGTGGGATGGCAA+TGG	+	Chr3:40247046-40247065	MsG0380013540.01.T01:CDS	55.0%
!	GCTTTGTTGTGGTGCCGAGA+CGG	-	Chr3:40243072-40243091	None:intergenic	55.0%
!!	CCAATGATGGGCCTATCGAC+AGG	-	Chr3:40246977-40246996	None:intergenic	55.0%
!!	GTGGTATTGGCTTGGGACCT+GGG	+	Chr3:40243561-40243580	MsG0380013540.01.T01:intron	55.0%
	CCATCCCACCACTTAGGAGG+AGG	-	Chr3:40247043-40247062	None:intergenic	60.0%
	CTCTTCGGAAGGAAGTGGGC+AGG	+	Chr3:40246490-40246509	MsG0380013540.01.T01:CDS	60.0%
	CTTCGGAAGGAAGTGGGCAG+GGG	+	Chr3:40246492-40246511	MsG0380013540.01.T01:CDS	60.0%
	GGGAGCTATCATCCGACCGA+TGG	+	Chr3:40246512-40246531	MsG0380013540.01.T01:CDS	60.0%
	TTTAGTCGGTGGGACCCGTG+CGG	+	Chr3:40242570-40242589	MsG0380013540.01.T01:intron	60.0%
!	CCTCCTCCTAAGTGGTGGGA+TGG	+	Chr3:40247040-40247059	MsG0380013540.01.T01:CDS	60.0%
!	GTTGTGGTGCCGAGACGGTA+CGG	-	Chr3:40243067-40243086	None:intergenic	60.0%
!	TGGGAGTGTGCTCCTCCTCA+AGG	+	Chr3:40243580-40243599	MsG0380013540.01.T01:intron	60.0%
!	TTGAGGAGGAGCACACTCCC+AGG	-	Chr3:40243581-40243600	None:intergenic	60.0%
!!	GGTGGTATTGGCTTGGGACC+TGG	+	Chr3:40243560-40243579	MsG0380013540.01.T01:intron	60.0%
	CATCGACCTGTGCTCCGCAC+GGG	-	Chr3:40242587-40242606	None:intergenic	65.0%
	CCATCGACCTGTGCTCCGCA+CGG	-	Chr3:40242588-40242607	None:intergenic	65.0%
!	ACGACGCCACGGACTGTGGA+TGG	-	Chr3:40247746-40247765	None:intergenic	65.0%
!	CAACACGACGCCACGGACTG+TGG	-	Chr3:40247750-40247769	None:intergenic	65.0%
!	CGACGCCACGGACTGTGGAT+GGG	-	Chr3:40247745-40247764	None:intergenic	65.0%
	CCGTGCGGAGCACAGGTCGA+TGG	+	Chr3:40242585-40242604	MsG0380013540.01.T01:intron	70.0%
!	CGGCGGCGGATTTAGCGTGG+TGG	-	Chr3:40243035-40243054	None:intergenic	70.0%
!	GTGGTGCCGAGACGGTACGG+CGG	-	Chr3:40243064-40243083	None:intergenic	70.0%
!	TGGCGGCGGCGGATTTAGCG+TGG	-	Chr3:40243038-40243057	None:intergenic	70.0%
	AGACGGTACGGCGGCGGTGG+CGG	-	Chr3:40243055-40243074	None:intergenic	75.0%
	CCACCGCCGCCGTACCGTCT+CGG	+	Chr3:40243055-40243074	MsG0380013540.01.T01:intron	75.0%
	GTGCCGAGACGGTACGGCGG+CGG	-	Chr3:40243061-40243080	None:intergenic	75.0%
	GTGGGACCCGTGCGGAGCAC+AGG	+	Chr3:40242578-40242597	MsG0380013540.01.T01:intron	75.0%
!	CCGAGACGGTACGGCGGCGG+TGG	-	Chr3:40243058-40243077	None:intergenic	80.0%
!!	CGGTACGGCGGCGGTGGCGG+CGG	-	Chr3:40243052-40243071	None:intergenic	85.0%
!!	TACGGCGGCGGTGGCGGCGG+CGG	-	Chr3:40243049-40243068	None:intergenic	85.0%

