Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480024019.01.T01 | XP_003631101.1 | 97.2 | 250 | 6 | 1 | 1 | 250 | 1 | 249 | 3.11E-177 | 497 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480024019.01.T01 | P50699 | 77.434 | 226 | 51 | 0 | 25 | 250 | 18 | 243 | 3.48E-133 | 378 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480024019.01.T01 | G7LDC8 | 97.200 | 250 | 6 | 1 | 1 | 250 | 1 | 249 | 1.49e-177 | 497 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047815.01 | MsG0480024019.01 | 0.842834 | 2.029227e-58 | 3.114894e-55 |
| MsG0080048258.01 | MsG0480024019.01 | 0.812929 | 3.310591e-51 | 2.132244e-48 |
| MsG0080048797.01 | MsG0480024019.01 | 0.892239 | 1.906349e-74 | 1.727777e-70 |
| MsG0180000984.01 | MsG0480024019.01 | 0.844752 | 6.224411e-59 | 1.014883e-55 |
| MsG0180001288.01 | MsG0480024019.01 | 0.860266 | 2.329090e-63 | 6.328505e-60 |
| MsG0180001293.01 | MsG0480024019.01 | 0.800790 | 1.221724e-48 | 5.739435e-46 |
| MsG0180001588.01 | MsG0480024019.01 | 0.883546 | 4.095582e-71 | 2.608355e-67 |
| MsG0180001719.01 | MsG0480024019.01 | 0.879401 | 1.283804e-69 | 6.951093e-66 |
| MsG0180002134.01 | MsG0480024019.01 | 0.816303 | 5.927146e-52 | 4.184745e-49 |
| MsG0180002428.01 | MsG0480024019.01 | 0.826045 | 3.364777e-54 | 3.120399e-51 |
| MsG0180003857.01 | MsG0480024019.01 | 0.831003 | 2.135651e-55 | 2.287865e-52 |
| MsG0180003905.01 | MsG0480024019.01 | 0.875388 | 3.204875e-68 | 1.493428e-64 |
| MsG0180003945.01 | MsG0480024019.01 | 0.803258 | 3.797844e-49 | 1.899702e-46 |
| MsG0180004120.01 | MsG0480024019.01 | 0.886258 | 3.998413e-72 | 2.835182e-68 |
| MsG0180004185.01 | MsG0480024019.01 | 0.823754 | 1.168465e-53 | 1.015237e-50 |
| MsG0180004433.01 | MsG0480024019.01 | 0.801071 | 1.070499e-48 | 5.065383e-46 |
| MsG0180004471.01 | MsG0480024019.01 | 0.846748 | 1.787294e-59 | 3.107435e-56 |
| MsG0180004538.01 | MsG0480024019.01 | 0.829402 | 5.252194e-55 | 5.370171e-52 |
| MsG0180004583.01 | MsG0480024019.01 | 0.872226 | 3.741277e-67 | 1.553292e-63 |
| MsG0180004660.01 | MsG0480024019.01 | 0.806193 | 9.263014e-50 | 4.996593e-47 |
| MsG0180004828.01 | MsG0480024019.01 | 0.826267 | 2.980261e-54 | 2.781305e-51 |
| MsG0180005325.01 | MsG0480024019.01 | 0.857210 | 1.905991e-62 | 4.668326e-59 |
| MsG0180005621.01 | MsG0480024019.01 | 0.856007 | 4.302185e-62 | 1.012278e-58 |
| MsG0180005655.01 | MsG0480024019.01 | 0.861819 | 7.845074e-64 | 2.248164e-60 |
| MsG0180005678.01 | MsG0480024019.01 | 0.835359 | 1.757362e-56 | 2.144038e-53 |
| MsG0180005819.01 | MsG0480024019.01 | 0.844600 | 6.836124e-59 | 1.109299e-55 |
| MsG0180006183.01 | MsG0480024019.01 | 0.871897 | 4.813860e-67 | 1.974023e-63 |
| MsG0180006253.01 | MsG0480024019.01 | 0.813140 | 2.975199e-51 | 1.927129e-48 |
| MsG0280010617.01 | MsG0480024019.01 | 0.861896 | 7.432328e-64 | 2.135509e-60 |
| MsG0280010825.01 | MsG0480024019.01 | 0.854308 | 1.341797e-61 | 2.983891e-58 |
| MsG0380012118.01 | MsG0480024019.01 | 0.807972 | 3.893250e-50 | 2.198871e-47 |
| MsG0380012818.01 | MsG0480024019.01 | 0.817079 | 3.972038e-52 | 2.864284e-49 |
| MsG0380012956.01 | MsG0480024019.01 | 0.820328 | 7.269965e-53 | 5.734510e-50 |
| MsG0380013540.01 | MsG0480024019.01 | 0.807785 | 4.265432e-50 | 2.397322e-47 |
| MsG0380014542.01 | MsG0480024019.01 | 0.920167 | 1.801407e-87 | 6.017620e-83 |
| MsG0380014544.01 | MsG0480024019.01 | 0.908102 | 2.465371e-81 | 4.504359e-77 |
| MsG0380014666.01 | MsG0480024019.01 | 0.842304 | 2.805407e-58 | 4.235909e-55 |
| MsG0480018767.01 | MsG0480024019.01 | 0.813769 | 2.164509e-51 | 1.426210e-48 |
| MsG0480018875.01 | MsG0480024019.01 | 0.825748 | 3.958769e-54 | 3.640481e-51 |
| MsG0480019601.01 | MsG0480024019.01 | 0.817964 | 2.509022e-52 | 1.853661e-49 |
| MsG0480020366.01 | MsG0480024019.01 | 0.806727 | 7.149436e-50 | 3.909295e-47 |
| MsG0480020398.01 | MsG0480024019.01 | 0.875895 | 2.147698e-68 | 1.020396e-64 |
| MsG0480020937.01 | MsG0480024019.01 | 0.945457 | 2.946844e-104 | 4.516109e-99 |
| MsG0480020970.01 | MsG0480024019.01 | 0.827196 | 1.787944e-54 | 1.714032e-51 |
| MsG0480021100.01 | MsG0480024019.01 | 0.892449 | 1.571583e-74 | 1.437516e-70 |
| MsG0480021175.01 | MsG0480024019.01 | 0.821042 | 4.981529e-53 | 4.008850e-50 |
| MsG0480021224.01 | MsG0480024019.01 | 0.831385 | 1.720358e-55 | 1.863986e-52 |
| MsG0480021301.01 | MsG0480024019.01 | 0.834205 | 3.429313e-56 | 4.040950e-53 |
| MsG0480021436.01 | MsG0480024019.01 | 0.824076 | 9.815591e-54 | 8.605119e-51 |
| MsG0480021456.01 | MsG0480024019.01 | 0.865891 | 4.249992e-65 | 1.405119e-61 |
| MsG0480021486.01 | MsG0480024019.01 | 0.886006 | 4.975028e-72 | 3.490866e-68 |
| MsG0480021704.01 | MsG0480024019.01 | 0.840852 | 6.773925e-58 | 9.773984e-55 |
| MsG0480021740.01 | MsG0480024019.01 | 0.869369 | 3.260602e-66 | 1.220795e-62 |
| MsG0480021773.01 | MsG0480024019.01 | 0.913288 | 7.320389e-84 | 1.718084e-79 |
| MsG0480021902.01 | MsG0480024019.01 | 0.879409 | 1.276336e-69 | 6.912970e-66 |
| MsG0480022307.01 | MsG0480024019.01 | 0.894995 | 1.458187e-75 | 1.484716e-71 |
| MsG0480022378.01 | MsG0480024019.01 | 0.893816 | 4.416678e-75 | 4.277848e-71 |
| MsG0480022682.01 | MsG0480024019.01 | 0.854730 | 1.013420e-61 | 2.285167e-58 |
| MsG0480022784.01 | MsG0480024019.01 | 0.818197 | 2.222156e-52 | 1.652336e-49 |
| MsG0480023414.01 | MsG0480024019.01 | 0.850860 | 1.292108e-60 | 2.566261e-57 |
| MsG0480023424.01 | MsG0480024019.01 | 0.835098 | 2.045176e-56 | 2.475244e-53 |
| MsG0480023426.01 | MsG0480024019.01 | 0.910240 | 2.337955e-82 | 4.728686e-78 |