Chromosome	Type	Strat	End	Strand	Name
Chr3	gene	40241830	40248072	40241830	ID=MsG0380013540.01;Name=MsG0380013540.01
Chr3	mRNA	40241830	40248072	40241830	ID=MsG0380013540.01.T01;Parent=MsG0380013540.01;Name=MsG0380013540.01.T01;_AED=0.40;_eAED=0.42;_QI=0\|0.71\|0.62\|1\|0.71\|0.75\|8\|302\|490
Chr3	exon	40241830	40241999	40241830	ID=MsG0380013540.01.T01:exon:490;Parent=MsG0380013540.01.T01
Chr3	exon	40244137	40244197	40244137	ID=MsG0380013540.01.T01:exon:491;Parent=MsG0380013540.01.T01
Chr3	exon	40244568	40244637	40244568	ID=MsG0380013540.01.T01:exon:492;Parent=MsG0380013540.01.T01
Chr3	exon	40244747	40244826	40244747	ID=MsG0380013540.01.T01:exon:493;Parent=MsG0380013540.01.T01
Chr3	exon	40245825	40246072	40245825	ID=MsG0380013540.01.T01:exon:494;Parent=MsG0380013540.01.T01
Chr3	exon	40246448	40247099	40246448	ID=MsG0380013540.01.T01:exon:495;Parent=MsG0380013540.01.T01
Chr3	exon	40247185	40247267	40247185	ID=MsG0380013540.01.T01:exon:496;Parent=MsG0380013540.01.T01
Chr3	exon	40247662	40248072	40247662	ID=MsG0380013540.01.T01:exon:497;Parent=MsG0380013540.01.T01
Chr3	CDS	40241830	40241999	40241830	ID=MsG0380013540.01.T01:cds;Parent=MsG0380013540.01.T01
Chr3	CDS	40244137	40244197	40244137	ID=MsG0380013540.01.T01:cds;Parent=MsG0380013540.01.T01
Chr3	CDS	40244568	40244637	40244568	ID=MsG0380013540.01.T01:cds;Parent=MsG0380013540.01.T01
Chr3	CDS	40244747	40244826	40244747	ID=MsG0380013540.01.T01:cds;Parent=MsG0380013540.01.T01
Chr3	CDS	40245825	40246072	40245825	ID=MsG0380013540.01.T01:cds;Parent=MsG0380013540.01.T01
Chr3	CDS	40246448	40247099	40246448	ID=MsG0380013540.01.T01:cds;Parent=MsG0380013540.01.T01
Chr3	CDS	40247185	40247267	40247185	ID=MsG0380013540.01.T01:cds;Parent=MsG0380013540.01.T01
Chr3	CDS	40247662	40247770	40247662	ID=MsG0380013540.01.T01:cds;Parent=MsG0380013540.01.T01
Chr3	three_prime_UTR	40247771	40248072	40247771	ID=MsG0380013540.01.T01:three_prime_utr;Parent=MsG0380013540.01.T01