| MsG0480023575.01 | MsG0480024019.01 | 0.823489 | 1.347858e-53 | 1.162244e-50 |
| MsG0480023626.01 | MsG0480024019.01 | 0.882498 | 9.909652e-71 | 6.050215e-67 |
| MsG0480023706.01 | MsG0480024019.01 | 0.839311 | 1.709227e-57 | 2.351237e-54 |
| MsG0480023842.01 | MsG0480024019.01 | 0.942059 | 1.403965e-101 | 1.711719e-96 |
| MsG0480023913.01 | MsG0480024019.01 | 0.923096 | 4.162846e-89 | 1.634714e-84 |
| MsG0480024019.01 | MsG0580024158.01 | 0.800896 | 1.162275e-48 | 5.475397e-46 |
| MsG0480024019.01 | MsG0580024276.01 | 0.928915 | 1.467450e-92 | 7.960522e-88 |
| MsG0480024019.01 | MsG0580024773.01 | 0.827672 | 1.374622e-54 | 1.336064e-51 |
| MsG0480024019.01 | MsG0580025504.01 | 0.894830 | 1.705249e-75 | 1.723803e-71 |
| MsG0480024019.01 | MsG0580025970.01 | 0.838389 | 2.960724e-57 | 3.959565e-54 |
| MsG0480024019.01 | MsG0580026343.01 | 0.844632 | 6.703968e-59 | 1.088930e-55 |
| MsG0480024019.01 | MsG0580027854.01 | 0.811739 | 6.022159e-51 | 3.757483e-48 |
| MsG0480024019.01 | MsG0580028916.01 | 0.804349 | 2.254228e-49 | 1.159633e-46 |
| MsG0480024019.01 | MsG0580028927.01 | 0.809109 | 2.225982e-50 | 1.295547e-47 |
| MsG0480024019.01 | MsG0580028955.01 | 0.896110 | 5.048576e-76 | 5.384542e-72 |
| MsG0480024019.01 | MsG0580030141.01 | 0.883652 | 3.741447e-71 | 2.393513e-67 |
| MsG0480024019.01 | MsG0680031356.01 | 0.884692 | 1.543127e-71 | 1.028138e-67 |
| MsG0480024019.01 | MsG0680033645.01 | 0.817269 | 3.599724e-52 | 2.609274e-49 |
| MsG0480024019.01 | MsG0680035792.01 | 0.865251 | 6.762521e-65 | 2.185623e-61 |
| MsG0480024019.01 | MsG0780035917.01 | 0.802404 | 5.701846e-49 | 2.790709e-46 |
| MsG0480024019.01 | MsG0780036553.01 | 0.823909 | 1.074217e-53 | 9.373833e-51 |
| MsG0480024019.01 | MsG0780036901.01 | 0.803914 | 2.776295e-49 | 1.412440e-46 |
| MsG0480024019.01 | MsG0780038642.01 | 0.808589 | 2.875319e-50 | 1.650492e-47 |
| MsG0480024019.01 | MsG0780038647.01 | 0.876154 | 1.749719e-68 | 8.394484e-65 |
| MsG0480024019.01 | MsG0780038736.01 | 0.874121 | 8.651318e-68 | 3.847802e-64 |
| MsG0480024019.01 | MsG0780039536.01 | 0.884999 | 1.186322e-71 | 8.003871e-68 |
| MsG0480024019.01 | MsG0780040459.01 | 0.893951 | 3.893723e-75 | 3.792458e-71 |
| MsG0480024019.01 | MsG0780040554.01 | 0.914970 | 1.024773e-84 | 2.616204e-80 |
| MsG0480024019.01 | MsG0780040641.01 | 0.828390 | 9.234115e-55 | 9.165819e-52 |
| MsG0480024019.01 | MsG0780040830.01 | 0.800691 | 1.279860e-48 | 5.997595e-46 |
| MsG0480024019.01 | MsG0780040899.01 | 0.850226 | 1.947812e-60 | 3.789348e-57 |
| MsG0480024019.01 | MsG0780040978.01 | 0.820400 | 6.997437e-53 | 5.531190e-50 |
| MsG0480024019.01 | MsG0780041008.01 | 0.816014 | 6.879229e-52 | 4.818458e-49 |
| MsG0480024019.01 | MsG0780041219.01 | 0.833726 | 4.518535e-56 | 5.248460e-53 |
| MsG0480024019.01 | MsG0780041232.01 | 0.824451 | 8.013480e-54 | 7.100245e-51 |
| MsG0480024019.01 | MsG0780041273.01 | 0.863431 | 2.502538e-64 | 7.583789e-61 |
| MsG0480024019.01 | MsG0780041359.01 | 0.826022 | 3.406958e-54 | 3.157544e-51 |
| MsG0480024019.01 | MsG0780041560.01 | 0.812991 | 3.209121e-51 | 2.070363e-48 |
| MsG0480024019.01 | MsG0780041820.01 | 0.830709 | 2.520830e-55 | 2.677176e-52 |
| MsG0480024019.01 | MsG0780041823.01 | 0.813398 | 2.612041e-51 | 1.703974e-48 |
| MsG0480024019.01 | MsG0880042392.01 | 0.866807 | 2.176091e-65 | 7.431378e-62 |
| MsG0480024019.01 | MsG0880043684.01 | 0.841337 | 5.050353e-58 | 7.397062e-55 |
| MsG0480024019.01 | MsG0880043714.01 | 0.816266 | 6.042857e-52 | 4.261975e-49 |
| MsG0480024019.01 | MsG0880043920.01 | 0.811907 | 5.534066e-51 | 3.468331e-48 |
| MsG0480024019.01 | MsG0880044139.01 | 0.852560 | 4.260452e-61 | 8.936883e-58 |
| MsG0480024019.01 | MsG0880044344.01 | 0.824667 | 7.129204e-54 | 6.357444e-51 |
| MsG0480024019.01 | MsG0880044437.01 | 0.834929 | 2.255306e-56 | 2.716128e-53 |
| MsG0480024019.01 | MsG0880044834.01 | -0.800065 | 1.716659e-48 | 7.917894e-46 |
| MsG0480024019.01 | MsG0880045015.01 | 0.819782 | 9.695324e-53 | 7.533076e-50 |
| MsG0480024019.01 | MsG0880045356.01 | 0.855334 | 6.764847e-62 | 1.556574e-58 |
| MsG0480024019.01 | MsG0880045584.01 | 0.801973 | 6.992305e-49 | 3.384676e-46 |
| MsG0480024019.01 | MsG0880045612.01 | 0.815150 | 1.071059e-51 | 7.326084e-49 |
| MsG0480024019.01 | MsG0880045647.01 | 0.877299 | 7.026369e-69 | 3.515499e-65 |
| MsG0480024019.01 | MsG0880045802.01 | 0.824181 | 9.278089e-54 | 8.157994e-51 |
| MsG0480024019.01 | MsG0880045879.01 | 0.859618 | 3.651355e-63 | 9.702554e-60 |
| MsG0480024019.01 | MsG0880046529.01 | 0.862370 | 5.317084e-64 | 1.553554e-60 |
| MsG0480024019.01 | MsG0880046904.01 | 0.844827 | 5.938290e-59 | 9.705571e-56 |
| MsG0480024019.01 | MsG0880046905.01 | 0.869097 | 3.996701e-66 | 1.481248e-62 |
| MsG0480024019.01 | MsG0880047090.01 | 0.802260 | 6.104275e-49 | 2.976635e-46 |
| MsG0480024019.01 | MsG0880047414.01 | 0.889632 | 2.034961e-73 | 1.655168e-69 |
| MsG0480024019.01 | MsG0880047450.01 | 0.825610 | 4.267760e-54 | 3.909093e-51 |
| MsG0480024019.01 | MsG0880047649.01 | 0.830730 | 2.490697e-55 | 2.646889e-52 |
| MsG0480024019.01 | MsG0880047681.01 | 0.841098 | 5.838611e-58 | 8.487775e-55 |
| MsG0380015090.01 | MsG0480024019.01 | 0.822311 | 2.535667e-53 | 2.114723e-50 |
| MsG0380015340.01 | MsG0480024019.01 | 0.880743 | 4.268555e-70 | 2.435199e-66 |
| MsG0380015402.01 | MsG0480024019.01 | 0.869542 | 2.863042e-66 | 1.078587e-62 |
| MsG0380015656.01 | MsG0480024019.01 | 0.847407 | 1.179662e-59 | 2.094684e-56 |
| MsG0380015954.01 | MsG0480024019.01 | 0.828003 | 1.144301e-54 | 1.123132e-51 |
| MsG0380016027.01 | MsG0480024019.01 | 0.833872 | 4.156059e-56 | 4.849279e-53 |
| MsG0380016031.01 | MsG0480024019.01 | 0.830964 | 2.182441e-55 | 2.335273e-52 |
| MsG0380016250.01 | MsG0480024019.01 | 0.861532 | 9.604825e-64 | 2.726710e-60 |
| MsG0380016819.01 | MsG0480024019.01 | 0.860073 | 2.663731e-63 | 7.191329e-60 |
| MsG0380017079.01 | MsG0480024019.01 | 0.802246 | 6.144240e-49 | 2.995156e-46 |
| MsG0380017128.01 | MsG0480024019.01 | 0.838743 | 2.398060e-57 | 3.241990e-54 |
| MsG0380017332.01 | MsG0480024019.01 | 0.801628 | 8.232859e-49 | 3.950451e-46 |
| MsG0380017380.01 | MsG0480024019.01 | 0.813537 | 2.434562e-51 | 1.594200e-48 |
| MsG0380017416.01 | MsG0480024019.01 | 0.854959 | 8.691783e-62 | 1.974970e-58 |
| MsG0380017588.01 | MsG0480024019.01 | 0.835872 | 1.303111e-56 | 1.614382e-53 |
| MsG0380017696.01 | MsG0480024019.01 | 0.886291 | 3.886272e-72 | 2.759321e-68 |
| MsG0380017913.01 | MsG0480024019.01 | 0.808934 | 2.426624e-50 | 1.405591e-47 |
| MsG0380018055.01 | MsG0480024019.01 | 0.853316 | 2.590634e-61 | 5.574655e-58 |
| MsG0480018111.01 | MsG0480024019.01 | 0.819914 | 9.043426e-53 | 7.052510e-50 |
| MsG0480018228.01 | MsG0480024019.01 | 0.896124 | 4.983346e-76 | 5.319728e-72 |
| MsG0480018362.01 | MsG0480024019.01 | 0.839898 | 1.202874e-57 | 1.684915e-54 |
| MsG0280006631.01 | MsG0480024019.01 | 0.805883 | 1.076304e-49 | 5.759872e-47 |
| MsG0280006666.01 | MsG0480024019.01 | 0.831443 | 1.664638e-55 | 1.806718e-52 |
| MsG0280006717.01 | MsG0480024019.01 | 0.823613 | 1.260622e-53 | 1.090826e-50 |
| MsG0280006851.01 | MsG0480024019.01 | 0.865954 | 4.059974e-65 | 1.345187e-61 |
| MsG0280006909.01 | MsG0480024019.01 | 0.859569 | 3.778464e-63 | 1.002284e-59 |
| MsG0280006924.01 | MsG0480024019.01 | 0.842730 | 2.162787e-58 | 3.308965e-55 |
| MsG0280007408.01 | MsG0480024019.01 | 0.834812 | 2.413854e-56 | 2.896609e-53 |
| MsG0280007423.01 | MsG0480024019.01 | -0.831212 | 1.896752e-55 | 2.044494e-52 |
| MsG0280007544.01 | MsG0480024019.01 | 0.828826 | 7.245295e-55 | 7.282816e-52 |
| MsG0280007688.01 | MsG0480024019.01 | 0.821974 | 3.034462e-53 | 2.506337e-50 |
| MsG0280007695.01 | MsG0480024019.01 | 0.877744 | 4.913612e-69 | 2.498921e-65 |
| MsG0280007919.01 | MsG0480024019.01 | 0.852674 | 3.954735e-61 | 8.326404e-58 |
| MsG0280009866.01 | MsG0480024019.01 | 0.805203 | 1.494815e-49 | 7.860888e-47 |
| MsG0280009980.01 | MsG0480024019.01 | 0.832682 | 8.222165e-56 | 9.257305e-53 |
PPI
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480024019.01.T01 | MTR_8g107140 | 97.200 | 250 | 6 | 1 | 1 | 250 | 1 | 249 | 0.0 | 497 |
| MsG0480024019.01.T01 | MTR_6g079580 | 69.748 | 238 | 71 | 1 | 9 | 246 | 4 | 240 | 1.29e-130 | 369 |
| MsG0480024019.01.T01 | MTR_8g036215 | 59.091 | 220 | 88 | 2 | 27 | 245 | 19 | 237 | 1.35e-91 | 270 |
| MsG0480024019.01.T01 | MTR_3g111620 | 54.185 | 227 | 99 | 3 | 23 | 246 | 22 | 246 | 1.49e-87 | 260 |
| MsG0480024019.01.T01 | MTR_8g075550 | 53.879 | 232 | 99 | 3 | 27 | 250 | 27 | 258 | 6.14e-84 | 253 |
| MsG0480024019.01.T01 | MTR_4g073720 | 51.639 | 244 | 102 | 5 | 4 | 245 | 10 | 239 | 5.83e-82 | 249 |
| MsG0480024019.01.T01 | MTR_1g025420 | 52.893 | 242 | 109 | 4 | 9 | 245 | 4 | 245 | 9.73e-82 | 248 |
| MsG0480024019.01.T01 | MTR_1g025420 | 52.893 | 242 | 109 | 4 | 9 | 245 | 4 | 245 | 1.22e-81 | 246 |
| MsG0480024019.01.T01 | MTR_7g062610 | 50.424 | 236 | 111 | 3 | 14 | 246 | 10 | 242 | 1.62e-81 | 244 |
| MsG0480024019.01.T01 | MTR_3g068015 | 49.597 | 248 | 115 | 4 | 7 | 246 | 3 | 248 | 3.44e-81 | 244 |
| MsG0480024019.01.T01 | MTR_1g021945 | 54.148 | 229 | 98 | 3 | 23 | 247 | 21 | 246 | 6.33e-81 | 243 |
| MsG0480024019.01.T01 | MTR_8g075510 | 54.167 | 240 | 98 | 6 | 10 | 246 | 14 | 244 | 1.00e-80 | 243 |
| MsG0480024019.01.T01 | MTR_5g022350 | 54.222 | 225 | 93 | 4 | 24 | 246 | 27 | 243 | 7.71e-80 | 243 |
| MsG0480024019.01.T01 | MTR_8g075510 | 53.975 | 239 | 98 | 6 | 10 | 245 | 14 | 243 | 8.81e-80 | 242 |
| MsG0480024019.01.T01 | MTR_8g037890 | 49.402 | 251 | 118 | 5 | 1 | 246 | 1 | 247 | 5.69e-78 | 238 |
| MsG0480024019.01.T01 | MTR_5g059200 | 53.097 | 226 | 99 | 4 | 25 | 250 | 26 | 244 | 3.19e-77 | 235 |
| MsG0480024019.01.T01 | MTR_5g022310 | 50.198 | 253 | 117 | 6 | 1 | 246 | 1 | 251 | 1.33e-76 | 233 |
| MsG0480024019.01.T01 | MTR_5g022310 | 50.198 | 253 | 117 | 6 | 1 | 246 | 1 | 251 | 2.91e-76 | 233 |
| MsG0480024019.01.T01 | MTR_7g102380 | 52.679 | 224 | 100 | 5 | 28 | 247 | 21 | 242 | 6.25e-76 | 230 |
| MsG0480024019.01.T01 | MTR_3g114030 | 50.218 | 229 | 109 | 4 | 27 | 250 | 6 | 234 | 3.22e-73 | 223 |
| MsG0480024019.01.T01 | MTR_8g056820 | 48.374 | 246 | 117 | 5 | 6 | 246 | 7 | 247 | 1.25e-72 | 223 |
| MsG0480024019.01.T01 | MTR_1g062590 | 47.325 | 243 | 122 | 5 | 8 | 246 | 2 | 242 | 1.37e-72 | 222 |
| MsG0480024019.01.T01 | MTR_6g009480 | 44.664 | 253 | 132 | 6 | 1 | 247 | 3 | 253 | 1.89e-72 | 223 |
| MsG0480024019.01.T01 | MTR_2g069660 | 50.885 | 226 | 106 | 4 | 25 | 246 | 19 | 243 | 7.10e-71 | 218 |
| MsG0480024019.01.T01 | MTR_1g062370 | 47.699 | 239 | 119 | 5 | 12 | 246 | 6 | 242 | 3.40e-70 | 216 |
| MsG0480024019.01.T01 | MTR_4g073730 | 49.794 | 243 | 115 | 6 | 9 | 246 | 8 | 248 | 1.80e-69 | 216 |
| MsG0480024019.01.T01 | MTR_1g062350 | 47.280 | 239 | 120 | 5 | 12 | 246 | 6 | 242 | 1.82e-69 | 214 |
| MsG0480024019.01.T01 | MTR_1g062340 | 47.479 | 238 | 119 | 5 | 13 | 246 | 7 | 242 | 2.75e-69 | 213 |
| MsG0480024019.01.T01 | MTR_4g073730 | 49.794 | 243 | 115 | 6 | 9 | 246 | 8 | 248 | 4.31e-69 | 216 |