Gene Sequence

>MsG0380013540.01.T01

ATGGCAAACATTTTCACCCCCATTTCAGTTGTGACAGGTGGAAAGAAGGATTTGAAGTTGATTGTCTGTGTGGCCCATATATGGCTGATCCGTGATATGGAAAATCCAGACGATATCATCTTCATGAACATGATATTGGTTGATGAGAAGATATATTATATAAATCGATTCTTTGTTATTGATTTAATGGATTATGAAATGATGAAGGATTCTGAAACTTTTGAAATGCTAAATTTGCTCTTTGTAAAGCAGGATGATGTGGCGTCTCGAAACCGTTTGTCTACTTTGTTTCTGACCGAAGAGGGAGAAGACAATGTGCATCGTAATGGGAGAAATTTTGAGGAGGGATCACAGAGTGATGATAGGCAGCTTAAAGACGAGGCAAAGTTTCTTAAAGCTTGTGGTACCATAGCAAGTACCCCTACTGAAATTCGGAAAGCATCGGAGAAACTAAAAGTGTCACCTTCATGTAGTAACGATTCTGGTCCTCCAAAGTTTCGTTCTTGGCTTCTTGATACATCTGCTGAGAATGTTCCAACTAATGTCCAACCATTCAATCCGCCAACTCCCAAAAAACAATGTGAAGAATGGGAGAAAATAACAGATTGTTCAGACCACACACCTAGCAGCTGTATCTCCAATGCACACAATACTCAATGGGAATATCATGACTCTTCGGAAGGAAGTGGGCAGGGGAGCTATCATCCGACCGATGGGACTGAAATGAATAAGGGGAGGAACAAGTCCGTACGTTTTGAATGTGATACTGATATTTCATCCTGTGAGTCATCGGCTTATGGTGGATGGCGTACGAAGAAAACAGAGTCACCAAATCCTACCCCAATGAAGATATCTGAAGGGATGCAAACTCCTGGAACTGTTTACTCTGTTAAGTCCCAGTTTGTGTATCCAAATAACAGCCTAGGTGAGGATGTCTCTAAGAGCAAGATACTTGAGGAAGAGGATTATGTTCCTGCGCAAGATTCAAGGAAGATGAACAAGTCAATTGAGCAGTCTCAAAATGCAACGTCTACACCAGATAAAAGTGAATCTACCGTGGAAGAAGGCTTGTCTTCTTGGTTGAAGCCTGCATCTGTTATTTTGGAGGAGAGAAGAAAGAAAATGGAGATGGCTTATAATCAGACCCGCAAAACTCCTGTCGATAGGCCCATCATTGGGATGGTTGCTGCACATTGGATTGAAGAGGAAAATTCTGATGCTCCTCCTCCTAAGTGGTGGGATGGCAATGGCATACCAAATTCAACCAACAAATACAAAGAAGACCAGAAAGTGAGCTGGCATGCTACGCCGTTCGAAGAGAGGTTGGAGAAGGCATTATCTGAGGATATTATCATCGCTCAAAGGAAAGATATTTGCGGAAAACCAATTGCTTTTGATGAGAATGAAGAAAGCGATACTGCATTGTCTCATTTGAAATCTTCATCCCATCCACAGTCCGTGGCGTCGTGTTGA

Protein sequence

>MsG0380013540.01.T01

MANIFTPISVVTGGKKDLKLIVCVAHIWLIRDMENPDDIIFMNMILVDEKIYYINRFFVIDLMDYEMMKDSETFEMLNLLFVKQDDVASRNRLSTLFLTEEGEDNVHRNGRNFEEGSQSDDRQLKDEAKFLKACGTIASTPTEIRKASEKLKVSPSCSNDSGPPKFRSWLLDTSAENVPTNVQPFNPPTPKKQCEEWEKITDCSDHTPSSCISNAHNTQWEYHDSSEGSGQGSYHPTDGTEMNKGRNKSVRFECDTDISSCESSAYGGWRTKKTESPNPTPMKISEGMQTPGTVYSVKSQFVYPNNSLGEDVSKSKILEEEDYVPAQDSRKMNKSIEQSQNATSTPDKSESTVEEGLSSWLKPASVILEERRKKMEMAYNQTRKTPVDRPIIGMVAAHWIEEENSDAPPPKWWDGNGIPNSTNKYKEDQKVSWHATPFEERLEKALSEDIIIAQRKDICGKPIAFDENEESDTALSHLKSSSHPQSVASC*