| MsG0480024019.01.T01 | MTR_1g062660 | 48.458 | 227 | 111 | 5 | 26 | 248 | 20 | 244 | 1.97e-68 | 211 |
| MsG0480024019.01.T01 | MTR_1g062630 | 45.122 | 246 | 129 | 5 | 8 | 249 | 2 | 245 | 1.09e-67 | 210 |
| MsG0480024019.01.T01 | MTR_2g068030 | 46.288 | 229 | 116 | 5 | 22 | 245 | 17 | 243 | 5.51e-67 | 208 |
| MsG0480024019.01.T01 | MTR_2g067980 | 46.939 | 245 | 118 | 6 | 9 | 246 | 8 | 247 | 1.32e-64 | 217 |
| MsG0480024019.01.T01 | MTR_4g063630 | 44.958 | 238 | 120 | 6 | 14 | 245 | 19 | 251 | 8.43e-63 | 197 |
| MsG0480024019.01.T01 | MTR_2g068655 | 44.541 | 229 | 120 | 5 | 27 | 250 | 30 | 256 | 2.01e-60 | 193 |
| MsG0480024019.01.T01 | MTR_1g062690 | 42.616 | 237 | 110 | 5 | 12 | 246 | 6 | 218 | 2.76e-57 | 182 |
| MsG0480024019.01.T01 | MTR_5g010635 | 41.333 | 225 | 109 | 7 | 25 | 246 | 21 | 225 | 2.14e-49 | 162 |
| MsG0480024019.01.T01 | MTR_5g010640 | 38.340 | 253 | 128 | 8 | 4 | 246 | 2 | 236 | 5.81e-48 | 159 |
| MsG0480024019.01.T01 | MTR_2g067970 | 45.902 | 183 | 89 | 7 | 71 | 246 | 3 | 182 | 3.58e-47 | 167 |
| MsG0480024019.01.T01 | MTR_8g096900 | 36.948 | 249 | 125 | 11 | 3 | 246 | 27 | 248 | 7.21e-45 | 151 |
| MsG0480024019.01.T01 | MTR_8g089020 | 48.936 | 141 | 69 | 2 | 101 | 241 | 22 | 159 | 5.67e-43 | 143 |
| MsG0480024019.01.T01 | MTR_5g022350 | 52.239 | 134 | 59 | 3 | 24 | 155 | 92 | 222 | 1.19e-40 | 139 |
| MsG0480024019.01.T01 | MTR_2g067990 | 38.326 | 227 | 107 | 10 | 24 | 246 | 25 | 222 | 1.47e-39 | 145 |
| MsG0480024019.01.T01 | MTR_2g063150 | 33.659 | 205 | 128 | 5 | 28 | 228 | 34 | 234 | 6.69e-36 | 128 |
| MsG0480024019.01.T01 | MTR_5g023850 | 34.800 | 250 | 118 | 10 | 7 | 247 | 4 | 217 | 3.15e-35 | 125 |
| MsG0480024019.01.T01 | MTR_1g062390 | 30.435 | 253 | 154 | 7 | 1 | 246 | 1 | 238 | 1.12e-29 | 112 |
| MsG0480024019.01.T01 | MTR_7g076360 | 34.123 | 211 | 76 | 4 | 27 | 236 | 7 | 155 | 1.18e-29 | 109 |
| MsG0480024019.01.T01 | MTR_8g096910 | 39.860 | 143 | 71 | 5 | 4 | 143 | 2 | 132 | 2.22e-27 | 103 |
| MsG0480024019.01.T01 | MTR_8g096920 | 40.876 | 137 | 69 | 5 | 11 | 143 | 1 | 129 | 1.12e-24 | 97.1 |
| MsG0480024019.01.T01 | MTR_3g081550 | 42.553 | 94 | 51 | 2 | 112 | 202 | 16 | 109 | 1.23e-15 | 71.2 |
| MsG0480024019.01.T01 | MTR_1g062640 | 31.081 | 148 | 92 | 5 | 23 | 167 | 8 | 148 | 3.28e-14 | 68.6 |
| MsG0480024019.01.T01 | MTR_5g068670 | 48.750 | 80 | 37 | 2 | 65 | 142 | 12 | 89 | 4.86e-14 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480024019.01.T01 | AT1G18250 | 78.319 | 226 | 49 | 0 | 25 | 250 | 19 | 244 | 4.54e-135 | 380 |
| MsG0480024019.01.T01 | AT1G18250 | 77.434 | 226 | 51 | 0 | 25 | 250 | 18 | 243 | 3.55e-134 | 378 |
| MsG0480024019.01.T01 | AT1G73620 | 74.336 | 226 | 58 | 0 | 25 | 250 | 39 | 264 | 9.60e-130 | 368 |
| MsG0480024019.01.T01 | AT1G75050 | 55.462 | 238 | 102 | 3 | 14 | 249 | 11 | 246 | 3.35e-88 | 261 |
| MsG0480024019.01.T01 | AT1G75030 | 56.087 | 230 | 95 | 4 | 24 | 249 | 19 | 246 | 4.08e-85 | 254 |
| MsG0480024019.01.T01 | AT1G75040 | 56.250 | 240 | 94 | 6 | 9 | 246 | 9 | 239 | 1.41e-83 | 249 |
| MsG0480024019.01.T01 | AT1G19320 | 53.175 | 252 | 105 | 5 | 1 | 245 | 1 | 246 | 4.39e-82 | 246 |
| MsG0480024019.01.T01 | AT4G38660 | 51.304 | 230 | 105 | 3 | 21 | 248 | 1 | 225 | 1.53e-80 | 245 |
| MsG0480024019.01.T01 | AT4G38660 | 49.597 | 248 | 114 | 4 | 3 | 248 | 9 | 247 | 2.47e-80 | 245 |
| MsG0480024019.01.T01 | AT1G77700 | 53.712 | 229 | 98 | 5 | 23 | 250 | 55 | 276 | 1.18e-79 | 242 |
| MsG0480024019.01.T01 | AT1G77700 | 54.911 | 224 | 93 | 5 | 23 | 245 | 55 | 271 | 2.63e-79 | 242 |
| MsG0480024019.01.T01 | AT1G77700 | 53.680 | 231 | 99 | 5 | 16 | 245 | 76 | 299 | 2.91e-79 | 243 |
| MsG0480024019.01.T01 | AT1G75800 | 53.333 | 240 | 105 | 5 | 14 | 246 | 9 | 248 | 4.46e-78 | 239 |
| MsG0480024019.01.T01 | AT1G20030 | 54.667 | 225 | 95 | 5 | 29 | 246 | 4 | 228 | 1.54e-76 | 234 |
| MsG0480024019.01.T01 | AT1G20030 | 54.667 | 225 | 95 | 5 | 29 | 246 | 21 | 245 | 2.27e-76 | 234 |
| MsG0480024019.01.T01 | AT4G24180 | 48.047 | 256 | 112 | 6 | 5 | 250 | 16 | 260 | 1.36e-74 | 228 |
| MsG0480024019.01.T01 | AT5G02140 | 47.280 | 239 | 120 | 4 | 12 | 246 | 5 | 241 | 3.45e-74 | 228 |
| MsG0480024019.01.T01 | AT4G24180 | 50.000 | 236 | 103 | 5 | 25 | 250 | 25 | 255 | 5.00e-74 | 226 |
| MsG0480024019.01.T01 | AT5G02140 | 47.280 | 239 | 120 | 4 | 12 | 246 | 5 | 241 | 5.11e-74 | 226 |
| MsG0480024019.01.T01 | AT4G24180 | 48.413 | 252 | 109 | 6 | 5 | 246 | 16 | 256 | 5.43e-74 | 228 |
| MsG0480024019.01.T01 | AT4G24180 | 50.431 | 232 | 100 | 5 | 25 | 246 | 25 | 251 | 2.16e-73 | 226 |
| MsG0480024019.01.T01 | AT2G17860 | 47.755 | 245 | 120 | 5 | 14 | 250 | 9 | 253 | 2.83e-73 | 224 |
| MsG0480024019.01.T01 | AT5G40020 | 45.968 | 248 | 124 | 4 | 6 | 248 | 8 | 250 | 5.19e-73 | 223 |
| MsG0480024019.01.T01 | AT5G24620 | 46.332 | 259 | 119 | 5 | 1 | 250 | 9 | 256 | 5.48e-72 | 226 |
| MsG0480024019.01.T01 | AT4G36010 | 51.082 | 231 | 102 | 5 | 26 | 246 | 21 | 250 | 7.26e-72 | 222 |
| MsG0480024019.01.T01 | AT4G36010 | 51.082 | 231 | 102 | 5 | 26 | 246 | 21 | 250 | 7.26e-72 | 222 |
| MsG0480024019.01.T01 | AT5G24620 | 46.332 | 259 | 119 | 5 | 1 | 250 | 64 | 311 | 1.33e-71 | 227 |
| MsG0480024019.01.T01 | AT5G24620 | 46.332 | 259 | 119 | 5 | 1 | 250 | 85 | 332 | 1.95e-71 | 227 |
| MsG0480024019.01.T01 | AT4G38670 | 48.387 | 248 | 115 | 6 | 5 | 246 | 7 | 247 | 7.34e-69 | 214 |
| MsG0480024019.01.T01 | AT4G38670 | 48.387 | 248 | 115 | 6 | 5 | 246 | 7 | 247 | 7.34e-69 | 214 |
| MsG0480024019.01.T01 | AT4G38670 | 51.339 | 224 | 103 | 5 | 29 | 246 | 8 | 231 | 1.21e-67 | 210 |
| MsG0480024019.01.T01 | AT4G24180 | 46.835 | 237 | 105 | 6 | 5 | 231 | 16 | 241 | 2.88e-65 | 206 |
| MsG0480024019.01.T01 | AT4G24180 | 48.848 | 217 | 96 | 5 | 25 | 231 | 25 | 236 | 1.16e-64 | 204 |
| MsG0480024019.01.T01 | AT2G28790 | 44.538 | 238 | 123 | 6 | 14 | 245 | 39 | 273 | 1.19e-64 | 202 |
| MsG0480024019.01.T01 | AT2G28790 | 44.538 | 238 | 123 | 6 | 14 | 245 | 14 | 248 | 1.80e-64 | 201 |
| MsG0480024019.01.T01 | AT5G38280 | 43.750 | 240 | 128 | 6 | 14 | 246 | 11 | 250 | 7.03e-59 | 197 |
| MsG0480024019.01.T01 | AT5G38280 | 43.750 | 240 | 128 | 6 | 14 | 246 | 11 | 250 | 9.94e-59 | 197 |
| MsG0480024019.01.T01 | AT4G11650 | 40.239 | 251 | 123 | 7 | 1 | 249 | 1 | 226 | 1.90e-56 | 181 |
| MsG0480024019.01.T01 | AT4G36000 | 58.503 | 147 | 51 | 3 | 103 | 247 | 1 | 139 | 1.78e-54 | 174 |
| MsG0480024019.01.T01 | AT4G36000 | 58.503 | 147 | 51 | 3 | 103 | 247 | 1 | 139 | 1.78e-54 | 174 |
| MsG0480024019.01.T01 | AT4G18253 | 38.655 | 238 | 138 | 4 | 14 | 249 | 10 | 241 | 8.10e-51 | 166 |
| MsG0480024019.01.T01 | AT1G70250 | 38.326 | 227 | 126 | 8 | 29 | 246 | 146 | 367 | 1.23e-41 | 151 |
| MsG0480024019.01.T01 | AT4G18250 | 38.182 | 220 | 127 | 6 | 30 | 246 | 59 | 272 | 2.89e-38 | 141 |
| MsG0480024019.01.T01 | AT5G24620 | 52.800 | 125 | 53 | 3 | 132 | 250 | 15 | 139 | 2.91e-35 | 128 |
| MsG0480024019.01.T01 | AT2G24810 | 58.442 | 77 | 32 | 0 | 169 | 245 | 116 | 192 | 1.55e-24 | 97.1 |
Find 109 sgRNAs with CRISPR-Local
Find 121 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACAATGGTCAGGCCGTTTC+TGG | 0.068116 | 4:-92401230 | MsG0480024019.01.T01:CDS |
| CCGGCACCGGGTTGGATTGC+TGG | 0.183097 | 4:+92401321 | None:intergenic |
| AGCAACTCTTATTATTATTA+TGG | 0.205585 | 4:-92400568 | MsG0480024019.01.T01:three_prime_UTR |
| ATTGAAGTAAAGAGACTTCT+AGG | 0.255474 | 4:+92400598 | None:intergenic |
| ATGGTTGGTTAAGTTTAATT+TGG | 0.293012 | 4:-92400549 | MsG0480024019.01.T01:three_prime_UTR |
| TGAATAAGCAGTGGGCTTGC+AGG | 0.307584 | 4:+92400834 | None:intergenic |
| GACCTCACCTGCAACCCTAC+TGG | 0.350758 | 4:+92400952 | None:intergenic |
| CATAAATATAAAGATGATAA+TGG | 0.359531 | 4:+92400657 | None:intergenic |
| ATTACACCTTTCAAGGGATC+TGG | 0.363950 | 4:-92401021 | MsG0480024019.01.T01:CDS |
| AAGCAGCCATGGTGTGATAT+TGG | 0.364556 | 4:+92401589 | None:intergenic |
| CGGTGCCGGAAAACCCATTC+TGG | 0.376903 | 4:-92401307 | MsG0480024019.01.T01:CDS |
| CTGACCATTGTGGTGGGACT+TGG | 0.379600 | 4:+92401241 | None:intergenic |
| GATTTCCATTACACCTTTCA+AGG | 0.380242 | 4:-92401028 | MsG0480024019.01.T01:CDS |
| GAAGCCGCCGCGGGCCAGAA+TGG | 0.391505 | 4:+92401293 | None:intergenic |
| ACAATGGTCAGGCCGTTTCT+GGG | 0.391880 | 4:-92401229 | MsG0480024019.01.T01:CDS |
| ATTGCTGGCCACACTGGGTG+GGG | 0.395326 | 4:+92401336 | None:intergenic |
| TGGAGGGAATAAGCTTTGTT+TGG | 0.398076 | 4:+92401261 | None:intergenic |
| TAAGCATAAGAGTAAGCCTT+TGG | 0.402209 | 4:+92400790 | None:intergenic |
| GGTTGGATTGCTGGCCACAC+TGG | 0.402359 | 4:+92401330 | None:intergenic |
| GGGAATAAGCTTTGTTTGGT+GGG | 0.404140 | 4:+92401265 | None:intergenic |
| ACACTCGCTGAGTTCACATT+TGG | 0.414011 | 4:-92401102 | MsG0480024019.01.T01:CDS |
| AAGCCGCCGCGGGCCAGAAT+GGG | 0.420312 | 4:+92401294 | None:intergenic |
| GATGTGCCCAGTAGGGTTGC+AGG | 0.421685 | 4:-92400959 | MsG0480024019.01.T01:CDS |
| CGCAGTCTCCGGTGGCGCAA+TGG | 0.424632 | 4:+92401169 | None:intergenic |
| TTGAAAGGTGTAATGGAAAT+CGG | 0.429153 | 4:+92401030 | None:intergenic |
| CAGTGGGCTTGCAGGTCTGT+GGG | 0.433412 | 4:+92400842 | None:intergenic |
| ATTGGTGCAAGTAGCAATAC+TGG | 0.439699 | 4:+92400756 | None:intergenic |
| ACCTCACCTGCAACCCTACT+GGG | 0.443228 | 4:+92400953 | None:intergenic |
| GGCCACGGCCATTGCGCCAC+CGG | 0.444546 | 4:-92401177 | MsG0480024019.01.T01:CDS |
| GGATTGCTGGCCACACTGGG+TGG | 0.446029 | 4:+92401334 | None:intergenic |
| CTCCGGTGGCGCAATGGCCG+TGG | 0.450871 | 4:+92401175 | None:intergenic |
| AGCAGCCATGGTGTGATATT+GGG | 0.456122 | 4:+92401590 | None:intergenic |
| GTTGGATTGCTGGCCACACT+GGG | 0.457650 | 4:+92401331 | None:intergenic |
| ACCATTGTGGTGGGACTTGG+AGG | 0.458699 | 4:+92401244 | None:intergenic |
| ACTCTTATTATTATTATGGT+TGG | 0.463718 | 4:-92400564 | MsG0480024019.01.T01:three_prime_UTR |
| GATTGCTGGCCACACTGGGT+GGG | 0.464130 | 4:+92401335 | None:intergenic |
| TACCTGGAGGGTATGCGATT+AGG | 0.464838 | 4:+92401535 | None:intergenic |
| GCAGTGGGCTTGCAGGTCTG+TGG | 0.469723 | 4:+92400841 | None:intergenic |
| GGCTGCACCTTCGACGCATC+AGG | 0.474004 | 4:-92401198 | MsG0480024019.01.T01:CDS |
| ATTTATGTCATCTCATCTCA+TGG | 0.478066 | 4:-92400641 | MsG0480024019.01.T01:three_prime_UTR |
| GAAGAAGAGAGCGGTGAAGA+TGG | 0.478141 | 4:+92401566 | None:intergenic |
| AGATCCCTTGAAAGGTGTAA+TGG | 0.479072 | 4:+92401023 | None:intergenic |
| GAGAGATCCGCCGCAGTCTC+CGG | 0.481610 | 4:+92401158 | None:intergenic |
| AAGCATAAGAGTAAGCCTTT+GGG | 0.484229 | 4:+92400791 | None:intergenic |
| CAAGTCCCACCACAATGGTC+AGG | 0.493666 | 4:-92401240 | MsG0480024019.01.T01:CDS |
| AGGGAATAAGCTTTGTTTGG+TGG | 0.495351 | 4:+92401264 | None:intergenic |
| GGCCGTTTCTGGGGCCGTCA+CGG | 0.495582 | 4:-92401219 | MsG0480024019.01.T01:CDS |
| AGCCGTGACGGCCCCAGAAA+CGG | 0.498382 | 4:+92401217 | None:intergenic |
| TATTGCTGCACTGGTAACTT+TGG | 0.498988 | 4:-92400868 | MsG0480024019.01.T01:CDS |
| CCAGCAATCCAACCCGGTGC+CGG | 0.501469 | 4:-92401321 | MsG0480024019.01.T01:CDS |
| GTGCTGCTTTCAACTCTCCT+AGG | 0.501482 | 4:-92400891 | MsG0480024019.01.T01:CDS |
| TCTCTCTTCTGCAACGGCAT+AGG | 0.508531 | 4:-92401141 | MsG0480024019.01.T01:CDS |
| TTCCTAATCGCATACCCTCC+AGG | 0.509059 | 4:-92401537 | MsG0480024019.01.T01:intron |
| TCTCCTAGGTATTGCTGCAC+TGG | 0.513261 | 4:-92400877 | MsG0480024019.01.T01:CDS |
| GCCCAGTAGGGTTGCAGGTG+AGG | 0.513868 | 4:-92400954 | MsG0480024019.01.T01:CDS |
| TCTGGAAAATGTAGCTATGC+TGG | 0.515580 | 4:-92401003 | MsG0480024019.01.T01:CDS |
| GTGAACTCAGCGAGTGTGGC+TGG | 0.529115 | 4:+92401108 | None:intergenic |
| CTCTTCTGCAACGGCATAGG+CGG | 0.529119 | 4:-92401138 | MsG0480024019.01.T01:CDS |
| ACTCAGCGAGTGTGGCTGGT+GGG | 0.531396 | 4:+92401112 | None:intergenic |
| AGTGATCATGTAACTAGCAT+TGG | 0.535613 | 4:+92400738 | None:intergenic |
| CTCAGCGAGTGTGGCTGGTG+GGG | 0.539267 | 4:+92401113 | None:intergenic |
| CTTAACTTGATGTGCCCAGT+AGG | 0.539656 | 4:-92400967 | MsG0480024019.01.T01:CDS |
| TGGGAGGTTGAAGCCGCCGC+GGG | 0.541485 | 4:+92401284 | None:intergenic |
| AGTCTACATAACCACAAAAG+AGG | 0.544714 | 4:-92401620 | MsG0480024019.01.T01:five_prime_UTR |
| GTGCAAGTAGCAATACTGGT+AGG | 0.548800 | 4:+92400760 | None:intergenic |
| AAGATTCTTGAATAAGCAGT+GGG | 0.550542 | 4:+92400826 | None:intergenic |
| CGTCGAAGGTGCAGCCGTGA+CGG | 0.550989 | 4:+92401205 | None:intergenic |
| GTAAGTTGTAACCGTCGACC+AGG | 0.554402 | 4:+92401052 | None:intergenic |
| CCATGGTGTGATATTGGGAA+TGG | 0.563552 | 4:+92401595 | None:intergenic |
| AACTCAGCGAGTGTGGCTGG+TGG | 0.563622 | 4:+92401111 | None:intergenic |
| AGATTTCTATGACGTCAGCC+TGG | 0.567905 | 4:-92401070 | MsG0480024019.01.T01:CDS |
| CAATGGTCAGGCCGTTTCTG+GGG | 0.570580 | 4:-92401228 | MsG0480024019.01.T01:CDS |
| CTTCAAAACTGCTTGCCCAA+AGG | 0.572482 | 4:-92400806 | MsG0480024019.01.T01:CDS |
| GGTGAAGATGGAAGCAGCCA+TGG | 0.573489 | 4:+92401578 | None:intergenic |
| GAAGATTCTTGAATAAGCAG+TGG | 0.575322 | 4:+92400825 | None:intergenic |
| CATTGCGCCACCGGAGACTG+CGG | 0.577164 | 4:-92401168 | MsG0480024019.01.T01:CDS |
| GTGTGGCCAGCAATCCAACC+CGG | 0.580526 | 4:-92401327 | MsG0480024019.01.T01:CDS |
| ATGATCAACGGCGGTGACGA+GGG | 0.581144 | 4:+92400710 | None:intergenic |
| GCCGTGGCCTGATGCGTCGA+AGG | 0.582247 | 4:+92401191 | None:intergenic |
| TTAACTTGATGTGCCCAGTA+GGG | 0.582603 | 4:-92400966 | MsG0480024019.01.T01:CDS |
| AATAAGCTTTGTTTGGTGGG+AGG | 0.584207 | 4:+92401268 | None:intergenic |
| ACCTTCGACGCATCAGGCCA+CGG | 0.592438 | 4:-92401192 | MsG0480024019.01.T01:CDS |
| ATTTCCATTACACCTTTCAA+GGG | 0.595357 | 4:-92401027 | MsG0480024019.01.T01:CDS |
| GTGGGAGGTTGAAGCCGCCG+CGG | 0.600609 | 4:+92401283 | None:intergenic |
| TATGACGTCAGCCTGGTCGA+CGG | 0.603237 | 4:-92401063 | MsG0480024019.01.T01:CDS |
| GATGATCAACGGCGGTGACG+AGG | 0.606071 | 4:+92400709 | None:intergenic |
| GGCGGATCTCTCTTCTGCAA+CGG | 0.609526 | 4:-92401147 | MsG0480024019.01.T01:CDS |
| TGCAAGTAGCAATACTGGTA+GGG | 0.611972 | 4:+92400761 | None:intergenic |
| AAACGGCCTGACCATTGTGG+TGG | 0.613091 | 4:+92401234 | None:intergenic |
| TGCGCCACCGGAGACTGCGG+CGG | 0.616529 | 4:-92401165 | MsG0480024019.01.T01:CDS |
| AGTGGGCTTGCAGGTCTGTG+GGG | 0.617801 | 4:+92400843 | None:intergenic |
| TTACCAGTGCAGCAATACCT+AGG | 0.621497 | 4:+92400874 | None:intergenic |
| AGATCCGCCGCAGTCTCCGG+TGG | 0.621709 | 4:+92401161 | None:intergenic |
| CGTGACAAGAAGCAAGTGGT+GGG | 0.622854 | 4:-92400928 | MsG0480024019.01.T01:CDS |
| CAGAAACGGCCTGACCATTG+TGG | 0.626293 | 4:+92401231 | None:intergenic |
| AACGGCCTGACCATTGTGGT+GGG | 0.629227 | 4:+92401235 | None:intergenic |
| CCATTGTGGTGGGACTTGGA+GGG | 0.634133 | 4:+92401245 | None:intergenic |
| TAATGAAGATAGATGATCAA+CGG | 0.634704 | 4:+92400698 | None:intergenic |
| ACGTGACAAGAAGCAAGTGG+TGG | 0.639156 | 4:-92400929 | MsG0480024019.01.T01:CDS |
| GGAAAACCCATTCTGGCCCG+CGG | 0.640848 | 4:-92401300 | MsG0480024019.01.T01:CDS |
| AAATGTGAACTCAGCGAGTG+TGG | 0.640994 | 4:+92401104 | None:intergenic |
| CCCTCCAAGTCCCACCACAA+TGG | 0.642784 | 4:-92401245 | MsG0480024019.01.T01:CDS |
| AAACCCATTCTGGCCCGCGG+CGG | 0.643152 | 4:-92401297 | MsG0480024019.01.T01:CDS |
| GAAAGCAGCGAAGAAGAGAG+CGG | 0.656778 | 4:+92401557 | None:intergenic |
| ATAATAATAAAATACCTGGA+GGG | 0.657796 | 4:+92401523 | None:intergenic |
| ACAAGTGTCCCCACCCAGTG+TGG | 0.666782 | 4:-92401344 | MsG0480024019.01.T01:CDS |
| GTCACGTGACAAGAAGCAAG+TGG | 0.679782 | 4:-92400932 | MsG0480024019.01.T01:CDS |
| CCATTCCCAATATCACACCA+TGG | 0.722602 | 4:-92401595 | MsG0480024019.01.T01:exon |
| TGAAGATAGATGATCAACGG+CGG | 0.740375 | 4:+92400701 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAATAATAATAAAATACC+TGG | + | Chr4:92400642-92400661 | None:intergenic | 10.0% |
| !! | CATAAATATAAAGATGATAA+TGG | + | Chr4:92401504-92401523 | None:intergenic | 15.0% |
| !! | AATAATAATAAAATACCTGG+AGG | + | Chr4:92400639-92400658 | None:intergenic | 20.0% |
| !! | ACTCTTATTATTATTATGGT+TGG | - | Chr4:92401594-92401613 | MsG0480024019.01.T01:exon | 20.0% |
| !! | AGCAACTCTTATTATTATTA+TGG | - | Chr4:92401590-92401609 | MsG0480024019.01.T01:exon | 20.0% |
| !! | ATAATAATAAAATACCTGGA+GGG | + | Chr4:92400638-92400657 | None:intergenic | 20.0% |
| ! | AGAAACGACAAATTAAGTAA+CGG | + | Chr4:92400735-92400754 | None:intergenic | 25.0% |
| ! | TAATGAAGATAGATGATCAA+CGG | + | Chr4:92401463-92401482 | None:intergenic | 25.0% |
| !! | ATGGTTGGTTAAGTTTAATT+TGG | - | Chr4:92401609-92401628 | MsG0480024019.01.T01:five_prime_UTR | 25.0% |
| AAGATTCTTGAATAAGCAGT+GGG | + | Chr4:92401335-92401354 | None:intergenic | 30.0% | |
| ATTGAAGTAAAGAGACTTCT+AGG | + | Chr4:92401563-92401582 | None:intergenic | 30.0% | |
| ATTTATGTCATCTCATCTCA+TGG | - | Chr4:92401517-92401536 | MsG0480024019.01.T01:intron | 30.0% | |
| ATTTCCATTACACCTTTCAA+GGG | - | Chr4:92401131-92401150 | MsG0480024019.01.T01:CDS | 30.0% | |
| ! | TTGAAAGGTGTAATGGAAAT+CGG | + | Chr4:92401131-92401150 | None:intergenic | 30.0% |
| AAGCATAAGAGTAAGCCTTT+GGG | + | Chr4:92401370-92401389 | None:intergenic | 35.0% | |
| AGTCTACATAACCACAAAAG+AGG | - | Chr4:92400538-92400557 | MsG0480024019.01.T01:three_prime_UTR | 35.0% | |
| AGTGATCATGTAACTAGCAT+TGG | + | Chr4:92401423-92401442 | None:intergenic | 35.0% | |
| GAAGATTCTTGAATAAGCAG+TGG | + | Chr4:92401336-92401355 | None:intergenic | 35.0% | |
| GATTTCCATTACACCTTTCA+AGG | - | Chr4:92401130-92401149 | MsG0480024019.01.T01:CDS | 35.0% | |
| TAAGCATAAGAGTAAGCCTT+TGG | + | Chr4:92401371-92401390 | None:intergenic | 35.0% | |
| ATTACACCTTTCAAGGGATC+TGG | - | Chr4:92401137-92401156 | MsG0480024019.01.T01:CDS | 40.0% | |
| ATTGGTGCAAGTAGCAATAC+TGG | + | Chr4:92401405-92401424 | None:intergenic | 40.0% | |
| TCTGGAAAATGTAGCTATGC+TGG | - | Chr4:92401155-92401174 | MsG0480024019.01.T01:CDS | 40.0% | |
| TGAAGATAGATGATCAACGG+CGG | + | Chr4:92401460-92401479 | None:intergenic | 40.0% | |
| TGCAAGTAGCAATACTGGTA+GGG | + | Chr4:92401400-92401419 | None:intergenic | 40.0% | |
| ! | AGATCCCTTGAAAGGTGTAA+TGG | + | Chr4:92401138-92401157 | None:intergenic | 40.0% |
| ! | CATTTTCCAGATCCCTTGAA+AGG | + | Chr4:92401146-92401165 | None:intergenic | 40.0% |
| ! | TATTGCTGCACTGGTAACTT+TGG | - | Chr4:92401290-92401309 | MsG0480024019.01.T01:CDS | 40.0% |
| ! | TTAACTTGATGTGCCCAGTA+GGG | - | Chr4:92401192-92401211 | MsG0480024019.01.T01:CDS | 40.0% |
| !! | AATAAGCTTTGTTTGGTGGG+AGG | + | Chr4:92400893-92400912 | None:intergenic | 40.0% |
| !! | AGGGAATAAGCTTTGTTTGG+TGG | + | Chr4:92400897-92400916 | None:intergenic | 40.0% |
| !! | GGGAATAAGCTTTGTTTGGT+GGG | + | Chr4:92400896-92400915 | None:intergenic | 40.0% |
| !! | TGGAGGGAATAAGCTTTGTT+TGG | + | Chr4:92400900-92400919 | None:intergenic | 40.0% |
| AAATGTGAACTCAGCGAGTG+TGG | + | Chr4:92401057-92401076 | None:intergenic | 45.0% | |
| AAGCAGCCATGGTGTGATAT+TGG | + | Chr4:92400572-92400591 | None:intergenic | 45.0% | |
| ACACTCGCTGAGTTCACATT+TGG | - | Chr4:92401056-92401075 | MsG0480024019.01.T01:CDS | 45.0% | |
| AGATTTCTATGACGTCAGCC+TGG | - | Chr4:92401088-92401107 | MsG0480024019.01.T01:CDS | 45.0% | |
| AGCAGCCATGGTGTGATATT+GGG | + | Chr4:92400571-92400590 | None:intergenic | 45.0% | |
| CCATGGTGTGATATTGGGAA+TGG | + | Chr4:92400566-92400585 | None:intergenic | 45.0% | |
| CCATTCCCAATATCACACCA+TGG | - | Chr4:92400563-92400582 | MsG0480024019.01.T01:three_prime_UTR | 45.0% | |
| CTTCAAAACTGCTTGCCCAA+AGG | - | Chr4:92401352-92401371 | MsG0480024019.01.T01:CDS | 45.0% | |
| GTGCAAGTAGCAATACTGGT+AGG | + | Chr4:92401401-92401420 | None:intergenic | 45.0% | |
| TCTCACACACACACAGAAAG+CGG | - | Chr4:92400678-92400697 | MsG0480024019.01.T01:three_prime_UTR | 45.0% | |
| TGTGTGTGAGAGAGAAGAGA+AGG | + | Chr4:92400669-92400688 | None:intergenic | 45.0% | |
| TTACCAGTGCAGCAATACCT+AGG | + | Chr4:92401287-92401306 | None:intergenic | 45.0% | |
| ! | CTTAACTTGATGTGCCCAGT+AGG | - | Chr4:92401191-92401210 | MsG0480024019.01.T01:CDS | 45.0% |
| ! | TGGGAATGGAACCTCTTTTG+TGG | + | Chr4:92400552-92400571 | None:intergenic | 45.0% |
| ACAATGGTCAGGCCGTTTCT+GGG | - | Chr4:92400929-92400948 | MsG0480024019.01.T01:CDS | 50.0% | |
| ACGTGACAAGAAGCAAGTGG+TGG | - | Chr4:92401229-92401248 | MsG0480024019.01.T01:CDS | 50.0% | |
| CGTGACAAGAAGCAAGTGGT+GGG | - | Chr4:92401230-92401249 | MsG0480024019.01.T01:CDS | 50.0% | |
| GAAAGCAGCGAAGAAGAGAG+CGG | + | Chr4:92400604-92400623 | None:intergenic | 50.0% | |
| GAAGAAGAGAGCGGTGAAGA+TGG | + | Chr4:92400595-92400614 | None:intergenic | 50.0% | |
| GTAAGTTGTAACCGTCGACC+AGG | + | Chr4:92401109-92401128 | None:intergenic | 50.0% | |
| GTCACGTGACAAGAAGCAAG+TGG | - | Chr4:92401226-92401245 | MsG0480024019.01.T01:CDS | 50.0% | |
| GTGTGAGAGAGAAGAGAAGG+AGG | + | Chr4:92400666-92400685 | None:intergenic | 50.0% | |
| TCTCTCTTCTGCAACGGCAT+AGG | - | Chr4:92401017-92401036 | MsG0480024019.01.T01:CDS | 50.0% | |
| TTCCTAATCGCATACCCTCC+AGG | - | Chr4:92400621-92400640 | MsG0480024019.01.T01:three_prime_UTR | 50.0% | |
| ! | TACCTGGAGGGTATGCGATT+AGG | + | Chr4:92400626-92400645 | None:intergenic | 50.0% |
| ! | TCTCCTAGGTATTGCTGCAC+TGG | - | Chr4:92401281-92401300 | MsG0480024019.01.T01:CDS | 50.0% |
| ! | TGAATAAGCAGTGGGCTTGC+AGG | + | Chr4:92401327-92401346 | None:intergenic | 50.0% |
| !! | GTGCTGCTTTCAACTCTCCT+AGG | - | Chr4:92401267-92401286 | MsG0480024019.01.T01:CDS | 50.0% |
| AAACGGCCTGACCATTGTGG+TGG | + | Chr4:92400927-92400946 | None:intergenic | 55.0% | |
| AACGGCCTGACCATTGTGGT+GGG | + | Chr4:92400926-92400945 | None:intergenic | 55.0% | |
| ACCTCACCTGCAACCCTACT+GGG | + | Chr4:92401208-92401227 | None:intergenic | 55.0% | |
| ATGATCAACGGCGGTGACGA+GGG | + | Chr4:92401451-92401470 | None:intergenic | 55.0% | |
| CAAGTCCCACCACAATGGTC+AGG | - | Chr4:92400918-92400937 | MsG0480024019.01.T01:CDS | 55.0% | |
| CAATGGTCAGGCCGTTTCTG+GGG | - | Chr4:92400930-92400949 | MsG0480024019.01.T01:CDS | 55.0% | |
| CACAATGGTCAGGCCGTTTC+TGG | - | Chr4:92400928-92400947 | MsG0480024019.01.T01:CDS | 55.0% | |
| CAGAAACGGCCTGACCATTG+TGG | + | Chr4:92400930-92400949 | None:intergenic | 55.0% | |
| CTCTTCTGCAACGGCATAGG+CGG | - | Chr4:92401020-92401039 | MsG0480024019.01.T01:CDS | 55.0% | |
| GGCGGATCTCTCTTCTGCAA+CGG | - | Chr4:92401011-92401030 | MsG0480024019.01.T01:CDS | 55.0% | |
| GGTGAAGATGGAAGCAGCCA+TGG | + | Chr4:92400583-92400602 | None:intergenic | 55.0% | |
| GTTGGATTGCTGGCCACACT+GGG | + | Chr4:92400830-92400849 | None:intergenic | 55.0% | |
| TATGACGTCAGCCTGGTCGA+CGG | - | Chr4:92401095-92401114 | MsG0480024019.01.T01:CDS | 55.0% | |
| ! | ACCATTGTGGTGGGACTTGG+AGG | + | Chr4:92400917-92400936 | None:intergenic | 55.0% |
| ! | CCATTGTGGTGGGACTTGGA+GGG | + | Chr4:92400916-92400935 | None:intergenic | 55.0% |
| ! | CTGACCATTGTGGTGGGACT+TGG | + | Chr4:92400920-92400939 | None:intergenic | 55.0% |
| !! | AGAATGGGTTTTCCGGCACC+GGG | + | Chr4:92400852-92400871 | None:intergenic | 55.0% |
| !! | CAGAATGGGTTTTCCGGCAC+CGG | + | Chr4:92400853-92400872 | None:intergenic | 55.0% |
| AACTCAGCGAGTGTGGCTGG+TGG | + | Chr4:92401050-92401069 | None:intergenic | 60.0% | |
| ACAAGTGTCCCCACCCAGTG+TGG | - | Chr4:92400814-92400833 | MsG0480024019.01.T01:CDS | 60.0% | |
| ACCTTCGACGCATCAGGCCA+CGG | - | Chr4:92400966-92400985 | MsG0480024019.01.T01:CDS | 60.0% | |
| ACTCAGCGAGTGTGGCTGGT+GGG | + | Chr4:92401049-92401068 | None:intergenic | 60.0% | |
| ATTGCTGGCCACACTGGGTG+GGG | + | Chr4:92400825-92400844 | None:intergenic | 60.0% | |
| CCCTCCAAGTCCCACCACAA+TGG | - | Chr4:92400913-92400932 | MsG0480024019.01.T01:CDS | 60.0% | |
| GACCTCACCTGCAACCCTAC+TGG | + | Chr4:92401209-92401228 | None:intergenic | 60.0% | |
| GATGATCAACGGCGGTGACG+AGG | + | Chr4:92401452-92401471 | None:intergenic | 60.0% | |
| GATGTGCCCAGTAGGGTTGC+AGG | - | Chr4:92401199-92401218 | MsG0480024019.01.T01:CDS | 60.0% | |
| GATTGCTGGCCACACTGGGT+GGG | + | Chr4:92400826-92400845 | None:intergenic | 60.0% | |
| GGAAAACCCATTCTGGCCCG+CGG | - | Chr4:92400858-92400877 | MsG0480024019.01.T01:CDS | 60.0% | |
| GGTTGGATTGCTGGCCACAC+TGG | + | Chr4:92400831-92400850 | None:intergenic | 60.0% | |
| GTGAACTCAGCGAGTGTGGC+TGG | + | Chr4:92401053-92401072 | None:intergenic | 60.0% | |
| GTGTGGCCAGCAATCCAACC+CGG | - | Chr4:92400831-92400850 | MsG0480024019.01.T01:CDS | 60.0% | |
| ! | AGTGGGCTTGCAGGTCTGTG+GGG | + | Chr4:92401318-92401337 | None:intergenic | 60.0% |
| ! | CAGTGGGCTTGCAGGTCTGT+GGG | + | Chr4:92401319-92401338 | None:intergenic | 60.0% |
| ! | CGGTGCCGGAAAACCCATTC+TGG | - | Chr4:92400851-92400870 | MsG0480024019.01.T01:CDS | 60.0% |
| !! | GCGGGCCAGAATGGGTTTTC+CGG | + | Chr4:92400859-92400878 | None:intergenic | 60.0% |
| AAACCCATTCTGGCCCGCGG+CGG | - | Chr4:92400861-92400880 | MsG0480024019.01.T01:CDS | 65.0% | |
| AGCCGTGACGGCCCCAGAAA+CGG | + | Chr4:92400944-92400963 | None:intergenic | 65.0% | |
| CATTGCGCCACCGGAGACTG+CGG | - | Chr4:92400990-92401009 | MsG0480024019.01.T01:CDS | 65.0% | |
| CCAGCAATCCAACCCGGTGC+CGG | - | Chr4:92400837-92400856 | MsG0480024019.01.T01:CDS | 65.0% | |
| CTCAGCGAGTGTGGCTGGTG+GGG | + | Chr4:92401048-92401067 | None:intergenic | 65.0% | |
| GAGAGATCCGCCGCAGTCTC+CGG | + | Chr4:92401003-92401022 | None:intergenic | 65.0% | |
| GCCCAGTAGGGTTGCAGGTG+AGG | - | Chr4:92401204-92401223 | MsG0480024019.01.T01:CDS | 65.0% | |
| GGATTGCTGGCCACACTGGG+TGG | + | Chr4:92400827-92400846 | None:intergenic | 65.0% | |
| GGCTGCACCTTCGACGCATC+AGG | - | Chr4:92400960-92400979 | MsG0480024019.01.T01:CDS | 65.0% | |
| ! | CGTCGAAGGTGCAGCCGTGA+CGG | + | Chr4:92400956-92400975 | None:intergenic | 65.0% |
| ! | GCAGTGGGCTTGCAGGTCTG+TGG | + | Chr4:92401320-92401339 | None:intergenic | 65.0% |
| !! | TGGGTTTTCCGGCACCGGGT+TGG | + | Chr4:92400848-92400867 | None:intergenic | 65.0% |
| AAGCCGCCGCGGGCCAGAAT+GGG | + | Chr4:92400867-92400886 | None:intergenic | 70.0% | |
| AGATCCGCCGCAGTCTCCGG+TGG | + | Chr4:92401000-92401019 | None:intergenic | 70.0% | |
| CGCAGTCTCCGGTGGCGCAA+TGG | + | Chr4:92400992-92401011 | None:intergenic | 70.0% | |
| GCCGTGGCCTGATGCGTCGA+AGG | + | Chr4:92400970-92400989 | None:intergenic | 70.0% | |
| GTGGGAGGTTGAAGCCGCCG+CGG | + | Chr4:92400878-92400897 | None:intergenic | 70.0% | |
| TGGGAGGTTGAAGCCGCCGC+GGG | + | Chr4:92400877-92400896 | None:intergenic | 70.0% | |
| ! | CCGGCACCGGGTTGGATTGC+TGG | + | Chr4:92400840-92400859 | None:intergenic | 70.0% |
| !! | GGCCGTTTCTGGGGCCGTCA+CGG | - | Chr4:92400939-92400958 | MsG0480024019.01.T01:CDS | 70.0% |
| CTCCGGTGGCGCAATGGCCG+TGG | + | Chr4:92400986-92401005 | None:intergenic | 75.0% | |
| GAAGCCGCCGCGGGCCAGAA+TGG | + | Chr4:92400868-92400887 | None:intergenic | 75.0% | |
| GGCCACGGCCATTGCGCCAC+CGG | - | Chr4:92400981-92401000 | MsG0480024019.01.T01:CDS | 75.0% | |
| TGCGCCACCGGAGACTGCGG+CGG | - | Chr4:92400993-92401012 | MsG0480024019.01.T01:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 92400536 | 92401644 | 92400536 | ID=MsG0480024019.01;Name=MsG0480024019.01 |
| Chr4 | mRNA | 92400536 | 92401644 | 92400536 | ID=MsG0480024019.01.T01;Parent=MsG0480024019.01;Name=MsG0480024019.01.T01;_AED=0.21;_eAED=0.21;_QI=46|1|1|1|1|1|2|178|250 |
| Chr4 | exon | 92400536 | 92401405 | 92400536 | ID=MsG0480024019.01.T01:exon:34140;Parent=MsG0480024019.01.T01 |
| Chr4 | exon | 92401538 | 92401644 | 92401538 | ID=MsG0480024019.01.T01:exon:34139;Parent=MsG0480024019.01.T01 |
| Chr4 | five_prime_UTR | 92401599 | 92401644 | 92401599 | ID=MsG0480024019.01.T01:five_prime_utr;Parent=MsG0480024019.01.T01 |
| Chr4 | CDS | 92401538 | 92401598 | 92401538 | ID=MsG0480024019.01.T01:cds;Parent=MsG0480024019.01.T01 |
| Chr4 | CDS | 92400714 | 92401405 | 92400714 | ID=MsG0480024019.01.T01:cds;Parent=MsG0480024019.01.T01 |
| Chr4 | three_prime_UTR | 92400536 | 92400713 | 92400536 | ID=MsG0480024019.01.T01:three_prime_utr;Parent=MsG0480024019.01.T01 |
| Gene Sequence |
| Protein sequence |
